Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0010579

Physical Location & Seq

Genomic Coordinates Reverse (-)

8609266 .. 8611739

Gene Structure 2474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0107200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGGACTCCTCTTCCCCAATCCCTCTCCAGCAGACCCCTCTCGCCTCCCCAAAACCCTCCAAGAAAAGCTTCGTCACCTCTCTCATGGAGGTCGCCACCCTCCGAACCCCTTCCTTCAAGGAAGACACCTACTTCGTCTCCGGTCTCAAGTCCTCCGAGAAGAAGGCGCTCCAGGAGCTCAAGGACAAGCTCATTGCCTCCGACTCCTCCGACGGCGCCATGTGGGGCGTCAAATTGCTCGCCGGAGACGACAAGGCCGACGTCATCCTCCTCAAGTTTCTCCGGGCGCGGGATTTCCGGGTTGCTGACGCTTTCAACATGATAGTCAAGTGCCTGGAGTGGAGGAAGGAGTTCGGAGCGGACGGGGTTGCCGAGGAGGACCTGGGATTTAAGGAGCTCGAAGGTGTTGTTGCTTACATGCACGGATTTGATAGGTGCGGACACCCTGTGTGTTATAATGCCTATGGAGTCTTCAAGGACAAGGACATGTATGAGAGGATTTTCGGGGACGAGGAGAAGCTCAAGAAGTTTTTGAGGTGGAGAGTTCAGGTCCTCGAGAAGGGTATCAATGTCTTGCATTTTAAGCCGGGAGGGATCAACTCCATCATCCAAGTCACTGATCTCAAGGACATGCCCAAAAGGGAGCTCAGGGTTGCTTCAAATCAGATCCTTTCGCTGTTTCAGGACAACTACCCAGAAATGGTGGCCAGAAAGATTTTCATCAATGTACCCTGGTACTTCAGTGTTCTGTATTCAATGTTCAGTCCGTTTCTGACCCAAAGAACTAAGAGCAAGTTTGTGATATCCAAGGAAGGAAATGTTGCAGAGACACTCTACAAGTTTATTAGGCCTGAGGATGTTCCAGTTCAGTATGGTGGACTGAGTCGACCCAGTGATTTGCAAAACGGTCCTCCCAAACCGGCTTCGGAATTCACTGTCAAAGGAGGAGAGAAAGTTAACATTCAGATCGAGGGGATTGAGGCTGGTGCAACAATTACATGGGACATAGTTGTTGGAGGGTGGGACTTGGAGTACAGTGCTGAGTTTGTACCAAGTTCACAAGGAAGCTACATTGTTGCCGTGGAGAAGCCGAGAAAAGTCGCACCATCTGAAGAAGCAATCCACAACTCCTTCACTCCAAAAGAAGCCGGAAAAATGGTATTCTCAGTGGACAACTCTGCTTCCCGGCGAAAAAAGGTCGCGGCGTACCGCTACATTGTCCGGAAATCTGCCTCCGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010319 GO:0015977 GO:0015979 GO:0016020 GO:0016051 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019253 GO:0019538 GO:0019685 GO:0030312 GO:0031967 GO:0031975 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Methyltransf_4 PGK

Protein Analysis

413

Amino Acids

46.4

Weight (kDa)

8.88

Isoelectric Point (pI)

37.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	56 - 110	1.5e-12	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	134 - 293	2e-31	CRAL/TRIO domain
GOLD_PATL1_C	PF25099	314 - 398	2.2e-29	Patellin-1-like, C-terminal GOLD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010579)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g16270 FvH4_6g16270 FvH4_6g16270
malus_domestica	MD04G1094300.v1.1
prunus_persica	Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1 Prupe.6G232800_v2.0.a1
pyrus_communis	pycom04g08930
rosa_chinensis	RchiOBHm_Chr3g0470131
rosa_laevigata	RLG00000024294
rosa_roxburghii	Rroxscaffold_6G00411150
rosa_rugosa	Rorug03G0107200 Rorug03G0107300 Rorug03G0107400
rosa_samantha	Rh3BG180400 Rh3CG171200 Rh3DG194600
rosa_wichuraiana	Rw3G014720 Rw3G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	456
AatII	GACGTC	1 cut(s)	264
AccB1I	GGYRCC	1 cut(s)	215
AccBSI	CCGCTC	1 cut(s)	359
AccI	GTMKAC	1 cut(s)	886
AccII	CGCG	2 cut(s)	289, 1202
AccIII	TCCGGA	1 cut(s)	1221
AciI	CCGC	5 cut(s)	289, 359, 438, 1202, 1210
AclWI	GGATC	2 cut(s)	602, 661
AcoI	YGGCCR	1 cut(s)	705
AcsI	RAATTY	1 cut(s)	929
AcuI	CTGAAG	2 cut(s)	724, 1131
AcyI	GRCGYC	3 cut(s)	216, 228, 261
AdeI	CACNNNGTG	1 cut(s)	448
AfaI	GTAC	5 cut(s)	729, 737, 1034, 1050, 1208
AfiI	CCNNNNNNNGG	3 cut(s)	289, 559, 700
AflIII	ACRYGT	1 cut(s)	486
AgsI	TTSAA	5 cut(s)	118, 316, 475, 660, 756
AjnI	CCWGG	4 cut(s)	171, 333, 381, 731
AjuI	GAANNNNNNNTTGG	2 cut(s)	53, 85
AluBI	AGCT	7 cut(s)	69, 178, 190, 397, 520, 646, 1068
AluI	AGCT	7 cut(s)	69, 178, 190, 397, 520, 646, 1068
Alw21I	GWGCWC	3 cut(s)	180, 399, 648
Alw26I	GTCTC	4 cut(s)	142, 149, 240, 821
AlwI	GGATC	2 cut(s)	602, 661
Ama87I	CYCGRG	1 cut(s)	554
Aor13HI	TCCGGA	1 cut(s)	1221
AoxI	GGCC	3 cut(s)	255, 705, 848
ApoI	RAATTY	1 cut(s)	929
ArsI	GACNNNNNNTTYG	2 cut(s)	116, 148
Asp700I	GAANNNNTTC	3 cut(s)	68, 109, 350
AspLEI	GCGC	3 cut(s)	169, 218, 289
AspS9I	GGNCC	3 cut(s)	379, 550, 908
AsuC2I	CCSGG	4 cut(s)	284, 299, 588, 1186
AsuHPI	GGTGA	1 cut(s)	67
AvaI	CYCGRG	1 cut(s)	554
AvaII	GGWCC	3 cut(s)	379, 550, 908
AxyI	CCTNAGG	1 cut(s)	852
BaeI	ACNNNNGTAYC	2 cut(s)	727, 760
BalI	TGGCCA	1 cut(s)	707
BanI	GGYRCC	1 cut(s)	215
BanII	GRGCYC	3 cut(s)	180, 399, 648
BbsI	GAAGAC	2 cut(s)	129, 463
Bbv12I	GWGCWC	3 cut(s)	180, 399, 648
BccI	CCATC	2 cut(s)	611, 1114
BceAI	ACGGC	2 cut(s)	229, 1064
BciT130I	CCWGG	4 cut(s)	173, 335, 383, 733
BcnI	CCSGG	4 cut(s)	284, 299, 588, 1186
BcoDI	GTCTC	4 cut(s)	142, 149, 240, 821
BfaI	CTAG	1 cut(s)	1240
BfoI	RGCGCY	2 cut(s)	170, 219
BisI	GCNGC	1 cut(s)	1203
BlsI	GCNGC	1 cut(s)	1204
Bme1390I	CCNGG	8 cut(s)	173, 284, 299, 335, 383, 588, 733, 1186
Bme18I	GGWCC	3 cut(s)	379, 550, 908
BmeT110I	CYCGRG	1 cut(s)	554
BmgT120I	GGNCC	3 cut(s)	379, 550, 908
BmiI	GGNNCC	1 cut(s)	217
BmrFI	CCNGG	8 cut(s)	173, 284, 299, 335, 383, 588, 733, 1186
BmrI	ACTGGG	1 cut(s)	885
BmuI	ACTGGG	1 cut(s)	885
BpiI	GAAGAC	2 cut(s)	129, 463
BpmI	CTGGAG	3 cut(s)	11, 155, 356
Bpu10I	CCTNAGC	1 cut(s)	647
BpuEI	CTTGAG	5 cut(s)	131, 164, 257, 506, 608
BpuMI	CCSGG	4 cut(s)	284, 299, 588, 1186
BsaBI	GATNNNNATC	1 cut(s)	719
BsaHI	GRCGYC	3 cut(s)	216, 228, 261
BsaI	GGTCTC	1 cut(s)	149
BsaJI	CCNNGG	5 cut(s)	372, 382, 731, 807, 1080
BsaWI	WCCGGW	2 cut(s)	140, 1221
BsaXI	ACNNNNNCTCC	4 cut(s)	122, 152, 939, 969
Bsc4I	CCNNNNNNNGG	3 cut(s)	289, 559, 700
Bse118I	RCCGGY	1 cut(s)	919
Bse1I	ACTGG	2 cut(s)	863, 891
Bse21I	CCTNAGG	1 cut(s)	852
Bse3DI	GCAATG	1 cut(s)	192
Bse8I	GATNNNNATC	1 cut(s)	719
BseAI	TCCGGA	1 cut(s)	1221
BseBI	CCWGG	4 cut(s)	173, 335, 383, 733
BseDI	CCNNGG	5 cut(s)	372, 382, 731, 807, 1080
BseGI	GGATG	3 cut(s)	264, 606, 862
BseJI	GATNNNNATC	1 cut(s)	719
BseLI	CCNNNNNNNGG	3 cut(s)	289, 559, 700
BseMI	GCAATG	1 cut(s)	192
BseMII	CTCAG	5 cut(s)	661, 843, 872, 1032, 1179
BseNI	ACTGG	2 cut(s)	863, 891
BseRI	GAGGAG	5 cut(s)	196, 260, 389, 527, 960
Bsh1236I	CGCG	2 cut(s)	289, 1202
BshFI	GGCC	3 cut(s)	257, 707, 850
BshNI	GGYRCC	1 cut(s)	215
BsiHKAI	GWGCWC	3 cut(s)	180, 399, 648
BsiHKCI	CYCGRG	1 cut(s)	554
BsiSI	CCGG	9 cut(s)	141, 243, 283, 298, 587, 920, 1149, 1186, 1222
BslFI	GGGAC	3 cut(s)	521, 1016, 1037
BslI	CCNNNNNNNGG	3 cut(s)	289, 559, 700
BsmAI	GTCTC	4 cut(s)	142, 149, 240, 821
BsmBI	CGTCTC	2 cut(s)	142, 240
BsmFI	GGGAC	3 cut(s)	521, 1016, 1037
BsnI	GGCC	3 cut(s)	257, 707, 850
Bso31I	GGTCTC	1 cut(s)	149
BsoBI	CYCGRG	1 cut(s)	554
Bsp1286I	GDGCHC	3 cut(s)	180, 399, 648
Bsp13I	TCCGGA	1 cut(s)	1221
Bsp143I	GATC	4 cut(s)	594, 619, 666, 966
BspACI	CCGC	5 cut(s)	289, 359, 438, 1202, 1210
BspANI	GGCC	3 cut(s)	257, 707, 850
BspCNI	CTCAG	5 cut(s)	660, 844, 873, 1033, 1178
BspEI	TCCGGA	1 cut(s)	1221
BspFNI	CGCG	2 cut(s)	289, 1202
BspLI	GGNNCC	1 cut(s)	217
BspPI	GGATC	2 cut(s)	602, 661
BspT107I	GGYRCC	1 cut(s)	215
BspTNI	GGTCTC	1 cut(s)	149
BsrBI	CCGCTC	1 cut(s)	359
BsrDI	GCAATG	1 cut(s)	192
BsrFI	RCCGGY	1 cut(s)	919
BsrI	ACTGG	2 cut(s)	863, 891
BssAI	RCCGGY	1 cut(s)	919
BssECI	CCNNGG	5 cut(s)	372, 382, 731, 807, 1080
BssMI	GATC	4 cut(s)	594, 619, 666, 966
BssNI	GRCGYC	3 cut(s)	216, 228, 261
BssT1I	CCWWGG	1 cut(s)	807
Bst2UI	CCWGG	4 cut(s)	173, 335, 383, 733
Bst4CI	ACNGT	3 cut(s)	908, 937, 1037
Bst6I	CTCTTC	1 cut(s)	16
BstACI	GRCGYC	3 cut(s)	216, 228, 261
BstC8I	GCNNGC	1 cut(s)	240
BstDEI	CTNAG	6 cut(s)	647, 786, 852, 881, 1041, 1165
BstDSI	CCRYGG	1 cut(s)	1080
BstENI	CCTNNNNNAGG	1 cut(s)	557
BstF5I	GGATG	3 cut(s)	264, 606, 862
BstFNI	CGCG	2 cut(s)	289, 1202
BstH2I	RGCGCY	2 cut(s)	170, 219
BstHHI	GCGC	3 cut(s)	169, 218, 289
BstKTI	GATC	4 cut(s)	597, 622, 669, 969
BstMAI	GTCTC	4 cut(s)	142, 149, 240, 821
BstMBI	GATC	4 cut(s)	594, 619, 666, 966
BstMWI	GCNNNNNNNGC	2 cut(s)	175, 583
BstNI	CCWGG	4 cut(s)	173, 335, 383, 733
BstNSI	RCATGY	3 cut(s)	421, 490, 634
BstSCI	CCNGG	8 cut(s)	171, 282, 297, 333, 381, 586, 731, 1184
BstUI	CGCG	2 cut(s)	289, 1202
BstV2I	GAAGAC	2 cut(s)	129, 463
BstX2I	RGATCY	1 cut(s)	666
BstYI	RGATCY	1 cut(s)	666
Bsu36I	CCTNAGG	1 cut(s)	852
BsuRI	GGCC	3 cut(s)	257, 707, 850
BtgI	CCRYGG	1 cut(s)	1080
BtsCI	GGATG	3 cut(s)	264, 606, 862
BtsIMutI	CAGTG	6 cut(s)	615, 748, 898, 933, 1042, 1173
Cac8I	GCNNGC	1 cut(s)	240
CfoI	GCGC	3 cut(s)	169, 218, 289
Cfr10I	RCCGGY	1 cut(s)	919
Cfr13I	GGNCC	3 cut(s)	379, 550, 908
CseI	GACGC	2 cut(s)	217, 317
Csp6I	GTAC	5 cut(s)	728, 736, 1033, 1049, 1207
CviAII	CATG	7 cut(s)	85, 220, 319, 418, 487, 631, 999
CviQI	GTAC	5 cut(s)	728, 736, 1033, 1049, 1207
DdeI	CTNAG	6 cut(s)	647, 786, 852, 881, 1041, 1165
DinI	GGCGCC	1 cut(s)	217
DpnI	GATC	4 cut(s)	596, 621, 668, 968
DpnII	GATC	4 cut(s)	594, 619, 666, 966
DraIII	CACNNNGTG	1 cut(s)	448
EaeI	YGGCCR	1 cut(s)	705
Eam1104I	CTCTTC	1 cut(s)	16
EarI	CTCTTC	1 cut(s)	16
Ecl136II	GAGCTC	3 cut(s)	178, 397, 646
Eco130I	CCWWGG	1 cut(s)	807
Eco147I	AGGCCT	1 cut(s)	850
Eco24I	GRGCYC	3 cut(s)	180, 399, 648
Eco31I	GGTCTC	1 cut(s)	149
Eco32I	GATATC	1 cut(s)	804
Eco47I	GGWCC	3 cut(s)	379, 550, 908
Eco53kI	GAGCTC	3 cut(s)	178, 397, 646
Eco57I	CTGAAG	2 cut(s)	724, 1131
Eco81I	CCTNAGG	1 cut(s)	852
Eco88I	CYCGRG	1 cut(s)	554
EcoICRI	GAGCTC	3 cut(s)	178, 397, 646
EcoNI	CCTNNNNNAGG	1 cut(s)	557
EcoO109I	RGGNCCY	2 cut(s)	379, 550
EcoRI	GAATTC	1 cut(s)	929
EcoRII	CCWGG	4 cut(s)	171, 333, 381, 731
EcoRV	GATATC	1 cut(s)	804
EcoT14I	CCWWGG	1 cut(s)	807
EcoT38I	GRGCYC	3 cut(s)	180, 399, 648
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
ErhI	CCWWGG	1 cut(s)	807
Esp3I	CGTCTC	2 cut(s)	142, 240
FaeI	CATG	7 cut(s)	88, 223, 322, 421, 490, 634, 1002
FalI	AAGNNNNNCTT	2 cut(s)	53, 85
FaqI	GGGAC	3 cut(s)	521, 1016, 1037
FatI	CATG	7 cut(s)	84, 219, 318, 417, 486, 630, 998
FauI	CCCGC	1 cut(s)	282
FblI	GTMKAC	1 cut(s)	886
Fnu4HI	GCNGC	1 cut(s)	1203
FokI	GGATG	3 cut(s)	251, 593, 869
FriOI	GRGCYC	3 cut(s)	180, 399, 648
Fsp4HI	GCNGC	1 cut(s)	1203
FspBI	CTAG	1 cut(s)	1240
GlaI	GCGC	3 cut(s)	168, 217, 288
GluI	GCNGC	1 cut(s)	1203
GsuI	CTGGAG	3 cut(s)	11, 155, 356
HaeII	RGCGCY	2 cut(s)	170, 219
HaeIII	GGCC	3 cut(s)	257, 707, 850
HapII	CCGG	9 cut(s)	141, 243, 283, 298, 587, 920, 1149, 1186, 1222
HgaI	GACGC	2 cut(s)	217, 317
HhaI	GCGC	3 cut(s)	169, 218, 289
Hin1I	GRCGYC	3 cut(s)	216, 228, 261
Hin1II	CATG	7 cut(s)	88, 223, 322, 421, 490, 634, 1002
Hin6I	GCGC	3 cut(s)	167, 216, 287
HinP1I	GCGC	3 cut(s)	167, 216, 287
HincII	GTYRAC	2 cut(s)	887, 958
HindII	GTYRAC	2 cut(s)	887, 958
HindIII	AAGCTT	1 cut(s)	67
HinfI	GANTC	4 cut(s)	5, 203, 468, 883
HpaI	GTTAAC	1 cut(s)	958
HpaII	CCGG	9 cut(s)	141, 243, 283, 298, 587, 920, 1149, 1186, 1222
HphI	GGTGA	1 cut(s)	67
Hpy166II	GTNNAC	5 cut(s)	878, 887, 958, 1058, 1171
Hpy188III	TCNNGA	4 cut(s)	523, 556, 683, 1222
Hpy8I	GTNNAC	5 cut(s)	878, 887, 958, 1058, 1171
Hpy99I	CGWCG	2 cut(s)	215, 263
HpyAV	CCTTC	8 cut(s)	120, 124, 157, 340, 395, 553, 806, 1141
HpyCH4III	ACNGT	3 cut(s)	908, 937, 1037
HpyCH4IV	ACGT	1 cut(s)	261
HpyCH4V	TGCA	5 cut(s)	421, 577, 824, 901, 989
HpyF10VI	GCNNNNNNNGC	2 cut(s)	175, 583
HpyF3I	CTNAG	6 cut(s)	647, 786, 852, 881, 1041, 1165
HpySE526I	ACGT	1 cut(s)	261
Hsp92I	GRCGYC	3 cut(s)	216, 228, 261
Hsp92II	CATG	7 cut(s)	88, 223, 322, 421, 490, 634, 1002
HspAI	GCGC	3 cut(s)	167, 216, 287
KasI	GGCGCC	1 cut(s)	215
Kpn2I	TCCGGA	1 cut(s)	1221
KspAI	GTTAAC	1 cut(s)	958
Kzo9I	GATC	4 cut(s)	594, 619, 666, 966
LmnI	GCTCC	5 cut(s)	174, 175, 356, 394, 643
MaeI	CTAG	1 cut(s)	1240
MaeII	ACGT	1 cut(s)	261
MaeIII	GTNAC	2 cut(s)	73, 613
MalI	GATC	4 cut(s)	596, 621, 668, 968
MbiI	CCGCTC	1 cut(s)	359
MboI	GATC	4 cut(s)	594, 619, 666, 966
MboII	GAAGA	5 cut(s)	3, 134, 172, 463, 1124
MflI	RGATCY	1 cut(s)	666
MhlI	GDGCHC	3 cut(s)	180, 399, 648
MlsI	TGGCCA	1 cut(s)	707
MluCI	AATT	3 cut(s)	233, 929, 993
MluNI	TGGCCA	1 cut(s)	707
Mly113I	GGCGCC	1 cut(s)	216
MlyI	GAGTC	3 cut(s)	197, 477, 892
MmeI	TCCRAC	3 cut(s)	225, 234, 994
Mox20I	TGGCCA	1 cut(s)	707
MroI	TCCGGA	1 cut(s)	1221
MroXI	GAANNNNTTC	3 cut(s)	68, 109, 350
MscI	TGGCCA	1 cut(s)	707
MseI	TTAA	3 cut(s)	390, 582, 957
Msp20I	TGGCCA	1 cut(s)	707
MspI	CCGG	9 cut(s)	141, 243, 283, 298, 587, 920, 1149, 1186, 1222
MspR9I	CCNGG	8 cut(s)	173, 284, 299, 335, 383, 588, 733, 1186
MvaI	CCWGG	4 cut(s)	173, 335, 383, 733
MvnI	CGCG	2 cut(s)	289, 1202
MwoI	GCNNNNNNNGC	2 cut(s)	175, 583
NarI	GGCGCC	1 cut(s)	216
NciI	CCSGG	4 cut(s)	284, 299, 588, 1186
NdeII	GATC	4 cut(s)	594, 619, 666, 966
NlaIII	CATG	7 cut(s)	88, 223, 322, 421, 490, 634, 1002
NlaIV	GGNNCC	1 cut(s)	217
NmeAIII	GCCGAG	2 cut(s)	397, 1116
NmuCI	GTSAC	2 cut(s)	73, 613
NspI	RCATGY	3 cut(s)	421, 490, 634
PaeR7I	CTCGAG	1 cut(s)	554
PceI	AGGCCT	1 cut(s)	850
PciI	ACATGT	1 cut(s)	486
PcsI	WCGNNNNNNNCGW	3 cut(s)	246, 255, 369
PdmI	GAANNNNTTC	3 cut(s)	68, 109, 350
PflFI	GACNNNGTC	1 cut(s)	882
PfoI	TCCNGGA	1 cut(s)	171
PkrI	GCNGC	1 cut(s)	1204
PleI	GAGTC	3 cut(s)	197, 476, 891
PluTI	GGCGCC	1 cut(s)	219
PpsI	GAGTC	3 cut(s)	197, 476, 891
PpuMI	RGGWCCY	2 cut(s)	379, 550
PscI	ACATGT	1 cut(s)	486
PsiI	TTATAA	1 cut(s)	456
Psp124BI	GAGCTC	3 cut(s)	180, 399, 648
Psp5II	RGGWCCY	2 cut(s)	379, 550
Psp6I	CCWGG	4 cut(s)	171, 333, 381, 731
PspGI	CCWGG	4 cut(s)	171, 333, 381, 731
PspN4I	GGNNCC	1 cut(s)	217
PspPI	GGNCC	3 cut(s)	379, 550, 908
PspPPI	RGGWCCY	2 cut(s)	379, 550
PsrI	GAACNNNNNNTAC	2 cut(s)	743, 775
PsuI	RGATCY	1 cut(s)	666
PsyI	GACNNNGTC	1 cut(s)	882
RsaI	GTAC	5 cut(s)	729, 737, 1034, 1050, 1208
RsaNI	GTAC	5 cut(s)	728, 736, 1033, 1049, 1207
SacI	GAGCTC	3 cut(s)	180, 399, 648
SalI	GTCGAC	1 cut(s)	885
SaqAI	TTAA	3 cut(s)	390, 582, 957
SatI	GCNGC	1 cut(s)	1203
Sau3AI	GATC	4 cut(s)	594, 619, 666, 966
Sau96I	GGNCC	3 cut(s)	379, 550, 908
SchI	GAGTC	3 cut(s)	197, 477, 892
ScrFI	CCNGG	8 cut(s)	173, 284, 299, 335, 383, 588, 733, 1186
SduI	GDGCHC	3 cut(s)	180, 399, 648
SfoI	GGCGCC	1 cut(s)	217
Sfr274I	CTCGAG	1 cut(s)	554
SinI	GGWCC	3 cut(s)	379, 550, 908
SlaI	CTCGAG	1 cut(s)	554
SmlI	CTYRAG	6 cut(s)	146, 179, 272, 521, 554, 623
SmoI	CTYRAG	6 cut(s)	146, 179, 272, 521, 554, 623
Sse9I	AATT	3 cut(s)	233, 929, 993
SseBI	AGGCCT	1 cut(s)	850
SsiI	CCGC	5 cut(s)	289, 359, 438, 1202, 1210
SspDI	GGCGCC	1 cut(s)	215
SspMI	CTAG	1 cut(s)	1240
SstI	GAGCTC	3 cut(s)	180, 399, 648
StuI	AGGCCT	1 cut(s)	850
StyD4I	CCNGG	8 cut(s)	171, 282, 297, 333, 381, 586, 731, 1184
StyI	CCWWGG	1 cut(s)	807
TaaI	ACNGT	3 cut(s)	908, 937, 1037
TaiI	ACGT	1 cut(s)	264
TaqI	TCGA	4 cut(s)	399, 555, 886, 969
TasI	AATT	3 cut(s)	233, 929, 993
TatI	WGTACW	1 cut(s)	1032
TauI	GCSGC	1 cut(s)	1205
Tru1I	TTAA	3 cut(s)	390, 582, 957
Tru9I	TTAA	3 cut(s)	390, 582, 957
TscAI	CASTG	6 cut(s)	622, 748, 898, 940, 1042, 1173
TseFI	GTSAC	2 cut(s)	73, 613
Tsp45I	GTSAC	2 cut(s)	73, 613
TspDTI	ATGAA	1 cut(s)	709
TspGWI	ACGGA	3 cut(s)	438, 756, 1225
TspRI	CASTG	6 cut(s)	622, 748, 898, 940, 1042, 1173
Tth111I	GACNNNGTC	1 cut(s)	882
VpaK11BI	GGWCC	3 cut(s)	379, 550, 908
XagI	CCTNNNNNAGG	1 cut(s)	557
XapI	RAATTY	1 cut(s)	929
XceI	RCATGY	3 cut(s)	421, 490, 634
XhoI	CTCGAG	1 cut(s)	554
XmiI	GTMKAC	1 cut(s)	886
XmnI	GAANNNNTTC	3 cut(s)	68, 109, 350
XspI	CTAG	1 cut(s)	1240
ZraI	GACGTC	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.