Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012710

Physical Location & Seq

Genomic Coordinates Forward (+)

15203545 .. 15208553

Gene Structure 5009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027786

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGGGCAGTGCTACGGCAAGACTATTCCGACGACGGCGGATAAGGACCCGACGGAGACCGGGACGACTGTCACCACCGGCGCGACGACCGTCACGACAATCACGACCTCCGTCCAGCAACCGACGCCGGCGCAGGAGGAGCAGCAGAACGGCGCCGGGAGCGTGAAGAGCACGCCGGCGCGGCCGTCGATCCCTCAGCCGAGCCCCTGGCCGAGTCCCTACCCGCACGGCGTATCTGCCAGCCCGCTGCCGGGGGGAGTGTCGCCTTCGCCGGCGAGGTCGTCGACGCCGGGGAGGTTTTTTCGGAGGAGGTTCGCGCCGCCGTCGCCGGCGAAGCACATAAAGGCGTCGCTGGCGAAGCGGTTCGGGCAGAAGCCGAAGGAGAGCCCGATTCCGGAGGAGCAGGGAGTTGAGCAGGAGCAGTCGCTGGATAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGAGCTTGGGAAAGAGGTCGGGCGAGGGCATTTTGGTCATACTTGCTCCGGTAGAGGCAAGAAAGGCGAGCTCAAGGACCAGCCTTTGGCCGTTAAGATCATCTCCAAAGCCAAGATGACAACGGCCATATCGATTGAAGATGTTCGCCGAGAGGTGAAGATATTGAAAGCTCTATCTGGGCATAAGCATCTTGTAAAATTTTATGATGCATGTGAAGACGCCAATAATGTTTACATTATCATGGAACTATGTGAAGGTGGGGAACTTCTTGACAGAATTTTATCCAGAGGTGGAAAGTATGCAGAAGAAGATGCAAAATTTATAGTTGTGCAAATTTTAAGTGTTGTTGCATTTTGTCATCTTCAAGGCGTCGTGCACCGTGACTTAAAGCCAGAGAACTTCCTTTTCGCTTCTAGAGATGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTTTCTGACTTTATCAGACCAGATGAAAGACTTAATGATATTGTTGGGAGTGCATATTATGTTGCACCTGAAGTCCTTCATAGATCTTATAGCCTTGAGGGAGATATATGGAGCATTGGTGTTATCACCTATATCCTGCTTTGCGGAAGCCGGCCTTTCTGGGCAAGAACAGAATCGGGAATTTTCCGTGCGGTGCTAAGAGCTGATCCTAGTTTTGATGATCCACCCTGGCCTTCTATGTCGGACGAGGCCAAGGACTTTGTAAAACGGCTTTTGAACAAGGACTACAGAAAGAGAATGACTGCTGTTCAGGCCTTATCTCACCCATGGTTGCGAGATGATAGTCGTCCTCTCCCTTTAGATATATTGATCTATAAATTAGTCAAGTCATATCTGCATGCTACACCTTTCAAACGTGCAGCACTTAAGTCTCTTTCAAAAGCCTTGACAGAGGATGAGCTGATATATCTTAGAGCCCAATTCATGCTTTTGGGACCAGATAAAGATCGACGTATCTCTCTTCATAATTTCAAAACAGCTCTTCAGAGAAATTCAACTGAAGCTATGATGGAGTCAAGGGTTGTTGATATTCTAAATGCAATGGAACCACTTGCATATAGGAAAATGGACTTTGAAGAATTTTGTGCTGCTGCAATTAGCACGCATCAATTGGAGGCCCTTGAAGGATGGGAGCAGATAGCATCTACTGCTTTTGAGCACTTCGAACGCGATGGCAACCGAGTCATATCGATTGAAGAACTGGCCAGAGAATTAAATCTGGGCACTTCTGCCTATTCAATCCTCAGAGATTGGATCAGAAACACAGATGGAAAACTTAGTTTCATGGGATATACAAAATTTTTGCATGGTGTGACGATCCGTAGCTCCAACACCAGGCACCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010150 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

Pkinase

Protein Analysis

610

Amino Acids

68.14

Weight (kDa)

8.58

Isoelectric Point (pI)

47.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	157 - 419	2.6e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	158 - 410	2.1e-33	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	230 - 310	3.6e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46700 AT2G46700 AT2G46700
fragaria_vesca	FvH4_7g17350 FvH4_7g17350
malus_domestica	MD01G1086500.v1.1 MD07G1156500.v1.1
prunus_persica	Prupe.2G194900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360791
rosa_laevigata	RLG00000027786
rosa_multiflora	Rmu_sc0000692.1_g000010
rosa_roxburghii	Rroxscaffold_4G00295810
rosa_rugosa	Rorug01G0281500
rosa_samantha	Rh1AG293500 Rh1BG258100 Rh1CG276000 Rh1DG288400
rosa_wichuraiana	Rw1G025970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	152, 1821
AccB7I	CCANNNNNTGG	1 cut(s)	556
AccI	GTMKAC	1 cut(s)	284
AccII	CGCG	4 cut(s)	83, 181, 317, 1653
AccIII	TCCGGA	1 cut(s)	394
AciI	CCGC	8 cut(s)	38, 181, 224, 245, 320, 361, 1068, 1115
AclWI	GGATC	5 cut(s)	184, 1124, 1139, 1745, 1795
AcoI	YGGCCR	5 cut(s)	182, 209, 558, 594, 1686
AcsI	RAATTY	9 cut(s)	454, 668, 747, 788, 804, 1104, 1474, 1562, 1781
AcuI	CTGAAG	3 cut(s)	1014, 1451, 1503
AcyI	GRCGYC	6 cut(s)	125, 153, 287, 347, 690, 840
AfiI	CCNNNNNNNGG	5 cut(s)	250, 251, 394, 556, 1818
AflII	CTTAAG	1 cut(s)	1349
AjnI	CCWGG	3 cut(s)	206, 1151, 1817
Alw21I	GWGCWC	4 cut(s)	173, 543, 849, 1644
Alw26I	GTCTC	2 cut(s)	50, 1359
Alw44I	GTGCAC	1 cut(s)	845
AlwI	GGATC	5 cut(s)	184, 1124, 1139, 1745, 1795
AlwNI	CAGNNNCTG	1 cut(s)	427
Aor13HI	TCCGGA	1 cut(s)	394
ApaLI	GTGCAC	1 cut(s)	845
ApeKI	GCWGC	5 cut(s)	142, 247, 1343, 1571, 1574
ApoI	RAATTY	9 cut(s)	454, 668, 747, 788, 804, 1104, 1474, 1562, 1781
Asp700I	GAANNNNTTC	3 cut(s)	362, 612, 999
AspLEI	GCGC	5 cut(s)	83, 133, 155, 181, 319
AspS9I	GGNCC	4 cut(s)	46, 547, 1418, 1600
AsuC2I	CCSGG	4 cut(s)	61, 157, 252, 291
AsuHPI	GGTGA	4 cut(s)	64, 637, 1042, 1238
AsuII	TTCGAA	1 cut(s)	1647
AvaII	GGWCC	3 cut(s)	46, 547, 1418
BaeGI	GKGCMC	2 cut(s)	849, 1709
BalI	TGGCCA	1 cut(s)	1688
BanI	GGYRCC	2 cut(s)	152, 1821
BanII	GRGCYC	4 cut(s)	206, 389, 543, 1402
BbsI	GAAGAC	1 cut(s)	693
Bbv12I	GWGCWC	4 cut(s)	173, 543, 849, 1644
BbvCI	CCTCAGC	1 cut(s)	195
BbvI	GCAGC	5 cut(s)	154, 234, 1355, 1558, 1561
BccI	CCATC	4 cut(s)	1486, 1605, 1649, 1745
BceAI	ACGGC	9 cut(s)	31, 51, 166, 169, 244, 307, 545, 609, 1208
BciT130I	CCWGG	3 cut(s)	208, 1153, 1819
BcnI	CCSGG	4 cut(s)	61, 157, 252, 291
BcoDI	GTCTC	2 cut(s)	50, 1359
BfaI	CTAG	2 cut(s)	885, 1134
BfmI	CTRYAG	1 cut(s)	1210
BfoI	RGCGCY	1 cut(s)	156
BfrI	CTTAAG	1 cut(s)	1349
BglI	GCCNNNNNGGC	1 cut(s)	181
BglII	AGATCT	1 cut(s)	1007
BisI	GCNGC	7 cut(s)	143, 182, 248, 320, 1344, 1572, 1575
BlsI	GCNGC	7 cut(s)	144, 183, 249, 321, 1345, 1573, 1576
Bme1390I	CCNGG	7 cut(s)	61, 157, 208, 252, 291, 1153, 1819
Bme18I	GGWCC	3 cut(s)	46, 547, 1418
BmgT120I	GGNCC	4 cut(s)	46, 547, 1418, 1600
BmiI	GGNNCC	5 cut(s)	48, 154, 1419, 1530, 1823
BmrFI	CCNGG	7 cut(s)	61, 157, 208, 252, 291, 1153, 1819
BmsI	GCATC	6 cut(s)	667, 667, 772, 886, 1597, 1634
BoxI	GACNNNNGTC	3 cut(s)	68, 89, 110
BpiI	GAAGAC	1 cut(s)	693
Bpu10I	CCTNAGC	1 cut(s)	195
Bpu14I	TTCGAA	1 cut(s)	1647
BpuEI	CTTGAG	2 cut(s)	527, 1040
BpuMI	CCSGG	4 cut(s)	61, 157, 252, 291
Bsa29I	ATCGAT	2 cut(s)	602, 1673
BsaBI	GATNNNNATC	1 cut(s)	1428
BsaHI	GRCGYC	6 cut(s)	125, 153, 287, 347, 690, 840
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	6 cut(s)	206, 251, 290, 1151, 1176, 1250
BsaWI	WCCGGW	2 cut(s)	394, 518
BsaXI	ACNNNNNCTCC	2 cut(s)	1027, 1057
Bsc4I	CCNNNNNNNGG	5 cut(s)	250, 251, 394, 556, 1818
Bse118I	RCCGGY	6 cut(s)	77, 127, 175, 271, 328, 1074
Bse1I	ACTGG	1 cut(s)	1689
Bse3DI	GCAATG	1 cut(s)	1530
Bse8I	GATNNNNATC	1 cut(s)	1428
BseAI	TCCGGA	1 cut(s)	394
BseBI	CCWGG	3 cut(s)	208, 1153, 1819
BseCI	ATCGAT	2 cut(s)	602, 1673
BseDI	CCNNGG	6 cut(s)	206, 251, 290, 1151, 1176, 1250
BseGI	GGATG	2 cut(s)	1384, 1616
BseJI	GATNNNNATC	1 cut(s)	1428
BseLI	CCNNNNNNNGG	5 cut(s)	250, 251, 394, 556, 1818
BseMI	GCAATG	1 cut(s)	1530
BseMII	CTCAG	2 cut(s)	209, 1741
BseNI	ACTGG	1 cut(s)	1689
BseRI	GAGGAG	3 cut(s)	152, 322, 413
BseSI	GKGCMC	2 cut(s)	849, 1709
BseX3I	CGGCCG	1 cut(s)	182
BseXI	GCAGC	5 cut(s)	154, 234, 1355, 1558, 1561
BsgI	GTGCAG	1 cut(s)	1362
Bsh1236I	CGCG	4 cut(s)	83, 181, 317, 1653
Bsh1285I	CGRYCG	2 cut(s)	90, 185
BshNI	GGYRCC	2 cut(s)	152, 1821
BshVI	ATCGAT	2 cut(s)	602, 1673
BsiEI	CGRYCG	2 cut(s)	90, 185
BsiHKAI	GWGCWC	4 cut(s)	173, 543, 849, 1644
BslFI	GGGAC	3 cut(s)	76, 201, 1431
BslI	CCNNNNNNNGG	5 cut(s)	250, 251, 394, 556, 1818
BsmAI	GTCTC	2 cut(s)	50, 1359
BsmFI	GGGAC	3 cut(s)	76, 201, 1431
Bso31I	GGTCTC	1 cut(s)	50
Bsp119I	TTCGAA	1 cut(s)	1647
Bsp1286I	GDGCHC	8 cut(s)	173, 206, 389, 543, 849, 1402, 1644, 1709
Bsp13I	TCCGGA	1 cut(s)	394
Bsp143I	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
Bsp19I	CCATGG	1 cut(s)	1250
BspACI	CCGC	8 cut(s)	38, 181, 224, 245, 320, 361, 1068, 1115
BspCNI	CTCAG	2 cut(s)	208, 1740
BspDI	ATCGAT	2 cut(s)	602, 1673
BspEI	TCCGGA	1 cut(s)	394
BspFNI	CGCG	4 cut(s)	83, 181, 317, 1653
BspLI	GGNNCC	5 cut(s)	48, 154, 1419, 1530, 1823
BspPI	GGATC	5 cut(s)	184, 1124, 1139, 1745, 1795
BspQI	GCTCTTC	2 cut(s)	161, 1470
BspT104I	TTCGAA	1 cut(s)	1647
BspT107I	GGYRCC	2 cut(s)	152, 1821
BspTI	CTTAAG	1 cut(s)	1349
BspTNI	GGTCTC	1 cut(s)	50
BsrDI	GCAATG	1 cut(s)	1530
BsrFI	RCCGGY	6 cut(s)	77, 127, 175, 271, 328, 1074
BsrI	ACTGG	1 cut(s)	1689
BssAI	RCCGGY	6 cut(s)	77, 127, 175, 271, 328, 1074
BssECI	CCNNGG	6 cut(s)	206, 251, 290, 1151, 1176, 1250
BssMI	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
BssNI	GRCGYC	6 cut(s)	125, 153, 287, 347, 690, 840
BssT1I	CCWWGG	2 cut(s)	1176, 1250
Bst2UI	CCWGG	3 cut(s)	208, 1153, 1819
Bst4CI	ACNGT	3 cut(s)	70, 91, 851
Bst6I	CTCTTC	3 cut(s)	161, 1449, 1470
BstACI	GRCGYC	6 cut(s)	125, 153, 287, 347, 690, 840
BstAFI	CTTAAG	1 cut(s)	1349
BstAPI	GCANNNNNTGC	1 cut(s)	1631
BstBI	TTCGAA	1 cut(s)	1647
BstDEI	CTNAG	6 cut(s)	195, 465, 1121, 1394, 1727, 1760
BstDSI	CCRYGG	1 cut(s)	1250
BstF5I	GGATG	2 cut(s)	1384, 1616
BstFNI	CGCG	4 cut(s)	83, 181, 317, 1653
BstH2I	RGCGCY	1 cut(s)	156
BstHHI	GCGC	5 cut(s)	83, 133, 155, 181, 319
BstKTI	GATC	9 cut(s)	192, 570, 1010, 1132, 1147, 1296, 1432, 1740, 1803
BstMAI	GTCTC	2 cut(s)	50, 1359
BstMBI	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
BstMCI	CGRYCG	2 cut(s)	90, 185
BstNI	CCWGG	3 cut(s)	208, 1153, 1819
BstNSI	RCATGY	2 cut(s)	684, 1325
BstPAI	GACNNNNGTC	3 cut(s)	68, 89, 110
BstSCI	CCNGG	7 cut(s)	59, 155, 206, 250, 289, 1151, 1817
BstSFI	CTRYAG	1 cut(s)	1210
BstSLI	GKGCMC	2 cut(s)	849, 1709
BstUI	CGCG	4 cut(s)	83, 181, 317, 1653
BstV1I	GCAGC	5 cut(s)	154, 234, 1355, 1558, 1561
BstV2I	GAAGAC	1 cut(s)	693
BstX2I	RGATCY	1 cut(s)	1007
BstYI	RGATCY	1 cut(s)	1007
BstZI	CGGCCG	1 cut(s)	182
Bsu15I	ATCGAT	2 cut(s)	602, 1673
BsuTUI	ATCGAT	2 cut(s)	602, 1673
BtgI	CCRYGG	1 cut(s)	1250
BtgZI	GCGATG	1 cut(s)	1668
BtsCI	GGATG	2 cut(s)	1384, 1616
BtsI	GCAGTG	1 cut(s)	14
BtsIMutI	CAGTG	1 cut(s)	14
CaiI	CAGNNNCTG	1 cut(s)	427
CfoI	GCGC	5 cut(s)	83, 133, 155, 181, 319
Cfr10I	RCCGGY	6 cut(s)	77, 127, 175, 271, 328, 1074
Cfr13I	GGNCC	4 cut(s)	46, 547, 1418, 1600
ClaI	ATCGAT	2 cut(s)	602, 1673
CseI	GACGC	5 cut(s)	133, 295, 336, 698, 829
CviAII	CATG	7 cut(s)	681, 712, 1251, 1322, 1408, 1768, 1790
DdeI	CTNAG	6 cut(s)	195, 465, 1121, 1394, 1727, 1760
DinI	GGCGCC	1 cut(s)	154
DpnI	GATC	9 cut(s)	191, 569, 1009, 1131, 1146, 1295, 1431, 1739, 1802
DpnII	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
EaeI	YGGCCR	5 cut(s)	182, 209, 558, 594, 1686
EagI	CGGCCG	1 cut(s)	182
Eam1104I	CTCTTC	3 cut(s)	161, 1449, 1470
EarI	CTCTTC	3 cut(s)	161, 1449, 1470
EciI	GGCGGA	1 cut(s)	53
Ecl136II	GAGCTC	1 cut(s)	541
EclXI	CGGCCG	1 cut(s)	182
Eco130I	CCWWGG	2 cut(s)	1176, 1250
Eco147I	AGGCCT	1 cut(s)	1238
Eco24I	GRGCYC	4 cut(s)	206, 389, 543, 1402
Eco31I	GGTCTC	1 cut(s)	50
Eco47I	GGWCC	3 cut(s)	46, 547, 1418
Eco52I	CGGCCG	1 cut(s)	182
Eco53kI	GAGCTC	1 cut(s)	541
Eco57I	CTGAAG	3 cut(s)	1014, 1451, 1503
EcoICRI	GAGCTC	1 cut(s)	541
EcoO109I	RGGNCCY	2 cut(s)	46, 1600
EcoRII	CCWGG	3 cut(s)	206, 1151, 1817
EcoT14I	CCWWGG	2 cut(s)	1176, 1250
EcoT22I	ATGCAT	1 cut(s)	682
EcoT38I	GRGCYC	4 cut(s)	206, 389, 543, 1402
EgeI	GGCGCC	1 cut(s)	154
EheI	GGCGCC	1 cut(s)	154
ErhI	CCWWGG	2 cut(s)	1176, 1250
FaeI	CATG	7 cut(s)	684, 715, 1254, 1325, 1411, 1771, 1793
FalI	AAGNNNNNCTT	2 cut(s)	1063, 1095
FaqI	GGGAC	3 cut(s)	76, 201, 1431
FatI	CATG	7 cut(s)	680, 711, 1250, 1321, 1407, 1767, 1789
FauI	CCCGC	2 cut(s)	231, 252
FblI	GTMKAC	1 cut(s)	284
Fnu4HI	GCNGC	7 cut(s)	143, 182, 248, 320, 1344, 1572, 1575
FokI	GGATG	2 cut(s)	1391, 1623
FriOI	GRGCYC	4 cut(s)	206, 389, 543, 1402
Fsp4HI	GCNGC	7 cut(s)	143, 182, 248, 320, 1344, 1572, 1575
FspBI	CTAG	2 cut(s)	885, 1134
GlaI	GCGC	5 cut(s)	82, 132, 154, 180, 318
GluI	GCNGC	7 cut(s)	143, 182, 248, 320, 1344, 1572, 1575
HaeII	RGCGCY	1 cut(s)	156
HgaI	GACGC	5 cut(s)	133, 295, 336, 698, 829
HhaI	GCGC	5 cut(s)	83, 133, 155, 181, 319
Hin1I	GRCGYC	6 cut(s)	125, 153, 287, 347, 690, 840
Hin1II	CATG	7 cut(s)	684, 715, 1254, 1325, 1411, 1771, 1793
Hin6I	GCGC	5 cut(s)	81, 131, 153, 179, 317
HinP1I	GCGC	5 cut(s)	81, 131, 153, 179, 317
HincII	GTYRAC	1 cut(s)	285
HindII	GTYRAC	1 cut(s)	285
HindIII	AAGCTT	1 cut(s)	908
HinfI	GANTC	5 cut(s)	214, 391, 1097, 1496, 1665
HphI	GGTGA	4 cut(s)	64, 637, 1042, 1238
Hpy166II	GTNNAC	3 cut(s)	285, 703, 847
Hpy188I	TCNGA	8 cut(s)	30, 306, 931, 941, 1168, 1470, 1730, 1742
Hpy188III	TCNNGA	7 cut(s)	94, 103, 395, 740, 756, 885, 1101
Hpy8I	GTNNAC	3 cut(s)	285, 703, 847
HpyAV	CCTTC	6 cut(s)	276, 373, 719, 1010, 1167, 1601
HpyCH4III	ACNGT	3 cut(s)	70, 91, 851
HpyCH4IV	ACGT	2 cut(s)	1339, 1435
HpyF3I	CTNAG	6 cut(s)	195, 465, 1121, 1394, 1727, 1760
HpySE526I	ACGT	2 cut(s)	1339, 1435
Hsp92I	GRCGYC	6 cut(s)	125, 153, 287, 347, 690, 840
Hsp92II	CATG	7 cut(s)	684, 715, 1254, 1325, 1411, 1771, 1793
HspAI	GCGC	5 cut(s)	81, 131, 153, 179, 317
KasI	GGCGCC	1 cut(s)	152
Kpn2I	TCCGGA	1 cut(s)	394
KroI	GCCGGC	5 cut(s)	127, 175, 271, 328, 1074
KroNI	GCCGGC	5 cut(s)	129, 177, 273, 330, 1076
Kzo9I	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
LguI	GCTCTTC	2 cut(s)	161, 1470
LmnI	GCTCC	9 cut(s)	139, 159, 400, 418, 461, 521, 1035, 1615, 1814
Lsp1109I	GCAGC	5 cut(s)	154, 234, 1355, 1558, 1561
LweI	GCATC	6 cut(s)	667, 667, 772, 886, 1597, 1634
MaeI	CTAG	2 cut(s)	885, 1134
MaeII	ACGT	2 cut(s)	1339, 1435
MaeIII	GTNAC	4 cut(s)	70, 91, 851, 1795
MalI	GATC	9 cut(s)	191, 569, 1009, 1131, 1146, 1295, 1431, 1739, 1802
MboI	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
MfeI	CAATTG	1 cut(s)	1592
MflI	RGATCY	1 cut(s)	1007
MhlI	GDGCHC	8 cut(s)	173, 206, 389, 543, 849, 1402, 1644, 1709
MlsI	TGGCCA	1 cut(s)	1688
MluNI	TGGCCA	1 cut(s)	1688
Mly113I	GGCGCC	1 cut(s)	153
MlyI	GAGTC	3 cut(s)	223, 1505, 1674
MmeI	TCCRAC	2 cut(s)	53, 1146
Mox20I	TGGCCA	1 cut(s)	1688
Mph1103I	ATGCAT	1 cut(s)	682
MreI	CGCCGGCG	4 cut(s)	127, 175, 271, 328
MroI	TCCGGA	1 cut(s)	394
MroNI	GCCGGC	5 cut(s)	127, 175, 271, 328, 1074
MroXI	GAANNNNTTC	3 cut(s)	362, 612, 999
MscI	TGGCCA	1 cut(s)	1688
MseI	TTAA	6 cut(s)	564, 809, 857, 957, 1350, 1697
MslI	CAYNNNNRTG	1 cut(s)	710
Msp20I	TGGCCA	1 cut(s)	1688
MspA1I	CMGCKG	1 cut(s)	247
MspCI	CTTAAG	1 cut(s)	1349
MspR9I	CCNGG	7 cut(s)	61, 157, 208, 252, 291, 1153, 1819
MunI	CAATTG	1 cut(s)	1592
MvaI	CCWGG	3 cut(s)	208, 1153, 1819
MvnI	CGCG	4 cut(s)	83, 181, 317, 1653
NaeI	GCCGGC	5 cut(s)	129, 177, 273, 330, 1076
NarI	GGCGCC	1 cut(s)	153
NciI	CCSGG	4 cut(s)	61, 157, 252, 291
NcoI	CCATGG	1 cut(s)	1250
NdeII	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
NgoMIV	GCCGGC	5 cut(s)	127, 175, 271, 328, 1074
NlaIII	CATG	7 cut(s)	684, 715, 1254, 1325, 1411, 1771, 1793
NlaIV	GGNNCC	5 cut(s)	48, 154, 1419, 1530, 1823
NmeAIII	GCCGAG	3 cut(s)	225, 237, 644
NmuCI	GTSAC	4 cut(s)	70, 91, 851, 1795
NsiI	ATGCAT	1 cut(s)	682
NspI	RCATGY	2 cut(s)	684, 1325
NspV	TTCGAA	1 cut(s)	1647
PaeI	GCATGC	1 cut(s)	1325
PceI	AGGCCT	1 cut(s)	1238
PciSI	GCTCTTC	2 cut(s)	161, 1470
PcsI	WCGNNNNNNNCGW	3 cut(s)	92, 101, 599
PdiI	GCCGGC	5 cut(s)	129, 177, 273, 330, 1076
PdmI	GAANNNNTTC	3 cut(s)	362, 612, 999
PfeI	GAWTC	2 cut(s)	391, 1097
PflMI	CCANNNNNTGG	1 cut(s)	556
PkrI	GCNGC	7 cut(s)	144, 183, 249, 321, 1345, 1573, 1576
PleI	GAGTC	3 cut(s)	222, 1504, 1673
PluTI	GGCGCC	1 cut(s)	156
PpsI	GAGTC	3 cut(s)	222, 1504, 1673
PpuMI	RGGWCCY	1 cut(s)	46
PshAI	GACNNNNGTC	3 cut(s)	68, 89, 110
Psp124BI	GAGCTC	1 cut(s)	543
Psp5II	RGGWCCY	1 cut(s)	46
Psp6I	CCWGG	3 cut(s)	206, 1151, 1817
PspGI	CCWGG	3 cut(s)	206, 1151, 1817
PspN4I	GGNNCC	5 cut(s)	48, 154, 1419, 1530, 1823
PspPI	GGNCC	4 cut(s)	46, 547, 1418, 1600
PspPPI	RGGWCCY	1 cut(s)	46
PsrI	GAACNNNNNNTAC	2 cut(s)	1193, 1225
PstNI	CAGNNNCTG	1 cut(s)	427
PsuI	RGATCY	1 cut(s)	1007
RseI	CAYNNNNRTG	1 cut(s)	710
SacI	GAGCTC	1 cut(s)	543
SalI	GTCGAC	1 cut(s)	283
SapI	GCTCTTC	2 cut(s)	161, 1470
SaqAI	TTAA	6 cut(s)	564, 809, 857, 957, 1350, 1697
SatI	GCNGC	7 cut(s)	143, 182, 248, 320, 1344, 1572, 1575
Sau3AI	GATC	9 cut(s)	189, 567, 1007, 1129, 1144, 1293, 1429, 1737, 1800
Sau96I	GGNCC	4 cut(s)	46, 547, 1418, 1600
SchI	GAGTC	3 cut(s)	223, 1505, 1674
ScrFI	CCNGG	7 cut(s)	61, 157, 208, 252, 291, 1153, 1819
SduI	GDGCHC	8 cut(s)	173, 206, 389, 543, 849, 1402, 1644, 1709
SfaNI	GCATC	6 cut(s)	667, 667, 772, 886, 1597, 1634
SfcI	CTRYAG	1 cut(s)	1210
SfoI	GGCGCC	1 cut(s)	154
SfuI	TTCGAA	1 cut(s)	1647
SgrAI	CRCCGGYG	5 cut(s)	77, 127, 175, 271, 328
SgrDI	CGTCGACG	1 cut(s)	283
SinI	GGWCC	3 cut(s)	46, 547, 1418
SmiMI	CAYNNNNRTG	1 cut(s)	710
SmlI	CTYRAG	3 cut(s)	542, 1019, 1349
SmoI	CTYRAG	3 cut(s)	542, 1019, 1349
SphI	GCATGC	1 cut(s)	1325
SseBI	AGGCCT	1 cut(s)	1238
SsiI	CCGC	8 cut(s)	38, 181, 224, 245, 320, 361, 1068, 1115
SspDI	GGCGCC	1 cut(s)	152
SspMI	CTAG	2 cut(s)	885, 1134
SstI	GAGCTC	1 cut(s)	543
StuI	AGGCCT	1 cut(s)	1238
StyD4I	CCNGG	7 cut(s)	59, 155, 206, 250, 289, 1151, 1817
StyI	CCWWGG	2 cut(s)	1176, 1250
TaaI	ACNGT	3 cut(s)	70, 91, 851
TaiI	ACGT	2 cut(s)	1342, 1438
TaqI	TCGA	6 cut(s)	188, 284, 602, 1432, 1647, 1673
TauI	GCSGC	2 cut(s)	184, 322
TfiI	GAWTC	2 cut(s)	391, 1097
Tru1I	TTAA	6 cut(s)	564, 809, 857, 957, 1350, 1697
Tru9I	TTAA	6 cut(s)	564, 809, 857, 957, 1350, 1697
TscAI	CASTG	1 cut(s)	14
TseFI	GTSAC	4 cut(s)	70, 91, 851, 1795
TseI	GCWGC	5 cut(s)	142, 247, 1343, 1571, 1574
Tsp45I	GTSAC	4 cut(s)	70, 91, 851, 1795
TspDTI	ATGAA	7 cut(s)	906, 920, 963, 992, 1396, 1436, 1756
TspGWI	ACGGA	4 cut(s)	68, 100, 1100, 1793
TspRI	CASTG	1 cut(s)	14
Van91I	CCANNNNNTGG	1 cut(s)	556
Vha464I	CTTAAG	1 cut(s)	1349
VneI	GTGCAC	1 cut(s)	845
VpaK11BI	GGWCC	3 cut(s)	46, 547, 1418
XapI	RAATTY	9 cut(s)	454, 668, 747, 788, 804, 1104, 1474, 1562, 1781
XbaI	TCTAGA	1 cut(s)	884
XceI	RCATGY	2 cut(s)	684, 1325
XmiI	GTMKAC	1 cut(s)	284
XmnI	GAANNNNTTC	3 cut(s)	362, 612, 999
XspI	CTAG	2 cut(s)	885, 1134
Zsp2I	ATGCAT	1 cut(s)	682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.