RLG00000034709

Phosphoesterase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
52441622 .. 52445110
3489 bp
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UTR
Exon/CDS
Intron
RLM00000034709

Sequence Viewer

Length: 1575 bp
ATGGGTGTCCGTGGCAGCTCCATTTTCATCACATTTCTGCTTCTTCTTCTTGGCTTCCATGGGGGCGGCAGCAGCAGCCCCATCAAGACCATCGTGGTGCTGGTGATGGAGAACAGGTCGTTCGACCACATGATCGGGTGGATGAAGAGACTCAACCCTGAAATAAACGGCGTGGATGGCTCCGAGTCCAACCCTCTCAACACCAGTGACCCAAACTCGAAGCGCATCTTCTTCAAAAACGAGTCTCACTACGTCGACCCGGACCCGGGTCACTCGTTCCAAGCCATTAGAGAGCAGATATTCGGGTCCGACGCCGGCAACACCTCGTCGGGAAACCCACCTCCGATGAACGGGTTTGCTCAGCAGGCTTACTCCATGGACAACACCACCACCATGTCCCAGGATGTCATGAATGGCTTCGATCCCGACATCGTCGCCGTCTACAAAGCTCTTGTTTCTGAATTCGCAGTTGTTGACAGGTGGTTTGCCTCGGTGCCATCCTCAACACAGCCGAATCGCCTCTTTGTTCATTCGGGGACATCTGCTGGTGCAACAAGCAACATTGCGTCACTTCTGGCCAAGGGTTACCCACAAAGAACCATCTTCGAGAACCTTGACGATGAAGGAATATCCTTTGGAATATACTACCAAAACATTCCGACCACATTGTTCTACCGTAATTTGAGGAAGCTCAAGTACTTGGGCAACTTCCACCTATATGACGCCTTCAAGGCCCATGCAAAGCAAGGGAAGCTGCCATCCTACACTGTTGTGGAGCAGAGATACTTTGATCTCAAGTTCGCACCCGCAAATGATGACCATCCATCGCATGATGTGTACCACGGCCAAATGTTCGTCAAGGAGGTCTACGAGATACTGAGGGCGAGTCCGCAATGGAACCAGACCTTGTTGGTCATCACGTATGATGAACATGGTGGGTTCTACGATCATGTGCCTACTCCCGTTGATGGGGTTCCCAGCCCGGATGGGATTGTAGGGCCGGAGCCTTTCTTGTTTCAGTTCAATCGGTTGGGAGTTAGGGTTCCGACCATCTTGGTGTCGCCCTGGATAGAAAAGGGTACCGTTGTTCATGGGCCTAATGGATCACCATTTCCGAATTCGGAATTTGAACACTCGTCAATTCCAGCAACTGTTAAGAAGGTGTTCAACCTGTCTGCCCCATTCCTAACAAAGAGGGATGAATGGGCTGGTACCTTTGAAGGCATTGTGCAAACAAGGACAGAACCCAGAACTGATTGTCCAGAGCAACTACCTGAACCAGTCCCAACCAGAAACAGCACGGCAAAGGAAGACGCCAAGCTTAGTGAATTTCAGCAGGAGGTACTGCAACTTGCAGCCGTGCTAAAAGGAGATAACCTATTTACAAGTTACCCAGAAAAGACGGGGGAGAAGATGACTGTCAAGGAAGGGAAGGAATACACTGAAGATGCACTTAAACGATTCTTCGAGGCAGGGCTTTATGCTAAGAGAATGGGAGTTAATGAAGAACAAATTGTCCAGATGAGGCCCTCCCTTACAACAAGATCATCCAAAACTTCACCAGAACACCCATAG

Protein Analysis

525

Amino Acids

58.5

Weight (kDa)

5.79

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphoesterase PF04185 28 - 391 1.4e-108 Phosphoesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011842)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1079, 1211
AccB1I GGYRCC 3 cut(s) 493, 1079, 1211
AccI GTMKAC 3 cut(s) 255, 441, 867
AciI CCGC 3 cut(s) 66, 807, 890
AclWI GGATC 2 cut(s) 416, 1111
AcoI YGGCCR 2 cut(s) 576, 844
AcsI RAATTY 4 cut(s) 461, 1117, 1124, 1328
AcuI CTGAAG 1 cut(s) 1464
AcyI GRCGYC 3 cut(s) 312, 723, 1314
AfaI GTAC 5 cut(s) 698, 839, 1081, 1213, 1344
AfiI CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
AgsI TTSAA 6 cut(s) 235, 730, 1024, 1130, 1168, 1220
AjnI CCWGG 2 cut(s) 399, 1064
AleI CACNNNNGTG 1 cut(s) 770
AloI GAACNNNNNNTCC 6 cut(s) 1026, 1058, 1243, 1275, 1500, 1532
AluBI AGCT 5 cut(s) 18, 449, 691, 754, 1321
AluI AGCT 5 cut(s) 18, 449, 691, 754, 1321
Alw26I GTCTC 2 cut(s) 142, 249
AlwI GGATC 2 cut(s) 416, 1111
AlwNI CAGNNNCTG 1 cut(s) 1151
Ama87I CYCGRG 1 cut(s) 265
AoxI GGCC 6 cut(s) 576, 732, 844, 998, 1094, 1526
ApeKI GCWGC 6 cut(s) 15, 69, 72, 75, 754, 1355
ApoI RAATTY 4 cut(s) 461, 1117, 1124, 1328
ArsI GACNNNNNNTTYG 2 cut(s) 467, 499
Asp700I GAANNNNTTC 2 cut(s) 416, 1163
Asp718I GGTACC 2 cut(s) 1079, 1211
AspLEI GCGC 1 cut(s) 225
AspS9I GGNCC 6 cut(s) 262, 306, 733, 998, 1094, 1527
AsuC2I CCSGG 4 cut(s) 260, 266, 267, 983
AsuHPI GGTGA 3 cut(s) 115, 1098, 1551
AvaI CYCGRG 1 cut(s) 265
AvaII GGWCC 2 cut(s) 262, 306
BaeI ACNNNNGTAYC 2 cut(s) 1071, 1104
BalI TGGCCA 1 cut(s) 578
BanI GGYRCC 3 cut(s) 493, 1079, 1211
BarI GAAGNNNNNNTAC 2 cut(s) 680, 712
BbsI GAAGAC 1 cut(s) 1317
BbvI GCAGC 6 cut(s) 27, 81, 84, 87, 741, 1367
BceAI ACGGC 5 cut(s) 184, 422, 859, 1317, 1343
BciT130I CCWGG 2 cut(s) 401, 1066
BcnI CCSGG 4 cut(s) 260, 266, 267, 983
BcoDI GTCTC 2 cut(s) 142, 249
BglI GCCNNNNNGGC 1 cut(s) 731
BisI GCNGC 7 cut(s) 16, 67, 70, 73, 76, 755, 1356
BlpI GCTNAGC 1 cut(s) 360
BlsI GCNGC 7 cut(s) 17, 68, 71, 74, 77, 756, 1357
BmcAI AGTACT 1 cut(s) 698
Bme1390I CCNGG 6 cut(s) 260, 266, 267, 401, 983, 1066
Bme18I GGWCC 2 cut(s) 262, 306
BmeT110I CYCGRG 1 cut(s) 265
BmgT120I GGNCC 6 cut(s) 262, 306, 733, 998, 1094, 1527
BmrFI CCNGG 6 cut(s) 260, 266, 267, 401, 983, 1066
BmsI GCATC 2 cut(s) 234, 1438
BoxI GACNNNNGTC 1 cut(s) 267
BpiI GAAGAC 1 cut(s) 1317
Bpu1102I GCTNAGC 1 cut(s) 360
BpuEI CTTGAG 2 cut(s) 677, 779
BpuMI CCSGG 4 cut(s) 260, 266, 267, 983
BsaAI YACGTR 1 cut(s) 921
BsaBI GATNNNNATC 1 cut(s) 819
BsaHI GRCGYC 3 cut(s) 312, 723, 1314
BsaJI CCNNGG 9 cut(s) 10, 58, 265, 375, 399, 489, 579, 841, 1064
BsaXI ACNNNNNCTCC 4 cut(s) 101, 131, 1026, 1056
Bsc4I CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 2 cut(s) 204, 1280
Bse3DI GCAATG 2 cut(s) 561, 899
Bse8I GATNNNNATC 1 cut(s) 819
BseBI CCWGG 2 cut(s) 401, 1066
BseDI CCNNGG 9 cut(s) 10, 58, 265, 375, 399, 489, 579, 841, 1064
BseGI GGATG 9 cut(s) 147, 181, 409, 497, 758, 820, 991, 1204, 1547
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
BseMI GCAATG 2 cut(s) 561, 899
BseMII CTCAG 2 cut(s) 374, 869
BseNI ACTGG 2 cut(s) 204, 1280
BseXI GCAGC 6 cut(s) 27, 81, 84, 87, 741, 1367
BseYI CCCAGC 1 cut(s) 977
BshFI GGCC 6 cut(s) 578, 734, 846, 1000, 1096, 1528
BshNI GGYRCC 3 cut(s) 493, 1079, 1211
BsiHKCI CYCGRG 1 cut(s) 265
BsiSI CCGG 5 cut(s) 260, 266, 315, 983, 1001
BslFI GGGAC 3 cut(s) 382, 550, 1268
BslI CCNNNNNNNGG 5 cut(s) 265, 266, 350, 968, 969
BsmAI GTCTC 2 cut(s) 142, 249
BsmFI GGGAC 3 cut(s) 382, 550, 1268
BsnI GGCC 6 cut(s) 578, 734, 846, 1000, 1096, 1528
BsoBI CYCGRG 1 cut(s) 265
Bsp143I GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 2 cut(s) 58, 375
BspACI CCGC 3 cut(s) 66, 807, 890
BspANI GGCC 6 cut(s) 578, 734, 846, 1000, 1096, 1528
BspCNI CTCAG 2 cut(s) 373, 870
BspHI TCATGA 1 cut(s) 408
BspPI GGATC 2 cut(s) 416, 1111
BspT107I GGYRCC 3 cut(s) 493, 1079, 1211
BsrDI GCAATG 2 cut(s) 561, 899
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 2 cut(s) 204, 1280
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 9 cut(s) 10, 58, 265, 375, 399, 489, 579, 841, 1064
BssMI GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
BssNI GRCGYC 3 cut(s) 312, 723, 1314
BssT1I CCWWGG 3 cut(s) 58, 375, 579
Bst2UI CCWGG 2 cut(s) 401, 1066
Bst4CI ACNGT 5 cut(s) 677, 769, 1084, 1153, 1420
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 3 cut(s) 312, 723, 1314
BstBAI YACGTR 1 cut(s) 921
BstC8I GCNNGC 2 cut(s) 316, 366
BstDEI CTNAG 4 cut(s) 360, 878, 1322, 1485
BstDSI CCRYGG 4 cut(s) 10, 58, 375, 841
BstEII GGTNACC 1 cut(s) 584
BstF5I GGATG 9 cut(s) 147, 181, 409, 497, 758, 820, 991, 1204, 1547
BstHHI GCGC 1 cut(s) 225
BstKTI GATC 6 cut(s) 135, 424, 793, 949, 1106, 1547
BstMAI GTCTC 2 cut(s) 142, 249
BstMBI GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
BstMWI GCNNNNNNNGC 6 cut(s) 72, 75, 177, 365, 731, 751
BstNI CCWGG 2 cut(s) 401, 1066
BstPAI GACNNNNGTC 1 cut(s) 267
BstPI GGTNACC 1 cut(s) 584
BstSCI CCNGG 6 cut(s) 258, 264, 265, 399, 981, 1064
BstV1I GCAGC 6 cut(s) 27, 81, 84, 87, 741, 1367
BstV2I GAAGAC 1 cut(s) 1317
BsuRI GGCC 6 cut(s) 578, 734, 846, 1000, 1096, 1528
BtgI CCRYGG 4 cut(s) 10, 58, 375, 841
BtgZI GCGATG 1 cut(s) 810
BtsCI GGATG 9 cut(s) 147, 181, 409, 497, 758, 820, 991, 1204, 1547
BtsIMutI CAGTG 3 cut(s) 211, 765, 1440
Cac8I GCNNGC 2 cut(s) 316, 366
CaiI CAGNNNCTG 1 cut(s) 1151
CciI TCATGA 1 cut(s) 408
CfoI GCGC 1 cut(s) 225
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 6 cut(s) 262, 306, 733, 998, 1094, 1527
Cfr9I CCCGGG 1 cut(s) 265
CseI GACGC 4 cut(s) 320, 555, 731, 1322
Csp6I GTAC 5 cut(s) 697, 838, 1080, 1212, 1343
CviQI GTAC 5 cut(s) 697, 838, 1080, 1212, 1343
DdeI CTNAG 4 cut(s) 360, 878, 1322, 1485
DpnI GATC 6 cut(s) 134, 423, 792, 948, 1105, 1546
DpnII GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
EaeI YGGCCR 2 cut(s) 576, 844
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Eco130I CCWWGG 3 cut(s) 58, 375, 579
Eco47I GGWCC 2 cut(s) 262, 306
Eco57I CTGAAG 1 cut(s) 1464
Eco88I CYCGRG 1 cut(s) 265
Eco91I GGTNACC 1 cut(s) 584
EcoO109I RGGNCCY 1 cut(s) 1527
EcoO65I GGTNACC 1 cut(s) 584
EcoRI GAATTC 2 cut(s) 461, 1117
EcoRII CCWGG 2 cut(s) 399, 1064
EcoT14I CCWWGG 3 cut(s) 58, 375, 579
ErhI CCWWGG 3 cut(s) 58, 375, 579
FalI AAGNNNNNCTT 4 cut(s) 212, 244, 1437, 1469
FaqI GGGAC 3 cut(s) 382, 550, 1268
FauI CCCGC 1 cut(s) 814
FblI GTMKAC 3 cut(s) 255, 441, 867
Fnu4HI GCNGC 7 cut(s) 16, 67, 70, 73, 76, 755, 1356
FokI GGATG 9 cut(s) 154, 188, 416, 484, 745, 807, 998, 1211, 1534
Fsp4HI GCNGC 7 cut(s) 16, 67, 70, 73, 76, 755, 1356
GlaI GCGC 1 cut(s) 224
GluI GCNGC 7 cut(s) 16, 67, 70, 73, 76, 755, 1356
GsaI CCCAGC 1 cut(s) 981
HaeIII GGCC 6 cut(s) 578, 734, 846, 1000, 1096, 1528
HapII CCGG 5 cut(s) 260, 266, 315, 983, 1001
HgaI GACGC 4 cut(s) 320, 555, 731, 1322
HhaI GCGC 1 cut(s) 225
Hin1I GRCGYC 3 cut(s) 312, 723, 1314
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HincII GTYRAC 2 cut(s) 256, 475
HindII GTYRAC 2 cut(s) 256, 475
HindIII AAGCTT 1 cut(s) 1319
HinfI GANTC 6 cut(s) 150, 185, 242, 514, 886, 1461
HpaII CCGG 5 cut(s) 260, 266, 315, 983, 1001
HphI GGTGA 3 cut(s) 115, 1098, 1551
Hpy166II GTNNAC 5 cut(s) 256, 442, 475, 838, 868
Hpy188I TCNGA 8 cut(s) 184, 310, 345, 460, 660, 1047, 1116, 1123
Hpy188III TCNNGA 7 cut(s) 85, 330, 409, 425, 607, 1262, 1519
Hpy8I GTNNAC 5 cut(s) 256, 442, 475, 838, 868
Hpy99I CGWCG 4 cut(s) 257, 314, 331, 437
HpyAV CCTTC 6 cut(s) 617, 736, 1153, 1214, 1421, 1426
HpyCH4III ACNGT 5 cut(s) 677, 769, 1084, 1153, 1420
HpyCH4IV ACGT 2 cut(s) 252, 920
HpyCH4V TGCA 6 cut(s) 551, 740, 1231, 1348, 1355, 1451
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 75, 177, 365, 731, 751
HpyF3I CTNAG 4 cut(s) 360, 878, 1322, 1485
HpySE526I ACGT 2 cut(s) 252, 920
Hsp92I GRCGYC 3 cut(s) 312, 723, 1314
HspAI GCGC 1 cut(s) 223
KpnI GGTACC 2 cut(s) 1083, 1215
KroI GCCGGC 1 cut(s) 314
KroNI GCCGGC 1 cut(s) 316
Kzo9I GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
LmnI GCTCC 4 cut(s) 23, 185, 775, 1003
Lsp1109I GCAGC 6 cut(s) 27, 81, 84, 87, 741, 1367
LweI GCATC 2 cut(s) 234, 1438
MaeII ACGT 2 cut(s) 252, 920
MaeIII GTNAC 5 cut(s) 206, 269, 567, 584, 1388
MalI GATC 6 cut(s) 134, 423, 792, 948, 1105, 1546
MboI GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
MlsI TGGCCA 1 cut(s) 578
MluCI AATT 7 cut(s) 461, 679, 1117, 1124, 1140, 1328, 1512
MluNI TGGCCA 1 cut(s) 578
MlyI GAGTC 4 cut(s) 144, 194, 251, 895
MmeI TCCRAC 4 cut(s) 213, 333, 683, 1070
Mox20I TGGCCA 1 cut(s) 578
MroNI GCCGGC 1 cut(s) 314
MroXI GAANNNNTTC 2 cut(s) 416, 1163
MscI TGGCCA 1 cut(s) 578
MseI TTAA 3 cut(s) 1155, 1455, 1500
MslI CAYNNNNRTG 5 cut(s) 95, 392, 717, 770, 1055
Msp20I TGGCCA 1 cut(s) 578
MspI CCGG 5 cut(s) 260, 266, 315, 983, 1001
MspR9I CCNGG 6 cut(s) 260, 266, 267, 401, 983, 1066
MvaI CCWGG 2 cut(s) 401, 1066
MwoI GCNNNNNNNGC 6 cut(s) 72, 75, 177, 365, 731, 751
NaeI GCCGGC 1 cut(s) 316
NciI CCSGG 4 cut(s) 260, 266, 267, 983
NcoI CCATGG 2 cut(s) 58, 375
NdeII GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
NgoMIV GCCGGC 1 cut(s) 314
NmuCI GTSAC 3 cut(s) 206, 269, 567
OliI CACNNNNGTG 1 cut(s) 770
PagI TCATGA 1 cut(s) 408
PdiI GCCGGC 1 cut(s) 316
PdmI GAANNNNTTC 2 cut(s) 416, 1163
PfeI GAWTC 2 cut(s) 514, 1461
PflFI GACNNNGTC 1 cut(s) 431
PkrI GCNGC 7 cut(s) 17, 68, 71, 74, 77, 756, 1357
PleI GAGTC 4 cut(s) 144, 193, 250, 894
PpsI GAGTC 4 cut(s) 144, 193, 250, 894
Ppu21I YACGTR 1 cut(s) 921
PshAI GACNNNNGTC 1 cut(s) 267
Psp6I CCWGG 2 cut(s) 399, 1064
PspEI GGTNACC 1 cut(s) 584
PspFI CCCAGC 1 cut(s) 977
PspGI CCWGG 2 cut(s) 399, 1064
PspPI GGNCC 6 cut(s) 262, 306, 733, 998, 1094, 1527
PstNI CAGNNNCTG 1 cut(s) 1151
PsyI GACNNNGTC 1 cut(s) 431
RsaI GTAC 5 cut(s) 698, 839, 1081, 1213, 1344
RsaNI GTAC 5 cut(s) 697, 838, 1080, 1212, 1343
RseI CAYNNNNRTG 5 cut(s) 95, 392, 717, 770, 1055
SalI GTCGAC 1 cut(s) 254
SaqAI TTAA 3 cut(s) 1155, 1455, 1500
SatI GCNGC 7 cut(s) 16, 67, 70, 73, 76, 755, 1356
Sau3AI GATC 6 cut(s) 132, 421, 790, 946, 1103, 1544
Sau96I GGNCC 6 cut(s) 262, 306, 733, 998, 1094, 1527
ScaI AGTACT 1 cut(s) 698
SchI GAGTC 4 cut(s) 144, 194, 251, 895
ScrFI CCNGG 6 cut(s) 260, 266, 267, 401, 983, 1066
SfaNI GCATC 2 cut(s) 234, 1438
SinI GGWCC 2 cut(s) 262, 306
SmaI CCCGGG 1 cut(s) 267
SmiMI CAYNNNNRTG 5 cut(s) 95, 392, 717, 770, 1055
SmlI CTYRAG 2 cut(s) 692, 794
SmoI CTYRAG 2 cut(s) 692, 794
Sse9I AATT 7 cut(s) 461, 679, 1117, 1124, 1140, 1328, 1512
SsiI CCGC 3 cut(s) 66, 807, 890
StyD4I CCNGG 6 cut(s) 258, 264, 265, 399, 981, 1064
StyI CCWWGG 3 cut(s) 58, 375, 579
TaaI ACNGT 5 cut(s) 677, 769, 1084, 1153, 1420
TaiI ACGT 2 cut(s) 255, 923
TaqI TCGA 6 cut(s) 123, 218, 255, 420, 606, 1467
TasI AATT 7 cut(s) 461, 679, 1117, 1124, 1140, 1328, 1512
TatI WGTACW 1 cut(s) 696
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 2 cut(s) 514, 1461
Tru1I TTAA 3 cut(s) 1155, 1455, 1500
Tru9I TTAA 3 cut(s) 1155, 1455, 1500
TscAI CASTG 3 cut(s) 211, 772, 1447
TseFI GTSAC 3 cut(s) 206, 269, 567
TseI GCWGC 6 cut(s) 15, 69, 72, 75, 754, 1355
Tsp45I GTSAC 3 cut(s) 206, 269, 567
TspMI CCCGGG 1 cut(s) 265
TspRI CASTG 3 cut(s) 211, 772, 1447
Tth111I GACNNNGTC 1 cut(s) 431
VpaK11BI GGWCC 2 cut(s) 262, 306
XapI RAATTY 4 cut(s) 461, 1117, 1124, 1328
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XmaI CCCGGG 1 cut(s) 265
XmiI GTMKAC 3 cut(s) 255, 441, 867
XmnI GAANNNNTTC 2 cut(s) 416, 1163
ZrmI AGTACT 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.