Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0015335

Physical Location & Seq

Genomic Coordinates Forward (+)

18749576 .. 18751414

Gene Structure 1839 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G017350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGACCACCACCTCTACCTCCCCGTGGAACTCTCGCTTAAGAGAGCTCGCAAAGCAATGCCTCTTCTCCGATGCTCTCACTCTTTACCGCCAAATGCTCCGATTCGGCCACCCACCCAACGCTTTCACTTTCCCCTTCGCTCTCAAATCCTGCGCCGCCCTCTCCCTCCCTCTCACCGGTTCGCTCCTCCATTCCCACGTCGTCAAAACCGGGTGCGGGCCCGACCCCTTCGTACAAACTTCTTTGGTTTCCATGTACTGTAAATGCTGCTCGACCGATGACGCACGCAAGGTGTTCGATGAAAATCCCCACTCGAGGCATCTGACTGTTTGCTACAATGCTTTGATATCTGGGCATGCTTCGAATTCGAAGTTTCGTGATGCGGTTTCGTTGTTTCGTCGAATGAGGGAGGAGGGCGTGGAGGTTAATTCAGTTACCATGCTGGGTTTGATTCCGGGGTGCGTGGCTCCGGTGCATTTGGGTCTTGGGATGTGCCTTCATGGTTCTAGTGTGAAGTGCGGTTTCGACGTTGATTTGTCTGTGAGGAATTGTTTGCTTACAATGTATGTGAAATGCGGGTCGCTAGATAATGCAAGGAAGATCTTTGATGCAATGCCGGAAAAGGAATGGGCTTGCTACTCATGTTTTGAATCTGTACAGGAGATGGAATCTTGTGGTGTTTGCCCTGATCCTGTGACGCTTGTTGGCGTTCTATCGTCGTGTACTCACCTTGGTGCGCATGGCGTTGGATGTGAGGTAGAAAGACGGATAGAGTCTAGTGGATTTGGTTCCAATCCGTATTTGAAAAATGCTCTGATCAATATGTACGCTAGGTGTGGTAATTTGGTGAAGGCTCATGCTATTTTTGATGTCATGCCTGAAAAAAGCTTAGTTTCTTGGACAGCGATTATCGGTGGGTATGGGATGCACGGACATGGAGAGATTGCATTGGAGCTCTTCGAGGAAATGATCGCGACTGGAATCAGGCCTGACAAAGCCATGTTTGTGACTGTTTTGTCTGCCTGTAGCCATGCAGGATTGACTGATGAGGGACTGGAGTGTTTTGCTGCAATGGAGAAAAACTATAGGTTGCAGCCTGGGCCAGAGCATTATTCTTGCATGGTGGATCTTTTAGGGCGTGCAGGTCGGCTTAAAGAAGCAAAAGAGCTAATTGACTCGATGCAGGTAAAGCCTGATGGTGGAGTATGGGGAGCCCTTTTGGGTGCCTGTAAAATACATAAAAATCTAGAACCAACTAATAGTGGTTATTATGTGTTGATGTCAAATATATACTCTGATGCAAATAATCTAGAAGGGGTTTTAAAGGTTCGGGTTATGATGAAGGAGAGGCAGCTCAAAAAGGAGCCAGGGTGTAGCTATGTTGAGTGTAAGGAAGACCATTGTCAGACAGAAGATATATACAGCATATTGGAGGAGTTAGAAAATTCAGCCAGGGAACCTGGCGCGTCCAATGAGAATGAAGGAGAAAGAAACAAAGAGCAAGTAATTGGTGTTGGTGTTCACAGTGAAAAATTGGCAATTGCATTTGGGCTCTTGAACACTGAACCAGGGACTGAGATCGTAGTGATAAAGAACCTAAGGGTGTGTGGAGACTGCCACTTGTTTATCAAGTCGATTAGCAAGATTGTGGATCGTCAGTTTGTGGTCAGAGATGCTACTCGTTTTCACCATTTCAGAAATGGGATTTGTTCTTGTAAAGACTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

576

Amino Acids

63.55

Weight (kDa)

6.32

Isoelectric Point (pI)

38.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	109 - 155	2e-10	PPR repeat family
PPR	PF01535	110 - 140	9.1e-08	PPR repeat
PPR_2	PF13041	296 - 343	4.3e-08	PPR repeat family
PPR	PF01535	298 - 327	3e-06	PPR repeat
E_motif	PF20431	409 - 462	5.5e-14	E motif
DYW_deaminase	PF14432	499 - 576	4.5e-33	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11460
fragaria_vesca	FvH4_6g19130
malus_domestica	MD14G1027300.v1.1
prunus_persica	Prupe.7G104400_v2.0.a1
pyrus_communis	pycom14g02600
rosa_chinensis	RchiOBHm_Chr3g0474241
rosa_laevigata	RLG00000023936 RLG00000023939
rosa_multiflora	Rmu_sc0004507.1_g000021 Rmu_sc0015051.1_g000006
rosa_roxburghii	Rroxscaffold_6G00407410
rosa_rugosa	Rorug03G0139800
rosa_samantha	Rh3AG190200 Rh3BG219500 Rh3DG215000
rosa_wichuraiana	Rw3G017350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1015
Acc16I	TGCGCA	1 cut(s)	738
Acc36I	ACCTGC	2 cut(s)	1133, 1174
AccB1I	GGYRCC	1 cut(s)	1223
AccII	CGCG	2 cut(s)	974, 1466
AciI	CCGC	6 cut(s)	88, 156, 216, 383, 519, 576
AclWI	GGATC	3 cut(s)	683, 1134, 1659
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	2 cut(s)	364, 1444
AfaI	GTAC	5 cut(s)	234, 257, 657, 724, 827
AfiI	CCNNNNNNNGG	5 cut(s)	24, 176, 216, 315, 1199
AflII	CTTAAG	1 cut(s)	37
AgeI	ACCGGT	1 cut(s)	176
AgsI	TTSAA	3 cut(s)	650, 805, 1558
AjiI	CACGTC	1 cut(s)	199
AjnI	CCWGG	5 cut(s)	1096, 1366, 1451, 1459, 1567
AleI	CACNNNNGTG	1 cut(s)	732
AluBI	AGCT	6 cut(s)	46, 888, 955, 1168, 1354, 1377
AluI	AGCT	6 cut(s)	46, 888, 955, 1168, 1354, 1377
Alw21I	GWGCWC	2 cut(s)	48, 957
Alw26I	GTCTC	1 cut(s)	1605
AlwI	GGATC	3 cut(s)	683, 1134, 1659
AlwNI	CAGNNNCTG	1 cut(s)	1574
Ama87I	CYCGRG	1 cut(s)	313
AoxI	GGCC	4 cut(s)	106, 218, 986, 1100
ApaI	GGGCCC	1 cut(s)	222
ApeKI	GCWGC	4 cut(s)	267, 1067, 1093, 1351
ApoI	RAATTY	2 cut(s)	364, 1444
AsiGI	ACCGGT	1 cut(s)	176
AspLEI	GCGC	3 cut(s)	155, 739, 1466
AspS9I	GGNCC	3 cut(s)	218, 219, 1100
AsuC2I	CCSGG	2 cut(s)	211, 456
AsuHPI	GGTGA	4 cut(s)	166, 719, 859, 1679
AsuII	TTCGAA	2 cut(s)	362, 368
AvaI	CYCGRG	1 cut(s)	313
AxyI	CCTNAGG	1 cut(s)	1598
BaeGI	GKGCMC	1 cut(s)	222
BanI	GGYRCC	1 cut(s)	1223
BanII	GRGCYC	5 cut(s)	48, 222, 957, 1216, 1554
BbsI	GAAGAC	1 cut(s)	1401
Bbv12I	GWGCWC	2 cut(s)	48, 957
BbvI	GCAGC	4 cut(s)	254, 1054, 1105, 1363
BccI	CCATC	2 cut(s)	658, 1190
BcgI	CGANNNNNNTGC	2 cut(s)	277, 311
BciT130I	CCWGG	5 cut(s)	1098, 1368, 1453, 1461, 1569
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	2 cut(s)	211, 456
BcoDI	GTCTC	1 cut(s)	1605
BfaI	CTAG	6 cut(s)	507, 584, 777, 831, 1247, 1310
BfmI	CTRYAG	2 cut(s)	1024, 1084
BfrI	CTTAAG	1 cut(s)	37
BfuAI	ACCTGC	2 cut(s)	1133, 1174
BglII	AGATCT	1 cut(s)	600
BisI	GCNGC	5 cut(s)	156, 268, 1068, 1094, 1352
BlsI	GCNGC	5 cut(s)	157, 269, 1069, 1095, 1353
Bme1390I	CCNGG	7 cut(s)	211, 456, 1098, 1368, 1453, 1461, 1569
BmeT110I	CYCGRG	1 cut(s)	313
BmgBI	CACGTC	1 cut(s)	199
BmgT120I	GGNCC	3 cut(s)	218, 219, 1100
BmiI	GGNNCC	7 cut(s)	220, 468, 790, 1213, 1225, 1365, 1458
BmrFI	CCNGG	7 cut(s)	211, 456, 1098, 1368, 1453, 1461, 1569
BmsI	GCATC	8 cut(s)	61, 328, 370, 598, 915, 1170, 1288, 1663
BoxI	GACNNNNGTC	1 cut(s)	1401
BpiI	GAAGAC	1 cut(s)	1401
BpmI	CTGGAG	1 cut(s)	1076
Bpu14I	TTCGAA	2 cut(s)	362, 368
BpuMI	CCSGG	2 cut(s)	211, 456
BsaBI	GATNNNNATC	1 cut(s)	303
BsaJI	CCNNGG	7 cut(s)	23, 455, 730, 1097, 1367, 1452, 1568
BsaWI	WCCGGW	2 cut(s)	176, 469
BsaXI	ACNNNNNCTCC	2 cut(s)	1355, 1385
Bsc4I	CCNNNNNNNGG	5 cut(s)	24, 176, 216, 315, 1199
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	3 cut(s)	982, 1059, 1730
Bse21I	CCTNAGG	1 cut(s)	1598
Bse3DI	GCAATG	3 cut(s)	62, 618, 1077
Bse8I	GATNNNNATC	1 cut(s)	303
BseBI	CCWGG	5 cut(s)	1098, 1368, 1453, 1461, 1569
BseDI	CCNNGG	7 cut(s)	23, 455, 730, 1097, 1367, 1452, 1568
BseGI	GGATG	3 cut(s)	495, 755, 930
BseJI	GATNNNNATC	1 cut(s)	303
BseLI	CCNNNNNNNGG	5 cut(s)	24, 176, 216, 315, 1199
BseMI	GCAATG	3 cut(s)	62, 618, 1077
BseMII	CTCAG	1 cut(s)	1566
BseNI	ACTGG	3 cut(s)	982, 1059, 1730
BseRI	GAGGAG	3 cut(s)	176, 425, 1448
BseSI	GKGCMC	1 cut(s)	222
BseXI	GCAGC	4 cut(s)	254, 1054, 1105, 1363
BseYI	CCCAGC	1 cut(s)	442
BsgI	GTGCAG	1 cut(s)	1161
Bsh1236I	CGCG	2 cut(s)	974, 1466
Bsh1285I	CGRYCG	1 cut(s)	276
BshFI	GGCC	4 cut(s)	108, 220, 988, 1102
BshNI	GGYRCC	1 cut(s)	1223
BshTI	ACCGGT	1 cut(s)	176
BsiEI	CGRYCG	1 cut(s)	276
BsiHKAI	GWGCWC	2 cut(s)	48, 957
BsiHKCI	CYCGRG	1 cut(s)	313
BsiSI	CCGG	5 cut(s)	177, 210, 455, 470, 617
BslFI	GGGAC	2 cut(s)	1065, 1585
BslI	CCNNNNNNNGG	5 cut(s)	24, 176, 216, 315, 1199
BsmAI	GTCTC	1 cut(s)	1605
BsmFI	GGGAC	2 cut(s)	1065, 1585
BsnI	GGCC	4 cut(s)	108, 220, 988, 1102
BsoBI	CYCGRG	1 cut(s)	313
Bsp119I	TTCGAA	2 cut(s)	362, 368
Bsp120I	GGGCCC	1 cut(s)	218
Bsp1286I	GDGCHC	5 cut(s)	48, 222, 957, 1216, 1554
Bsp1407I	TGTACA	1 cut(s)	655
Bsp143I	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
Bsp68I	TCGCGA	1 cut(s)	974
BspACI	CCGC	6 cut(s)	88, 156, 216, 383, 519, 576
BspANI	GGCC	4 cut(s)	108, 220, 988, 1102
BspCNI	CTCAG	1 cut(s)	1567
BspFNI	CGCG	2 cut(s)	974, 1466
BspLI	GGNNCC	7 cut(s)	220, 468, 790, 1213, 1225, 1365, 1458
BspMI	ACCTGC	2 cut(s)	1133, 1174
BspPI	GGATC	3 cut(s)	683, 1134, 1659
BspQI	GCTCTTC	1 cut(s)	962
BspT104I	TTCGAA	2 cut(s)	362, 368
BspT107I	GGYRCC	1 cut(s)	1223
BspTI	CTTAAG	1 cut(s)	37
BsrDI	GCAATG	3 cut(s)	62, 618, 1077
BsrFI	RCCGGY	1 cut(s)	176
BsrGI	TGTACA	1 cut(s)	655
BsrI	ACTGG	3 cut(s)	982, 1059, 1730
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	7 cut(s)	23, 455, 730, 1097, 1367, 1452, 1568
BssMI	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
BssT1I	CCWWGG	1 cut(s)	730
Bst2UI	CCWGG	5 cut(s)	1098, 1368, 1453, 1461, 1569
Bst4CI	ACNGT	4 cut(s)	260, 328, 1012, 1526
Bst6I	CTCTTC	2 cut(s)	68, 962
BstAFI	CTTAAG	1 cut(s)	37
BstAUI	TGTACA	1 cut(s)	655
BstBI	TTCGAA	2 cut(s)	362, 368
BstC8I	GCNNGC	6 cut(s)	48, 218, 286, 357, 634, 1140
BstDEI	CTNAG	3 cut(s)	889, 1575, 1598
BstDSI	CCRYGG	1 cut(s)	23
BstF5I	GGATG	3 cut(s)	495, 755, 930
BstFNI	CGCG	2 cut(s)	974, 1466
BstHHI	GCGC	3 cut(s)	155, 739, 1466
BstKTI	GATC	7 cut(s)	603, 691, 819, 972, 1129, 1581, 1654
BstMAI	GTCTC	1 cut(s)	1605
BstMBI	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
BstMCI	CGRYCG	1 cut(s)	276
BstMWI	GCNNNNNNNGC	3 cut(s)	52, 1099, 1189
BstNI	CCWGG	5 cut(s)	1098, 1368, 1453, 1461, 1569
BstNSI	RCATGY	1 cut(s)	359
BstPAI	GACNNNNGTC	1 cut(s)	1401
BstSCI	CCNGG	7 cut(s)	209, 454, 1096, 1366, 1451, 1459, 1567
BstSFI	CTRYAG	2 cut(s)	1024, 1084
BstSLI	GKGCMC	1 cut(s)	222
BstUI	CGCG	2 cut(s)	974, 1466
BstV1I	GCAGC	4 cut(s)	254, 1054, 1105, 1363
BstV2I	GAAGAC	1 cut(s)	1401
BstX2I	RGATCY	2 cut(s)	600, 1126
BstYI	RGATCY	2 cut(s)	600, 1126
Bsu36I	CCTNAGG	1 cut(s)	1598
BsuRI	GGCC	4 cut(s)	108, 220, 988, 1102
BtgI	CCRYGG	1 cut(s)	23
BtrI	CACGTC	1 cut(s)	199
BtsCI	GGATG	3 cut(s)	495, 755, 930
BtsIMutI	CAGTG	2 cut(s)	1531, 1560
BtuMI	TCGCGA	1 cut(s)	974
BveI	ACCTGC	2 cut(s)	1133, 1174
Cac8I	GCNNGC	6 cut(s)	48, 218, 286, 357, 634, 1140
CaiI	CAGNNNCTG	1 cut(s)	1574
CfoI	GCGC	3 cut(s)	155, 739, 1466
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	3 cut(s)	218, 219, 1100
CseI	GACGC	3 cut(s)	290, 706, 1455
Csp6I	GTAC	5 cut(s)	233, 256, 656, 723, 826
CspAI	ACCGGT	1 cut(s)	176
CviQI	GTAC	5 cut(s)	233, 256, 656, 723, 826
DdeI	CTNAG	3 cut(s)	889, 1575, 1598
DpnI	GATC	7 cut(s)	602, 690, 818, 971, 1128, 1580, 1653
DpnII	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
DraI	TTTAAA	1 cut(s)	1323
DrdI	GACNNNNNNGTC	1 cut(s)	1015
DseDI	GACNNNNNNGTC	1 cut(s)	1015
EaeI	YGGCCR	1 cut(s)	106
Eam1104I	CTCTTC	2 cut(s)	68, 962
EarI	CTCTTC	2 cut(s)	68, 962
Ecl136II	GAGCTC	2 cut(s)	46, 955
Eco130I	CCWWGG	1 cut(s)	730
Eco147I	AGGCCT	1 cut(s)	988
Eco24I	GRGCYC	5 cut(s)	48, 222, 957, 1216, 1554
Eco32I	GATATC	1 cut(s)	348
Eco53kI	GAGCTC	2 cut(s)	46, 955
Eco81I	CCTNAGG	1 cut(s)	1598
Eco88I	CYCGRG	1 cut(s)	313
EcoICRI	GAGCTC	2 cut(s)	46, 955
EcoRI	GAATTC	1 cut(s)	364
EcoRII	CCWGG	5 cut(s)	1096, 1366, 1451, 1459, 1567
EcoRV	GATATC	1 cut(s)	348
EcoT14I	CCWWGG	1 cut(s)	730
EcoT38I	GRGCYC	5 cut(s)	48, 222, 957, 1216, 1554
ErhI	CCWWGG	1 cut(s)	730
FaqI	GGGAC	2 cut(s)	1065, 1585
FauI	CCCGC	2 cut(s)	209, 569
FbaI	TGATCA	1 cut(s)	816
Fnu4HI	GCNGC	5 cut(s)	156, 268, 1068, 1094, 1352
FokI	GGATG	3 cut(s)	502, 762, 937
FriOI	GRGCYC	5 cut(s)	48, 222, 957, 1216, 1554
Fsp4HI	GCNGC	5 cut(s)	156, 268, 1068, 1094, 1352
FspAI	RTGCGCAY	1 cut(s)	738
FspBI	CTAG	6 cut(s)	507, 584, 777, 831, 1247, 1310
FspI	TGCGCA	1 cut(s)	738
GlaI	GCGC	3 cut(s)	154, 738, 1465
GluI	GCNGC	5 cut(s)	156, 268, 1068, 1094, 1352
GsaI	CCCAGC	1 cut(s)	446
GsuI	CTGGAG	1 cut(s)	1076
HaeIII	GGCC	4 cut(s)	108, 220, 988, 1102
HapII	CCGG	5 cut(s)	177, 210, 455, 470, 617
HgaI	GACGC	3 cut(s)	290, 706, 1455
HhaI	GCGC	3 cut(s)	155, 739, 1466
Hin6I	GCGC	3 cut(s)	153, 737, 1464
HinP1I	GCGC	3 cut(s)	153, 737, 1464
HindIII	AAGCTT	1 cut(s)	886
HinfI	GANTC	7 cut(s)	102, 451, 650, 668, 773, 981, 1175
HpaII	CCGG	5 cut(s)	177, 210, 455, 470, 617
HphI	GGTGA	4 cut(s)	166, 719, 859, 1679
Hpy166II	GTNNAC	2 cut(s)	723, 1522
Hpy188I	TCNGA	8 cut(s)	70, 101, 324, 816, 1297, 1407, 1670, 1697
Hpy188III	TCNNGA	5 cut(s)	377, 973, 1247, 1310, 1555
Hpy8I	GTNNAC	2 cut(s)	723, 1522
Hpy99I	CGWCG	4 cut(s)	203, 402, 530, 721
HpyAV	CCTTC	7 cut(s)	145, 238, 506, 844, 1307, 1336, 1475
HpyCH4III	ACNGT	4 cut(s)	260, 328, 1012, 1526
HpyCH4IV	ACGT	2 cut(s)	198, 528
HpyF10VI	GCNNNNNNNGC	3 cut(s)	52, 1099, 1189
HpyF3I	CTNAG	3 cut(s)	889, 1575, 1598
HpySE526I	ACGT	2 cut(s)	198, 528
HspAI	GCGC	3 cut(s)	153, 737, 1464
Ksp22I	TGATCA	1 cut(s)	816
Kzo9I	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
LguI	GCTCTTC	1 cut(s)	962
LmnI	GCTCC	6 cut(s)	102, 189, 472, 952, 1211, 1363
Lsp1109I	GCAGC	4 cut(s)	254, 1054, 1105, 1363
LweI	GCATC	8 cut(s)	61, 328, 370, 598, 915, 1170, 1288, 1663
MaeI	CTAG	6 cut(s)	507, 584, 777, 831, 1247, 1310
MaeII	ACGT	2 cut(s)	198, 528
MaeIII	GTNAC	3 cut(s)	433, 694, 1006
MalI	GATC	7 cut(s)	602, 690, 818, 971, 1128, 1580, 1653
MboI	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
MboII	GAAGA	5 cut(s)	55, 610, 949, 1406, 1424
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	2 cut(s)	600, 1126
MhlI	GDGCHC	5 cut(s)	48, 222, 957, 1216, 1554
MluCI	AATT	9 cut(s)	364, 427, 547, 841, 1170, 1444, 1506, 1532, 1539
MlyI	GAGTC	2 cut(s)	782, 1169
MmeI	TCCRAC	1 cut(s)	727
MseI	TTAA	4 cut(s)	38, 426, 1152, 1322
MslI	CAYNNNNRTG	3 cut(s)	732, 933, 1004
MspCI	CTTAAG	1 cut(s)	37
MspI	CCGG	5 cut(s)	177, 210, 455, 470, 617
MspR9I	CCNGG	7 cut(s)	211, 456, 1098, 1368, 1453, 1461, 1569
MunI	CAATTG	1 cut(s)	1539
MvaI	CCWGG	5 cut(s)	1098, 1368, 1453, 1461, 1569
MvnI	CGCG	2 cut(s)	974, 1466
MwoI	GCNNNNNNNGC	3 cut(s)	52, 1099, 1189
NciI	CCSGG	2 cut(s)	211, 456
NdeII	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
NlaIV	GGNNCC	7 cut(s)	220, 468, 790, 1213, 1225, 1365, 1458
NmuCI	GTSAC	2 cut(s)	694, 1006
NruI	TCGCGA	1 cut(s)	974
NsbI	TGCGCA	1 cut(s)	738
NspI	RCATGY	1 cut(s)	359
NspV	TTCGAA	2 cut(s)	362, 368
OliI	CACNNNNGTG	1 cut(s)	732
PaeI	GCATGC	1 cut(s)	359
PaeR7I	CTCGAG	1 cut(s)	313
PceI	AGGCCT	1 cut(s)	988
PciSI	GCTCTTC	1 cut(s)	962
PfeI	GAWTC	5 cut(s)	102, 451, 650, 668, 981
PinAI	ACCGGT	1 cut(s)	176
PkrI	GCNGC	5 cut(s)	157, 269, 1069, 1095, 1353
PleI	GAGTC	2 cut(s)	781, 1169
PpsI	GAGTC	2 cut(s)	781, 1169
PshAI	GACNNNNGTC	1 cut(s)	1401
Psp124BI	GAGCTC	2 cut(s)	48, 957
Psp6I	CCWGG	5 cut(s)	1096, 1366, 1451, 1459, 1567
PspFI	CCCAGC	1 cut(s)	442
PspGI	CCWGG	5 cut(s)	1096, 1366, 1451, 1459, 1567
PspN4I	GGNNCC	7 cut(s)	220, 468, 790, 1213, 1225, 1365, 1458
PspOMI	GGGCCC	1 cut(s)	218
PspPI	GGNCC	3 cut(s)	218, 219, 1100
PspXI	VCTCGAGB	1 cut(s)	313
PstNI	CAGNNNCTG	1 cut(s)	1574
PsuI	RGATCY	2 cut(s)	600, 1126
RruI	TCGCGA	1 cut(s)	974
RsaI	GTAC	5 cut(s)	234, 257, 657, 724, 827
RsaNI	GTAC	5 cut(s)	233, 256, 656, 723, 826
RseI	CAYNNNNRTG	3 cut(s)	732, 933, 1004
SacI	GAGCTC	2 cut(s)	48, 957
SapI	GCTCTTC	1 cut(s)	962
SaqAI	TTAA	4 cut(s)	38, 426, 1152, 1322
SatI	GCNGC	5 cut(s)	156, 268, 1068, 1094, 1352
Sau3AI	GATC	7 cut(s)	600, 688, 816, 969, 1126, 1578, 1651
Sau96I	GGNCC	3 cut(s)	218, 219, 1100
SchI	GAGTC	2 cut(s)	782, 1169
ScrFI	CCNGG	7 cut(s)	211, 456, 1098, 1368, 1453, 1461, 1569
SduI	GDGCHC	5 cut(s)	48, 222, 957, 1216, 1554
SfaNI	GCATC	8 cut(s)	61, 328, 370, 598, 915, 1170, 1288, 1663
SfcI	CTRYAG	2 cut(s)	1024, 1084
Sfr274I	CTCGAG	1 cut(s)	313
SfuI	TTCGAA	2 cut(s)	362, 368
SlaI	CTCGAG	1 cut(s)	313
SmiMI	CAYNNNNRTG	3 cut(s)	732, 933, 1004
SmlI	CTYRAG	2 cut(s)	37, 313
SmoI	CTYRAG	2 cut(s)	37, 313
SphI	GCATGC	1 cut(s)	359
Sse9I	AATT	9 cut(s)	364, 427, 547, 841, 1170, 1444, 1506, 1532, 1539
SseBI	AGGCCT	1 cut(s)	988
SsiI	CCGC	6 cut(s)	88, 156, 216, 383, 519, 576
SspMI	CTAG	6 cut(s)	507, 584, 777, 831, 1247, 1310
SstI	GAGCTC	2 cut(s)	48, 957
StuI	AGGCCT	1 cut(s)	988
StyD4I	CCNGG	7 cut(s)	209, 454, 1096, 1366, 1451, 1459, 1567
StyI	CCWWGG	1 cut(s)	730
TaaI	ACNGT	4 cut(s)	260, 328, 1012, 1526
TaiI	ACGT	2 cut(s)	201, 531
TaqII	GACCGA	1 cut(s)	290
TasI	AATT	9 cut(s)	364, 427, 547, 841, 1170, 1444, 1506, 1532, 1539
TatI	WGTACW	3 cut(s)	255, 655, 722
TauI	GCSGC	1 cut(s)	158
TfiI	GAWTC	5 cut(s)	102, 451, 650, 668, 981
Tru1I	TTAA	4 cut(s)	38, 426, 1152, 1322
Tru9I	TTAA	4 cut(s)	38, 426, 1152, 1322
TscAI	CASTG	2 cut(s)	1531, 1567
TseFI	GTSAC	2 cut(s)	694, 1006
TseI	GCWGC	4 cut(s)	267, 1067, 1093, 1351
Tsp45I	GTSAC	2 cut(s)	694, 1006
TspDTI	ATGAA	4 cut(s)	315, 488, 1355, 1494
TspGWI	ACGGA	3 cut(s)	781, 786, 945
TspRI	CASTG	2 cut(s)	1531, 1567
Vha464I	CTTAAG	1 cut(s)	37
XapI	RAATTY	2 cut(s)	364, 1444
XbaI	TCTAGA	2 cut(s)	1246, 1309
XceI	RCATGY	1 cut(s)	359
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1697
XhoI	CTCGAG	1 cut(s)	313
XspI	CTAG	6 cut(s)	507, 584, 777, 831, 1247, 1310

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.