RLG00000033320

AAA domain (dynein-related subfamily)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0009167
Physical Location & Seq
Reverse (-)
25666343 .. 25671652
5310 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033320

Sequence Viewer

Length: 2007 bp
ATGCTCCCCAACTGTGTTCATCTCTTTCACCCCCAACCTCTCTCAATCCCCAAACCCCTAATCCTACCTTTCTCTCCCAAATTCCAATGCAAGACCCAATCTTTTCCCCTTAAATCTTCACCAAACCCATCTTTCCCTCACTTACGCGCCAAAATTCCATCTGGGTATTCAAGGCCTGTTCTGGGTTGTTTGTGTTCTTTAACTTCATCATGTACTTCTTCACCGGAGGAGGAAGACTTCGACGTGGAGCTGGGCCGGCTTTTGGCCCTTTTGCCGGAGGAAATGCGGCAGAGAGTGACGGAGCACCCGGAGCTTCATCAGTTGATTGAAGTGGTTATGGATTTGGGCCGGAAGCCGCTGGCCCGGTTTCCCTCCGGCGACTTTGTGTTGTCGGAGAATCTGATTACGGTTCAGGATATTGAACAGGCTACTTGTCAGGTGGGTGATTTTGCCATTGACAACCGAGCAGGCATTAGCAGAACACTGCACCGGATTAGTGCCATTAGGAATCGAAAGGGTGCCATTATTGGTCTGACTTGTCGTGTTGGCAGGGCAATATCAGGTAGTGCTAGTTTGCTGCGAGATTTGGTTCGAGATGGCCTTTCTTTGTTGCTCATTGGGCCTCCCGGGGTAGGAAAAACAACAATTATCAGGGAAATAGCTCGGATGCTTGCAAATGATCATAAGAAACGTGTGATGATTGTCGACACCTCCAATGAGATTGGTGGGGATGGTGATATACCCCATGCAGGAATAGGCAATGCTCGGCGAATGCAAGTCCCTATCACTGATATGCAACATAAGGTCTTGATCGAAGCTGTTGAAAATCATATGCCACAAGTGATTGTAATTGATGAAATTGGCACTAAACTTGAAGCAATGGCTGCAAGCACAATTGCACAACGTGGAATCCAGCTAGTGGCCACCGCTCATGGAGTAACCATCGAGAATCTGATAATGAATCCTTCATTGGAAATGCTTGTTGGAGGTGTACAGAGTGTGACACTAGGAGATGAAGAGGCCAGCCGGAGGGGGGTTCAAAAGACAGTGCTAGAAAGGAAAGGACCTGCAACATTTAGTTGTGGGGTGGAGATAATTTCAAAGACTGAGTTAAGAGTTCATCCTAGCTTAGAAACAACAGTGGATGCTATCCTCTCAGGTCGTCTCCCAAATTTCGAAGTTCGCAAAATTAACTCTCAGGGATCAGAAGAAACTACTGTAAGAGAAAATTTGCTTTCCAGTTCCTTGGATGAACAAGATGATAATGTTACAGAAGATGCCAAAAATATGAGTGAGAAAGGATATGGTTATAATGATCTCACTCCTGAGGTCTCTCCATATATGCAAGTGGATTCCGGGGATGAAGGGATGGAACTTCGATTGTTTGTTTATGGGATCCTAGAAGCCACTGTGATGCAAGGGATAAAACAGTTGAAGATGGATGAGGCTGCTATCCAGTTAACAGATGATATCAGCAAGGCAGATGCACTATTCGCCATGCAATCCAAACTCAAGAAAAATCCCGGGATTCAGGCTGCTGCTAGATCTCATGGTACACCCATTTATGTGACGAAGACAAGCGCGTTGGTGGAAATAAAAAAGGCACTACGGTTATTATTGAATGATTATTACGGTGGTTTGAACGATTATGGACCAGTAGACAATATGCAATCGTCTGAGAAGGTTGATGCTCTTGAGGAGGCAAGAATAGCCATTGAGCAGGTTGTAATTCCAAAAGGGGAACCTGTAGAACTTCTTCCGAGGCCACCCCACATTATGTCTCTTCAGATTGACCTTATTCGCAAGTACAAATTAGATGCAGAAAGAATCGGTCAGGAGGCAGATGTGCGTCTCCGTGTCCTTCCATTTCATACTACAAGGATGGAAGAGAATCATACTAGCAAAAGAACCGATAATGATGATGAATTTGATGAAGTTCTGGGCACCAATGGTAACACGAATGGTTCACTTCCCACAGTGGAAAGGTTACCACTGCTTCCAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

669

Amino Acids

73.48

Weight (kDa)

5.48

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spore_III_AA PF19568 178 - 328 6.7e-12 Sporulation stage III, protein AA
AAA PF00004 203 - 289 4.1e-07 ATPase family associated with various cellular activities (AAA)
AAA_5 PF07728 203 - 288 6.7e-06 AAA domain (dynein-related subfamily)
AAA_18 PF13238 204 - 297 9.7e-06 AAA domain
PTPase PF25516 459 - 540 5e-25 Phosphotyrosine protein phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1311
Acc36I ACCTGC 2 cut(s) 1075, 1711
AccB1I GGYRCC 2 cut(s) 518, 1943
AccB7I CCANNNNNTGG 1 cut(s) 919
AccBSI CCGCTC 1 cut(s) 929
AccI GTMKAC 2 cut(s) 705, 1659
AccII CGCG 2 cut(s) 147, 1583
AciI CCGC 3 cut(s) 286, 356, 927
AclWI GGATC 3 cut(s) 1210, 1390, 1403
AcoI YGGCCR 1 cut(s) 921
AcsI RAATTY 5 cut(s) 80, 153, 1171, 1228, 1925
AcuI CTGAAG 1 cut(s) 1769
AdeI CACNNNGTG 1 cut(s) 905
AfaI GTAC 4 cut(s) 214, 993, 1555, 1808
AfiI CCNNNNNNNGG 8 cut(s) 182, 262, 274, 632, 749, 919, 1029, 1033
AflIII ACRYGT 1 cut(s) 691
AjiI CACGTC 1 cut(s) 244
AjuI GAANNNNNNNTTGG 4 cut(s) 953, 966, 985, 998
AluBI AGCT 6 cut(s) 250, 313, 662, 818, 916, 1128
AluI AGCT 6 cut(s) 250, 313, 662, 818, 916, 1128
Alw21I GWGCWC 1 cut(s) 306
Alw26I GTCTC 4 cut(s) 1169, 1336, 1785, 1856
AlwI GGATC 3 cut(s) 1210, 1390, 1403
Ama87I CYCGRG 2 cut(s) 626, 1523
ApeKI GCWGC 5 cut(s) 577, 884, 1448, 1535, 1538
ApoI RAATTY 5 cut(s) 80, 153, 1171, 1228, 1925
Asp700I GAANNNNTTC 1 cut(s) 1755
AspLEI GCGC 2 cut(s) 149, 1583
AspS9I GGNCC 7 cut(s) 253, 265, 346, 361, 620, 1064, 1652
AsuC2I CCSGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
AsuHPI GGTGA 5 cut(s) 20, 111, 213, 455, 746
AsuII TTCGAA 1 cut(s) 1176
AvaI CYCGRG 2 cut(s) 626, 1523
AvaII GGWCC 2 cut(s) 1064, 1652
AxyI CCTNAGG 1 cut(s) 1326
BaeGI GKGCMC 1 cut(s) 1946
BalI TGGCCA 1 cut(s) 923
BamHI GGATCC 1 cut(s) 1395
BanI GGYRCC 2 cut(s) 518, 1943
BarI GAAGNNNNNNTAC 2 cut(s) 1740, 1772
BbsI GAAGAC 2 cut(s) 240, 1580
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 5 cut(s) 564, 871, 1435, 1522, 1525
BccI CCATC 8 cut(s) 136, 166, 590, 725, 950, 1363, 1432, 1876
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
BcoDI GTCTC 4 cut(s) 1169, 1336, 1785, 1856
BfaI CTAG 8 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542, 1899
BfmI CTRYAG 1 cut(s) 1746
BfuAI ACCTGC 2 cut(s) 1075, 1711
BglII AGATCT 1 cut(s) 1544
BisI GCNGC 7 cut(s) 287, 356, 578, 885, 1449, 1536, 1539
BlsI GCNGC 7 cut(s) 288, 357, 579, 886, 1450, 1537, 1540
Bme1390I CCNGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
Bme18I GGWCC 2 cut(s) 1064, 1652
BmeT110I CYCGRG 2 cut(s) 626, 1523
BmgBI CACGTC 1 cut(s) 244
BmgT120I GGNCC 7 cut(s) 253, 265, 346, 361, 620, 1064, 1652
BmiI GGNNCC 4 cut(s) 520, 1397, 1743, 1945
BmrFI CCNGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
BmsI GCATC 7 cut(s) 657, 1135, 1267, 1404, 1474, 1678, 1807
BpiI GAAGAC 2 cut(s) 240, 1580
Bpu14I TTCGAA 1 cut(s) 1176
BpuEI CTTGAG 2 cut(s) 1496, 1715
BpuMI CCSGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
BsaI GGTCTC 1 cut(s) 1336
BsaJI CCNNGG 6 cut(s) 626, 627, 1245, 1356, 1523, 1760
BsaWI WCCGGW 2 cut(s) 223, 489
Bsc4I CCNNNNNNNGG 8 cut(s) 182, 262, 274, 632, 749, 919, 1029, 1033
Bse118I RCCGGY 1 cut(s) 255
Bse1I ACTGG 3 cut(s) 1239, 1456, 1655
Bse21I CCTNAGG 1 cut(s) 1326
Bse3DI GCAATG 2 cut(s) 766, 885
BseDI CCNNGG 6 cut(s) 626, 627, 1245, 1356, 1523, 1760
BseGI GGATG 9 cut(s) 672, 736, 1120, 1150, 1255, 1366, 1374, 1447, 1887
BseLI CCNNNNNNNGG 8 cut(s) 182, 262, 274, 632, 749, 919, 1029, 1033
BseMI GCAATG 2 cut(s) 766, 885
BseMII CTCAG 5 cut(s) 1098, 1170, 1211, 1317, 1668
BseNI ACTGG 3 cut(s) 1239, 1456, 1655
BseRI GAGGAG 2 cut(s) 242, 1712
BseSI GKGCMC 1 cut(s) 1946
BseXI GCAGC 5 cut(s) 564, 871, 1435, 1522, 1525
BseYI CCCAGC 1 cut(s) 250
BsgI GTGCAG 1 cut(s) 470
Bsh1236I CGCG 2 cut(s) 147, 1583
BshNI GGYRCC 2 cut(s) 518, 1943
BsiHKAI GWGCWC 1 cut(s) 306
BsiHKCI CYCGRG 2 cut(s) 626, 1523
BslFI GGGAC 1 cut(s) 764
BslI CCNNNNNNNGG 8 cut(s) 182, 262, 274, 632, 749, 919, 1029, 1033
BsmAI GTCTC 4 cut(s) 1169, 1336, 1785, 1856
BsmBI CGTCTC 2 cut(s) 1169, 1856
BsmFI GGGAC 1 cut(s) 764
BsmI GAATGC 1 cut(s) 777
Bso31I GGTCTC 1 cut(s) 1336
BsoBI CYCGRG 2 cut(s) 626, 1523
Bsp119I TTCGAA 1 cut(s) 1176
Bsp1286I GDGCHC 2 cut(s) 306, 1946
Bsp1407I TGTACA 1 cut(s) 991
Bsp143I GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
BspACI CCGC 3 cut(s) 286, 356, 927
BspCNI CTCAG 5 cut(s) 1099, 1169, 1210, 1318, 1669
BspFNI CGCG 2 cut(s) 147, 1583
BspLI GGNNCC 4 cut(s) 520, 1397, 1743, 1945
BspMI ACCTGC 2 cut(s) 1075, 1711
BspPI GGATC 3 cut(s) 1210, 1390, 1403
BspT104I TTCGAA 1 cut(s) 1176
BspT107I GGYRCC 2 cut(s) 518, 1943
BspTNI GGTCTC 1 cut(s) 1336
BsrBI CCGCTC 1 cut(s) 929
BsrDI GCAATG 2 cut(s) 766, 885
BsrFI RCCGGY 1 cut(s) 255
BsrGI TGTACA 1 cut(s) 991
BsrI ACTGG 3 cut(s) 1239, 1456, 1655
BssAI RCCGGY 1 cut(s) 255
BssECI CCNNGG 6 cut(s) 626, 627, 1245, 1356, 1523, 1760
BssMI GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
BssT1I CCWWGG 1 cut(s) 1245
Bst6I CTCTTC 3 cut(s) 1011, 1788, 1881
BstAPI GCANNNNNTGC 1 cut(s) 884
BstAUI TGTACA 1 cut(s) 991
BstBI TTCGAA 1 cut(s) 1176
BstC8I GCNNGC 6 cut(s) 257, 360, 469, 672, 889, 1024
BstDEI CTNAG 6 cut(s) 1107, 1129, 1156, 1197, 1326, 1677
BstEII GGTNACC 1 cut(s) 1986
BstF5I GGATG 9 cut(s) 672, 736, 1120, 1150, 1255, 1366, 1374, 1447, 1887
BstFNI CGCG 2 cut(s) 147, 1583
BstHHI GCGC 2 cut(s) 149, 1583
BstKTI GATC 6 cut(s) 682, 813, 1205, 1318, 1398, 1547
BstMAI GTCTC 4 cut(s) 1169, 1336, 1785, 1856
BstMBI GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
BstMWI GCNNNNNNNGC 6 cut(s) 256, 310, 619, 884, 1493, 1709
BstPI GGTNACC 1 cut(s) 1986
BstSCI CCNGG 7 cut(s) 306, 362, 625, 626, 1355, 1522, 1523
BstSFI CTRYAG 1 cut(s) 1746
BstSLI GKGCMC 1 cut(s) 1946
BstUI CGCG 2 cut(s) 147, 1583
BstV1I GCAGC 5 cut(s) 564, 871, 1435, 1522, 1525
BstV2I GAAGAC 2 cut(s) 240, 1580
BstX2I RGATCY 2 cut(s) 1395, 1544
BstXI CCANNNNNNTGG 1 cut(s) 1246
BstYI RGATCY 2 cut(s) 1395, 1544
Bsu36I CCTNAGG 1 cut(s) 1326
BtrI CACGTC 1 cut(s) 244
BtsCI GGATG 9 cut(s) 672, 736, 1120, 1150, 1255, 1366, 1374, 1447, 1887
BtsI GCAGTG 2 cut(s) 482, 1991
BtsIMutI CAGTG 7 cut(s) 482, 786, 1053, 1146, 1407, 1983, 1991
BveI ACCTGC 2 cut(s) 1075, 1711
Cac8I GCNNGC 6 cut(s) 257, 360, 469, 672, 889, 1024
CfoI GCGC 2 cut(s) 149, 1583
Cfr10I RCCGGY 1 cut(s) 255
Cfr13I GGNCC 7 cut(s) 253, 265, 346, 361, 620, 1064, 1652
Cfr9I CCCGGG 2 cut(s) 626, 1523
CseI GACGC 1 cut(s) 1838
Csp6I GTAC 4 cut(s) 213, 992, 1554, 1807
CviAII CATG 5 cut(s) 210, 746, 932, 1498, 1550
CviQI GTAC 4 cut(s) 213, 992, 1554, 1807
DdeI CTNAG 6 cut(s) 1107, 1129, 1156, 1197, 1326, 1677
DpnI GATC 6 cut(s) 681, 812, 1204, 1317, 1397, 1546
DpnII GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
DraIII CACNNNGTG 1 cut(s) 905
EaeI YGGCCR 1 cut(s) 921
Eam1104I CTCTTC 3 cut(s) 1011, 1788, 1881
EarI CTCTTC 3 cut(s) 1011, 1788, 1881
Eco130I CCWWGG 1 cut(s) 1245
Eco147I AGGCCT 1 cut(s) 175
Eco31I GGTCTC 1 cut(s) 1336
Eco32I GATATC 1 cut(s) 1471
Eco47I GGWCC 2 cut(s) 1064, 1652
Eco57I CTGAAG 1 cut(s) 1769
Eco81I CCTNAGG 1 cut(s) 1326
Eco88I CYCGRG 2 cut(s) 626, 1523
Eco91I GGTNACC 1 cut(s) 1986
EcoO109I RGGNCCY 1 cut(s) 1064
EcoO65I GGTNACC 1 cut(s) 1986
EcoRV GATATC 1 cut(s) 1471
EcoT14I CCWWGG 1 cut(s) 1245
ErhI CCWWGG 1 cut(s) 1245
Esp3I CGTCTC 2 cut(s) 1169, 1856
FaeI CATG 5 cut(s) 213, 749, 935, 1501, 1553
FaqI GGGAC 1 cut(s) 764
FatI CATG 5 cut(s) 209, 745, 931, 1497, 1549
FauNDI CATATG 1 cut(s) 831
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 2 cut(s) 705, 1659
Fnu4HI GCNGC 7 cut(s) 287, 356, 578, 885, 1449, 1536, 1539
FokI GGATG 9 cut(s) 679, 743, 1107, 1157, 1262, 1373, 1381, 1454, 1894
Fsp4HI GCNGC 7 cut(s) 287, 356, 578, 885, 1449, 1536, 1539
FspBI CTAG 8 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542, 1899
GlaI GCGC 2 cut(s) 148, 1582
GluI GCNGC 7 cut(s) 287, 356, 578, 885, 1449, 1536, 1539
GsaI CCCAGC 1 cut(s) 254
HgaI GACGC 1 cut(s) 1838
HhaI GCGC 2 cut(s) 149, 1583
Hin1II CATG 5 cut(s) 213, 749, 935, 1501, 1553
Hin6I GCGC 2 cut(s) 147, 1581
HinP1I GCGC 2 cut(s) 147, 1581
HincII GTYRAC 2 cut(s) 706, 1461
HindII GTYRAC 2 cut(s) 706, 1461
HinfI GANTC 9 cut(s) 397, 508, 909, 949, 961, 1352, 1528, 1827, 1891
HpaI GTTAAC 1 cut(s) 1461
HphI GGTGA 5 cut(s) 20, 111, 213, 455, 746
Hpy166II GTNNAC 6 cut(s) 706, 992, 1461, 1556, 1660, 1967
Hpy188I TCNGA 9 cut(s) 394, 402, 534, 666, 954, 1207, 1678, 1761, 1788
Hpy188III TCNNGA 9 cut(s) 413, 593, 808, 946, 1325, 1513, 1694, 1835, 2000
Hpy8I GTNNAC 6 cut(s) 706, 992, 1461, 1556, 1660, 1967
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 4 cut(s) 975, 1358, 1675, 1871
HpyCH4IV ACGT 3 cut(s) 243, 691, 904
HpyF10VI GCNNNNNNNGC 6 cut(s) 256, 310, 619, 884, 1493, 1709
HpyF3I CTNAG 6 cut(s) 1107, 1129, 1156, 1197, 1326, 1677
HpySE526I ACGT 3 cut(s) 243, 691, 904
Hsp92II CATG 5 cut(s) 213, 749, 935, 1501, 1553
HspAI GCGC 2 cut(s) 147, 1581
KroI GCCGGC 1 cut(s) 255
KroNI GCCGGC 1 cut(s) 257
Ksp22I TGATCA 1 cut(s) 679
KspAI GTTAAC 1 cut(s) 1461
Kzo9I GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
LmnI GCTCC 4 cut(s) 9, 247, 301, 310
Lsp1109I GCAGC 5 cut(s) 564, 871, 1435, 1522, 1525
LweI GCATC 7 cut(s) 657, 1135, 1267, 1404, 1474, 1678, 1807
MaeI CTAG 8 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542, 1899
MaeII ACGT 3 cut(s) 243, 691, 904
MaeIII GTNAC 7 cut(s) 295, 937, 1000, 1267, 1567, 1952, 1986
MalI GATC 6 cut(s) 681, 812, 1204, 1317, 1397, 1546
MbiI CCGCTC 1 cut(s) 929
MboI GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
MfeI CAATTG 1 cut(s) 894
MflI RGATCY 2 cut(s) 1395, 1544
MhlI GDGCHC 2 cut(s) 306, 1946
MlsI TGGCCA 1 cut(s) 923
MluNI TGGCCA 1 cut(s) 923
MmeI TCCRAC 2 cut(s) 372, 964
Mox20I TGGCCA 1 cut(s) 923
MroNI GCCGGC 1 cut(s) 255
MroXI GAANNNNTTC 1 cut(s) 1755
MscI TGGCCA 1 cut(s) 923
MseI TTAA 5 cut(s) 111, 200, 1112, 1191, 1460
MslI CAYNNNNRTG 3 cut(s) 791, 1412, 1565
Msp20I TGGCCA 1 cut(s) 923
MspA1I CMGCKG 1 cut(s) 358
MspR9I CCNGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
MunI CAATTG 1 cut(s) 894
Mva1269I GAATGC 1 cut(s) 777
MvnI CGCG 2 cut(s) 147, 1583
MwoI GCNNNNNNNGC 6 cut(s) 256, 310, 619, 884, 1493, 1709
NaeI GCCGGC 1 cut(s) 257
NciI CCSGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
NdeI CATATG 1 cut(s) 831
NdeII GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
NgoMIV GCCGGC 1 cut(s) 255
NlaIII CATG 5 cut(s) 213, 749, 935, 1501, 1553
NlaIV GGNNCC 4 cut(s) 520, 1397, 1743, 1945
NmeAIII GCCGAG 1 cut(s) 745
NmuCI GTSAC 3 cut(s) 295, 1000, 1567
NspV TTCGAA 1 cut(s) 1176
PceI AGGCCT 1 cut(s) 175
PctI GAATGC 1 cut(s) 777
PdiI GCCGGC 1 cut(s) 257
PdmI GAANNNNTTC 1 cut(s) 1755
PfeI GAWTC 9 cut(s) 397, 508, 909, 949, 961, 1352, 1528, 1827, 1891
PflMI CCANNNNNTGG 1 cut(s) 919
PkrI GCNGC 7 cut(s) 288, 357, 579, 886, 1450, 1537, 1540
PpuMI RGGWCCY 1 cut(s) 1064
PsiI TTATAA 1 cut(s) 1311
Psp5II RGGWCCY 1 cut(s) 1064
PspEI GGTNACC 1 cut(s) 1986
PspFI CCCAGC 1 cut(s) 250
PspN4I GGNNCC 4 cut(s) 520, 1397, 1743, 1945
PspPI GGNCC 7 cut(s) 253, 265, 346, 361, 620, 1064, 1652
PspPPI RGGWCCY 1 cut(s) 1064
PsuI RGATCY 2 cut(s) 1395, 1544
RsaI GTAC 4 cut(s) 214, 993, 1555, 1808
RsaNI GTAC 4 cut(s) 213, 992, 1554, 1807
RseI CAYNNNNRTG 3 cut(s) 791, 1412, 1565
SalI GTCGAC 1 cut(s) 704
SaqAI TTAA 5 cut(s) 111, 200, 1112, 1191, 1460
SatI GCNGC 7 cut(s) 287, 356, 578, 885, 1449, 1536, 1539
Sau3AI GATC 6 cut(s) 679, 810, 1202, 1315, 1395, 1544
Sau96I GGNCC 7 cut(s) 253, 265, 346, 361, 620, 1064, 1652
ScrFI CCNGG 7 cut(s) 308, 364, 627, 628, 1357, 1524, 1525
SduI GDGCHC 2 cut(s) 306, 1946
SfaNI GCATC 7 cut(s) 657, 1135, 1267, 1404, 1474, 1678, 1807
SfcI CTRYAG 1 cut(s) 1746
SfuI TTCGAA 1 cut(s) 1176
SinI GGWCC 2 cut(s) 1064, 1652
SmaI CCCGGG 2 cut(s) 628, 1525
SmiMI CAYNNNNRTG 3 cut(s) 791, 1412, 1565
SmlI CTYRAG 2 cut(s) 1511, 1694
SmoI CTYRAG 2 cut(s) 1511, 1694
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 3 cut(s) 286, 356, 927
SspMI CTAG 8 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542, 1899
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 7 cut(s) 306, 362, 625, 626, 1355, 1522, 1523
StyI CCWWGG 1 cut(s) 1245
TaiI ACGT 3 cut(s) 246, 694, 907
TaqI TCGA 8 cut(s) 240, 511, 592, 705, 813, 945, 1176, 1378
TaqII GACCGA 1 cut(s) 1820
TatI WGTACW 3 cut(s) 212, 991, 1806
TauI GCSGC 2 cut(s) 289, 358
TfiI GAWTC 9 cut(s) 397, 508, 909, 949, 961, 1352, 1528, 1827, 1891
Tru1I TTAA 5 cut(s) 111, 200, 1112, 1191, 1460
Tru9I TTAA 5 cut(s) 111, 200, 1112, 1191, 1460
TscAI CASTG 7 cut(s) 489, 793, 1053, 1146, 1414, 1983, 1998
TseFI GTSAC 3 cut(s) 295, 1000, 1567
TseI GCWGC 5 cut(s) 577, 884, 1448, 1535, 1538
Tsp45I GTSAC 3 cut(s) 295, 1000, 1567
TspGWI ACGGA 2 cut(s) 314, 1844
TspMI CCCGGG 2 cut(s) 626, 1523
TspRI CASTG 7 cut(s) 489, 793, 1053, 1146, 1414, 1983, 1998
Van91I CCANNNNNTGG 1 cut(s) 919
VpaK11BI GGWCC 2 cut(s) 1064, 1652
XapI RAATTY 5 cut(s) 80, 153, 1171, 1228, 1925
XmaI CCCGGG 2 cut(s) 626, 1523
XmiI GTMKAC 2 cut(s) 705, 1659
XmnI GAANNNNTTC 1 cut(s) 1755
XspI CTAG 8 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542, 1899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.