Rh5BG219200

AAA domain (dynein-related subfamily)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0009167
Physical Location & Seq
Reverse (-)
25252939 .. 25258950
6012 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG219200.1

Sequence Viewer

Length: 1776 bp
ATGCTCTCCAACTGTGTTCAACTCTTTCACCCCCAACCTCTCTCAATCCCCAAACCCCTAATCCTACCTCTCTCTCCCAAATTCCAATGCAAGACCCAATCTTTTCCCCTTAAATCTTCACCAAACCCATCTTTCCCTCACTTAGGCGCCAAAATTCCATCTGGGTGTGCAAGGCCTGTTCTGGGTTGTTTGTGTTCTTTAACTTCATCATGTACTTCTTCACCGGAGGAGGAAGACTTCGACGTGGAACTGGGCCGGCTTTTGGCCCTTTTGCCGGAGGAAATGCGGCAGCGAGTGACGGAGCACCCGGAGCTTCATCAGTTGATTGAAGTGGTTATGGATTTGGGCCGGAAGCCGCTGGCCCGGTTTCCCTCCGGCGACTTTGTGTTGTCGGAGAATCTGATTACTGTTCAGGATATTGAACAGGCTACTTCTCAGGTGGGTGATTTTGCCATTGACAACCGAGCAGGCATTAGCAGAACACTGCACCGGATTAGTGCCATTAGGAATCGAAAGGGTGCCATTATTGGTCTGACTTGTCGTGTTGGTAGGGCAATATCGGGTAGTGCTAGTTTGCTGCGAGATTTGGTTCGAGATGGCCTTTCTTTGTTGCTCATTGGGCCTCCTGGGGTAGGAAAAACAACAATTATCAGGGAAATAGCTCGGATGCTTGCAAATGATCATAAGAAACGTGTGATGATTGTCGACACCTCCAATGAGATTGGTGGGGATGGTGATATACCCCATGCAGGAATAGGCAATGCTCGGCGAATGCAAGTCCCTATCTCTGATATGCAACATAAGGTCTTGATAGAAGCTGTTGAAAATCATATGCCACAAGTGATTGTAATTGATGAAATTGGCACTAAACTTGAAGCAATGGCTGCAAGCACAATTGCACAACGTGGAATCCAGCTAGTGGCCACTGCTCATGGAGTAACCATCGAGAATCTGATAATGAATCCTTCATTGGAAATGCTTGTTGGAGGTGTACAGAGTGTGACACTAGGAGATGAAGAGGCCAGCCGGAGGGGGGTTCAAAAGACAGTGCTAGAAAGGAAAGGACCTGCAACATTTAGTTGTGGGGTGGAGATAATTTCAAAGACTGAGTTAAGAGTTCATCCTAGCTTAGAAACAACAGTGGATGCTATCCTCTCAGGTCGTTTCCCAAATTTCGAAGTTCGCAAAATTAACTCTCAGGGATCAGAAGAAACTACTGTAAGAGAAAATTTGCTCTCCAGTTCCTGGGATGAACAAGATGATAATGTTACAGAAGATGCCAAAAATATGAGTGAGAAAGGATATGGTTATAATGATCTCACTCCTGAGGTTTCTCCATATATGCAAGTGGATTCCGGGGATGAAGGGATGGAACTTCGATTGTTTGTTTATGGGATCCTAGAAGCCACTGTGATGCAAGGGATAAAACAGTTAAAGATGGATGAGGCTGCTATCCAGTTAACAGATGATATCAGCAAGGCAGATGCACTATTCGCCATGCAATCCAAGCTCAAGAAAAATCCCGGGATTCAGGCTGCTGCTAGATCTCATGGTACACCCATTTATGTGACTAAGACAAGCGCGTTGGTGGAAATAAAAAAGGCACTTCGGTTATTATTGAATGATTATTACGGTGGTTTGAATGATTATGGACCAGTAGACAATATGCAATCGTCTGAGAAGGTTGATGCTCTTGAGGTAATTATGGACCTTGTCAACCTCCACATTTTCAGAAAATTTATTGTGATTCTATTTTCTATTGATTTCTTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

591

Amino Acids

64.73

Weight (kDa)

5.58

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spore_III_AA PF19568 178 - 328 6e-12 Sporulation stage III, protein AA
AAA PF00004 203 - 289 2.2e-07 ATPase family associated with various cellular activities (AAA)
AAA_18 PF13238 204 - 297 8.9e-06 AAA domain
PTPase PF25516 459 - 540 4.2e-25 Phosphotyrosine protein phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1311
Acc36I ACCTGC 1 cut(s) 1075
AccB1I GGYRCC 2 cut(s) 146, 518
AccB7I CCANNNNNTGG 2 cut(s) 919, 1245
AccI GTMKAC 2 cut(s) 705, 1659
AccII CGCG 1 cut(s) 1583
AciI CCGC 2 cut(s) 286, 356
AclWI GGATC 3 cut(s) 1210, 1390, 1403
AcoI YGGCCR 1 cut(s) 921
AcsI RAATTY 5 cut(s) 80, 153, 1171, 1228, 1736
AcyI GRCGYC 1 cut(s) 147
AdeI CACNNNGTG 1 cut(s) 905
AfaI GTAC 3 cut(s) 214, 993, 1555
AflIII ACRYGT 1 cut(s) 691
AgsI TTSAA 9 cut(s) 20, 329, 422, 824, 875, 1040, 1101, 1621, 1642
AjiI CACGTC 1 cut(s) 244
AjnI CCWGG 2 cut(s) 625, 1244
AjuI GAANNNNNNNTTGG 4 cut(s) 953, 966, 985, 998
AluBI AGCT 6 cut(s) 313, 662, 818, 916, 1128, 1510
AluI AGCT 6 cut(s) 313, 662, 818, 916, 1128, 1510
Alw21I GWGCWC 1 cut(s) 306
AlwI GGATC 3 cut(s) 1210, 1390, 1403
AlwNI CAGNNNCTG 1 cut(s) 1245
Ama87I CYCGRG 1 cut(s) 1523
AoxI GGCC 9 cut(s) 173, 253, 264, 346, 360, 598, 620, 921, 1020
ApeKI GCWGC 6 cut(s) 289, 577, 884, 1448, 1535, 1538
ApoI RAATTY 5 cut(s) 80, 153, 1171, 1228, 1736
AspLEI GCGC 2 cut(s) 149, 1583
AspS9I GGNCC 8 cut(s) 253, 265, 346, 361, 620, 1064, 1652, 1708
AsuC2I CCSGG 5 cut(s) 308, 364, 1357, 1524, 1525
AsuHPI GGTGA 5 cut(s) 20, 111, 213, 455, 746
AsuII TTCGAA 1 cut(s) 1176
AvaI CYCGRG 1 cut(s) 1523
AvaII GGWCC 3 cut(s) 1064, 1652, 1708
AxyI CCTNAGG 1 cut(s) 1326
BalI TGGCCA 1 cut(s) 923
BamHI GGATCC 1 cut(s) 1395
BanI GGYRCC 2 cut(s) 146, 518
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 6 cut(s) 301, 564, 871, 1435, 1522, 1525
BccI CCATC 7 cut(s) 136, 166, 590, 725, 950, 1363, 1432
BciT130I CCWGG 2 cut(s) 627, 1246
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 5 cut(s) 308, 364, 1357, 1524, 1525
BfaI CTAG 7 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542
BfoI RGCGCY 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 1075
BglII AGATCT 1 cut(s) 1544
BisI GCNGC 8 cut(s) 287, 290, 356, 578, 885, 1449, 1536, 1539
BlsI GCNGC 8 cut(s) 288, 291, 357, 579, 886, 1450, 1537, 1540
Bme1390I CCNGG 7 cut(s) 308, 364, 627, 1246, 1357, 1524, 1525
Bme18I GGWCC 3 cut(s) 1064, 1652, 1708
BmeT110I CYCGRG 1 cut(s) 1523
BmgBI CACGTC 1 cut(s) 244
BmgT120I GGNCC 8 cut(s) 253, 265, 346, 361, 620, 1064, 1652, 1708
BmiI GGNNCC 3 cut(s) 148, 520, 1397
BmrFI CCNGG 7 cut(s) 308, 364, 627, 1246, 1357, 1524, 1525
BmrI ACTGGG 1 cut(s) 260
BmsI GCATC 6 cut(s) 657, 1135, 1267, 1404, 1474, 1678
BmuI ACTGGG 1 cut(s) 260
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 1222
Bpu14I TTCGAA 1 cut(s) 1176
BpuEI CTTGAG 2 cut(s) 1496, 1715
BpuMI CCSGG 5 cut(s) 308, 364, 1357, 1524, 1525
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 4 cut(s) 626, 1245, 1356, 1523
BsaWI WCCGGW 2 cut(s) 223, 489
Bse118I RCCGGY 1 cut(s) 255
Bse1I ACTGG 4 cut(s) 255, 1239, 1456, 1655
Bse21I CCTNAGG 1 cut(s) 1326
Bse3DI GCAATG 2 cut(s) 766, 885
BseBI CCWGG 2 cut(s) 627, 1246
BseDI CCNNGG 4 cut(s) 626, 1245, 1356, 1523
BseGI GGATG 8 cut(s) 672, 736, 1120, 1150, 1255, 1366, 1374, 1447
BseMI GCAATG 2 cut(s) 766, 885
BseMII CTCAG 6 cut(s) 449, 1098, 1170, 1211, 1317, 1668
BseNI ACTGG 4 cut(s) 255, 1239, 1456, 1655
BseRI GAGGAG 1 cut(s) 242
BseXI GCAGC 6 cut(s) 301, 564, 871, 1435, 1522, 1525
BsgI GTGCAG 1 cut(s) 470
Bsh1236I CGCG 1 cut(s) 1583
BshFI GGCC 9 cut(s) 175, 255, 266, 348, 362, 600, 622, 923, 1022
BshNI GGYRCC 2 cut(s) 146, 518
BsiHKAI GWGCWC 1 cut(s) 306
BsiHKCI CYCGRG 1 cut(s) 1523
BslFI GGGAC 1 cut(s) 764
BsmFI GGGAC 1 cut(s) 764
BsmI GAATGC 1 cut(s) 777
BsnI GGCC 9 cut(s) 175, 255, 266, 348, 362, 600, 622, 923, 1022
BsoBI CYCGRG 1 cut(s) 1523
Bsp119I TTCGAA 1 cut(s) 1176
Bsp1286I GDGCHC 1 cut(s) 306
Bsp1407I TGTACA 1 cut(s) 991
Bsp143I GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
BspACI CCGC 2 cut(s) 286, 356
BspANI GGCC 9 cut(s) 175, 255, 266, 348, 362, 600, 622, 923, 1022
BspCNI CTCAG 6 cut(s) 448, 1099, 1169, 1210, 1318, 1669
BspFNI CGCG 1 cut(s) 1583
BspLI GGNNCC 3 cut(s) 148, 520, 1397
BspMI ACCTGC 1 cut(s) 1075
BspPI GGATC 3 cut(s) 1210, 1390, 1403
BspT104I TTCGAA 1 cut(s) 1176
BspT107I GGYRCC 2 cut(s) 146, 518
BsrDI GCAATG 2 cut(s) 766, 885
BsrFI RCCGGY 1 cut(s) 255
BsrGI TGTACA 1 cut(s) 991
BsrI ACTGG 4 cut(s) 255, 1239, 1456, 1655
BssAI RCCGGY 1 cut(s) 255
BssECI CCNNGG 4 cut(s) 626, 1245, 1356, 1523
BssMI GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
BssNI GRCGYC 1 cut(s) 147
Bst2UI CCWGG 2 cut(s) 627, 1246
Bst4CI ACNGT 8 cut(s) 14, 409, 1048, 1141, 1219, 1411, 1431, 1634
Bst6I CTCTTC 1 cut(s) 1011
BstACI GRCGYC 1 cut(s) 147
BstAPI GCANNNNNTGC 1 cut(s) 884
BstAUI TGTACA 1 cut(s) 991
BstBI TTCGAA 1 cut(s) 1176
BstC8I GCNNGC 6 cut(s) 257, 360, 469, 672, 889, 1024
BstDEI CTNAG 9 cut(s) 142, 435, 1107, 1129, 1156, 1197, 1326, 1572, 1677
BstENI CCTNNNNNAGG 2 cut(s) 141, 630
BstF5I GGATG 8 cut(s) 672, 736, 1120, 1150, 1255, 1366, 1374, 1447
BstFNI CGCG 1 cut(s) 1583
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 2 cut(s) 149, 1583
BstKTI GATC 5 cut(s) 682, 1205, 1318, 1398, 1547
BstMBI GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
BstMWI GCNNNNNNNGC 5 cut(s) 310, 619, 884, 1493, 1507
BstNI CCWGG 2 cut(s) 627, 1246
BstSCI CCNGG 7 cut(s) 306, 362, 625, 1244, 1355, 1522, 1523
BstUI CGCG 1 cut(s) 1583
BstV1I GCAGC 6 cut(s) 301, 564, 871, 1435, 1522, 1525
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 2 cut(s) 1395, 1544
BstYI RGATCY 2 cut(s) 1395, 1544
Bsu36I CCTNAGG 1 cut(s) 1326
BsuRI GGCC 9 cut(s) 175, 255, 266, 348, 362, 600, 622, 923, 1022
BtrI CACGTC 1 cut(s) 244
BtsCI GGATG 8 cut(s) 672, 736, 1120, 1150, 1255, 1366, 1374, 1447
BtsI GCAGTG 2 cut(s) 482, 924
BtsIMutI CAGTG 5 cut(s) 482, 924, 1053, 1146, 1407
BveI ACCTGC 1 cut(s) 1075
Cac8I GCNNGC 6 cut(s) 257, 360, 469, 672, 889, 1024
CaiI CAGNNNCTG 1 cut(s) 1245
CfoI GCGC 2 cut(s) 149, 1583
Cfr10I RCCGGY 1 cut(s) 255
Cfr13I GGNCC 8 cut(s) 253, 265, 346, 361, 620, 1064, 1652, 1708
Cfr9I CCCGGG 1 cut(s) 1523
Csp6I GTAC 3 cut(s) 213, 992, 1554
CviAII CATG 5 cut(s) 210, 746, 932, 1498, 1550
CviQI GTAC 3 cut(s) 213, 992, 1554
DdeI CTNAG 9 cut(s) 142, 435, 1107, 1129, 1156, 1197, 1326, 1572, 1677
DinI GGCGCC 1 cut(s) 148
DpnI GATC 5 cut(s) 681, 1204, 1317, 1397, 1546
DpnII GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
DraIII CACNNNGTG 1 cut(s) 905
EaeI YGGCCR 1 cut(s) 921
Eam1104I CTCTTC 1 cut(s) 1011
EarI CTCTTC 1 cut(s) 1011
Eco147I AGGCCT 1 cut(s) 175
Eco32I GATATC 1 cut(s) 1471
Eco47I GGWCC 3 cut(s) 1064, 1652, 1708
Eco81I CCTNAGG 1 cut(s) 1326
Eco88I CYCGRG 1 cut(s) 1523
EcoNI CCTNNNNNAGG 2 cut(s) 141, 630
EcoO109I RGGNCCY 1 cut(s) 1064
EcoRII CCWGG 2 cut(s) 625, 1244
EcoRV GATATC 1 cut(s) 1471
EgeI GGCGCC 1 cut(s) 148
EheI GGCGCC 1 cut(s) 148
FaeI CATG 5 cut(s) 213, 749, 935, 1501, 1553
FaqI GGGAC 1 cut(s) 764
FatI CATG 5 cut(s) 209, 745, 931, 1497, 1549
FauNDI CATATG 1 cut(s) 831
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 2 cut(s) 705, 1659
Fnu4HI GCNGC 8 cut(s) 287, 290, 356, 578, 885, 1449, 1536, 1539
FokI GGATG 8 cut(s) 679, 743, 1107, 1157, 1262, 1373, 1381, 1454
Fsp4HI GCNGC 8 cut(s) 287, 290, 356, 578, 885, 1449, 1536, 1539
FspBI CTAG 7 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542
GlaI GCGC 2 cut(s) 148, 1582
GluI GCNGC 8 cut(s) 287, 290, 356, 578, 885, 1449, 1536, 1539
GsuI CTGGAG 1 cut(s) 1222
HaeII RGCGCY 1 cut(s) 150
HaeIII GGCC 9 cut(s) 175, 255, 266, 348, 362, 600, 622, 923, 1022
HhaI GCGC 2 cut(s) 149, 1583
Hin1I GRCGYC 1 cut(s) 147
Hin1II CATG 5 cut(s) 213, 749, 935, 1501, 1553
Hin6I GCGC 2 cut(s) 147, 1581
HinP1I GCGC 2 cut(s) 147, 1581
HincII GTYRAC 3 cut(s) 706, 1461, 1717
HindII GTYRAC 3 cut(s) 706, 1461, 1717
HinfI GANTC 8 cut(s) 397, 508, 909, 949, 961, 1352, 1528, 1747
HpaI GTTAAC 1 cut(s) 1461
HphI GGTGA 5 cut(s) 20, 111, 213, 455, 746
Hpy166II GTNNAC 6 cut(s) 706, 992, 1461, 1556, 1660, 1717
Hpy188I TCNGA 9 cut(s) 394, 402, 534, 666, 790, 954, 1207, 1678, 1733
Hpy188III TCNNGA 7 cut(s) 413, 593, 808, 946, 1325, 1513, 1694
Hpy8I GTNNAC 6 cut(s) 706, 992, 1461, 1556, 1660, 1717
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 3 cut(s) 975, 1358, 1675
HpyCH4III ACNGT 8 cut(s) 14, 409, 1048, 1141, 1219, 1411, 1431, 1634
HpyCH4IV ACGT 3 cut(s) 243, 691, 904
HpyF10VI GCNNNNNNNGC 5 cut(s) 310, 619, 884, 1493, 1507
HpyF3I CTNAG 9 cut(s) 142, 435, 1107, 1129, 1156, 1197, 1326, 1572, 1677
HpySE526I ACGT 3 cut(s) 243, 691, 904
Hsp92I GRCGYC 1 cut(s) 147
Hsp92II CATG 5 cut(s) 213, 749, 935, 1501, 1553
HspAI GCGC 2 cut(s) 147, 1581
KasI GGCGCC 1 cut(s) 146
KroI GCCGGC 1 cut(s) 255
KroNI GCCGGC 1 cut(s) 257
Ksp22I TGATCA 1 cut(s) 679
KspAI GTTAAC 1 cut(s) 1461
Kzo9I GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
LmnI GCTCC 2 cut(s) 301, 310
Lsp1109I GCAGC 6 cut(s) 301, 564, 871, 1435, 1522, 1525
LweI GCATC 6 cut(s) 657, 1135, 1267, 1404, 1474, 1678
MaeI CTAG 7 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542
MaeII ACGT 3 cut(s) 243, 691, 904
MaeIII GTNAC 5 cut(s) 295, 937, 1000, 1267, 1567
MalI GATC 5 cut(s) 681, 1204, 1317, 1397, 1546
MboI GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
MboII GAAGA 6 cut(s) 108, 210, 245, 1028, 1220, 1286
MfeI CAATTG 1 cut(s) 894
MflI RGATCY 2 cut(s) 1395, 1544
MhlI GDGCHC 1 cut(s) 306
MlsI TGGCCA 1 cut(s) 923
MluNI TGGCCA 1 cut(s) 923
Mly113I GGCGCC 1 cut(s) 147
MmeI TCCRAC 3 cut(s) 33, 372, 964
Mox20I TGGCCA 1 cut(s) 923
MroNI GCCGGC 1 cut(s) 255
MscI TGGCCA 1 cut(s) 923
MseI TTAA 7 cut(s) 111, 200, 1112, 1191, 1433, 1460, 1769
MslI CAYNNNNRTG 3 cut(s) 163, 1412, 1565
Msp20I TGGCCA 1 cut(s) 923
MspA1I CMGCKG 1 cut(s) 358
MspR9I CCNGG 7 cut(s) 308, 364, 627, 1246, 1357, 1524, 1525
MunI CAATTG 1 cut(s) 894
Mva1269I GAATGC 1 cut(s) 777
MvaI CCWGG 2 cut(s) 627, 1246
MvnI CGCG 1 cut(s) 1583
MwoI GCNNNNNNNGC 5 cut(s) 310, 619, 884, 1493, 1507
NaeI GCCGGC 1 cut(s) 257
NarI GGCGCC 1 cut(s) 147
NciI CCSGG 5 cut(s) 308, 364, 1357, 1524, 1525
NdeI CATATG 1 cut(s) 831
NdeII GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
NgoMIV GCCGGC 1 cut(s) 255
NlaIII CATG 5 cut(s) 213, 749, 935, 1501, 1553
NlaIV GGNNCC 3 cut(s) 148, 520, 1397
NmeAIII GCCGAG 1 cut(s) 745
NmuCI GTSAC 3 cut(s) 295, 1000, 1567
NspV TTCGAA 1 cut(s) 1176
PceI AGGCCT 1 cut(s) 175
PctI GAATGC 1 cut(s) 777
PdiI GCCGGC 1 cut(s) 257
PfeI GAWTC 8 cut(s) 397, 508, 909, 949, 961, 1352, 1528, 1747
PflFI GACNNNGTC 1 cut(s) 1712
PflMI CCANNNNNTGG 2 cut(s) 919, 1245
PkrI GCNGC 8 cut(s) 288, 291, 357, 579, 886, 1450, 1537, 1540
PluTI GGCGCC 1 cut(s) 150
PpuMI RGGWCCY 1 cut(s) 1064
PsiI TTATAA 1 cut(s) 1311
Psp5II RGGWCCY 1 cut(s) 1064
Psp6I CCWGG 2 cut(s) 625, 1244
PspGI CCWGG 2 cut(s) 625, 1244
PspN4I GGNNCC 3 cut(s) 148, 520, 1397
PspPI GGNCC 8 cut(s) 253, 265, 346, 361, 620, 1064, 1652, 1708
PspPPI RGGWCCY 1 cut(s) 1064
PstNI CAGNNNCTG 1 cut(s) 1245
PsuI RGATCY 2 cut(s) 1395, 1544
PsyI GACNNNGTC 1 cut(s) 1712
RsaI GTAC 3 cut(s) 214, 993, 1555
RsaNI GTAC 3 cut(s) 213, 992, 1554
RseI CAYNNNNRTG 3 cut(s) 163, 1412, 1565
SalI GTCGAC 1 cut(s) 704
SaqAI TTAA 7 cut(s) 111, 200, 1112, 1191, 1433, 1460, 1769
SatI GCNGC 8 cut(s) 287, 290, 356, 578, 885, 1449, 1536, 1539
Sau3AI GATC 5 cut(s) 679, 1202, 1315, 1395, 1544
Sau96I GGNCC 8 cut(s) 253, 265, 346, 361, 620, 1064, 1652, 1708
ScrFI CCNGG 7 cut(s) 308, 364, 627, 1246, 1357, 1524, 1525
SduI GDGCHC 1 cut(s) 306
SfaNI GCATC 6 cut(s) 657, 1135, 1267, 1404, 1474, 1678
SfoI GGCGCC 1 cut(s) 148
SfuI TTCGAA 1 cut(s) 1176
SinI GGWCC 3 cut(s) 1064, 1652, 1708
SmaI CCCGGG 1 cut(s) 1525
SmiMI CAYNNNNRTG 3 cut(s) 163, 1412, 1565
SmlI CTYRAG 2 cut(s) 1511, 1694
SmoI CTYRAG 2 cut(s) 1511, 1694
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 2 cut(s) 286, 356
SspDI GGCGCC 1 cut(s) 146
SspMI CTAG 7 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 7 cut(s) 306, 362, 625, 1244, 1355, 1522, 1523
TaaI ACNGT 8 cut(s) 14, 409, 1048, 1141, 1219, 1411, 1431, 1634
TaiI ACGT 3 cut(s) 246, 694, 907
TaqI TCGA 7 cut(s) 240, 511, 592, 705, 945, 1176, 1378
TatI WGTACW 2 cut(s) 212, 991
TauI GCSGC 2 cut(s) 289, 358
TfiI GAWTC 8 cut(s) 397, 508, 909, 949, 961, 1352, 1528, 1747
Tru1I TTAA 7 cut(s) 111, 200, 1112, 1191, 1433, 1460, 1769
Tru9I TTAA 7 cut(s) 111, 200, 1112, 1191, 1433, 1460, 1769
TscAI CASTG 5 cut(s) 489, 931, 1053, 1146, 1414
TseFI GTSAC 3 cut(s) 295, 1000, 1567
TseI GCWGC 6 cut(s) 289, 577, 884, 1448, 1535, 1538
Tsp45I GTSAC 3 cut(s) 295, 1000, 1567
TspDTI ATGAA 9 cut(s) 195, 305, 870, 957, 974, 1029, 1109, 1266, 1377
TspGWI ACGGA 1 cut(s) 314
TspMI CCCGGG 1 cut(s) 1523
TspRI CASTG 5 cut(s) 489, 931, 1053, 1146, 1414
Tth111I GACNNNGTC 1 cut(s) 1712
Van91I CCANNNNNTGG 2 cut(s) 919, 1245
VpaK11BI GGWCC 3 cut(s) 1064, 1652, 1708
XagI CCTNNNNNAGG 2 cut(s) 141, 630
XapI RAATTY 5 cut(s) 80, 153, 1171, 1228, 1736
XmaI CCCGGG 1 cut(s) 1523
XmiI GTMKAC 2 cut(s) 705, 1659
XspI CTAG 7 cut(s) 570, 917, 1007, 1052, 1125, 1400, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.