Rorug03G0107400

Transcription initiation factor TFIID subunit 8-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0010579
Physical Location & Seq
Forward (+)
8627611 .. 8633422
5812 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0107400.1

Sequence Viewer

Length: 2097 bp
ATGGGAGCTGGAAGGAGGACACAGACCTTTACTATGCCTCCTACTCCAGACCTGGGAGCCTACTCTGTACAAGCAAGACAGTTGAGAAGTAATCACCTTGGTGGAGTTATCTTTGGTTGCAAGAGCAGCACAATGATGGAATGTCTATCTAAACAACTCTTTGGTTTACCGAGTCCACACTTTTCATATGTGAAGAATATTAGTCCTGGCTTGCCCCTCTTTCTCTTCAACTATAACGATAGGACGCTTCATGGAATTTATGAGGCTGCTAGCCATGGCCAAATGAATATTGATCCATATGGTTGGACAACTGATGGATCAGTGAGAACACAATTTCCTGCACAGGTTCAGATTCGTGTCCGGCTGCAGTGCCAACCACTGCTTGAGAGTCAGTTTAAACCGATTATTGCGGACAACTACTACAGTGCAAATAAATTCTGGTTTGAGCTTGATCATGCTCAGACAAACAAGCTGATGTCTTTGTTAGCATCTTGCGCAATCGCTCCAGGTAGTAAAGTACCGCAGAAAATACCAAAGAGGAAAACTGATCTTCCAATGCAACCCTCACGTAAGACAACAGTGGAAGCTCAGTGGCTTAAACCACTCACTTCAGGGGCGAAAACACTAGTTGGAAACTACATTCCATCTGAAGCTGTATTAGATGTGAAAGACGCTGAACAAGAAGAACAGCACCTCATTTGCGCAAAACTGAAAGAGTTGTCTCTTCAACGTGATCTCAACAGTGAATACCAAAACGTGCCTTTGTCAATAGATGTTAAAGATAGTGCTATTGTTAATGCAACTCCTGTAGCGGTCAATTGGAATCCACCTGAACCATTGGGTTTAGTGGAGATGAGGGTAGAGAGGTCTCATTCCTGGTCTGAGAAGAAGAGTGGAGGGAGTCCTTGCTCATTGTCTGCGCTGAGTCCTCGATCCTCGTCTGATCAGTCACAAATCGATAAGTTGGTTCAAGAGGTTGAAGAGTTAAAAGCTTTCAAGAATGAACAAGCTAAGAAGATAGGCTATTTGGAGCATAAGCTGGAGCAGGCACAGTTTGAAATTAAACAGTTAAAAGATGGTATGAAGTCGGAATCTGAGTCTGCACCATCCCTTGCACATATTGATGAAAAGCAGGCAGAGTCTGAGATTCAGGTAAAAGATGGTATGAAGTTGGAATCCGAGTCTGTAGCCTCCACACAAGAGAAGGATATTGCATCGTGCAATATGCTGGATCTGGATCCTAATGAGTCAATATATCTAGTTGGAGGATATGATGGTGAATCATGGTTATTGTCATTGGATTCTTATTATCCTTCTCGAGATGTGATAAAATCTCTTGGACCAATGAGCTCAGTTCGTGCATATGCTTCTGTTGCAAAATTAAATGGTGATCTTTATGTGATTGGAGGTGGTGATAGTGCTATGTGGTACGATACAGTTGAATCATACTGCCCTACTGACAACCAGTGGAAGGTTTGCCCTTCTTTGAGAGAGAAAAAGGGGAGCTTAGCTGCAGCTACCACAAACAACAAAATTTTTGCAATGGGTGGCGGCAATGGAATTGAGTGTTTTTCTGATGTTGAAATGCTTGATTCAGATGTTGGTCGATGGATCCGTACACAGTCGATGCTAGAAAAGAGATTTGCTCTCGCTGCGGCAGAACTAAATGGAGTAATTTATGCTACTGGAGGCTATGATGGGAATGGTTATTTGAAGTCTGTAGATAGGTTTGATCCAAGGGAACATAGTTGGAAGAAAGCCCCTTGTATGAAATCACAAAGGGGTTGCCATTCATTGGTTACATTGAATGAAAAATTGTATGCTCTGGGTGGTTATGATGGAGATTCTATGGTGTCAAGTGTAGAAATTTTTGACCCACGCCTTGAGTCATGGATGCCTGGGGAACCAATGAATTACTCTAGGGGATATTCGGCTGCGGCTGTTGTTAATGATACTATCTATGTAATTGGAGGGGTGAAAGGGGGTGCCAGCATTGCAGAGACCGTTGAATGCTACAAGGAGGGCCAAGGTTGGCAAGAAATGGCAGGGATGATTAGCAAAAGGTGCTTCCTGTCGGCCAGTGCTTACTCGACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
Bromo_TP TAF8_C

Protein Analysis

698

Amino Acids

77.02

Weight (kDa)

5.66

Isoelectric Point (pI)

46.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dev_Cell_Death PF10539 34 - 161 1.9e-52 Development and cell death domain
Beta-prop_FBX42 PF13415 413 - 582 1.1e-07 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 415 - 541 1.9e-09 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_1 PF01344 453 - 496 3.4e-10 Kelch motif
Kelch_FKB95 PF25210 498 - 595 4.1e-09 FKB95, Kelch-repeats domain
Kelch_1 PF01344 504 - 543 7.9e-07 Kelch motif
Kelch_KLHDC2_KLHL20_DRC7 PF24681 504 - 658 1.7e-16 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_Calicin PF13964 535 - 672 1.1e-13 Calicin, beta-propeller domain
Kelch_1 PF01344 549 - 591 1.9e-12 Kelch motif
Beta-prop_FBX42 PF13415 574 - 665 5.5e-06 FBX42, beta-propeller domain
Kelch_FKB95 PF25210 589 - 672 5.8e-11 FKB95, Kelch-repeats domain
Kelch_1 PF01344 594 - 638 6.8e-11 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 496, 703
AccB1I GGYRCC 1 cut(s) 1985
AccB7I CCANNNNNTGG 1 cut(s) 1795
AciI CCGC 6 cut(s) 410, 521, 812, 1551, 1655, 1937
AclWI GGATC 9 cut(s) 287, 325, 927, 1232, 1239, 1245, 1606, 1619, 1727
AcoI YGGCCR 2 cut(s) 277, 2076
AcsI RAATTY 4 cut(s) 255, 434, 1533, 1866
AcuI CTGAAG 2 cut(s) 594, 669
AfaI GTAC 4 cut(s) 69, 519, 1430, 1618
AfiI CCNNNNNNNGG 3 cut(s) 53, 1471, 1795
AhlI ACTAGT 1 cut(s) 625
AjnI CCWGG 5 cut(s) 51, 205, 505, 875, 1897
AleI CACNNNNGTG 1 cut(s) 99
AloI GAACNNNNNNTCC 2 cut(s) 319, 351
Alw21I GWGCWC 1 cut(s) 1352
Alw26I GTCTC 3 cut(s) 726, 873, 1994
AlwI GGATC 9 cut(s) 287, 325, 927, 1232, 1239, 1245, 1606, 1619, 1727
AlwNI CAGNNNCTG 1 cut(s) 1142
Ama87I CYCGRG 1 cut(s) 1317
AoxI GGCC 3 cut(s) 277, 2023, 2076
ApeKI GCWGC 7 cut(s) 126, 266, 364, 1511, 1514, 1652, 1934
ApoI RAATTY 4 cut(s) 255, 434, 1533, 1866
AspLEI GCGC 3 cut(s) 497, 704, 922
AspS9I GGNCC 2 cut(s) 1340, 2023
AsuHPI GGTGA 5 cut(s) 86, 1289, 1400, 1424, 1987
AsuNHI GCTAGC 1 cut(s) 269
AvaI CYCGRG 1 cut(s) 1317
AvaII GGWCC 1 cut(s) 1340
BalI TGGCCA 1 cut(s) 279
BamHI GGATCC 2 cut(s) 1237, 1611
BanI GGYRCC 1 cut(s) 1985
BanII GRGCYC 1 cut(s) 1352
Bbv12I GWGCWC 1 cut(s) 1352
BbvI GCAGC 7 cut(s) 138, 253, 351, 1498, 1526, 1639, 1921
BciT130I CCWGG 5 cut(s) 53, 207, 507, 877, 1899
BclI TGATCA 2 cut(s) 451, 943
BcoDI GTCTC 3 cut(s) 726, 873, 1994
BcuI ACTAGT 1 cut(s) 625
BfaI CTAG 5 cut(s) 270, 626, 1259, 1631, 1920
BfmI CTRYAG 6 cut(s) 365, 421, 807, 1185, 1512, 1719
BlpI GCTNAGC 1 cut(s) 1507
Bme1390I CCNGG 5 cut(s) 53, 207, 507, 877, 1899
Bme18I GGWCC 1 cut(s) 1340
BmeT110I CYCGRG 1 cut(s) 1317
BmgT120I GGNCC 2 cut(s) 1340, 2023
BmiI GGNNCC 5 cut(s) 58, 1239, 1613, 1905, 1987
BmrFI CCNGG 5 cut(s) 53, 207, 507, 877, 1899
BmsI GCATC 4 cut(s) 497, 1223, 1617, 1884
BmtI GCTAGC 1 cut(s) 273
BplI GAGNNNNNCTC 2 cut(s) 1630, 1662
BpmI CTGGAG 4 cut(s) 30, 489, 1061, 1707
Bpu1102I GCTNAGC 1 cut(s) 1507
BpuEI CTTGAG 2 cut(s) 404, 1904
Bsa29I ATCGAT 1 cut(s) 957
BsaAI YACGTR 1 cut(s) 569
BsaBI GATNNNNATC 1 cut(s) 1236
BsaI GGTCTC 2 cut(s) 873, 1994
BsaJI CCNNGG 6 cut(s) 52, 97, 274, 1736, 1898, 2026
BsaXI ACNNNNNCTCC 2 cut(s) 22, 52
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 1471, 1795
Bse1I ACTGG 3 cut(s) 1465, 1690, 2079
Bse3DI GCAATG 3 cut(s) 1548, 1561, 1992
Bse8I GATNNNNATC 1 cut(s) 1236
BseBI CCWGG 5 cut(s) 53, 207, 507, 877, 1899
BseCI ATCGAT 1 cut(s) 957
BseDI CCNNGG 6 cut(s) 52, 97, 274, 1736, 1898, 2026
BseGI GGATG 3 cut(s) 1106, 1899, 2055
BseJI GATNNNNATC 1 cut(s) 1236
BseLI CCNNNNNNNGG 3 cut(s) 53, 1471, 1795
BseMI GCAATG 3 cut(s) 1548, 1561, 1992
BseMII CTCAG 7 cut(s) 473, 602, 873, 914, 1086, 1134, 1365
BseNI ACTGG 3 cut(s) 1465, 1690, 2079
BseXI GCAGC 7 cut(s) 138, 253, 351, 1498, 1526, 1639, 1921
BsgI GTGCAG 2 cut(s) 324, 1086
BshFI GGCC 3 cut(s) 279, 2025, 2078
BshNI GGYRCC 1 cut(s) 1985
BshVI ATCGAT 1 cut(s) 957
BsiHKAI GWGCWC 1 cut(s) 1352
BsiHKCI CYCGRG 1 cut(s) 1317
BsiSI CCGG 1 cut(s) 361
BslI CCNNNNNNNGG 3 cut(s) 53, 1471, 1795
BsmAI GTCTC 3 cut(s) 726, 873, 1994
BsmI GAATGC 1 cut(s) 2015
BsnI GGCC 3 cut(s) 279, 2025, 2078
Bso31I GGTCTC 2 cut(s) 873, 1994
BsoBI CYCGRG 1 cut(s) 1317
Bsp1286I GDGCHC 1 cut(s) 1352
Bsp1407I TGTACA 1 cut(s) 67
Bsp1720I GCTNAGC 1 cut(s) 1507
Bsp19I CCATGG 1 cut(s) 274
BspACI CCGC 6 cut(s) 410, 521, 812, 1551, 1655, 1937
BspANI GGCC 3 cut(s) 279, 2025, 2078
BspCNI CTCAG 7 cut(s) 472, 601, 874, 915, 1087, 1135, 1364
BspDI ATCGAT 1 cut(s) 957
BspLI GGNNCC 5 cut(s) 58, 1239, 1613, 1905, 1987
BspMAI CTGCAG 2 cut(s) 369, 1516
BspOI GCTAGC 1 cut(s) 273
BspPI GGATC 9 cut(s) 287, 325, 927, 1232, 1239, 1245, 1606, 1619, 1727
BspT107I GGYRCC 1 cut(s) 1985
BspTNI GGTCTC 2 cut(s) 873, 1994
BsrDI GCAATG 3 cut(s) 1548, 1561, 1992
BsrGI TGTACA 1 cut(s) 67
BsrI ACTGG 3 cut(s) 1465, 1690, 2079
BssECI CCNNGG 6 cut(s) 52, 97, 274, 1736, 1898, 2026
BssT1I CCWWGG 4 cut(s) 97, 274, 1736, 2026
Bst2UI CCWGG 5 cut(s) 53, 207, 507, 877, 1899
Bst4CI ACNGT 9 cut(s) 81, 425, 580, 743, 1053, 1068, 1438, 1623, 2005
Bst6I CTCTTC 4 cut(s) 230, 729, 884, 975
BstAPI GCANNNNNTGC 1 cut(s) 2064
BstAUI TGTACA 1 cut(s) 67
BstBAI YACGTR 1 cut(s) 569
BstC8I GCNNGC 5 cut(s) 212, 271, 1047, 1134, 1990
BstDEI CTNAG 9 cut(s) 459, 588, 882, 923, 1011, 1095, 1143, 1351, 1507
BstDSI CCRYGG 1 cut(s) 274
BstF5I GGATG 3 cut(s) 1106, 1899, 2055
BstHHI GCGC 3 cut(s) 497, 704, 922
BstMAI GTCTC 3 cut(s) 726, 873, 1994
BstMWI GCNNNNNNNGC 6 cut(s) 126, 494, 1373, 1652, 1994, 2064
BstNI CCWGG 5 cut(s) 53, 207, 507, 877, 1899
BstSCI CCNGG 5 cut(s) 51, 205, 505, 875, 1897
BstSFI CTRYAG 6 cut(s) 365, 421, 807, 1185, 1512, 1719
BstV1I GCAGC 7 cut(s) 138, 253, 351, 1498, 1526, 1639, 1921
BstX2I RGATCY 3 cut(s) 1231, 1237, 1611
BstXI CCANNNNNNTGG 1 cut(s) 303
BstYI RGATCY 3 cut(s) 1231, 1237, 1611
Bsu15I ATCGAT 1 cut(s) 957
BsuRI GGCC 3 cut(s) 279, 2025, 2078
BsuTUI ATCGAT 1 cut(s) 957
BtgI CCRYGG 1 cut(s) 274
BtsCI GGATG 3 cut(s) 1106, 1899, 2055
BtsI GCAGTG 2 cut(s) 374, 377
BtsIMutI CAGTG 9 cut(s) 327, 374, 377, 430, 585, 596, 748, 1472, 2086
Cac8I GCNNGC 5 cut(s) 212, 271, 1047, 1134, 1990
CaiI CAGNNNCTG 1 cut(s) 1142
CfoI GCGC 3 cut(s) 497, 704, 922
Cfr13I GGNCC 2 cut(s) 1340, 2023
ClaI ATCGAT 1 cut(s) 957
CseI GACGC 2 cut(s) 253, 680
Csp6I GTAC 4 cut(s) 68, 518, 1429, 1617
CviAII CATG 5 cut(s) 251, 275, 455, 1284, 1890
CviQI GTAC 4 cut(s) 68, 518, 1429, 1617
DdeI CTNAG 9 cut(s) 459, 588, 882, 923, 1011, 1095, 1143, 1351, 1507
DraI TTTAAA 1 cut(s) 397
EaeI YGGCCR 2 cut(s) 277, 2076
Eam1104I CTCTTC 4 cut(s) 230, 729, 884, 975
EarI CTCTTC 4 cut(s) 230, 729, 884, 975
Ecl136II GAGCTC 1 cut(s) 1350
Eco130I CCWWGG 4 cut(s) 97, 274, 1736, 2026
Eco24I GRGCYC 1 cut(s) 1352
Eco31I GGTCTC 2 cut(s) 873, 1994
Eco47I GGWCC 1 cut(s) 1340
Eco53kI GAGCTC 1 cut(s) 1350
Eco57I CTGAAG 2 cut(s) 594, 669
Eco88I CYCGRG 1 cut(s) 1317
EcoICRI GAGCTC 1 cut(s) 1350
EcoRII CCWGG 5 cut(s) 51, 205, 505, 875, 1897
EcoT14I CCWWGG 4 cut(s) 97, 274, 1736, 2026
EcoT38I GRGCYC 1 cut(s) 1352
ErhI CCWWGG 4 cut(s) 97, 274, 1736, 2026
FaeI CATG 5 cut(s) 254, 278, 458, 1287, 1893
FalI AAGNNNNNCTT 2 cut(s) 1490, 1522
FatI CATG 5 cut(s) 250, 274, 454, 1283, 1889
FauNDI CATATG 3 cut(s) 187, 298, 1363
FbaI TGATCA 2 cut(s) 451, 943
FokI GGATG 3 cut(s) 1093, 1906, 2062
FriOI GRGCYC 1 cut(s) 1352
FspBI CTAG 5 cut(s) 270, 626, 1259, 1631, 1920
FspI TGCGCA 2 cut(s) 496, 703
GlaI GCGC 3 cut(s) 496, 703, 921
GsuI CTGGAG 4 cut(s) 30, 489, 1061, 1707
HaeIII GGCC 3 cut(s) 279, 2025, 2078
HapII CCGG 1 cut(s) 361
HgaI GACGC 2 cut(s) 253, 680
HhaI GCGC 3 cut(s) 497, 704, 922
Hin1II CATG 5 cut(s) 254, 278, 458, 1287, 1893
Hin6I GCGC 3 cut(s) 495, 702, 920
HinP1I GCGC 3 cut(s) 495, 702, 920
HindIII AAGCTT 1 cut(s) 990
HpaII CCGG 1 cut(s) 361
HphI GGTGA 5 cut(s) 86, 1289, 1400, 1424, 1987
Hpy166II GTNNAC 3 cut(s) 167, 176, 1619
Hpy188III TCNNGA 6 cut(s) 47, 971, 997, 1235, 1317, 1319
Hpy8I GTNNAC 3 cut(s) 167, 176, 1619
HpyAV CCTTC 5 cut(s) 6, 1198, 1323, 1465, 1491
HpyCH4III ACNGT 9 cut(s) 81, 425, 580, 743, 1053, 1068, 1438, 1623, 2005
HpyCH4IV ACGT 3 cut(s) 568, 730, 756
HpyF10VI GCNNNNNNNGC 6 cut(s) 126, 494, 1373, 1652, 1994, 2064
HpyF3I CTNAG 9 cut(s) 459, 588, 882, 923, 1011, 1095, 1143, 1351, 1507
HpySE526I ACGT 3 cut(s) 568, 730, 756
Hsp92II CATG 5 cut(s) 254, 278, 458, 1287, 1893
HspAI GCGC 3 cut(s) 495, 702, 920
Ksp22I TGATCA 2 cut(s) 451, 943
LmnI GCTCC 6 cut(s) 5, 56, 508, 1030, 1042, 1503
Lsp1109I GCAGC 7 cut(s) 138, 253, 351, 1498, 1526, 1639, 1921
LweI GCATC 4 cut(s) 497, 1223, 1617, 1884
MaeI CTAG 5 cut(s) 270, 626, 1259, 1631, 1920
MaeII ACGT 3 cut(s) 568, 730, 756
MaeIII GTNAC 2 cut(s) 948, 1798
MfeI CAATTG 1 cut(s) 817
MflI RGATCY 3 cut(s) 1231, 1237, 1611
MhlI GDGCHC 1 cut(s) 1352
MlsI TGGCCA 1 cut(s) 279
MluNI TGGCCA 1 cut(s) 279
MlyI GAGTC 9 cut(s) 181, 397, 910, 934, 1106, 1148, 1190, 1256, 1895
MmeI TCCRAC 6 cut(s) 284, 610, 1068, 1152, 1243, 1730
Mox20I TGGCCA 1 cut(s) 279
MscI TGGCCA 1 cut(s) 279
MseI TTAA 9 cut(s) 396, 597, 777, 795, 986, 1062, 1070, 1382, 1947
MslI CAYNNNNRTG 3 cut(s) 99, 134, 1122
Msp20I TGGCCA 1 cut(s) 279
MspI CCGG 1 cut(s) 361
MspR9I CCNGG 5 cut(s) 53, 207, 507, 877, 1899
MssI GTTTAAAC 1 cut(s) 397
MunI CAATTG 1 cut(s) 817
Mva1269I GAATGC 1 cut(s) 2015
MvaI CCWGG 5 cut(s) 53, 207, 507, 877, 1899
MwoI GCNNNNNNNGC 6 cut(s) 126, 494, 1373, 1652, 1994, 2064
NcoI CCATGG 1 cut(s) 274
NdeI CATATG 3 cut(s) 187, 298, 1363
NheI GCTAGC 1 cut(s) 269
NlaIII CATG 5 cut(s) 254, 278, 458, 1287, 1893
NlaIV GGNNCC 5 cut(s) 58, 1239, 1613, 1905, 1987
NmuCI GTSAC 1 cut(s) 948
NsbI TGCGCA 2 cut(s) 496, 703
OliI CACNNNNGTG 1 cut(s) 99
PaeR7I CTCGAG 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 1 cut(s) 1612
PctI GAATGC 1 cut(s) 2015
PflMI CCANNNNNTGG 1 cut(s) 1795
PleI GAGTC 9 cut(s) 180, 396, 909, 933, 1105, 1147, 1189, 1255, 1894
PmeI GTTTAAAC 1 cut(s) 397
PpsI GAGTC 9 cut(s) 180, 396, 909, 933, 1105, 1147, 1189, 1255, 1894
Ppu21I YACGTR 1 cut(s) 569
Psp124BI GAGCTC 1 cut(s) 1352
Psp6I CCWGG 5 cut(s) 51, 205, 505, 875, 1897
PspGI CCWGG 5 cut(s) 51, 205, 505, 875, 1897
PspN4I GGNNCC 5 cut(s) 58, 1239, 1613, 1905, 1987
PspPI GGNCC 2 cut(s) 1340, 2023
PstI CTGCAG 2 cut(s) 369, 1516
PstNI CAGNNNCTG 1 cut(s) 1142
PsuI RGATCY 3 cut(s) 1231, 1237, 1611
RsaI GTAC 4 cut(s) 69, 519, 1430, 1618
RsaNI GTAC 4 cut(s) 68, 518, 1429, 1617
RseI CAYNNNNRTG 3 cut(s) 99, 134, 1122
SacI GAGCTC 1 cut(s) 1352
SaqAI TTAA 9 cut(s) 396, 597, 777, 795, 986, 1062, 1070, 1382, 1947
Sau96I GGNCC 2 cut(s) 1340, 2023
SchI GAGTC 9 cut(s) 181, 397, 910, 934, 1106, 1148, 1190, 1256, 1895
ScrFI CCNGG 5 cut(s) 53, 207, 507, 877, 1899
SduI GDGCHC 1 cut(s) 1352
SfaNI GCATC 4 cut(s) 497, 1223, 1617, 1884
SfcI CTRYAG 6 cut(s) 365, 421, 807, 1185, 1512, 1719
Sfr274I CTCGAG 1 cut(s) 1317
SinI GGWCC 1 cut(s) 1340
SlaI CTCGAG 1 cut(s) 1317
SmiMI CAYNNNNRTG 3 cut(s) 99, 134, 1122
SmlI CTYRAG 3 cut(s) 383, 1317, 1883
SmoI CTYRAG 3 cut(s) 383, 1317, 1883
SpeI ACTAGT 1 cut(s) 625
SsiI CCGC 6 cut(s) 410, 521, 812, 1551, 1655, 1937
SspI AATATT 2 cut(s) 199, 289
SspMI CTAG 5 cut(s) 270, 626, 1259, 1631, 1920
SstI GAGCTC 1 cut(s) 1352
StyD4I CCNGG 5 cut(s) 51, 205, 505, 875, 1897
StyI CCWWGG 4 cut(s) 97, 274, 1736, 2026
TaaI ACNGT 9 cut(s) 81, 425, 580, 743, 1053, 1068, 1438, 1623, 2005
TaiI ACGT 3 cut(s) 571, 733, 759
TaqI TCGA 6 cut(s) 931, 957, 1318, 1606, 1625, 2090
TatI WGTACW 1 cut(s) 67
TauI GCSGC 3 cut(s) 1554, 1658, 1940
Tru1I TTAA 9 cut(s) 396, 597, 777, 795, 986, 1062, 1070, 1382, 1947
Tru9I TTAA 9 cut(s) 396, 597, 777, 795, 986, 1062, 1070, 1382, 1947
TscAI CASTG 9 cut(s) 327, 374, 384, 430, 585, 596, 748, 1472, 2086
TseFI GTSAC 1 cut(s) 948
TseI GCWGC 7 cut(s) 126, 266, 364, 1511, 1514, 1652, 1934
Tsp45I GTSAC 1 cut(s) 948
TspGWI ACGGA 1 cut(s) 1604
TspRI CASTG 9 cut(s) 327, 374, 384, 430, 585, 596, 748, 1472, 2086
Van91I CCANNNNNTGG 1 cut(s) 1795
VpaK11BI GGWCC 1 cut(s) 1340
XapI RAATTY 4 cut(s) 255, 434, 1533, 1866
XhoI CTCGAG 1 cut(s) 1317
XspI CTAG 5 cut(s) 270, 626, 1259, 1631, 1920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.