Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010579

Physical Location & Seq

Genomic Coordinates Forward (+)

34200110 .. 34207614

Gene Structure 7505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024294

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGGTCTACTTGTGAATCTTCTTCACCTTCCTGCATTTTCATCCATTGCTTATAAACCTCACAGTGTTGAATATCCCAAAGCAAATGTAACAATTAAATGTAAGGCCTATGGAGGAGAATTGGATGCTTTGCCTCACTTACAAACTCTTAGAAAATTTCCAAGAGAGGATCTTGTTGAAAAAGTTGTCCTGGTCAGATTTGACTCTACCCTTTTGCTTCAGGAACAAGAAAAAGAACAAGAATTTCAATCCAATGCTGTTTTTACCATTAAGTATTTACACCAGTCCGGGGCTAAAGTAGTTCTTGTTAGTGACTGGAGTGCTAAAACTAATCCTAAAGTGTTTGCTGCACAGTCTGTTGCAGTTGTTCCGGTACAATGCATTTCTCATAACATGGTATCAAAGACAGAAGGCTTTGAAAAAGCAGATATTCTTCTCCTTGAGAATCTTTCTGATTTTAGAGGGGAAGTAGCCAATTGTTCAAAATTTGCTCAAGTTTTGTCATCGGGAGTTGATATTTTTGTCAATGACTACTTTTCCCGGTCTCATAAGATTCTTGCATCGACCTGTGGAGTTGCTCGCTTCTGTTATGCTTGTTTAGCTGGTTTTCACTTTGAGGAGTGCCTATATCGGCTCAGAAGGCTTGCAGAAACCGGTACAAAACCTTATGTAGCAATTATTGGAGGCAGTAATCTCTCTGATAAAGCCGCTGCTGTGCATACCTTAGCTTCTATATGTGATGGGTTAGTGTTTGTTGGAATGATGTCATTCCAAATAATGCATGCATTAGGGCTATCTGTTCCCTTGAATTTGGTGGAACATGGAGCACTTAAAGAAGCTTTAGATATAGTCCAGTTTGCACACAATAGAAATGTACAGATCCTATATCCAAAAGACTTTTGGTGCAAGAATGATTGTCATCCGGAGCAATTGGAAATATACCCTGCACGTGCTATTCCGGATGGGTGGGTACCTGTTGATATTGGACCTGTATCGTTAGATGGAATAAACTCCATTCTCACTAAATGCAAGAAAGTTACCTGGATTGGTCCAGTGAAATTTCATACGAACAGTGGCACAAAAGGAGCTTCTAAAGTGGCGCAATTGCTTAATCAACTAAGTCGAGGCAACAGCAACATAACTGTCATTGGCAATATGGCATGTCAAGGAATGGTGAAGGAATCAAATTCCATCTTTCACTTCAATATGTTAGAGAATGTTTCAGTTGTATGGGAGTTTCTCAAAGGAAGAAAACTTCCAGGCATCATGGCTTTAGATAGAGCATTCCCTTTTGATATTGACTGGAAGGCAGCCTATTCAGATCCTGCTCAACCTTTGGTAGTTGATATTGGAAGTGGTAATGGAATGTTTCTTTTCGGGATGGCTAAAACAAGGAAGGATTTGAATTTTCTCGGTTTGGAGATTAATAAAAAGCTGGTAAAACGTTGCCTGGATTCCAGTCATCAGTGTGGTATAAGAAATGGGTACTTCATCGCAACAAATGCAACATCAACATTCCGCTCCATAGTTTCTAGTTACCCCGGAAAGCTAGTACTTGTGTCAATACAGTGTCCAAATCCTGATTTCAACGAACCAGAACATCGATGGAGAATGCTGCAAAGGTCATTAGTCGAAGCAGTTGCTGATCTCCTTACAGTTGATGGAAAGGTGTTTCTGCAATCTGATATAGAGGTTGTCTCTGTGAGAATGAAGGAACAGTTTCTGAGATATGGCAAGGGCAAACTTGCTATTGTGCATGAGCAAAGTTATGCCATAAATAATGAAGGGTGGCTCAAGGACAATCCATTCGGAGTTCGCCAATGGATGAAGCTGGCTGCACTGCACCTTATACCACTAGAACTAGATGCATATATCTTCTCAAGTCAAAGTGGTCCAGGATCCTTTCTTGGTGGCATCTATTTATTTGTCCAAGCAATGTTGTCTTTTAATGGTAATGGATGGTTCAAGAGCTTTCAAAGTAAGAGAAATGATGGTGGGATGGAATGGAAGGTCTTGTTCCTTCTGTTCTTGGGTTCTCTGGATTCTCCGAAGTCTCCTTCAGCAAGTTTAAGGCAACGAAGTATTGCTCGAACCAGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010319 GO:0015977 GO:0015979 GO:0016020 GO:0016051 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019253 GO:0019538 GO:0019685 GO:0030312 GO:0031967 GO:0031975 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Methyltransf_4 PGK

Protein Analysis

701

Amino Acids

77.86

Weight (kDa)

8.89

Isoelectric Point (pI)

37.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGK	PF00162	57 - 388	1.6e-51	Phosphoglycerate kinase
Methyltransf_4	PF02390	444 - 578	5.4e-24	Putative methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010579)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g16270 FvH4_6g16270 FvH4_6g16270
malus_domestica	MD04G1094300.v1.1
prunus_persica	Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1
pyrus_communis	pycom04g08930
rosa_chinensis	RchiOBHm_Chr3g0470131
rosa_laevigata	RLG00000024294
rosa_roxburghii	Rroxscaffold_6G00411150
rosa_rugosa	Rorug03G0107200 Rorug03G0107300 Rorug03G0107400
rosa_samantha	Rh3BG180400 Rh3CG171200 Rh3DG194600
rosa_wichuraiana	Rw3G014720 Rw3G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	54
Acc65I	GGTACC	1 cut(s)	970
AccB1I	GGYRCC	1 cut(s)	970
AccBSI	CCGCTC	1 cut(s)	1521
AccI	GTMKAC	1 cut(s)	7
AccIII	TCCGGA	2 cut(s)	922, 958
AciI	CCGC	2 cut(s)	708, 1519
AclI	AACGTT	1 cut(s)	1444
AclWI	GGATC	5 cut(s)	177, 874, 1316, 1893, 1906
AcsI	RAATTY	7 cut(s)	155, 242, 485, 808, 1058, 1186, 1405
AcuI	CTGAAG	2 cut(s)	203, 2043
AcvI	CACGTG	1 cut(s)	950
AfaI	GTAC	6 cut(s)	375, 658, 876, 972, 1487, 1554
AfiI	CCNNNNNNNGG	1 cut(s)	289
AgeI	ACCGGT	1 cut(s)	653
AjnI	CCWGG	5 cut(s)	189, 1040, 1258, 1449, 1894
AluBI	AGCT	8 cut(s)	602, 728, 839, 1088, 1435, 1549, 1831, 1971
AluI	AGCT	8 cut(s)	602, 728, 839, 1088, 1435, 1549, 1831, 1971
Alw21I	GWGCWC	1 cut(s)	829
Alw26I	GTCTC	3 cut(s)	549, 1702, 2058
AlwI	GGATC	5 cut(s)	177, 874, 1316, 1893, 1906
AlwNI	CAGNNNCTG	3 cut(s)	1325, 1643, 1723
Aor13HI	TCCGGA	2 cut(s)	922, 958
AoxI	GGCC	1 cut(s)	105
ApeKI	GCWGC	5 cut(s)	347, 710, 1310, 1615, 1835
ApoI	RAATTY	7 cut(s)	155, 242, 485, 808, 1058, 1186, 1405
ArsI	GACNNNNNNTTYG	2 cut(s)	1790, 1822
AseI	ATTAAT	1 cut(s)	1425
AsiGI	ACCGGT	1 cut(s)	653
Asp700I	GAANNNNTTC	1 cut(s)	1719
Asp718I	GGTACC	1 cut(s)	970
AspLEI	GCGC	1 cut(s)	1102
AspS9I	GGNCC	3 cut(s)	986, 1049, 1892
AsuC2I	CCSGG	3 cut(s)	289, 541, 1542
AsuHPI	GGTGA	2 cut(s)	17, 1186
AvaII	GGWCC	3 cut(s)	986, 1049, 1892
BamHI	GGATCC	1 cut(s)	1898
BanI	GGYRCC	1 cut(s)	970
BbrPI	CACGTG	1 cut(s)	950
Bbv12I	GWGCWC	1 cut(s)	829
BbvI	GCAGC	5 cut(s)	334, 697, 1322, 1602, 1822
BcgI	CGANNNNNNTGC	2 cut(s)	1622, 1656
BciT130I	CCWGG	5 cut(s)	191, 1042, 1260, 1451, 1896
BcnI	CCSGG	3 cut(s)	289, 541, 1542
BcoDI	GTCTC	3 cut(s)	549, 1702, 2058
BfaI	CTAG	4 cut(s)	1533, 1550, 1856, 1862
BisI	GCNGC	6 cut(s)	348, 708, 711, 1311, 1616, 1836
BlsI	GCNGC	6 cut(s)	349, 709, 712, 1312, 1617, 1837
BmcAI	AGTACT	1 cut(s)	1554
Bme1390I	CCNGG	8 cut(s)	191, 289, 541, 1042, 1260, 1451, 1542, 1896
Bme18I	GGWCC	3 cut(s)	986, 1049, 1892
BmgT120I	GGNCC	3 cut(s)	986, 1049, 1892
BmiI	GGNNCC	2 cut(s)	972, 1900
BmrFI	CCNGG	8 cut(s)	191, 289, 541, 1042, 1260, 1451, 1542, 1896
BmsI	GCATC	5 cut(s)	115, 569, 1272, 1855, 1923
BplI	GAGNNNNNCTC	2 cut(s)	1682, 1714
BpmI	CTGGAG	1 cut(s)	337
Bpu10I	CCTNAGC	1 cut(s)	724
BpuEI	CTTGAG	4 cut(s)	461, 477, 1778, 1864
BpuMI	CCSGG	3 cut(s)	289, 541, 1542
Bsa29I	ATCGAT	1 cut(s)	1603
BsaAI	YACGTR	1 cut(s)	950
BsaBI	GATNNNNATC	1 cut(s)	918
BsaI	GGTCTC	1 cut(s)	549
BsaJI	CCNNGG	2 cut(s)	288, 1540
BsaWI	WCCGGW	4 cut(s)	370, 653, 922, 958
Bsc4I	CCNNNNNNNGG	1 cut(s)	289
Bse118I	RCCGGY	1 cut(s)	653
Bse1I	ACTGG	6 cut(s)	283, 320, 853, 1052, 1307, 1458
Bse3DI	GCAATG	2 cut(s)	45, 1941
Bse8I	GATNNNNATC	1 cut(s)	918
BseAI	TCCGGA	2 cut(s)	922, 958
BseBI	CCWGG	5 cut(s)	191, 1042, 1260, 1451, 1896
BseCI	ATCGAT	1 cut(s)	1603
BseDI	CCNNGG	2 cut(s)	288, 1540
BseGI	GGATG	8 cut(s)	41, 130, 919, 967, 1386, 1830, 1964, 2004
BseJI	GATNNNNATC	1 cut(s)	918
BseLI	CCNNNNNNNGG	1 cut(s)	289
BseMI	GCAATG	2 cut(s)	45, 1941
BseMII	CTCAG	2 cut(s)	649, 1715
BseNI	ACTGG	6 cut(s)	283, 320, 853, 1052, 1307, 1458
BseRI	GAGGAG	2 cut(s)	129, 632
BseXI	GCAGC	5 cut(s)	334, 697, 1322, 1602, 1822
BsgI	GTGCAG	4 cut(s)	333, 930, 1821, 1826
BshFI	GGCC	1 cut(s)	107
BshNI	GGYRCC	1 cut(s)	970
BshTI	ACCGGT	1 cut(s)	653
BshVI	ATCGAT	1 cut(s)	1603
BsiHKAI	GWGCWC	1 cut(s)	829
BsiSI	CCGG	7 cut(s)	288, 371, 541, 654, 923, 959, 1542
BslI	CCNNNNNNNGG	1 cut(s)	289
BsmAI	GTCTC	3 cut(s)	549, 1702, 2058
BsmI	GAATGC	2 cut(s)	1283, 1617
BsnI	GGCC	1 cut(s)	107
Bso31I	GGTCTC	1 cut(s)	549
Bsp1286I	GDGCHC	1 cut(s)	829
Bsp13I	TCCGGA	2 cut(s)	922, 958
Bsp1407I	TGTACA	1 cut(s)	874
Bsp143I	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
BspACI	CCGC	2 cut(s)	708, 1519
BspANI	GGCC	1 cut(s)	107
BspCNI	CTCAG	2 cut(s)	648, 1716
BspDI	ATCGAT	1 cut(s)	1603
BspEI	TCCGGA	2 cut(s)	922, 958
BspLI	GGNNCC	2 cut(s)	972, 1900
BspPI	GGATC	5 cut(s)	177, 874, 1316, 1893, 1906
BspT107I	GGYRCC	1 cut(s)	970
BspTNI	GGTCTC	1 cut(s)	549
BsrBI	CCGCTC	1 cut(s)	1521
BsrDI	GCAATG	2 cut(s)	45, 1941
BsrFI	RCCGGY	1 cut(s)	653
BsrGI	TGTACA	1 cut(s)	874
BsrI	ACTGG	6 cut(s)	283, 320, 853, 1052, 1307, 1458
BssAI	RCCGGY	1 cut(s)	653
BssECI	CCNNGG	2 cut(s)	288, 1540
BssMI	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
Bst2UI	CCWGG	5 cut(s)	191, 1042, 1260, 1451, 1896
Bst4CI	ACNGT	7 cut(s)	65, 354, 1073, 1144, 1569, 1657, 1719
BstAPI	GCANNNNNTGC	1 cut(s)	1502
BstAUI	TGTACA	1 cut(s)	874
BstBAI	YACGTR	1 cut(s)	950
BstC8I	GCNNGC	4 cut(s)	580, 645, 783, 1833
BstDEI	CTNAG	5 cut(s)	149, 635, 724, 1118, 1724
BstF5I	GGATG	8 cut(s)	41, 130, 919, 967, 1386, 1830, 1964, 2004
BstHHI	GCGC	1 cut(s)	1102
BstKTI	GATC	5 cut(s)	172, 882, 1324, 1648, 1901
BstMAI	GTCTC	3 cut(s)	549, 1702, 2058
BstMBI	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
BstMWI	GCNNNNNNNGC	3 cut(s)	599, 640, 1502
BstNI	CCWGG	5 cut(s)	191, 1042, 1260, 1451, 1896
BstNSI	RCATGY	2 cut(s)	785, 1164
BstSCI	CCNGG	8 cut(s)	189, 287, 539, 1040, 1258, 1449, 1540, 1894
BstV1I	GCAGC	5 cut(s)	334, 697, 1322, 1602, 1822
BstX2I	RGATCY	4 cut(s)	169, 879, 1321, 1898
BstYI	RGATCY	4 cut(s)	169, 879, 1321, 1898
Bsu15I	ATCGAT	1 cut(s)	1603
BsuRI	GGCC	1 cut(s)	107
BsuTUI	ATCGAT	1 cut(s)	1603
BtgZI	GCGATG	1 cut(s)	1477
BtsCI	GGATG	8 cut(s)	41, 130, 919, 967, 1386, 1830, 1964, 2004
BtsI	GCAGTG	1 cut(s)	1838
BtsIMutI	CAGTG	6 cut(s)	70, 1059, 1078, 1472, 1574, 1838
Cac8I	GCNNGC	4 cut(s)	580, 645, 783, 1833
CaiI	CAGNNNCTG	3 cut(s)	1325, 1643, 1723
CfoI	GCGC	1 cut(s)	1102
Cfr10I	RCCGGY	1 cut(s)	653
Cfr13I	GGNCC	3 cut(s)	986, 1049, 1892
ClaI	ATCGAT	1 cut(s)	1603
Csp6I	GTAC	6 cut(s)	374, 657, 875, 971, 1486, 1553
CspAI	ACCGGT	1 cut(s)	653
CviAII	CATG	6 cut(s)	394, 782, 821, 1161, 1267, 1757
CviQI	GTAC	6 cut(s)	374, 657, 875, 971, 1486, 1553
DdeI	CTNAG	5 cut(s)	149, 635, 724, 1118, 1724
DpnI	GATC	5 cut(s)	171, 881, 1323, 1647, 1900
DpnII	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
Eco147I	AGGCCT	1 cut(s)	107
Eco31I	GGTCTC	1 cut(s)	549
Eco47I	GGWCC	3 cut(s)	986, 1049, 1892
Eco57I	CTGAAG	2 cut(s)	203, 2043
Eco72I	CACGTG	1 cut(s)	950
EcoRII	CCWGG	5 cut(s)	189, 1040, 1258, 1449, 1894
EcoT22I	ATGCAT	4 cut(s)	383, 783, 787, 1870
FaeI	CATG	6 cut(s)	397, 785, 824, 1164, 1270, 1760
FalI	AAGNNNNNCTT	2 cut(s)	288, 320
FatI	CATG	6 cut(s)	393, 781, 820, 1160, 1266, 1756
FblI	GTMKAC	1 cut(s)	7
Fnu4HI	GCNGC	6 cut(s)	348, 708, 711, 1311, 1616, 1836
FokI	GGATG	8 cut(s)	28, 137, 906, 974, 1393, 1837, 1971, 2011
Fsp4HI	GCNGC	6 cut(s)	348, 708, 711, 1311, 1616, 1836
FspBI	CTAG	4 cut(s)	1533, 1550, 1856, 1862
GlaI	GCGC	1 cut(s)	1101
GluI	GCNGC	6 cut(s)	348, 708, 711, 1311, 1616, 1836
GsuI	CTGGAG	1 cut(s)	337
HaeIII	GGCC	1 cut(s)	107
HapII	CCGG	7 cut(s)	288, 371, 541, 654, 923, 959, 1542
HhaI	GCGC	1 cut(s)	1102
Hin1II	CATG	6 cut(s)	397, 785, 824, 1164, 1270, 1760
Hin6I	GCGC	1 cut(s)	1100
HinP1I	GCGC	1 cut(s)	1100
HindIII	AAGCTT	1 cut(s)	837
HinfI	GANTC	7 cut(s)	16, 203, 445, 553, 1181, 1454, 2042
HpaII	CCGG	7 cut(s)	288, 371, 541, 654, 923, 959, 1542
HphI	GGTGA	2 cut(s)	17, 1186
Hpy166II	GTNNAC	1 cut(s)	8
Hpy188I	TCNGA	9 cut(s)	197, 454, 638, 700, 1321, 1684, 1725, 1811, 2049
Hpy188III	TCNNGA	8 cut(s)	221, 507, 923, 959, 1378, 1580, 1966, 2039
Hpy8I	GTNNAC	1 cut(s)	8
HpyCH4III	ACNGT	7 cut(s)	65, 354, 1073, 1144, 1569, 1657, 1719
HpyCH4IV	ACGT	2 cut(s)	949, 1444
HpyF10VI	GCNNNNNNNGC	3 cut(s)	599, 640, 1502
HpyF3I	CTNAG	5 cut(s)	149, 635, 724, 1118, 1724
HpySE526I	ACGT	2 cut(s)	949, 1444
Hsp92II	CATG	6 cut(s)	397, 785, 824, 1164, 1270, 1760
HspAI	GCGC	1 cut(s)	1100
Kpn2I	TCCGGA	2 cut(s)	922, 958
KpnI	GGTACC	1 cut(s)	974
Kzo9I	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
LmnI	GCTCC	4 cut(s)	824, 925, 1085, 1526
Lsp1109I	GCAGC	5 cut(s)	334, 697, 1322, 1602, 1822
LweI	GCATC	5 cut(s)	115, 569, 1272, 1855, 1923
MaeI	CTAG	4 cut(s)	1533, 1550, 1856, 1862
MaeII	ACGT	2 cut(s)	949, 1444
MaeIII	GTNAC	4 cut(s)	88, 311, 1036, 1535
MalI	GATC	5 cut(s)	171, 881, 1323, 1647, 1900
MbiI	CCGCTC	1 cut(s)	1521
MboI	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
MboII	GAAGA	5 cut(s)	11, 14, 425, 1260, 1867
MfeI	CAATTG	3 cut(s)	475, 929, 1103
MflI	RGATCY	4 cut(s)	169, 879, 1321, 1898
MhlI	GDGCHC	1 cut(s)	829
MlyI	GAGTC	1 cut(s)	197
MmeI	TCCRAC	1 cut(s)	736
MnlI	CCTC	9 cut(s)	69, 107, 144, 160, 455, 610, 677, 1118, 1684
Mph1103I	ATGCAT	4 cut(s)	383, 783, 787, 1870
MroI	TCCGGA	2 cut(s)	922, 958
MroXI	GAANNNNTTC	1 cut(s)	1719
MseI	TTAA	7 cut(s)	96, 270, 831, 1110, 1425, 1947, 2069
MslI	CAYNNNNRTG	1 cut(s)	1467
MspA1I	CMGCKG	1 cut(s)	710
MspI	CCGG	7 cut(s)	288, 371, 541, 654, 923, 959, 1542
MspR9I	CCNGG	8 cut(s)	191, 289, 541, 1042, 1260, 1451, 1542, 1896
MunI	CAATTG	3 cut(s)	475, 929, 1103
Mva1269I	GAATGC	2 cut(s)	1283, 1617
MvaI	CCWGG	5 cut(s)	191, 1042, 1260, 1451, 1896
MwoI	GCNNNNNNNGC	3 cut(s)	599, 640, 1502
NciI	CCSGG	3 cut(s)	289, 541, 1542
NdeII	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
NlaIII	CATG	6 cut(s)	397, 785, 824, 1164, 1270, 1760
NlaIV	GGNNCC	2 cut(s)	972, 1900
NmuCI	GTSAC	1 cut(s)	311
NsiI	ATGCAT	4 cut(s)	383, 783, 787, 1870
NspI	RCATGY	2 cut(s)	785, 1164
PaeI	GCATGC	1 cut(s)	785
PceI	AGGCCT	1 cut(s)	107
PctI	GAATGC	2 cut(s)	1283, 1617
PdmI	GAANNNNTTC	1 cut(s)	1719
PfeI	GAWTC	6 cut(s)	16, 445, 553, 1181, 1454, 2042
PfoI	TCCNGGA	1 cut(s)	1894
PinAI	ACCGGT	1 cut(s)	653
PkrI	GCNGC	6 cut(s)	349, 709, 712, 1312, 1617, 1837
PleI	GAGTC	1 cut(s)	197
PmaCI	CACGTG	1 cut(s)	950
PmlI	CACGTG	1 cut(s)	950
PpsI	GAGTC	1 cut(s)	197
Ppu21I	YACGTR	1 cut(s)	950
PshBI	ATTAAT	1 cut(s)	1425
PsiI	TTATAA	1 cut(s)	54
Psp1406I	AACGTT	1 cut(s)	1444
Psp6I	CCWGG	5 cut(s)	189, 1040, 1258, 1449, 1894
PspCI	CACGTG	1 cut(s)	950
PspGI	CCWGG	5 cut(s)	189, 1040, 1258, 1449, 1894
PspN4I	GGNNCC	2 cut(s)	972, 1900
PspPI	GGNCC	3 cut(s)	986, 1049, 1892
PstNI	CAGNNNCTG	3 cut(s)	1325, 1643, 1723
PsuI	RGATCY	4 cut(s)	169, 879, 1321, 1898
RsaI	GTAC	6 cut(s)	375, 658, 876, 972, 1487, 1554
RsaNI	GTAC	6 cut(s)	374, 657, 875, 971, 1486, 1553
RseI	CAYNNNNRTG	1 cut(s)	1467
SaqAI	TTAA	7 cut(s)	96, 270, 831, 1110, 1425, 1947, 2069
SatI	GCNGC	6 cut(s)	348, 708, 711, 1311, 1616, 1836
Sau3AI	GATC	5 cut(s)	169, 879, 1321, 1645, 1898
Sau96I	GGNCC	3 cut(s)	986, 1049, 1892
ScaI	AGTACT	1 cut(s)	1554
SchI	GAGTC	1 cut(s)	197
ScrFI	CCNGG	8 cut(s)	191, 289, 541, 1042, 1260, 1451, 1542, 1896
SduI	GDGCHC	1 cut(s)	829
SfaNI	GCATC	5 cut(s)	115, 569, 1272, 1855, 1923
SinI	GGWCC	3 cut(s)	986, 1049, 1892
SmiMI	CAYNNNNRTG	1 cut(s)	1467
SmlI	CTYRAG	4 cut(s)	440, 492, 1793, 1879
SmoI	CTYRAG	4 cut(s)	440, 492, 1793, 1879
SphI	GCATGC	1 cut(s)	785
SseBI	AGGCCT	1 cut(s)	107
SsiI	CCGC	2 cut(s)	708, 1519
SspMI	CTAG	4 cut(s)	1533, 1550, 1856, 1862
StuI	AGGCCT	1 cut(s)	107
StyD4I	CCNGG	8 cut(s)	189, 287, 539, 1040, 1258, 1449, 1540, 1894
TaaI	ACNGT	7 cut(s)	65, 354, 1073, 1144, 1569, 1657, 1719
TaiI	ACGT	2 cut(s)	952, 1447
TaqI	TCGA	5 cut(s)	563, 1123, 1603, 1632, 2089
TatI	WGTACW	2 cut(s)	874, 1552
TauI	GCSGC	1 cut(s)	710
TfiI	GAWTC	6 cut(s)	16, 445, 553, 1181, 1454, 2042
Tru1I	TTAA	7 cut(s)	96, 270, 831, 1110, 1425, 1947, 2069
Tru9I	TTAA	7 cut(s)	96, 270, 831, 1110, 1425, 1947, 2069
TscAI	CASTG	6 cut(s)	70, 1059, 1078, 1472, 1574, 1845
TseFI	GTSAC	1 cut(s)	311
TseI	GCWGC	5 cut(s)	347, 710, 1310, 1615, 1835
Tsp45I	GTSAC	1 cut(s)	311
TspDTI	ATGAA	6 cut(s)	30, 1052, 1480, 1724, 1797, 1841
TspRI	CASTG	6 cut(s)	70, 1059, 1078, 1472, 1574, 1845
VpaK11BI	GGWCC	3 cut(s)	986, 1049, 1892
VspI	ATTAAT	1 cut(s)	1425
XapI	RAATTY	7 cut(s)	155, 242, 485, 808, 1058, 1186, 1405
XceI	RCATGY	2 cut(s)	785, 1164
XcmI	CCANNNNNNNNNTGG	2 cut(s)	897, 1602
XmiI	GTMKAC	1 cut(s)	7
XmnI	GAANNNNTTC	1 cut(s)	1719
XspI	CTAG	4 cut(s)	1533, 1550, 1856, 1862
ZrmI	AGTACT	1 cut(s)	1554
Zsp2I	ATGCAT	4 cut(s)	383, 783, 787, 1870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.