BP28CT (NUC211) domain
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g18830 |
| rosa_chinensis | RchiOBHm_Chr1g0354361 |
| rosa_laevigata | RLG00000018687 RLG00000032846 |
| rosa_multiflora | Rmu_sc0033015.1_g000001 Rmu_sc0040727.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00298700 Rroxscaffold_4G00308750 |
| rosa_rugosa | Rorug05G0277500 |
| rosa_samantha | Rh1AG091400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 317 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 29 |
| AgsI | TTSAA | 1 cut(s) | 123 |
| AluBI | AGCT | 3 cut(s) | 45, 304, 402 |
| AluI | AGCT | 3 cut(s) | 45, 304, 402 |
| ApeKI | GCWGC | 1 cut(s) | 304 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 8, 40 |
| AseI | ATTAAT | 1 cut(s) | 288 |
| AspS9I | GGNCC | 1 cut(s) | 319 |
| AvaII | GGWCC | 1 cut(s) | 319 |
| BbvI | GCAGC | 1 cut(s) | 291 |
| BclI | TGATCA | 1 cut(s) | 100 |
| BisI | GCNGC | 1 cut(s) | 305 |
| BlpI | GCTNAGC | 2 cut(s) | 69, 383 |
| BlsI | GCNGC | 1 cut(s) | 306 |
| Bme18I | GGWCC | 1 cut(s) | 319 |
| BmgT120I | GGNCC | 1 cut(s) | 319 |
| BmsI | GCATC | 1 cut(s) | 142 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 69, 383 |
| BsaBI | GATNNNNATC | 1 cut(s) | 156 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 29 |
| Bse8I | GATNNNNATC | 1 cut(s) | 156 |
| BseGI | GGATG | 1 cut(s) | 177 |
| BseJI | GATNNNNATC | 1 cut(s) | 156 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 29 |
| BseMII | CTCAG | 1 cut(s) | 397 |
| BseXI | GCAGC | 1 cut(s) | 291 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 29 |
| Bsp143I | GATC | 1 cut(s) | 100 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 69, 383 |
| BspCNI | CTCAG | 1 cut(s) | 396 |
| BssMI | GATC | 1 cut(s) | 100 |
| Bst4CI | ACNGT | 2 cut(s) | 8, 275 |
| BstDEI | CTNAG | 2 cut(s) | 69, 383 |
| BstF5I | GGATG | 1 cut(s) | 177 |
| BstKTI | GATC | 1 cut(s) | 103 |
| BstMBI | GATC | 1 cut(s) | 100 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 161, 331 |
| BstV1I | GCAGC | 1 cut(s) | 291 |
| BtsCI | GGATG | 1 cut(s) | 177 |
| Cfr13I | GGNCC | 1 cut(s) | 319 |
| CviAII | CATG | 2 cut(s) | 205, 241 |
| CviJI | RGCY | 7 cut(s) | 22, 45, 130, 304, 334, 387, 402 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 45, 130, 304, 334, 387, 402 |
| DdeI | CTNAG | 2 cut(s) | 69, 383 |
| DpnI | GATC | 1 cut(s) | 102 |
| DpnII | GATC | 1 cut(s) | 100 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 317 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 317 |
| Eco47I | GGWCC | 1 cut(s) | 319 |
| FaeI | CATG | 2 cut(s) | 208, 244 |
| FaiI | YATR | 2 cut(s) | 206, 242 |
| FatI | CATG | 2 cut(s) | 204, 240 |
| FbaI | TGATCA | 1 cut(s) | 100 |
| Fnu4HI | GCNGC | 1 cut(s) | 305 |
| FokI | GGATG | 1 cut(s) | 184 |
| Fsp4HI | GCNGC | 1 cut(s) | 305 |
| GluI | GCNGC | 1 cut(s) | 305 |
| Hin1II | CATG | 2 cut(s) | 208, 244 |
| HinfI | GANTC | 1 cut(s) | 374 |
| Hpy166II | GTNNAC | 1 cut(s) | 223 |
| Hpy188I | TCNGA | 4 cut(s) | 100, 105, 285, 407 |
| Hpy188III | TCNNGA | 2 cut(s) | 296, 397 |
| Hpy8I | GTNNAC | 1 cut(s) | 223 |
| HpyAV | CCTTC | 3 cut(s) | 107, 372, 403 |
| HpyCH4III | ACNGT | 2 cut(s) | 8, 275 |
| HpyCH4V | TGCA | 2 cut(s) | 164, 278 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 161, 331 |
| HpyF3I | CTNAG | 2 cut(s) | 69, 383 |
| Hsp92II | CATG | 2 cut(s) | 208, 244 |
| Ksp22I | TGATCA | 1 cut(s) | 100 |
| Kzo9I | GATC | 1 cut(s) | 100 |
| LpnPI | CCDG | 4 cut(s) | 31, 293, 334, 335 |
| Lsp1109I | GCAGC | 1 cut(s) | 291 |
| LweI | GCATC | 1 cut(s) | 142 |
| MalI | GATC | 1 cut(s) | 102 |
| MboI | GATC | 1 cut(s) | 100 |
| MboII | GAAGA | 2 cut(s) | 51, 87 |
| MluCI | AATT | 3 cut(s) | 118, 208, 279 |
| MlyI | GAGTC | 1 cut(s) | 368 |
| MnlI | CCTC | 4 cut(s) | 7, 22, 46, 211 |
| MseI | TTAA | 2 cut(s) | 57, 288 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 161, 331 |
| NdeII | GATC | 1 cut(s) | 100 |
| NlaIII | CATG | 2 cut(s) | 208, 244 |
| PkrI | GCNGC | 1 cut(s) | 306 |
| PleI | GAGTC | 1 cut(s) | 368 |
| PpsI | GAGTC | 1 cut(s) | 368 |
| PshBI | ATTAAT | 1 cut(s) | 288 |
| PspPI | GGNCC | 1 cut(s) | 319 |
| SaqAI | TTAA | 2 cut(s) | 57, 288 |
| SatI | GCNGC | 1 cut(s) | 305 |
| Sau3AI | GATC | 1 cut(s) | 100 |
| Sau96I | GGNCC | 1 cut(s) | 319 |
| SchI | GAGTC | 1 cut(s) | 368 |
| SetI | ASST | 7 cut(s) | 47, 57, 118, 222, 232, 306, 404 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| SinI | GGWCC | 1 cut(s) | 319 |
| Sse9I | AATT | 3 cut(s) | 118, 208, 279 |
| TaaI | ACNGT | 2 cut(s) | 8, 275 |
| TaqI | TCGA | 2 cut(s) | 254, 344 |
| TasI | AATT | 3 cut(s) | 118, 208, 279 |
| Tru1I | TTAA | 2 cut(s) | 57, 288 |
| Tru9I | TTAA | 2 cut(s) | 57, 288 |
| TseI | GCWGC | 1 cut(s) | 304 |
| TspDTI | ATGAA | 3 cut(s) | 197, 221, 224 |
| VpaK11BI | GGWCC | 1 cut(s) | 319 |
| VspI | ATTAAT | 1 cut(s) | 288 |