Rroxscaffold_1G00048770

AAA domain (dynein-related subfamily)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0009167
Physical Location & Seq
Forward (+)
68883407 .. 68889142
5736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00048770.1

Sequence Viewer

Length: 1779 bp
ATGGTAACTGCACAAGTGTTGACTCGAAAATTGTTGGGGCTTAAACTTGAGTGGAGATTACACTCAAGCCCAGGCCTTGCCAAAGATTCCCGGCAGGAGGAAGACTTCGACGTGGAACTGGGCCGGCTTTTGGCCCTTTTGCCGGAGGAAATGCGGCAGCGAGTGACGGAGCACCCGGAGCTTCATCAGTTGATTGAAGTGGTTATGGATTTGGGCCGGAAGCCGCTGGCCCGGTTTCCCTCCGGCGACTTTGTGTTGTCGGAGAATCTGATTACGGTTCAGGATCTTGAACAGGCTACTTCTCAGGTGGGTGATTTTGCCATTGACAACCGAGCAGGCATTAGCAGAACACTGCACCGGATTAGTGCCATTAGGAATCGAAAGGGTGCCATTATTGGTCTGACTTGTCGTGTTGGTAGGGCAATATCGGGTAGTGCTAGTTTGCTGCGAGATTTGGTTCGAGATGGCCTTTCTTTGTTGCTCATTGGGCCTCCTGGGGTAGGAAAAACAACAATTATCAGGGAAATAGCTAGGATGCTTGCAAATGATCATAAGAAACGTGTGATGATTGTCGACACCTCCAATGAGATTGGTGGGGATGGTGATATACCCCATGCAGGAATAGGCAATGCTCGGCGAATGCAAGTCCCTATCTCTGATATGCAACATAAGGTCTTGATAGAAGCTGTTGAAAATCATATGCCACAAGTGATTGTAATTGATGAAATTGGCACTAAACTTGAAGCAATGGCTGCAAGCACAATTGCACAACGTGGAATCCAGCTAGTGGCCACTGCTCATGGAGTAACCATCGAGAATCTGATAATGAATCCTTCATTGGAAATGCTTGTTGGAGGTGTACAGACTGAGTTAAGAGTTCATCCTAGCTTAGAAACAACAGTGGATGCTATCCTCTCAGGTCGTTTCCCAAATTTCGAAGTTCGCAAAATTAACTCTCAGGGATCAGAAGAAACCACTGTAAGAGAAAATTTGCTTTCCAGTTCCTTGGATGAACAACATGATAATGTTACAGAAGATGCCAAAAATATGAGTGAGAAAGGATATGGTTATAATGATCTCACTCCTGAGGTCTCTCCATATATGCAAGTGGATTCCGGGGATGAAGGGATGGAACTTCGATTGTTTGTTTATGGGATCCTAGAAGCCACAGTGATGCAAGGGATAAAACAGTTGAAGATGGATGAGGCTGCTATCCAGTTAACAGATGATATCAGCAAGGCAGATGCACTATTCGCCATGCAATCCAAGCTCAAGAAAAATCCCGGGATTCAGGCTGCTGCTAGATCTCATGGTACACCCATTTATGTGACTAAGACAAGCGCGTTGGTGGAAATAAAAAAGGCACTTCGGTTATTATTGAATGATTATTATGGTGGTTTGAACGATTATGGGCCAGTAGACAATATGCAATCGTCTGAGAAGGTTGATGCTCTTGAGGAGGCAAGAATAGCCATTGAGCAGGTTGTAATTCCAAAAGGGGAACCTGTAGAACTTCTTCCGAGGCCACCCCACATTATGTCTCTTCAGATTGACCTTATTCGCAAGTACAAATTAGAAGCAGAAAGAATCGGTCAGGAGGCAGATGTGCGTCTCCGTATCCTTCCATTTCATACTACAAGGATGGAAGAGAATCATACTAGCAAAAGAACCGATAATGATGATGGGGATGATGATGAATTTGATGAAGTTCTGGGCACCAATGGTAACACGAATGGTTCACTTCCCACAGTGGAAAGGTTACCACTGCTTCCAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

592

Amino Acids

65.42

Weight (kDa)

5.2

Isoelectric Point (pI)

35.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spore_III_AA PF19568 134 - 284 9e-12 Sporulation stage III, protein AA
AAA PF00004 159 - 245 2.2e-07 ATPase family associated with various cellular activities (AAA)
AAA_18 PF13238 160 - 253 9e-06 AAA domain
PTPase PF25516 379 - 460 4.2e-25 Phosphotyrosine protein phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1071
Acc36I ACCTGC 1 cut(s) 1471
AccB1I GGYRCC 2 cut(s) 386, 1715
AccB7I CCANNNNNTGG 1 cut(s) 787
AccI GTMKAC 2 cut(s) 573, 1419
AccII CGCG 1 cut(s) 1343
AciI CCGC 2 cut(s) 154, 224
AclWI GGATC 4 cut(s) 291, 970, 1150, 1163
AcoI YGGCCR 1 cut(s) 789
AcsI RAATTY 3 cut(s) 931, 988, 1697
AcuI CTGAAG 1 cut(s) 1529
AdeI CACNNNGTG 1 cut(s) 773
AfaI GTAC 3 cut(s) 861, 1315, 1568
AfiI CCNNNNNNNGG 6 cut(s) 97, 130, 142, 500, 617, 787
AflIII ACRYGT 1 cut(s) 559
AgsI TTSAA 7 cut(s) 197, 290, 692, 743, 1195, 1381, 1402
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 2 cut(s) 70, 493
AjuI GAANNNNNNNTTGG 4 cut(s) 821, 834, 853, 866
AluBI AGCT 6 cut(s) 181, 530, 686, 784, 888, 1270
AluI AGCT 6 cut(s) 181, 530, 686, 784, 888, 1270
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 3 cut(s) 1096, 1545, 1616
AlwI GGATC 4 cut(s) 291, 970, 1150, 1163
Ama87I CYCGRG 1 cut(s) 1283
ApeKI GCWGC 6 cut(s) 157, 445, 752, 1208, 1295, 1298
ApoI RAATTY 3 cut(s) 931, 988, 1697
Asp700I GAANNNNTTC 1 cut(s) 1515
AspLEI GCGC 1 cut(s) 1343
AspS9I GGNCC 6 cut(s) 121, 133, 214, 229, 488, 1412
AsuC2I CCSGG 6 cut(s) 91, 176, 232, 1117, 1284, 1285
AsuHPI GGTGA 2 cut(s) 323, 614
AsuII TTCGAA 1 cut(s) 936
AvaI CYCGRG 1 cut(s) 1283
AxyI CCTNAGG 1 cut(s) 1086
BaeGI GKGCMC 1 cut(s) 1718
BalI TGGCCA 1 cut(s) 791
BamHI GGATCC 1 cut(s) 1155
BanI GGYRCC 2 cut(s) 386, 1715
BarI GAAGNNNNNNTAC 2 cut(s) 1500, 1532
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 1 cut(s) 174
BbvI GCAGC 6 cut(s) 169, 432, 739, 1195, 1282, 1285
BccI CCATC 7 cut(s) 458, 593, 818, 1123, 1192, 1636, 1676
BciT130I CCWGG 2 cut(s) 72, 495
BciVI GTATCC 1 cut(s) 1628
BclI TGATCA 1 cut(s) 547
BcnI CCSGG 6 cut(s) 91, 176, 232, 1117, 1284, 1285
BcoDI GTCTC 3 cut(s) 1096, 1545, 1616
BfaI CTAG 7 cut(s) 438, 531, 785, 885, 1160, 1302, 1659
BfmI CTRYAG 1 cut(s) 1506
BfuAI ACCTGC 1 cut(s) 1471
BfuI GTATCC 1 cut(s) 1628
BglII AGATCT 1 cut(s) 1304
BisI GCNGC 8 cut(s) 155, 158, 224, 446, 753, 1209, 1296, 1299
BlsI GCNGC 8 cut(s) 156, 159, 225, 447, 754, 1210, 1297, 1300
Bme1390I CCNGG 8 cut(s) 72, 91, 176, 232, 495, 1117, 1284, 1285
BmeT110I CYCGRG 1 cut(s) 1283
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 6 cut(s) 121, 133, 214, 229, 488, 1412
BmiI GGNNCC 4 cut(s) 388, 1157, 1503, 1717
BmrFI CCNGG 8 cut(s) 72, 91, 176, 232, 495, 1117, 1284, 1285
BmrI ACTGGG 1 cut(s) 128
BmsI GCATC 6 cut(s) 525, 895, 1027, 1164, 1234, 1438
BmuI ACTGGG 1 cut(s) 128
BpiI GAAGAC 1 cut(s) 108
Bpu14I TTCGAA 1 cut(s) 936
BpuEI CTTGAG 4 cut(s) 49, 68, 1256, 1475
BpuMI CCSGG 6 cut(s) 91, 176, 232, 1117, 1284, 1285
BsaI GGTCTC 1 cut(s) 1096
BsaJI CCNNGG 6 cut(s) 70, 494, 1005, 1116, 1283, 1520
BsaWI WCCGGW 1 cut(s) 357
Bsc4I CCNNNNNNNGG 6 cut(s) 97, 130, 142, 500, 617, 787
Bse118I RCCGGY 1 cut(s) 123
Bse1I ACTGG 4 cut(s) 123, 999, 1216, 1415
Bse21I CCTNAGG 1 cut(s) 1086
Bse3DI GCAATG 2 cut(s) 634, 753
BseBI CCWGG 2 cut(s) 72, 495
BseDI CCNNGG 6 cut(s) 70, 494, 1005, 1116, 1283, 1520
BseLI CCNNNNNNNGG 6 cut(s) 97, 130, 142, 500, 617, 787
BseMI GCAATG 2 cut(s) 634, 753
BseMII CTCAG 6 cut(s) 317, 858, 930, 971, 1077, 1428
BseNI ACTGG 4 cut(s) 123, 999, 1216, 1415
BseRI GAGGAG 1 cut(s) 1472
BseSI GKGCMC 1 cut(s) 1718
BseXI GCAGC 6 cut(s) 169, 432, 739, 1195, 1282, 1285
BsgI GTGCAG 1 cut(s) 338
Bsh1236I CGCG 1 cut(s) 1343
BshNI GGYRCC 2 cut(s) 386, 1715
BsiHKAI GWGCWC 1 cut(s) 174
BsiHKCI CYCGRG 1 cut(s) 1283
BslFI GGGAC 1 cut(s) 632
BslI CCNNNNNNNGG 6 cut(s) 97, 130, 142, 500, 617, 787
BsmAI GTCTC 3 cut(s) 1096, 1545, 1616
BsmBI CGTCTC 1 cut(s) 1616
BsmFI GGGAC 1 cut(s) 632
BsmI GAATGC 1 cut(s) 645
Bso31I GGTCTC 1 cut(s) 1096
BsoBI CYCGRG 1 cut(s) 1283
Bsp119I TTCGAA 1 cut(s) 936
Bsp1286I GDGCHC 2 cut(s) 174, 1718
Bsp1407I TGTACA 1 cut(s) 859
Bsp143I GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
BspACI CCGC 2 cut(s) 154, 224
BspCNI CTCAG 6 cut(s) 316, 859, 929, 970, 1078, 1429
BspFNI CGCG 1 cut(s) 1343
BspLI GGNNCC 4 cut(s) 388, 1157, 1503, 1717
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 4 cut(s) 291, 970, 1150, 1163
BspT104I TTCGAA 1 cut(s) 936
BspT107I GGYRCC 2 cut(s) 386, 1715
BspTNI GGTCTC 1 cut(s) 1096
BsrDI GCAATG 2 cut(s) 634, 753
BsrFI RCCGGY 1 cut(s) 123
BsrGI TGTACA 1 cut(s) 859
BsrI ACTGG 4 cut(s) 123, 999, 1216, 1415
BssAI RCCGGY 1 cut(s) 123
BssECI CCNNGG 6 cut(s) 70, 494, 1005, 1116, 1283, 1520
BssMI GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
BssT1I CCWWGG 1 cut(s) 1005
Bst2UI CCWGG 2 cut(s) 72, 495
Bst4CI ACNGT 6 cut(s) 277, 901, 979, 1171, 1191, 1750
Bst6I CTCTTC 2 cut(s) 1548, 1641
BstAPI GCANNNNNTGC 1 cut(s) 752
BstAUI TGTACA 1 cut(s) 859
BstBI TTCGAA 1 cut(s) 936
BstC8I GCNNGC 5 cut(s) 125, 228, 337, 540, 757
BstDEI CTNAG 8 cut(s) 303, 867, 889, 916, 957, 1086, 1332, 1437
BstEII GGTNACC 1 cut(s) 1758
BstENI CCTNNNNNAGG 1 cut(s) 498
BstFNI CGCG 1 cut(s) 1343
BstHHI GCGC 1 cut(s) 1343
BstKTI GATC 6 cut(s) 286, 550, 965, 1078, 1158, 1307
BstMAI GTCTC 3 cut(s) 1096, 1545, 1616
BstMBI GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
BstMWI GCNNNNNNNGC 6 cut(s) 178, 487, 752, 1253, 1267, 1469
BstNI CCWGG 2 cut(s) 72, 495
BstPI GGTNACC 1 cut(s) 1758
BstSCI CCNGG 8 cut(s) 70, 89, 174, 230, 493, 1115, 1282, 1283
BstSFI CTRYAG 1 cut(s) 1506
BstSLI GKGCMC 1 cut(s) 1718
BstUI CGCG 1 cut(s) 1343
BstV1I GCAGC 6 cut(s) 169, 432, 739, 1195, 1282, 1285
BstV2I GAAGAC 1 cut(s) 108
BstX2I RGATCY 3 cut(s) 283, 1155, 1304
BstXI CCANNNNNNTGG 1 cut(s) 1006
BstYI RGATCY 3 cut(s) 283, 1155, 1304
Bsu36I CCTNAGG 1 cut(s) 1086
BsuI GTATCC 1 cut(s) 1628
BtrI CACGTC 1 cut(s) 112
BtsI GCAGTG 3 cut(s) 350, 792, 1763
BtsIMutI CAGTG 7 cut(s) 350, 792, 906, 975, 1176, 1755, 1763
BveI ACCTGC 1 cut(s) 1471
Cac8I GCNNGC 5 cut(s) 125, 228, 337, 540, 757
CfoI GCGC 1 cut(s) 1343
Cfr10I RCCGGY 1 cut(s) 123
Cfr13I GGNCC 6 cut(s) 121, 133, 214, 229, 488, 1412
Cfr9I CCCGGG 1 cut(s) 1283
CseI GACGC 1 cut(s) 1598
Csp6I GTAC 3 cut(s) 860, 1314, 1567
CviAII CATG 5 cut(s) 614, 800, 1019, 1258, 1310
CviQI GTAC 3 cut(s) 860, 1314, 1567
DdeI CTNAG 8 cut(s) 303, 867, 889, 916, 957, 1086, 1332, 1437
DpnI GATC 6 cut(s) 285, 549, 964, 1077, 1157, 1306
DpnII GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
DraIII CACNNNGTG 1 cut(s) 773
EaeI YGGCCR 1 cut(s) 789
Eam1104I CTCTTC 2 cut(s) 1548, 1641
EarI CTCTTC 2 cut(s) 1548, 1641
Eco130I CCWWGG 1 cut(s) 1005
Eco147I AGGCCT 1 cut(s) 75
Eco31I GGTCTC 1 cut(s) 1096
Eco32I GATATC 1 cut(s) 1231
Eco57I CTGAAG 1 cut(s) 1529
Eco81I CCTNAGG 1 cut(s) 1086
Eco88I CYCGRG 1 cut(s) 1283
Eco91I GGTNACC 1 cut(s) 1758
EcoNI CCTNNNNNAGG 1 cut(s) 498
EcoO65I GGTNACC 1 cut(s) 1758
EcoRII CCWGG 2 cut(s) 70, 493
EcoRV GATATC 1 cut(s) 1231
EcoT14I CCWWGG 1 cut(s) 1005
ErhI CCWWGG 1 cut(s) 1005
Esp3I CGTCTC 1 cut(s) 1616
FaeI CATG 5 cut(s) 617, 803, 1022, 1261, 1313
FaqI GGGAC 1 cut(s) 632
FatI CATG 5 cut(s) 613, 799, 1018, 1257, 1309
FauNDI CATATG 1 cut(s) 699
FbaI TGATCA 1 cut(s) 547
FblI GTMKAC 2 cut(s) 573, 1419
Fnu4HI GCNGC 8 cut(s) 155, 158, 224, 446, 753, 1209, 1296, 1299
Fsp4HI GCNGC 8 cut(s) 155, 158, 224, 446, 753, 1209, 1296, 1299
FspBI CTAG 7 cut(s) 438, 531, 785, 885, 1160, 1302, 1659
GlaI GCGC 1 cut(s) 1342
GluI GCNGC 8 cut(s) 155, 158, 224, 446, 753, 1209, 1296, 1299
HgaI GACGC 1 cut(s) 1598
HhaI GCGC 1 cut(s) 1343
Hin1II CATG 5 cut(s) 617, 803, 1022, 1261, 1313
Hin6I GCGC 1 cut(s) 1341
HinP1I GCGC 1 cut(s) 1341
HincII GTYRAC 3 cut(s) 21, 574, 1221
HindII GTYRAC 3 cut(s) 21, 574, 1221
HpaI GTTAAC 1 cut(s) 1221
HphI GGTGA 2 cut(s) 323, 614
Hpy166II GTNNAC 7 cut(s) 21, 574, 860, 1221, 1316, 1420, 1739
Hpy188I TCNGA 9 cut(s) 262, 270, 402, 658, 822, 967, 1438, 1521, 1548
Hpy8I GTNNAC 7 cut(s) 21, 574, 860, 1221, 1316, 1420, 1739
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 4 cut(s) 843, 1118, 1435, 1631
HpyCH4III ACNGT 6 cut(s) 277, 901, 979, 1171, 1191, 1750
HpyCH4IV ACGT 3 cut(s) 111, 559, 772
HpyF10VI GCNNNNNNNGC 6 cut(s) 178, 487, 752, 1253, 1267, 1469
HpyF3I CTNAG 8 cut(s) 303, 867, 889, 916, 957, 1086, 1332, 1437
HpySE526I ACGT 3 cut(s) 111, 559, 772
Hsp92II CATG 5 cut(s) 617, 803, 1022, 1261, 1313
HspAI GCGC 1 cut(s) 1341
KroI GCCGGC 1 cut(s) 123
KroNI GCCGGC 1 cut(s) 125
Ksp22I TGATCA 1 cut(s) 547
KspAI GTTAAC 1 cut(s) 1221
Kzo9I GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
LmnI GCTCC 2 cut(s) 169, 178
Lsp1109I GCAGC 6 cut(s) 169, 432, 739, 1195, 1282, 1285
LweI GCATC 6 cut(s) 525, 895, 1027, 1164, 1234, 1438
MaeI CTAG 7 cut(s) 438, 531, 785, 885, 1160, 1302, 1659
MaeII ACGT 3 cut(s) 111, 559, 772
MaeIII GTNAC 7 cut(s) 4, 163, 805, 1027, 1327, 1724, 1758
MalI GATC 6 cut(s) 285, 549, 964, 1077, 1157, 1306
MboI GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
MboII GAAGA 7 cut(s) 113, 980, 1046, 1207, 1508, 1535, 1658
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 3 cut(s) 283, 1155, 1304
MhlI GDGCHC 2 cut(s) 174, 1718
MlsI TGGCCA 1 cut(s) 791
MluNI TGGCCA 1 cut(s) 791
MlyI GAGTC 1 cut(s) 16
MmeI TCCRAC 2 cut(s) 240, 832
Mox20I TGGCCA 1 cut(s) 791
MroNI GCCGGC 1 cut(s) 123
MroXI GAANNNNTTC 1 cut(s) 1515
MscI TGGCCA 1 cut(s) 791
MseI TTAA 4 cut(s) 42, 872, 951, 1220
MslI CAYNNNNRTG 3 cut(s) 1023, 1172, 1325
Msp20I TGGCCA 1 cut(s) 791
MspA1I CMGCKG 1 cut(s) 226
MspR9I CCNGG 8 cut(s) 72, 91, 176, 232, 495, 1117, 1284, 1285
MunI CAATTG 1 cut(s) 762
Mva1269I GAATGC 1 cut(s) 645
MvaI CCWGG 2 cut(s) 72, 495
MvnI CGCG 1 cut(s) 1343
MwoI GCNNNNNNNGC 6 cut(s) 178, 487, 752, 1253, 1267, 1469
NaeI GCCGGC 1 cut(s) 125
NciI CCSGG 6 cut(s) 91, 176, 232, 1117, 1284, 1285
NdeI CATATG 1 cut(s) 699
NdeII GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
NgoMIV GCCGGC 1 cut(s) 123
NlaIII CATG 5 cut(s) 617, 803, 1022, 1261, 1313
NlaIV GGNNCC 4 cut(s) 388, 1157, 1503, 1717
NmeAIII GCCGAG 1 cut(s) 613
NmuCI GTSAC 2 cut(s) 163, 1327
NspV TTCGAA 1 cut(s) 936
PceI AGGCCT 1 cut(s) 75
PctI GAATGC 1 cut(s) 645
PdiI GCCGGC 1 cut(s) 125
PdmI GAANNNNTTC 1 cut(s) 1515
PflMI CCANNNNNTGG 1 cut(s) 787
PkrI GCNGC 8 cut(s) 156, 159, 225, 447, 754, 1210, 1297, 1300
PleI GAGTC 1 cut(s) 16
PpsI GAGTC 1 cut(s) 16
PsiI TTATAA 1 cut(s) 1071
Psp6I CCWGG 2 cut(s) 70, 493
PspEI GGTNACC 1 cut(s) 1758
PspGI CCWGG 2 cut(s) 70, 493
PspN4I GGNNCC 4 cut(s) 388, 1157, 1503, 1717
PspPI GGNCC 6 cut(s) 121, 133, 214, 229, 488, 1412
PsuI RGATCY 3 cut(s) 283, 1155, 1304
RsaI GTAC 3 cut(s) 861, 1315, 1568
RsaNI GTAC 3 cut(s) 860, 1314, 1567
RseI CAYNNNNRTG 3 cut(s) 1023, 1172, 1325
SalI GTCGAC 1 cut(s) 572
SaqAI TTAA 4 cut(s) 42, 872, 951, 1220
SatI GCNGC 8 cut(s) 155, 158, 224, 446, 753, 1209, 1296, 1299
Sau3AI GATC 6 cut(s) 283, 547, 962, 1075, 1155, 1304
Sau96I GGNCC 6 cut(s) 121, 133, 214, 229, 488, 1412
SchI GAGTC 1 cut(s) 16
ScrFI CCNGG 8 cut(s) 72, 91, 176, 232, 495, 1117, 1284, 1285
SduI GDGCHC 2 cut(s) 174, 1718
SfaNI GCATC 6 cut(s) 525, 895, 1027, 1164, 1234, 1438
SfcI CTRYAG 1 cut(s) 1506
SfuI TTCGAA 1 cut(s) 936
SmaI CCCGGG 1 cut(s) 1285
SmiMI CAYNNNNRTG 3 cut(s) 1023, 1172, 1325
SmlI CTYRAG 4 cut(s) 47, 64, 1271, 1454
SmoI CTYRAG 4 cut(s) 47, 64, 1271, 1454
SseBI AGGCCT 1 cut(s) 75
SsiI CCGC 2 cut(s) 154, 224
SspMI CTAG 7 cut(s) 438, 531, 785, 885, 1160, 1302, 1659
StuI AGGCCT 1 cut(s) 75
StyD4I CCNGG 8 cut(s) 70, 89, 174, 230, 493, 1115, 1282, 1283
StyI CCWWGG 1 cut(s) 1005
TaaI ACNGT 6 cut(s) 277, 901, 979, 1171, 1191, 1750
TaiI ACGT 3 cut(s) 114, 562, 775
TaqI TCGA 8 cut(s) 25, 108, 379, 460, 573, 813, 936, 1138
TaqII GACCGA 1 cut(s) 1580
TatI WGTACW 2 cut(s) 859, 1566
TauI GCSGC 2 cut(s) 157, 226
Tru1I TTAA 4 cut(s) 42, 872, 951, 1220
Tru9I TTAA 4 cut(s) 42, 872, 951, 1220
TscAI CASTG 7 cut(s) 357, 799, 906, 982, 1176, 1755, 1770
TseFI GTSAC 2 cut(s) 163, 1327
TseI GCWGC 6 cut(s) 157, 445, 752, 1208, 1295, 1298
Tsp45I GTSAC 2 cut(s) 163, 1327
TspGWI ACGGA 2 cut(s) 182, 1604
TspMI CCCGGG 1 cut(s) 1283
TspRI CASTG 7 cut(s) 357, 799, 906, 982, 1176, 1755, 1770
Van91I CCANNNNNTGG 1 cut(s) 787
XagI CCTNNNNNAGG 1 cut(s) 498
XapI RAATTY 3 cut(s) 931, 988, 1697
XmaI CCCGGG 1 cut(s) 1283
XmiI GTMKAC 2 cut(s) 573, 1419
XmnI GAANNNNTTC 1 cut(s) 1515
XspI CTAG 7 cut(s) 438, 531, 785, 885, 1160, 1302, 1659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.