Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0012710

Physical Location & Seq

Genomic Coordinates Reverse (-)

51117821 .. 51122846

Gene Structure 5026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG288400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGGGCAGTGCTACGGCAAGACTATTCCGACGACGGCGGATAAGGACCCGACGGAGACCGGGACGACTGTCACCACCGGCGCGACGACCGTCACGACAATCACGACCTCCGTCCAGCACCCGACGCCGTCGCAGGAGGAGGAGCAGCAGAACGGCGCCGGGAGCGTGAAGTGCACGCCGGCGCGGACGTCGATCCCTCAGCCGAGCCCCTGGTCGAGTCCCTACCCGCACGGCGTGTCTGCCAGCCCGCTGCCGGGGGGAGTGTCGCCGTCGCCGGCGAGGTCGTCGACGCCGGGGAGGTTTTTTCGGAGGAGGTTCGCGCCGCCGTCGCCGGCGAAGCACATAAAGGCGTCGCTGGCGAAGCGGTTCGGGCAGAAGCCGAAGGAGAGCCCGATTCCGGAGGAGCAGGGAGTTGAGCAGGAGCAGTCGCTGGATAAGAGCTTTGGGTATGGTAAGAATTTTGGAGCCAAGTATGAGCTTGGGAAAGAGGTCGGGCGAGGGCATTTTGGTCATACTTGCTCCGGTAGAGGCAAGAAAGGCGAGCTCAAGGACAAGCCTTTGGCCGTTAAGATCATCTCCAAAGCCAAGATGACAACGGCCATATCGATTGAAGATGTTCGCCGAGAGGTGAAGATATTGAAAGCTCTATCTGGGCATAAGCATCTTGTAAAATTTTATGATGCATGTGAAGACGCCAATAATGTTTACATTATCATGGAACTATGTGAAGGTGGGGAACTTCTTGACAGAATTTTATCCAGAGGTGGAAAGTATGCAGAAGAAGATGCAAAATTTATAGCTGTACAAATTCTAAGTGTTGTTGCATTTTGTCATCTTCAAGGCGTCGTGCACCGTGACTTAAAGCCAGAGAACTTCCTTTTCGCTTCTAGAAATGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTTTCTGACTTTATCAGACCAGCTCACCCATGGTTGCGAGATGATAGTCGTCCTCTCCCTTTAGATATATTGATCTATAAATTAGTCAAATCATATCTGCATGCTACACCTTTCAAACGTGCAGCACTTAAGTCTCTTTCAAAAGCCTTGACGGAGGATGAGCTGATATATCTTAGAGCCCAATTCATGCTTTTGGGACCAGATAAAGATCGACGTATCTCTCTTCATAATTTCAAAACAGCTCTTCAGAGAAATTCAACTGAAGCTATGATGGAGTCAAGGGTTGTTGACATTCTAAATGCAATGGAACCACTTGCATATAGGAAAATGGACTTTGAAGAATTTTGTGCTGCTGCAATTAGCACGCATCAATTGGAGGCCCTCGAAGGATGGGAGCAGATAGCATCTACTGCTTTTGAGCACTTTGAACGCGATGGCAACCGAGTCATATCGATTGAAGAACTGGCCAGAGAATTAAATCTGGGCACTTCTGCCTATTCAATCCTCAGAGATTGGATCAGAAACACAGATGGAAAGCTTAGTTTCATGGGATATACAAAATTTTTGCATGGTGTGACGATCCGTAGCTCCAACACCAGGCACCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010150 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

Pkinase

Protein Analysis

511

Amino Acids

56.89

Weight (kDa)

8.83

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	158 - 317	1.9e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	159 - 317	2.9e-25	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	201 - 324	4.6e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46700 AT2G46700 AT2G46700
fragaria_vesca	FvH4_7g17350 FvH4_7g17350
malus_domestica	MD01G1086500.v1.1 MD07G1156500.v1.1
prunus_persica	Prupe.2G194900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360791
rosa_laevigata	RLG00000027786
rosa_multiflora	Rmu_sc0000692.1_g000010
rosa_roxburghii	Rroxscaffold_4G00295810
rosa_rugosa	Rorug01G0281500
rosa_samantha	Rh1AG293500 Rh1BG258100 Rh1CG276000 Rh1DG288400
rosa_wichuraiana	Rw1G025970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	191
AccB1I	GGYRCC	2 cut(s)	155, 1527
AccI	GTMKAC	1 cut(s)	287
AccII	CGCG	4 cut(s)	83, 184, 320, 1359
AccIII	TCCGGA	1 cut(s)	397
AciI	CCGC	6 cut(s)	38, 184, 227, 248, 323, 364
AclWI	GGATC	3 cut(s)	187, 1451, 1501
AcoI	YGGCCR	3 cut(s)	561, 597, 1392
AcsI	RAATTY	8 cut(s)	457, 671, 750, 791, 807, 1180, 1268, 1487
AcuI	CTGAAG	2 cut(s)	1157, 1209
AcyI	GRCGYC	7 cut(s)	125, 156, 188, 290, 350, 693, 843
AdeI	CACNNNGTG	1 cut(s)	235
AfaI	GTAC	1 cut(s)	804
AfiI	CCNNNNNNNGG	4 cut(s)	253, 254, 397, 1524
AflII	CTTAAG	1 cut(s)	1055
AjnI	CCWGG	2 cut(s)	209, 1523
Alw21I	GWGCWC	4 cut(s)	176, 546, 852, 1350
Alw26I	GTCTC	2 cut(s)	50, 1065
Alw44I	GTGCAC	2 cut(s)	172, 848
AlwI	GGATC	3 cut(s)	187, 1451, 1501
AlwNI	CAGNNNCTG	1 cut(s)	430
Aor13HI	TCCGGA	1 cut(s)	397
AoxI	GGCC	4 cut(s)	561, 597, 1305, 1392
ApaLI	GTGCAC	2 cut(s)	172, 848
ApeKI	GCWGC	5 cut(s)	145, 250, 1049, 1277, 1280
ApoI	RAATTY	8 cut(s)	457, 671, 750, 791, 807, 1180, 1268, 1487
Asp700I	GAANNNNTTC	2 cut(s)	365, 615
AspLEI	GCGC	4 cut(s)	83, 158, 184, 322
AspS9I	GGNCC	3 cut(s)	46, 1124, 1306
AsuC2I	CCSGG	4 cut(s)	61, 160, 255, 294
AsuHPI	GGTGA	3 cut(s)	64, 640, 944
AvaII	GGWCC	2 cut(s)	46, 1124
BaeGI	GKGCMC	3 cut(s)	176, 852, 1415
BalI	TGGCCA	1 cut(s)	1394
BanI	GGYRCC	2 cut(s)	155, 1527
BanII	GRGCYC	4 cut(s)	209, 392, 546, 1108
BbsI	GAAGAC	1 cut(s)	696
Bbv12I	GWGCWC	4 cut(s)	176, 546, 852, 1350
BbvCI	CCTCAGC	1 cut(s)	198
BbvI	GCAGC	5 cut(s)	157, 237, 1061, 1264, 1267
BccI	CCATC	4 cut(s)	1192, 1311, 1355, 1451
BceAI	ACGGC	9 cut(s)	31, 51, 112, 169, 247, 253, 310, 548, 612
BciT130I	CCWGG	2 cut(s)	211, 1525
BcnI	CCSGG	4 cut(s)	61, 160, 255, 294
BcoDI	GTCTC	2 cut(s)	50, 1065
BfaI	CTAG	1 cut(s)	888
BfoI	RGCGCY	1 cut(s)	159
BfrI	CTTAAG	1 cut(s)	1055
BisI	GCNGC	6 cut(s)	146, 251, 323, 1050, 1278, 1281
BlsI	GCNGC	6 cut(s)	147, 252, 324, 1051, 1279, 1282
Bme1390I	CCNGG	6 cut(s)	61, 160, 211, 255, 294, 1525
Bme18I	GGWCC	2 cut(s)	46, 1124
BmgT120I	GGNCC	3 cut(s)	46, 1124, 1306
BmiI	GGNNCC	6 cut(s)	48, 157, 466, 1125, 1236, 1529
BmrFI	CCNGG	6 cut(s)	61, 160, 211, 255, 294, 1525
BmsI	GCATC	6 cut(s)	670, 670, 775, 889, 1303, 1340
BoxI	GACNNNNGTC	3 cut(s)	68, 89, 110
BpiI	GAAGAC	1 cut(s)	696
Bpu10I	CCTNAGC	1 cut(s)	198
BpuEI	CTTGAG	1 cut(s)	530
BpuMI	CCSGG	4 cut(s)	61, 160, 255, 294
Bsa29I	ATCGAT	2 cut(s)	605, 1379
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaHI	GRCGYC	7 cut(s)	125, 156, 188, 290, 350, 693, 843
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	4 cut(s)	209, 254, 293, 956
BsaWI	WCCGGW	2 cut(s)	397, 521
Bsc4I	CCNNNNNNNGG	4 cut(s)	253, 254, 397, 1524
Bse118I	RCCGGY	4 cut(s)	77, 178, 274, 331
Bse1I	ACTGG	1 cut(s)	1395
Bse3DI	GCAATG	1 cut(s)	1236
Bse8I	GATNNNNATC	1 cut(s)	1134
BseAI	TCCGGA	1 cut(s)	397
BseBI	CCWGG	2 cut(s)	211, 1525
BseCI	ATCGAT	2 cut(s)	605, 1379
BseDI	CCNNGG	4 cut(s)	209, 254, 293, 956
BseGI	GGATG	2 cut(s)	1090, 1322
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	4 cut(s)	253, 254, 397, 1524
BseMI	GCAATG	1 cut(s)	1236
BseMII	CTCAG	2 cut(s)	212, 1447
BseNI	ACTGG	1 cut(s)	1395
BseRI	GAGGAG	4 cut(s)	152, 155, 325, 416
BseSI	GKGCMC	3 cut(s)	176, 852, 1415
BseXI	GCAGC	5 cut(s)	157, 237, 1061, 1264, 1267
BsgI	GTGCAG	1 cut(s)	1068
Bsh1236I	CGCG	4 cut(s)	83, 184, 320, 1359
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	4 cut(s)	563, 599, 1307, 1394
BshNI	GGYRCC	2 cut(s)	155, 1527
BshVI	ATCGAT	2 cut(s)	605, 1379
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	4 cut(s)	176, 546, 852, 1350
BslFI	GGGAC	3 cut(s)	76, 204, 1137
BslI	CCNNNNNNNGG	4 cut(s)	253, 254, 397, 1524
BsmAI	GTCTC	2 cut(s)	50, 1065
BsmFI	GGGAC	3 cut(s)	76, 204, 1137
BsnI	GGCC	4 cut(s)	563, 599, 1307, 1394
Bso31I	GGTCTC	1 cut(s)	50
Bsp1286I	GDGCHC	8 cut(s)	176, 209, 392, 546, 852, 1108, 1350, 1415
Bsp13I	TCCGGA	1 cut(s)	397
Bsp1407I	TGTACA	1 cut(s)	802
Bsp143I	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
Bsp19I	CCATGG	1 cut(s)	956
BspACI	CCGC	6 cut(s)	38, 184, 227, 248, 323, 364
BspANI	GGCC	4 cut(s)	563, 599, 1307, 1394
BspCNI	CTCAG	2 cut(s)	211, 1446
BspDI	ATCGAT	2 cut(s)	605, 1379
BspEI	TCCGGA	1 cut(s)	397
BspFNI	CGCG	4 cut(s)	83, 184, 320, 1359
BspLI	GGNNCC	6 cut(s)	48, 157, 466, 1125, 1236, 1529
BspPI	GGATC	3 cut(s)	187, 1451, 1501
BspQI	GCTCTTC	1 cut(s)	1176
BspT107I	GGYRCC	2 cut(s)	155, 1527
BspTI	CTTAAG	1 cut(s)	1055
BspTNI	GGTCTC	1 cut(s)	50
BsrDI	GCAATG	1 cut(s)	1236
BsrFI	RCCGGY	4 cut(s)	77, 178, 274, 331
BsrGI	TGTACA	1 cut(s)	802
BsrI	ACTGG	1 cut(s)	1395
BssAI	RCCGGY	4 cut(s)	77, 178, 274, 331
BssECI	CCNNGG	4 cut(s)	209, 254, 293, 956
BssMI	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
BssNI	GRCGYC	7 cut(s)	125, 156, 188, 290, 350, 693, 843
BssT1I	CCWWGG	1 cut(s)	956
Bst2UI	CCWGG	2 cut(s)	211, 1525
Bst4CI	ACNGT	3 cut(s)	70, 91, 854
Bst6I	CTCTTC	2 cut(s)	1155, 1176
BstACI	GRCGYC	7 cut(s)	125, 156, 188, 290, 350, 693, 843
BstAFI	CTTAAG	1 cut(s)	1055
BstAPI	GCANNNNNTGC	1 cut(s)	1337
BstAUI	TGTACA	1 cut(s)	802
BstDEI	CTNAG	5 cut(s)	198, 812, 1100, 1433, 1466
BstDSI	CCRYGG	1 cut(s)	956
BstF5I	GGATG	2 cut(s)	1090, 1322
BstFNI	CGCG	4 cut(s)	83, 184, 320, 1359
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	4 cut(s)	83, 158, 184, 322
BstKTI	GATC	6 cut(s)	195, 573, 1002, 1138, 1446, 1509
BstMAI	GTCTC	2 cut(s)	50, 1065
BstMBI	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
BstMCI	CGRYCG	1 cut(s)	90
BstNI	CCWGG	2 cut(s)	211, 1525
BstNSI	RCATGY	2 cut(s)	687, 1031
BstPAI	GACNNNNGTC	3 cut(s)	68, 89, 110
BstSCI	CCNGG	6 cut(s)	59, 158, 209, 253, 292, 1523
BstSLI	GKGCMC	3 cut(s)	176, 852, 1415
BstUI	CGCG	4 cut(s)	83, 184, 320, 1359
BstV1I	GCAGC	5 cut(s)	157, 237, 1061, 1264, 1267
BstV2I	GAAGAC	1 cut(s)	696
Bsu15I	ATCGAT	2 cut(s)	605, 1379
BsuRI	GGCC	4 cut(s)	563, 599, 1307, 1394
BsuTUI	ATCGAT	2 cut(s)	605, 1379
BtgI	CCRYGG	1 cut(s)	956
BtgZI	GCGATG	1 cut(s)	1374
BtsCI	GGATG	2 cut(s)	1090, 1322
BtsI	GCAGTG	1 cut(s)	14
BtsIMutI	CAGTG	1 cut(s)	14
CaiI	CAGNNNCTG	1 cut(s)	430
CfoI	GCGC	4 cut(s)	83, 158, 184, 322
Cfr10I	RCCGGY	4 cut(s)	77, 178, 274, 331
Cfr13I	GGNCC	3 cut(s)	46, 1124, 1306
ClaI	ATCGAT	2 cut(s)	605, 1379
CseI	GACGC	5 cut(s)	133, 298, 339, 701, 832
Csp6I	GTAC	1 cut(s)	803
CviAII	CATG	7 cut(s)	684, 715, 957, 1028, 1114, 1474, 1496
CviQI	GTAC	1 cut(s)	803
DdeI	CTNAG	5 cut(s)	198, 812, 1100, 1433, 1466
DinI	GGCGCC	1 cut(s)	157
DpnI	GATC	6 cut(s)	194, 572, 1001, 1137, 1445, 1508
DpnII	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
DraIII	CACNNNGTG	1 cut(s)	235
EaeI	YGGCCR	3 cut(s)	561, 597, 1392
Eam1104I	CTCTTC	2 cut(s)	1155, 1176
EarI	CTCTTC	2 cut(s)	1155, 1176
EciI	GGCGGA	1 cut(s)	53
Ecl136II	GAGCTC	1 cut(s)	544
Eco130I	CCWWGG	1 cut(s)	956
Eco24I	GRGCYC	4 cut(s)	209, 392, 546, 1108
Eco31I	GGTCTC	1 cut(s)	50
Eco47I	GGWCC	2 cut(s)	46, 1124
Eco53kI	GAGCTC	1 cut(s)	544
Eco57I	CTGAAG	2 cut(s)	1157, 1209
EcoICRI	GAGCTC	1 cut(s)	544
EcoO109I	RGGNCCY	2 cut(s)	46, 1306
EcoRII	CCWGG	2 cut(s)	209, 1523
EcoT14I	CCWWGG	1 cut(s)	956
EcoT22I	ATGCAT	1 cut(s)	685
EcoT38I	GRGCYC	4 cut(s)	209, 392, 546, 1108
EgeI	GGCGCC	1 cut(s)	157
EheI	GGCGCC	1 cut(s)	157
ErhI	CCWWGG	1 cut(s)	956
FaeI	CATG	7 cut(s)	687, 718, 960, 1031, 1117, 1477, 1499
FaqI	GGGAC	3 cut(s)	76, 204, 1137
FatI	CATG	7 cut(s)	683, 714, 956, 1027, 1113, 1473, 1495
FauI	CCCGC	2 cut(s)	234, 255
FblI	GTMKAC	1 cut(s)	287
Fnu4HI	GCNGC	6 cut(s)	146, 251, 323, 1050, 1278, 1281
FokI	GGATG	2 cut(s)	1097, 1329
FriOI	GRGCYC	4 cut(s)	209, 392, 546, 1108
Fsp4HI	GCNGC	6 cut(s)	146, 251, 323, 1050, 1278, 1281
FspBI	CTAG	1 cut(s)	888
GlaI	GCGC	4 cut(s)	82, 157, 183, 321
GluI	GCNGC	6 cut(s)	146, 251, 323, 1050, 1278, 1281
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	4 cut(s)	563, 599, 1307, 1394
HgaI	GACGC	5 cut(s)	133, 298, 339, 701, 832
HhaI	GCGC	4 cut(s)	83, 158, 184, 322
Hin1I	GRCGYC	7 cut(s)	125, 156, 188, 290, 350, 693, 843
Hin1II	CATG	7 cut(s)	687, 718, 960, 1031, 1117, 1477, 1499
Hin6I	GCGC	4 cut(s)	81, 156, 182, 320
HinP1I	GCGC	4 cut(s)	81, 156, 182, 320
HincII	GTYRAC	2 cut(s)	288, 1216
HindII	GTYRAC	2 cut(s)	288, 1216
HindIII	AAGCTT	2 cut(s)	911, 1463
HinfI	GANTC	4 cut(s)	217, 394, 1202, 1371
HphI	GGTGA	3 cut(s)	64, 640, 944
Hpy166II	GTNNAC	5 cut(s)	174, 288, 706, 850, 1216
Hpy188I	TCNGA	7 cut(s)	30, 309, 934, 944, 1176, 1436, 1448
Hpy188III	TCNNGA	6 cut(s)	94, 103, 398, 743, 759, 888
Hpy8I	GTNNAC	5 cut(s)	174, 288, 706, 850, 1216
HpyAV	CCTTC	3 cut(s)	376, 722, 1307
HpyCH4III	ACNGT	3 cut(s)	70, 91, 854
HpyCH4IV	ACGT	3 cut(s)	188, 1045, 1141
HpyF3I	CTNAG	5 cut(s)	198, 812, 1100, 1433, 1466
HpySE526I	ACGT	3 cut(s)	188, 1045, 1141
Hsp92I	GRCGYC	7 cut(s)	125, 156, 188, 290, 350, 693, 843
Hsp92II	CATG	7 cut(s)	687, 718, 960, 1031, 1117, 1477, 1499
HspAI	GCGC	4 cut(s)	81, 156, 182, 320
KasI	GGCGCC	1 cut(s)	155
Kpn2I	TCCGGA	1 cut(s)	397
KroI	GCCGGC	3 cut(s)	178, 274, 331
KroNI	GCCGGC	3 cut(s)	180, 276, 333
Kzo9I	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
LguI	GCTCTTC	1 cut(s)	1176
LmnI	GCTCC	8 cut(s)	142, 162, 403, 421, 464, 524, 1321, 1520
Lsp1109I	GCAGC	5 cut(s)	157, 237, 1061, 1264, 1267
LweI	GCATC	6 cut(s)	670, 670, 775, 889, 1303, 1340
MaeI	CTAG	1 cut(s)	888
MaeII	ACGT	3 cut(s)	188, 1045, 1141
MaeIII	GTNAC	4 cut(s)	70, 91, 854, 1501
MalI	GATC	6 cut(s)	194, 572, 1001, 1137, 1445, 1508
MboI	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
MfeI	CAATTG	1 cut(s)	1298
MhlI	GDGCHC	8 cut(s)	176, 209, 392, 546, 852, 1108, 1350, 1415
MlsI	TGGCCA	1 cut(s)	1394
MluNI	TGGCCA	1 cut(s)	1394
Mly113I	GGCGCC	1 cut(s)	156
MlyI	GAGTC	3 cut(s)	226, 1211, 1380
MmeI	TCCRAC	1 cut(s)	53
Mox20I	TGGCCA	1 cut(s)	1394
Mph1103I	ATGCAT	1 cut(s)	685
MreI	CGCCGGCG	3 cut(s)	178, 274, 331
MroI	TCCGGA	1 cut(s)	397
MroNI	GCCGGC	3 cut(s)	178, 274, 331
MroXI	GAANNNNTTC	2 cut(s)	365, 615
MscI	TGGCCA	1 cut(s)	1394
MseI	TTAA	4 cut(s)	567, 860, 1056, 1403
MslI	CAYNNNNRTG	1 cut(s)	713
Msp20I	TGGCCA	1 cut(s)	1394
MspA1I	CMGCKG	1 cut(s)	250
MspCI	CTTAAG	1 cut(s)	1055
MspR9I	CCNGG	6 cut(s)	61, 160, 211, 255, 294, 1525
MunI	CAATTG	1 cut(s)	1298
MvaI	CCWGG	2 cut(s)	211, 1525
MvnI	CGCG	4 cut(s)	83, 184, 320, 1359
NaeI	GCCGGC	3 cut(s)	180, 276, 333
NarI	GGCGCC	1 cut(s)	156
NciI	CCSGG	4 cut(s)	61, 160, 255, 294
NcoI	CCATGG	1 cut(s)	956
NdeII	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
NgoMIV	GCCGGC	3 cut(s)	178, 274, 331
NlaIII	CATG	7 cut(s)	687, 718, 960, 1031, 1117, 1477, 1499
NlaIV	GGNNCC	6 cut(s)	48, 157, 466, 1125, 1236, 1529
NmeAIII	GCCGAG	2 cut(s)	228, 647
NmuCI	GTSAC	4 cut(s)	70, 91, 854, 1501
NsiI	ATGCAT	1 cut(s)	685
NspI	RCATGY	2 cut(s)	687, 1031
PaeI	GCATGC	1 cut(s)	1031
PciSI	GCTCTTC	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	3 cut(s)	92, 101, 602
PdiI	GCCGGC	3 cut(s)	180, 276, 333
PdmI	GAANNNNTTC	2 cut(s)	365, 615
PfeI	GAWTC	1 cut(s)	394
PflFI	GACNNNGTC	1 cut(s)	127
PkrI	GCNGC	6 cut(s)	147, 252, 324, 1051, 1279, 1282
PleI	GAGTC	3 cut(s)	225, 1210, 1379
PluTI	GGCGCC	1 cut(s)	159
PpsI	GAGTC	3 cut(s)	225, 1210, 1379
PpuMI	RGGWCCY	1 cut(s)	46
PshAI	GACNNNNGTC	3 cut(s)	68, 89, 110
Psp124BI	GAGCTC	1 cut(s)	546
Psp5II	RGGWCCY	1 cut(s)	46
Psp6I	CCWGG	2 cut(s)	209, 1523
PspGI	CCWGG	2 cut(s)	209, 1523
PspN4I	GGNNCC	6 cut(s)	48, 157, 466, 1125, 1236, 1529
PspPI	GGNCC	3 cut(s)	46, 1124, 1306
PspPPI	RGGWCCY	1 cut(s)	46
PstNI	CAGNNNCTG	1 cut(s)	430
PsyI	GACNNNGTC	1 cut(s)	127
RsaI	GTAC	1 cut(s)	804
RsaNI	GTAC	1 cut(s)	803
RseI	CAYNNNNRTG	1 cut(s)	713
SacI	GAGCTC	1 cut(s)	546
SalI	GTCGAC	1 cut(s)	286
SapI	GCTCTTC	1 cut(s)	1176
SaqAI	TTAA	4 cut(s)	567, 860, 1056, 1403
SatI	GCNGC	6 cut(s)	146, 251, 323, 1050, 1278, 1281
Sau3AI	GATC	6 cut(s)	192, 570, 999, 1135, 1443, 1506
Sau96I	GGNCC	3 cut(s)	46, 1124, 1306
SchI	GAGTC	3 cut(s)	226, 1211, 1380
ScrFI	CCNGG	6 cut(s)	61, 160, 211, 255, 294, 1525
SduI	GDGCHC	8 cut(s)	176, 209, 392, 546, 852, 1108, 1350, 1415
SfaNI	GCATC	6 cut(s)	670, 670, 775, 889, 1303, 1340
SfoI	GGCGCC	1 cut(s)	157
SgrAI	CRCCGGYG	4 cut(s)	77, 178, 274, 331
SgrDI	CGTCGACG	1 cut(s)	286
SinI	GGWCC	2 cut(s)	46, 1124
SmiMI	CAYNNNNRTG	1 cut(s)	713
SmlI	CTYRAG	2 cut(s)	545, 1055
SmoI	CTYRAG	2 cut(s)	545, 1055
SphI	GCATGC	1 cut(s)	1031
SsiI	CCGC	6 cut(s)	38, 184, 227, 248, 323, 364
SspDI	GGCGCC	1 cut(s)	155
SspMI	CTAG	1 cut(s)	888
SstI	GAGCTC	1 cut(s)	546
StyD4I	CCNGG	6 cut(s)	59, 158, 209, 253, 292, 1523
StyI	CCWWGG	1 cut(s)	956
TaaI	ACNGT	3 cut(s)	70, 91, 854
TaiI	ACGT	3 cut(s)	191, 1048, 1144
TaqI	TCGA	7 cut(s)	191, 215, 287, 605, 1138, 1311, 1379
TatI	WGTACW	1 cut(s)	802
TauI	GCSGC	1 cut(s)	325
TfiI	GAWTC	1 cut(s)	394
Tru1I	TTAA	4 cut(s)	567, 860, 1056, 1403
Tru9I	TTAA	4 cut(s)	567, 860, 1056, 1403
TscAI	CASTG	1 cut(s)	14
TseFI	GTSAC	4 cut(s)	70, 91, 854, 1501
TseI	GCWGC	5 cut(s)	145, 250, 1049, 1277, 1280
Tsp45I	GTSAC	4 cut(s)	70, 91, 854, 1501
TspDTI	ATGAA	5 cut(s)	909, 923, 1102, 1142, 1462
TspGWI	ACGGA	4 cut(s)	68, 100, 1094, 1499
TspRI	CASTG	1 cut(s)	14
Tth111I	GACNNNGTC	1 cut(s)	127
Vha464I	CTTAAG	1 cut(s)	1055
VneI	GTGCAC	2 cut(s)	172, 848
VpaK11BI	GGWCC	2 cut(s)	46, 1124
XapI	RAATTY	8 cut(s)	457, 671, 750, 791, 807, 1180, 1268, 1487
XbaI	TCTAGA	1 cut(s)	887
XceI	RCATGY	2 cut(s)	687, 1031
XcmI	CCANNNNNNNNNTGG	1 cut(s)	954
XmiI	GTMKAC	1 cut(s)	287
XmnI	GAANNNNTTC	2 cut(s)	365, 615
XspI	CTAG	1 cut(s)	888
ZraI	GACGTC	1 cut(s)	189
Zsp2I	ATGCAT	1 cut(s)	685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.