RLG00000034708

Phosphoesterase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
52441318 .. 52445711
4394 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034708

Sequence Viewer

Length: 1269 bp
ATGGGTGTCCGTGGCAGCTCCATTTTCATCACATTTCTGCTTCTTCTTCTTGGCTTCCATGGGGGCGGCAGCAGCAGCCCCATCAAGACCATCGTGGTGCTGGTGATGGAGAACAGGTCGTTCGACCACATGATCGGGTGGATGAAGAGACTCAACCCTGAAATAAACGGCGTGGATGGCTCCGAGTCCAACCCTCTCAACACCAGTGACCCAAACTCGAAGCGCATCTTCTTCAAAAACGAGTCTCACTACGTCGACCCGGACCCGGGTCACTCGTTCCAAGCCATTAGAGAGCAGATATTCGGGTCCGACGCCGGCAACACCTCGTCGGGAAACCCACCTCCGATGAACGGGTTTGCTCAGCAGGCTTACTCCATGGACAACACCACCACCATGTCCCAGGATGTCATGAATGGCTTCGATCCCGACATCGTCGCCGTCTACAAAGCTCTTGTTTCTGAATTCGCAGTTGTTGACAGGTGGTTTGCCTCGGTGCCATCCTCAACACAGCCGAATCGCCTCTTTGTTCATTCGGGGACATCTGCTGGTGCAACAAGCAACATTGCGTCACTTCTGGCCAAGGGTTACCCACAAAGAACCATCTTCGAGAACCTTGACGATGAAGGAATATCCTTTGGAATATACTACCAAAACATTCCGACCACATTGTTCTACCGTAATTTGAGGAAGCTCAAGTACTTGGGCAACTTCCACCTATATGACGCCTTCAAGGCCCATGCAAAGCAAGGGAAGCTGCCATCCTACACTGTTGTGGAGCAGAGATACTTTGATCTCAAGTTCGCACCCGCAAATGATGACCATCCATCGCATGATGTGTACCACGGCCAAATGTTCGTCAAGGAGGTCTACGAGATACTGAGGGCGAGTCCGCAATGGAACCAGACCTTGTTGGTCATCACGTATGATGAACATGGTGGGTTCTACGATCATGTGCCTACTCCCGTTGATGGGGTTCCCAGCCCGGATGGGATTGTAGGGCCGGAGCCTTTCTTGTTTCAGTTCAATCGGTTGGGAGTTAGGGTTCCGACCATCTTGGTGTCGCCCTGGATAGAAAAGGGTACCGTTGTTCATGGGCCTAATGGATCACCATTTCCGAATTCGGAATTTGAACACTCGTCAATTCCAGCAACTGTTAAGAAGGTGTTCAACCTGTCTGCCCCATTCCTAACAAAGAGGGATGAATGGGCTGGTACCTTTGAAGGCATTGTGCAAACAAGGACAGAACCCAGAACTGATTGTCCAGGTTAG

Protein Analysis

423

Amino Acids

46.91

Weight (kDa)

5.86

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphoesterase PF04185 28 - 391 7e-109 Phosphoesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011842)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1079, 1211
AccB1I GGYRCC 3 cut(s) 493, 1079, 1211
AccI GTMKAC 3 cut(s) 255, 441, 867
AciI CCGC 3 cut(s) 66, 807, 890
AclWI GGATC 2 cut(s) 416, 1111
AcoI YGGCCR 2 cut(s) 576, 844
AcsI RAATTY 3 cut(s) 461, 1117, 1124
AcyI GRCGYC 2 cut(s) 312, 723
AfaI GTAC 4 cut(s) 698, 839, 1081, 1213
AfiI CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
AgsI TTSAA 6 cut(s) 235, 730, 1024, 1130, 1168, 1220
AjnI CCWGG 3 cut(s) 399, 1064, 1261
AleI CACNNNNGTG 1 cut(s) 770
AloI GAACNNNNNNTCC 3 cut(s) 1026, 1058, 1243
AluBI AGCT 4 cut(s) 18, 449, 691, 754
AluI AGCT 4 cut(s) 18, 449, 691, 754
Alw26I GTCTC 2 cut(s) 142, 249
AlwI GGATC 2 cut(s) 416, 1111
AlwNI CAGNNNCTG 1 cut(s) 1151
Ama87I CYCGRG 1 cut(s) 265
AoxI GGCC 5 cut(s) 576, 732, 844, 998, 1094
ApeKI GCWGC 5 cut(s) 15, 69, 72, 75, 754
ApoI RAATTY 3 cut(s) 461, 1117, 1124
ArsI GACNNNNNNTTYG 2 cut(s) 467, 499
Asp700I GAANNNNTTC 2 cut(s) 416, 1163
Asp718I GGTACC 2 cut(s) 1079, 1211
AspLEI GCGC 1 cut(s) 225
AspS9I GGNCC 5 cut(s) 262, 306, 733, 998, 1094
AsuC2I CCSGG 4 cut(s) 260, 266, 267, 983
AsuHPI GGTGA 2 cut(s) 115, 1098
AvaI CYCGRG 1 cut(s) 265
AvaII GGWCC 2 cut(s) 262, 306
BaeI ACNNNNGTAYC 2 cut(s) 1071, 1104
BalI TGGCCA 1 cut(s) 578
BanI GGYRCC 3 cut(s) 493, 1079, 1211
BarI GAAGNNNNNNTAC 2 cut(s) 680, 712
BbvI GCAGC 5 cut(s) 27, 81, 84, 87, 741
BceAI ACGGC 3 cut(s) 184, 422, 859
BciT130I CCWGG 3 cut(s) 401, 1066, 1263
BcnI CCSGG 4 cut(s) 260, 266, 267, 983
BcoDI GTCTC 2 cut(s) 142, 249
BglI GCCNNNNNGGC 1 cut(s) 731
BisI GCNGC 6 cut(s) 16, 67, 70, 73, 76, 755
BlpI GCTNAGC 1 cut(s) 360
BlsI GCNGC 6 cut(s) 17, 68, 71, 74, 77, 756
BmcAI AGTACT 1 cut(s) 698
Bme1390I CCNGG 7 cut(s) 260, 266, 267, 401, 983, 1066, 1263
Bme18I GGWCC 2 cut(s) 262, 306
BmeT110I CYCGRG 1 cut(s) 265
BmgT120I GGNCC 5 cut(s) 262, 306, 733, 998, 1094
BmrFI CCNGG 7 cut(s) 260, 266, 267, 401, 983, 1066, 1263
BmsI GCATC 1 cut(s) 234
BoxI GACNNNNGTC 1 cut(s) 267
Bpu1102I GCTNAGC 1 cut(s) 360
BpuEI CTTGAG 2 cut(s) 677, 779
BpuMI CCSGG 4 cut(s) 260, 266, 267, 983
BsaAI YACGTR 1 cut(s) 921
BsaBI GATNNNNATC 1 cut(s) 819
BsaHI GRCGYC 2 cut(s) 312, 723
BsaJI CCNNGG 9 cut(s) 10, 58, 265, 375, 399, 489, 579, 841, 1064
BsaXI ACNNNNNCTCC 4 cut(s) 101, 131, 1026, 1056
Bsc4I CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 1 cut(s) 204
Bse3DI GCAATG 2 cut(s) 561, 899
Bse8I GATNNNNATC 1 cut(s) 819
BseBI CCWGG 3 cut(s) 401, 1066, 1263
BseDI CCNNGG 9 cut(s) 10, 58, 265, 375, 399, 489, 579, 841, 1064
BseGI GGATG 8 cut(s) 147, 181, 409, 497, 758, 820, 991, 1204
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
BseMI GCAATG 2 cut(s) 561, 899
BseMII CTCAG 2 cut(s) 374, 869
BseNI ACTGG 1 cut(s) 204
BseXI GCAGC 5 cut(s) 27, 81, 84, 87, 741
BseYI CCCAGC 1 cut(s) 977
BshFI GGCC 5 cut(s) 578, 734, 846, 1000, 1096
BshNI GGYRCC 3 cut(s) 493, 1079, 1211
BsiHKCI CYCGRG 1 cut(s) 265
BsiSI CCGG 5 cut(s) 260, 266, 315, 983, 1001
BslFI GGGAC 2 cut(s) 382, 550
BslI CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
BsmAI GTCTC 2 cut(s) 142, 249
BsmFI GGGAC 2 cut(s) 382, 550
BsnI GGCC 5 cut(s) 578, 734, 846, 1000, 1096
BsoBI CYCGRG 1 cut(s) 265
Bsp143I GATC 5 cut(s) 132, 421, 790, 946, 1103
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 2 cut(s) 58, 375
BspACI CCGC 3 cut(s) 66, 807, 890
BspANI GGCC 5 cut(s) 578, 734, 846, 1000, 1096
BspCNI CTCAG 2 cut(s) 373, 870
BspHI TCATGA 1 cut(s) 408
BspPI GGATC 2 cut(s) 416, 1111
BspT107I GGYRCC 3 cut(s) 493, 1079, 1211
BsrDI GCAATG 2 cut(s) 561, 899
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 1 cut(s) 204
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 9 cut(s) 10, 58, 265, 375, 399, 489, 579, 841, 1064
BssMI GATC 5 cut(s) 132, 421, 790, 946, 1103
BssNI GRCGYC 2 cut(s) 312, 723
BssT1I CCWWGG 3 cut(s) 58, 375, 579
Bst2UI CCWGG 3 cut(s) 401, 1066, 1263
Bst4CI ACNGT 4 cut(s) 677, 769, 1084, 1153
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 2 cut(s) 312, 723
BstBAI YACGTR 1 cut(s) 921
BstC8I GCNNGC 2 cut(s) 316, 366
BstDEI CTNAG 2 cut(s) 360, 878
BstDSI CCRYGG 4 cut(s) 10, 58, 375, 841
BstEII GGTNACC 1 cut(s) 584
BstF5I GGATG 8 cut(s) 147, 181, 409, 497, 758, 820, 991, 1204
BstHHI GCGC 1 cut(s) 225
BstKTI GATC 5 cut(s) 135, 424, 793, 949, 1106
BstMAI GTCTC 2 cut(s) 142, 249
BstMBI GATC 5 cut(s) 132, 421, 790, 946, 1103
BstMWI GCNNNNNNNGC 6 cut(s) 72, 75, 177, 365, 731, 751
BstNI CCWGG 3 cut(s) 401, 1066, 1263
BstPAI GACNNNNGTC 1 cut(s) 267
BstPI GGTNACC 1 cut(s) 584
BstSCI CCNGG 7 cut(s) 258, 264, 265, 399, 981, 1064, 1261
BstV1I GCAGC 5 cut(s) 27, 81, 84, 87, 741
BsuRI GGCC 5 cut(s) 578, 734, 846, 1000, 1096
BtgI CCRYGG 4 cut(s) 10, 58, 375, 841
BtgZI GCGATG 1 cut(s) 810
BtsCI GGATG 8 cut(s) 147, 181, 409, 497, 758, 820, 991, 1204
BtsIMutI CAGTG 2 cut(s) 211, 765
Cac8I GCNNGC 2 cut(s) 316, 366
CaiI CAGNNNCTG 1 cut(s) 1151
CciI TCATGA 1 cut(s) 408
CfoI GCGC 1 cut(s) 225
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 5 cut(s) 262, 306, 733, 998, 1094
Cfr9I CCCGGG 1 cut(s) 265
CseI GACGC 3 cut(s) 320, 555, 731
Csp6I GTAC 4 cut(s) 697, 838, 1080, 1212
CviQI GTAC 4 cut(s) 697, 838, 1080, 1212
DdeI CTNAG 2 cut(s) 360, 878
DpnI GATC 5 cut(s) 134, 423, 792, 948, 1105
DpnII GATC 5 cut(s) 132, 421, 790, 946, 1103
EaeI YGGCCR 2 cut(s) 576, 844
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Eco130I CCWWGG 3 cut(s) 58, 375, 579
Eco47I GGWCC 2 cut(s) 262, 306
Eco88I CYCGRG 1 cut(s) 265
Eco91I GGTNACC 1 cut(s) 584
EcoO65I GGTNACC 1 cut(s) 584
EcoRI GAATTC 2 cut(s) 461, 1117
EcoRII CCWGG 3 cut(s) 399, 1064, 1261
EcoT14I CCWWGG 3 cut(s) 58, 375, 579
ErhI CCWWGG 3 cut(s) 58, 375, 579
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 2 cut(s) 382, 550
FauI CCCGC 1 cut(s) 814
FblI GTMKAC 3 cut(s) 255, 441, 867
Fnu4HI GCNGC 6 cut(s) 16, 67, 70, 73, 76, 755
FokI GGATG 8 cut(s) 154, 188, 416, 484, 745, 807, 998, 1211
Fsp4HI GCNGC 6 cut(s) 16, 67, 70, 73, 76, 755
GlaI GCGC 1 cut(s) 224
GluI GCNGC 6 cut(s) 16, 67, 70, 73, 76, 755
GsaI CCCAGC 1 cut(s) 981
HaeIII GGCC 5 cut(s) 578, 734, 846, 1000, 1096
HapII CCGG 5 cut(s) 260, 266, 315, 983, 1001
HgaI GACGC 3 cut(s) 320, 555, 731
HhaI GCGC 1 cut(s) 225
Hin1I GRCGYC 2 cut(s) 312, 723
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HincII GTYRAC 2 cut(s) 256, 475
HindII GTYRAC 2 cut(s) 256, 475
HinfI GANTC 5 cut(s) 150, 185, 242, 514, 886
HpaII CCGG 5 cut(s) 260, 266, 315, 983, 1001
HphI GGTGA 2 cut(s) 115, 1098
Hpy166II GTNNAC 5 cut(s) 256, 442, 475, 838, 868
Hpy188I TCNGA 8 cut(s) 184, 310, 345, 460, 660, 1047, 1116, 1123
Hpy188III TCNNGA 5 cut(s) 85, 330, 409, 425, 607
Hpy8I GTNNAC 5 cut(s) 256, 442, 475, 838, 868
Hpy99I CGWCG 4 cut(s) 257, 314, 331, 437
HpyAV CCTTC 4 cut(s) 617, 736, 1153, 1214
HpyCH4III ACNGT 4 cut(s) 677, 769, 1084, 1153
HpyCH4IV ACGT 2 cut(s) 252, 920
HpyCH4V TGCA 3 cut(s) 551, 740, 1231
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 75, 177, 365, 731, 751
HpyF3I CTNAG 2 cut(s) 360, 878
HpySE526I ACGT 2 cut(s) 252, 920
Hsp92I GRCGYC 2 cut(s) 312, 723
HspAI GCGC 1 cut(s) 223
KpnI GGTACC 2 cut(s) 1083, 1215
KroI GCCGGC 1 cut(s) 314
KroNI GCCGGC 1 cut(s) 316
Kzo9I GATC 5 cut(s) 132, 421, 790, 946, 1103
LmnI GCTCC 4 cut(s) 23, 185, 775, 1003
Lsp1109I GCAGC 5 cut(s) 27, 81, 84, 87, 741
LweI GCATC 1 cut(s) 234
MaeII ACGT 2 cut(s) 252, 920
MaeIII GTNAC 4 cut(s) 206, 269, 567, 584
MalI GATC 5 cut(s) 134, 423, 792, 948, 1105
MboI GATC 5 cut(s) 132, 421, 790, 946, 1103
MboII GAAGA 6 cut(s) 35, 38, 157, 220, 223, 595
MlsI TGGCCA 1 cut(s) 578
MluCI AATT 5 cut(s) 461, 679, 1117, 1124, 1140
MluNI TGGCCA 1 cut(s) 578
MlyI GAGTC 4 cut(s) 144, 194, 251, 895
MmeI TCCRAC 4 cut(s) 213, 333, 683, 1070
Mox20I TGGCCA 1 cut(s) 578
MroNI GCCGGC 1 cut(s) 314
MroXI GAANNNNTTC 2 cut(s) 416, 1163
MscI TGGCCA 1 cut(s) 578
MseI TTAA 1 cut(s) 1155
MslI CAYNNNNRTG 5 cut(s) 95, 392, 717, 770, 1055
Msp20I TGGCCA 1 cut(s) 578
MspI CCGG 5 cut(s) 260, 266, 315, 983, 1001
MspR9I CCNGG 7 cut(s) 260, 266, 267, 401, 983, 1066, 1263
MvaI CCWGG 3 cut(s) 401, 1066, 1263
MwoI GCNNNNNNNGC 6 cut(s) 72, 75, 177, 365, 731, 751
NaeI GCCGGC 1 cut(s) 316
NciI CCSGG 4 cut(s) 260, 266, 267, 983
NcoI CCATGG 2 cut(s) 58, 375
NdeII GATC 5 cut(s) 132, 421, 790, 946, 1103
NgoMIV GCCGGC 1 cut(s) 314
NmuCI GTSAC 3 cut(s) 206, 269, 567
OliI CACNNNNGTG 1 cut(s) 770
PagI TCATGA 1 cut(s) 408
PdiI GCCGGC 1 cut(s) 316
PdmI GAANNNNTTC 2 cut(s) 416, 1163
PfeI GAWTC 1 cut(s) 514
PflFI GACNNNGTC 1 cut(s) 431
PkrI GCNGC 6 cut(s) 17, 68, 71, 74, 77, 756
PleI GAGTC 4 cut(s) 144, 193, 250, 894
PpsI GAGTC 4 cut(s) 144, 193, 250, 894
Ppu21I YACGTR 1 cut(s) 921
PshAI GACNNNNGTC 1 cut(s) 267
Psp6I CCWGG 3 cut(s) 399, 1064, 1261
PspEI GGTNACC 1 cut(s) 584
PspFI CCCAGC 1 cut(s) 977
PspGI CCWGG 3 cut(s) 399, 1064, 1261
PspPI GGNCC 5 cut(s) 262, 306, 733, 998, 1094
PstNI CAGNNNCTG 1 cut(s) 1151
PsyI GACNNNGTC 1 cut(s) 431
RsaI GTAC 4 cut(s) 698, 839, 1081, 1213
RsaNI GTAC 4 cut(s) 697, 838, 1080, 1212
RseI CAYNNNNRTG 5 cut(s) 95, 392, 717, 770, 1055
SalI GTCGAC 1 cut(s) 254
SaqAI TTAA 1 cut(s) 1155
SatI GCNGC 6 cut(s) 16, 67, 70, 73, 76, 755
Sau3AI GATC 5 cut(s) 132, 421, 790, 946, 1103
Sau96I GGNCC 5 cut(s) 262, 306, 733, 998, 1094
ScaI AGTACT 1 cut(s) 698
SchI GAGTC 4 cut(s) 144, 194, 251, 895
ScrFI CCNGG 7 cut(s) 260, 266, 267, 401, 983, 1066, 1263
SfaNI GCATC 1 cut(s) 234
SinI GGWCC 2 cut(s) 262, 306
SmaI CCCGGG 1 cut(s) 267
SmiMI CAYNNNNRTG 5 cut(s) 95, 392, 717, 770, 1055
SmlI CTYRAG 2 cut(s) 692, 794
SmoI CTYRAG 2 cut(s) 692, 794
Sse9I AATT 5 cut(s) 461, 679, 1117, 1124, 1140
SsiI CCGC 3 cut(s) 66, 807, 890
StyD4I CCNGG 7 cut(s) 258, 264, 265, 399, 981, 1064, 1261
StyI CCWWGG 3 cut(s) 58, 375, 579
TaaI ACNGT 4 cut(s) 677, 769, 1084, 1153
TaiI ACGT 2 cut(s) 255, 923
TaqI TCGA 5 cut(s) 123, 218, 255, 420, 606
TasI AATT 5 cut(s) 461, 679, 1117, 1124, 1140
TatI WGTACW 1 cut(s) 696
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 1 cut(s) 514
Tru1I TTAA 1 cut(s) 1155
Tru9I TTAA 1 cut(s) 1155
TscAI CASTG 2 cut(s) 211, 772
TseFI GTSAC 3 cut(s) 206, 269, 567
TseI GCWGC 5 cut(s) 15, 69, 72, 75, 754
Tsp45I GTSAC 3 cut(s) 206, 269, 567
TspDTI ATGAA 9 cut(s) 16, 158, 362, 425, 518, 636, 942, 1079, 1215
TspMI CCCGGG 1 cut(s) 265
TspRI CASTG 2 cut(s) 211, 772
Tth111I GACNNNGTC 1 cut(s) 431
VpaK11BI GGWCC 2 cut(s) 262, 306
XapI RAATTY 3 cut(s) 461, 1117, 1124
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XmaI CCCGGG 1 cut(s) 265
XmiI GTMKAC 3 cut(s) 255, 441, 867
XmnI GAANNNNTTC 2 cut(s) 416, 1163
ZrmI AGTACT 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.