Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0009167

Physical Location & Seq

Genomic Coordinates Reverse (-)

26118869 .. 26124238

Gene Structure 5370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G020050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGCTCTCCAACTGTGTTCATCTCTTTCACCCCCAACCTCTCTCAATCCCCAAACCCCTAATCCTACCTCTCTCTCCCAAATTCCAATGCAAGACCCAATCTTTTCCCCTTAAATCTTCACCAAACCCATCTTTCCTTCACTTAGGCGCCAAAATTCCATCTGGGTATGCAAGGCCTGTTCTGGGTTGTTTGTGTTCTTTAACTTCATCATGTACTTCTTCACCGGAGGAGGAAGACTTCGACGTGGAACTGGGCCGGCTTTTGGCCCTTTTGCCGGAGGAAATGCGGCAGCGAGTGACGGAGCACCCGGAGCTTCATCAGTTGATTGAAGTGGTTATGGATTTGGGCCGGAAGCCGCTGGCCCGGTTTCCCTCCGGCGACTTTGTGGGTGATTTTGCCATTGACAACCGAGCAGGCATTAGCAGAACACTGCACCGGATTAGTGCCATTAGGAATCGAAAGGGTGTCATTATTGGTCTGACTTGTCGTGTTGGTAGGGCAATATCGGGTAGTGCTAGTTTGCTGCGAGATTTGGTTCGAGATGGCCTTTCTTTGTTGCTCATTGGGCCTCCTGGGGTAGGAAAAACAACAATTATCAGGGAAATAGCTCGGATGCTTGCAAATGATCATAAGAAACGTGTGATGATTGTCGACACCTCCAATGAGATTGGTGGGGATGGTGATATACCCCATGCAGGAATAGGCAATGCTCGGCGAATGCAAGTCCCTATCTCTGATATGCAACATAAGGTCTTGATAGAAGCTGTTGAAAATCATATGCCACAAGTGATTGTAATTGATGAAATTGGCACTAAACTTGAAGCAATGGCTGCAAGCACAATTGCACAACGTGGAATCCAGCTAGTGGCCACTGCTCATGGAGTAACCATCGAGAATCTGATAATGAATCCTTCATTGGAAATGCTTGTTGGAGGTGTACAGAGTGTGACACTAGGAGATGAAGAGGCCAGCCGGAGGGGGGTTCAAAAGACAGTGCTAGAAAGGAAAGGACCTGCAACCTTTAGTTGTGGGGTGGAGATAATTTCAAAGACTGAGTTAAGAGTTCATCCTAGCTTAGAAACAACAGTGGATGCTATCCTCTCAGGTCGTTTCCCAAATTTCGAAGTTCGCAAAATTAACTCTCAGGGATCAGAAGAAACTACTGTAAGAGAAAATTTGCTCTCCAGTTCCTGGGATGAACAAGATGATAATGTTACAGAAGATGCCAAAAATATGAGTGAGAAAGGATATGGTTATAACGATCTCACTCCTGAGGTTTCTCCATATATGCAAGTGGATTCCCGGGATGAAGGGATGGAACTTCGATTGTTTGTTTATGGGATCCTAGAAGCCACTGTGATGCAAGGGATAAAACAGTTAAAGATGGATGAGGCTGCTATCCAGTTAACAGATGATATCAGCAAGGCAGATGCACTATTCGCCATGCAATCGAAGCTCAAGAAAAATCCCGGGATTCAGGCTGCTGCTAGATCTCATGGTACACCCATTTATGTGACTAAGACAAGCGCGTTGGTGGAAATAAAAAAGGCACTTCGGTTATTATTGAATGATTATTACGGTGGTTTGAATGATTATGGACCAGTAGACAATATGCAATCGTCTGAGAAGGTTGATGCTCTTGAGGAGGCAAGAATAGCCATTGAGCAGGTTGTAATTCCAAAAGGGGAACCTGTAGAACTTCTTCCGAGGCCACCCCACATTGAGGCAGATGTGCGTCTCCGTATCCTTCCATTTCATACCACAAGGATGGAAGAGAATCATACTAGCAAAAGAACCGATAATGATGATGATGATGAATTTGATGAAGTTCTGGGCACCAATGGTAACACGGTTCACTTCTCACAGTGGAAAGGTTACCACTGCTTCCAGATTAGTGAGTCAGATGTGACCAATTTAGAGCATTGGTACCTTTTCTTGCTCATATTCAGAGGCCACATTGTGAGCAGTGAGCACTGTGGCAATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

662

Amino Acids

73.16

Weight (kDa)

5.61

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Spore_III_AA	PF19568	159 - 310	7.2e-12	Sporulation stage III, protein AA
AAA	PF00004	185 - 271	2.7e-07	ATPase family associated with various cellular activities (AAA)
PTPase	PF25516	441 - 522	4.9e-25	Phosphotyrosine protein phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73170 AT1G73170 AT1G73170 AT1G73170
fragaria_vesca	FvH4_3g18730 FvH4_3g18730 FvH4_3g18730
malus_domestica	MD11G1259100.v1.1
prunus_persica	Prupe.4G171000_v2.0.a1 Prupe.4G171000_v2.0.a1 Prupe.4G171000_v2.0.a1
pyrus_communis	pycom11g22860
rosa_chinensis	RchiOBHm_Chr5g0031521
rosa_laevigata	RLG00000033320
rosa_multiflora	Rmu_sc0009888.1_g000011
rosa_roxburghii	Rroxscaffold_1G00048770
rosa_rugosa	Rorug05G0126900
rosa_samantha	Rh5AG219800 Rh5BG219200 Rh5CG242800 Rh5DG224600
rosa_wichuraiana	Rw5G020050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1257
Acc36I	ACCTGC	2 cut(s)	1021, 1657
Acc65I	GGTACC	1 cut(s)	1926
AccB1I	GGYRCC	3 cut(s)	146, 1835, 1926
AccB7I	CCANNNNNTGG	2 cut(s)	865, 1191
AccI	GTMKAC	2 cut(s)	651, 1605
AccII	CGCG	1 cut(s)	1529
AciI	CCGC	2 cut(s)	286, 356
AclWI	GGATC	3 cut(s)	1156, 1336, 1349
AcoI	YGGCCR	1 cut(s)	867
AcsI	RAATTY	5 cut(s)	80, 153, 1117, 1174, 1817
AcyI	GRCGYC	1 cut(s)	147
AdeI	CACNNNGTG	2 cut(s)	851, 1960
AfaI	GTAC	4 cut(s)	214, 939, 1501, 1928
AflIII	ACRYGT	1 cut(s)	637
AgsI	TTSAA	7 cut(s)	329, 770, 821, 986, 1047, 1567, 1588
AjiI	CACGTC	1 cut(s)	244
AjnI	CCWGG	2 cut(s)	571, 1190
AjuI	GAANNNNNNNTTGG	4 cut(s)	899, 912, 931, 944
AluBI	AGCT	6 cut(s)	313, 608, 764, 862, 1074, 1456
AluI	AGCT	6 cut(s)	313, 608, 764, 862, 1074, 1456
Alw21I	GWGCWC	2 cut(s)	306, 1974
Alw26I	GTCTC	1 cut(s)	1742
AlwI	GGATC	3 cut(s)	1156, 1336, 1349
AlwNI	CAGNNNCTG	1 cut(s)	1191
Ama87I	CYCGRG	2 cut(s)	1302, 1469
ApeKI	GCWGC	6 cut(s)	289, 523, 830, 1394, 1481, 1484
ApoI	RAATTY	5 cut(s)	80, 153, 1117, 1174, 1817
Asp700I	GAANNNNTTC	1 cut(s)	1701
Asp718I	GGTACC	1 cut(s)	1926
AspLEI	GCGC	2 cut(s)	149, 1529
AspS9I	GGNCC	7 cut(s)	253, 265, 346, 361, 566, 1010, 1598
AsuC2I	CCSGG	6 cut(s)	308, 364, 1303, 1304, 1470, 1471
AsuHPI	GGTGA	5 cut(s)	20, 111, 213, 401, 692
AsuII	TTCGAA	1 cut(s)	1122
AvaI	CYCGRG	2 cut(s)	1302, 1469
AvaII	GGWCC	2 cut(s)	1010, 1598
AxyI	CCTNAGG	1 cut(s)	1272
BaeGI	GKGCMC	1 cut(s)	1838
BalI	TGGCCA	1 cut(s)	869
BamHI	GGATCC	1 cut(s)	1341
BanI	GGYRCC	3 cut(s)	146, 1835, 1926
BarI	GAAGNNNNNNTAC	2 cut(s)	1686, 1718
BbsI	GAAGAC	1 cut(s)	240
Bbv12I	GWGCWC	2 cut(s)	306, 1974
BbvI	GCAGC	6 cut(s)	301, 510, 817, 1381, 1468, 1471
BccI	CCATC	8 cut(s)	136, 166, 536, 671, 896, 1309, 1378, 1762
BciT130I	CCWGG	2 cut(s)	573, 1192
BciVI	GTATCC	1 cut(s)	1754
BclI	TGATCA	1 cut(s)	625
BcnI	CCSGG	6 cut(s)	308, 364, 1303, 1304, 1470, 1471
BcoDI	GTCTC	1 cut(s)	1742
BfaI	CTAG	8 cut(s)	516, 863, 953, 998, 1071, 1346, 1488, 1785
BfmI	CTRYAG	1 cut(s)	1692
BfoI	RGCGCY	1 cut(s)	150
BfuAI	ACCTGC	2 cut(s)	1021, 1657
BfuI	GTATCC	1 cut(s)	1754
BglII	AGATCT	1 cut(s)	1490
BisI	GCNGC	8 cut(s)	287, 290, 356, 524, 831, 1395, 1482, 1485
BlsI	GCNGC	8 cut(s)	288, 291, 357, 525, 832, 1396, 1483, 1486
Bme1390I	CCNGG	8 cut(s)	308, 364, 573, 1192, 1303, 1304, 1470, 1471
Bme18I	GGWCC	2 cut(s)	1010, 1598
BmeT110I	CYCGRG	2 cut(s)	1302, 1469
BmgBI	CACGTC	1 cut(s)	244
BmgT120I	GGNCC	7 cut(s)	253, 265, 346, 361, 566, 1010, 1598
BmiI	GGNNCC	5 cut(s)	148, 1343, 1689, 1837, 1928
BmrFI	CCNGG	8 cut(s)	308, 364, 573, 1192, 1303, 1304, 1470, 1471
BmrI	ACTGGG	1 cut(s)	260
BmsI	GCATC	6 cut(s)	603, 1081, 1213, 1350, 1420, 1624
BmuI	ACTGGG	1 cut(s)	260
BpiI	GAAGAC	1 cut(s)	240
BpmI	CTGGAG	1 cut(s)	1168
Bpu14I	TTCGAA	1 cut(s)	1122
BpuEI	CTTGAG	2 cut(s)	1442, 1661
BpuMI	CCSGG	6 cut(s)	308, 364, 1303, 1304, 1470, 1471
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	5 cut(s)	572, 1191, 1302, 1469, 1706
BsaWI	WCCGGW	2 cut(s)	223, 435
Bse118I	RCCGGY	1 cut(s)	255
Bse1I	ACTGG	4 cut(s)	255, 1185, 1402, 1601
Bse21I	CCTNAGG	1 cut(s)	1272
Bse3DI	GCAATG	3 cut(s)	712, 831, 1987
BseBI	CCWGG	2 cut(s)	573, 1192
BseDI	CCNNGG	5 cut(s)	572, 1191, 1302, 1469, 1706
BseGI	GGATG	9 cut(s)	618, 682, 1066, 1096, 1201, 1312, 1320, 1393, 1773
BseMI	GCAATG	3 cut(s)	712, 831, 1987
BseMII	CTCAG	5 cut(s)	1044, 1116, 1157, 1263, 1614
BseNI	ACTGG	4 cut(s)	255, 1185, 1402, 1601
BseRI	GAGGAG	2 cut(s)	242, 1658
BseSI	GKGCMC	1 cut(s)	1838
BseXI	GCAGC	6 cut(s)	301, 510, 817, 1381, 1468, 1471
BsgI	GTGCAG	1 cut(s)	416
Bsh1236I	CGCG	1 cut(s)	1529
BshNI	GGYRCC	3 cut(s)	146, 1835, 1926
BsiHKAI	GWGCWC	2 cut(s)	306, 1974
BsiHKCI	CYCGRG	2 cut(s)	1302, 1469
BslFI	GGGAC	1 cut(s)	710
BsmAI	GTCTC	1 cut(s)	1742
BsmBI	CGTCTC	1 cut(s)	1742
BsmFI	GGGAC	1 cut(s)	710
BsmI	GAATGC	1 cut(s)	723
BsoBI	CYCGRG	2 cut(s)	1302, 1469
Bsp119I	TTCGAA	1 cut(s)	1122
Bsp1286I	GDGCHC	3 cut(s)	306, 1838, 1974
Bsp1407I	TGTACA	1 cut(s)	937
Bsp143I	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
BspACI	CCGC	2 cut(s)	286, 356
BspCNI	CTCAG	5 cut(s)	1045, 1115, 1156, 1264, 1615
BspFNI	CGCG	1 cut(s)	1529
BspLI	GGNNCC	5 cut(s)	148, 1343, 1689, 1837, 1928
BspMI	ACCTGC	2 cut(s)	1021, 1657
BspPI	GGATC	3 cut(s)	1156, 1336, 1349
BspT104I	TTCGAA	1 cut(s)	1122
BspT107I	GGYRCC	3 cut(s)	146, 1835, 1926
BsrDI	GCAATG	3 cut(s)	712, 831, 1987
BsrFI	RCCGGY	1 cut(s)	255
BsrGI	TGTACA	1 cut(s)	937
BsrI	ACTGG	4 cut(s)	255, 1185, 1402, 1601
BssAI	RCCGGY	1 cut(s)	255
BssECI	CCNNGG	5 cut(s)	572, 1191, 1302, 1469, 1706
BssMI	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
BssNI	GRCGYC	1 cut(s)	147
Bst2UI	CCWGG	2 cut(s)	573, 1192
Bst6I	CTCTTC	2 cut(s)	957, 1767
BstACI	GRCGYC	1 cut(s)	147
BstAPI	GCANNNNNTGC	1 cut(s)	830
BstAUI	TGTACA	1 cut(s)	937
BstBI	TTCGAA	1 cut(s)	1122
BstC8I	GCNNGC	6 cut(s)	257, 360, 415, 618, 835, 970
BstDEI	CTNAG	8 cut(s)	142, 1053, 1075, 1102, 1143, 1272, 1518, 1623
BstEII	GGTNACC	1 cut(s)	1874
BstENI	CCTNNNNNAGG	1 cut(s)	576
BstF5I	GGATG	9 cut(s)	618, 682, 1066, 1096, 1201, 1312, 1320, 1393, 1773
BstFNI	CGCG	1 cut(s)	1529
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	2 cut(s)	149, 1529
BstKTI	GATC	5 cut(s)	628, 1151, 1264, 1344, 1493
BstMAI	GTCTC	1 cut(s)	1742
BstMBI	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
BstMWI	GCNNNNNNNGC	6 cut(s)	310, 565, 830, 1439, 1453, 1655
BstNI	CCWGG	2 cut(s)	573, 1192
BstPI	GGTNACC	1 cut(s)	1874
BstSCI	CCNGG	8 cut(s)	306, 362, 571, 1190, 1301, 1302, 1468, 1469
BstSFI	CTRYAG	1 cut(s)	1692
BstSLI	GKGCMC	1 cut(s)	1838
BstUI	CGCG	1 cut(s)	1529
BstV1I	GCAGC	6 cut(s)	301, 510, 817, 1381, 1468, 1471
BstV2I	GAAGAC	1 cut(s)	240
BstX2I	RGATCY	2 cut(s)	1341, 1490
BstXI	CCANNNNNNTGG	1 cut(s)	1768
BstYI	RGATCY	2 cut(s)	1341, 1490
Bsu36I	CCTNAGG	1 cut(s)	1272
BsuI	GTATCC	1 cut(s)	1754
BtrI	CACGTC	1 cut(s)	244
BtsCI	GGATG	9 cut(s)	618, 682, 1066, 1096, 1201, 1312, 1320, 1393, 1773
BtsI	GCAGTG	4 cut(s)	428, 870, 1879, 1972
BtsIMutI	CAGTG	9 cut(s)	428, 870, 999, 1092, 1353, 1871, 1879, 1972, 1972
BveI	ACCTGC	2 cut(s)	1021, 1657
Cac8I	GCNNGC	6 cut(s)	257, 360, 415, 618, 835, 970
CaiI	CAGNNNCTG	1 cut(s)	1191
CfoI	GCGC	2 cut(s)	149, 1529
Cfr10I	RCCGGY	1 cut(s)	255
Cfr13I	GGNCC	7 cut(s)	253, 265, 346, 361, 566, 1010, 1598
Cfr9I	CCCGGG	2 cut(s)	1302, 1469
CseI	GACGC	1 cut(s)	1724
Csp6I	GTAC	4 cut(s)	213, 938, 1500, 1927
CviAII	CATG	5 cut(s)	210, 692, 878, 1444, 1496
CviQI	GTAC	4 cut(s)	213, 938, 1500, 1927
DdeI	CTNAG	8 cut(s)	142, 1053, 1075, 1102, 1143, 1272, 1518, 1623
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	5 cut(s)	627, 1150, 1263, 1343, 1492
DpnII	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
DraIII	CACNNNGTG	2 cut(s)	851, 1960
EaeI	YGGCCR	1 cut(s)	867
Eam1104I	CTCTTC	2 cut(s)	957, 1767
EarI	CTCTTC	2 cut(s)	957, 1767
Eco147I	AGGCCT	1 cut(s)	175
Eco32I	GATATC	1 cut(s)	1417
Eco47I	GGWCC	2 cut(s)	1010, 1598
Eco81I	CCTNAGG	1 cut(s)	1272
Eco88I	CYCGRG	2 cut(s)	1302, 1469
Eco91I	GGTNACC	1 cut(s)	1874
EcoNI	CCTNNNNNAGG	1 cut(s)	576
EcoO109I	RGGNCCY	1 cut(s)	1010
EcoO65I	GGTNACC	1 cut(s)	1874
EcoRII	CCWGG	2 cut(s)	571, 1190
EcoRV	GATATC	1 cut(s)	1417
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
Esp3I	CGTCTC	1 cut(s)	1742
FaeI	CATG	5 cut(s)	213, 695, 881, 1447, 1499
FaqI	GGGAC	1 cut(s)	710
FatI	CATG	5 cut(s)	209, 691, 877, 1443, 1495
FauNDI	CATATG	1 cut(s)	777
FbaI	TGATCA	1 cut(s)	625
FblI	GTMKAC	2 cut(s)	651, 1605
Fnu4HI	GCNGC	8 cut(s)	287, 290, 356, 524, 831, 1395, 1482, 1485
FokI	GGATG	9 cut(s)	625, 689, 1053, 1103, 1208, 1319, 1327, 1400, 1780
Fsp4HI	GCNGC	8 cut(s)	287, 290, 356, 524, 831, 1395, 1482, 1485
FspBI	CTAG	8 cut(s)	516, 863, 953, 998, 1071, 1346, 1488, 1785
GlaI	GCGC	2 cut(s)	148, 1528
GluI	GCNGC	8 cut(s)	287, 290, 356, 524, 831, 1395, 1482, 1485
GsuI	CTGGAG	1 cut(s)	1168
HaeII	RGCGCY	1 cut(s)	150
HgaI	GACGC	1 cut(s)	1724
HhaI	GCGC	2 cut(s)	149, 1529
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	5 cut(s)	213, 695, 881, 1447, 1499
Hin6I	GCGC	2 cut(s)	147, 1527
HinP1I	GCGC	2 cut(s)	147, 1527
HincII	GTYRAC	2 cut(s)	652, 1407
HindII	GTYRAC	2 cut(s)	652, 1407
HinfI	GANTC	8 cut(s)	454, 855, 895, 907, 1298, 1474, 1777, 1898
HpaI	GTTAAC	1 cut(s)	1407
HphI	GGTGA	5 cut(s)	20, 111, 213, 401, 692
Hpy166II	GTNNAC	6 cut(s)	652, 938, 1407, 1502, 1606, 1855
Hpy188I	TCNGA	9 cut(s)	480, 612, 736, 900, 1153, 1624, 1707, 1903, 1949
Hpy188III	TCNNGA	7 cut(s)	539, 754, 892, 1271, 1459, 1640, 1888
Hpy8I	GTNNAC	6 cut(s)	652, 938, 1407, 1502, 1606, 1855
Hpy99I	CGWCG	1 cut(s)	245
HpyAV	CCTTC	5 cut(s)	146, 921, 1304, 1621, 1757
HpyCH4IV	ACGT	3 cut(s)	243, 637, 850
HpyF10VI	GCNNNNNNNGC	6 cut(s)	310, 565, 830, 1439, 1453, 1655
HpyF3I	CTNAG	8 cut(s)	142, 1053, 1075, 1102, 1143, 1272, 1518, 1623
HpySE526I	ACGT	3 cut(s)	243, 637, 850
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	5 cut(s)	213, 695, 881, 1447, 1499
HspAI	GCGC	2 cut(s)	147, 1527
KasI	GGCGCC	1 cut(s)	146
KpnI	GGTACC	1 cut(s)	1930
KroI	GCCGGC	1 cut(s)	255
KroNI	GCCGGC	1 cut(s)	257
Ksp22I	TGATCA	1 cut(s)	625
KspAI	GTTAAC	1 cut(s)	1407
Kzo9I	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
LmnI	GCTCC	2 cut(s)	301, 310
Lsp1109I	GCAGC	6 cut(s)	301, 510, 817, 1381, 1468, 1471
LweI	GCATC	6 cut(s)	603, 1081, 1213, 1350, 1420, 1624
MaeI	CTAG	8 cut(s)	516, 863, 953, 998, 1071, 1346, 1488, 1785
MaeII	ACGT	3 cut(s)	243, 637, 850
MaeIII	GTNAC	8 cut(s)	295, 883, 946, 1213, 1513, 1844, 1874, 1906
MalI	GATC	5 cut(s)	627, 1150, 1263, 1343, 1492
MboI	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
MboII	GAAGA	8 cut(s)	108, 210, 245, 974, 1166, 1232, 1694, 1784
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	2 cut(s)	1341, 1490
MhlI	GDGCHC	3 cut(s)	306, 1838, 1974
MlsI	TGGCCA	1 cut(s)	869
MluNI	TGGCCA	1 cut(s)	869
Mly113I	GGCGCC	1 cut(s)	147
MlyI	GAGTC	1 cut(s)	1907
MmeI	TCCRAC	2 cut(s)	33, 910
Mox20I	TGGCCA	1 cut(s)	869
MroNI	GCCGGC	1 cut(s)	255
MroXI	GAANNNNTTC	1 cut(s)	1701
MscI	TGGCCA	1 cut(s)	869
MseI	TTAA	6 cut(s)	111, 200, 1058, 1137, 1379, 1406
MslI	CAYNNNNRTG	3 cut(s)	1358, 1511, 1766
Msp20I	TGGCCA	1 cut(s)	869
MspA1I	CMGCKG	1 cut(s)	358
MspR9I	CCNGG	8 cut(s)	308, 364, 573, 1192, 1303, 1304, 1470, 1471
MunI	CAATTG	1 cut(s)	840
Mva1269I	GAATGC	1 cut(s)	723
MvaI	CCWGG	2 cut(s)	573, 1192
MvnI	CGCG	1 cut(s)	1529
MwoI	GCNNNNNNNGC	6 cut(s)	310, 565, 830, 1439, 1453, 1655
NaeI	GCCGGC	1 cut(s)	257
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	6 cut(s)	308, 364, 1303, 1304, 1470, 1471
NdeI	CATATG	1 cut(s)	777
NdeII	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
NgoMIV	GCCGGC	1 cut(s)	255
NlaIII	CATG	5 cut(s)	213, 695, 881, 1447, 1499
NlaIV	GGNNCC	5 cut(s)	148, 1343, 1689, 1837, 1928
NmeAIII	GCCGAG	1 cut(s)	691
NmuCI	GTSAC	4 cut(s)	295, 946, 1513, 1906
NspV	TTCGAA	1 cut(s)	1122
PceI	AGGCCT	1 cut(s)	175
PctI	GAATGC	1 cut(s)	723
PdiI	GCCGGC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	1701
PfeI	GAWTC	7 cut(s)	454, 855, 895, 907, 1298, 1474, 1777
PflMI	CCANNNNNTGG	2 cut(s)	865, 1191
PkrI	GCNGC	8 cut(s)	288, 291, 357, 525, 832, 1396, 1483, 1486
PleI	GAGTC	1 cut(s)	1906
PluTI	GGCGCC	1 cut(s)	150
PpsI	GAGTC	1 cut(s)	1906
PpuMI	RGGWCCY	1 cut(s)	1010
PsiI	TTATAA	1 cut(s)	1257
Psp5II	RGGWCCY	1 cut(s)	1010
Psp6I	CCWGG	2 cut(s)	571, 1190
PspEI	GGTNACC	1 cut(s)	1874
PspGI	CCWGG	2 cut(s)	571, 1190
PspN4I	GGNNCC	5 cut(s)	148, 1343, 1689, 1837, 1928
PspPI	GGNCC	7 cut(s)	253, 265, 346, 361, 566, 1010, 1598
PspPPI	RGGWCCY	1 cut(s)	1010
PstNI	CAGNNNCTG	1 cut(s)	1191
PsuI	RGATCY	2 cut(s)	1341, 1490
RsaI	GTAC	4 cut(s)	214, 939, 1501, 1928
RsaNI	GTAC	4 cut(s)	213, 938, 1500, 1927
RseI	CAYNNNNRTG	3 cut(s)	1358, 1511, 1766
SalI	GTCGAC	1 cut(s)	650
SaqAI	TTAA	6 cut(s)	111, 200, 1058, 1137, 1379, 1406
SatI	GCNGC	8 cut(s)	287, 290, 356, 524, 831, 1395, 1482, 1485
Sau3AI	GATC	5 cut(s)	625, 1148, 1261, 1341, 1490
Sau96I	GGNCC	7 cut(s)	253, 265, 346, 361, 566, 1010, 1598
SchI	GAGTC	1 cut(s)	1907
ScrFI	CCNGG	8 cut(s)	308, 364, 573, 1192, 1303, 1304, 1470, 1471
SduI	GDGCHC	3 cut(s)	306, 1838, 1974
SfaNI	GCATC	6 cut(s)	603, 1081, 1213, 1350, 1420, 1624
SfcI	CTRYAG	1 cut(s)	1692
SfoI	GGCGCC	1 cut(s)	148
SfuI	TTCGAA	1 cut(s)	1122
SinI	GGWCC	2 cut(s)	1010, 1598
SmaI	CCCGGG	2 cut(s)	1304, 1471
SmiMI	CAYNNNNRTG	3 cut(s)	1358, 1511, 1766
SmlI	CTYRAG	2 cut(s)	1457, 1640
SmoI	CTYRAG	2 cut(s)	1457, 1640
SseBI	AGGCCT	1 cut(s)	175
SsiI	CCGC	2 cut(s)	286, 356
SspDI	GGCGCC	1 cut(s)	146
SspMI	CTAG	8 cut(s)	516, 863, 953, 998, 1071, 1346, 1488, 1785
StuI	AGGCCT	1 cut(s)	175
StyD4I	CCNGG	8 cut(s)	306, 362, 571, 1190, 1301, 1302, 1468, 1469
TaiI	ACGT	3 cut(s)	246, 640, 853
TaqI	TCGA	8 cut(s)	240, 457, 538, 651, 891, 1122, 1324, 1451
TatI	WGTACW	2 cut(s)	212, 937
TauI	GCSGC	2 cut(s)	289, 358
TfiI	GAWTC	7 cut(s)	454, 855, 895, 907, 1298, 1474, 1777
Tru1I	TTAA	6 cut(s)	111, 200, 1058, 1137, 1379, 1406
Tru9I	TTAA	6 cut(s)	111, 200, 1058, 1137, 1379, 1406
TscAI	CASTG	9 cut(s)	435, 877, 999, 1092, 1360, 1871, 1886, 1972, 1979
TseFI	GTSAC	4 cut(s)	295, 946, 1513, 1906
TseI	GCWGC	6 cut(s)	289, 523, 830, 1394, 1481, 1484
Tsp45I	GTSAC	4 cut(s)	295, 946, 1513, 1906
TspGWI	ACGGA	2 cut(s)	314, 1730
TspMI	CCCGGG	2 cut(s)	1302, 1469
TspRI	CASTG	9 cut(s)	435, 877, 999, 1092, 1360, 1871, 1886, 1972, 1979
Van91I	CCANNNNNTGG	2 cut(s)	865, 1191
VpaK11BI	GGWCC	2 cut(s)	1010, 1598
XagI	CCTNNNNNAGG	1 cut(s)	576
XapI	RAATTY	5 cut(s)	80, 153, 1117, 1174, 1817
XmaI	CCCGGG	2 cut(s)	1302, 1469
XmiI	GTMKAC	2 cut(s)	651, 1605
XmnI	GAANNNNTTC	1 cut(s)	1701
XspI	CTAG	8 cut(s)	516, 863, 953, 998, 1071, 1346, 1488, 1785

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.