Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G14120 AT2G14120 AT2G14120 AT2G14120 AT4G33650 AT4G33650 |
| fragaria_vesca | FvH4_2g11510 FvH4_2g11510 FvH4_2g11510 FvH4_2g11510 |
| malus_domestica | MD05G1049000.v1.1 MD10G1055800.v1.1 |
| prunus_persica | Prupe.8G071400_v2.0.a1 Prupe.8G071400_v2.0.a1 |
| pyrus_communis | pycom05g04070 pycom05g04080 pycom10g04290 |
| rosa_chinensis | RchiOBHm_Chr6g0270491 |
| rosa_laevigata | RLG00000013786 |
| rosa_multiflora | Rmu_co8311497.1_g000001 Rmu_sc0009291.1_g000006 Rmu_sc0021982.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00197890 |
| rosa_rugosa | Rorug06G0054900 |
| rosa_samantha | Rh6CG173300 Rh6DG165800 |
| rosa_wichuraiana | Rw6G014820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 95 |
| AclWI | GGATC | 1 cut(s) | 16 |
| AfaI | GTAC | 1 cut(s) | 159 |
| AgsI | TTSAA | 2 cut(s) | 52, 89 |
| Alw26I | GTCTC | 1 cut(s) | 74 |
| AlwI | GGATC | 1 cut(s) | 16 |
| BanII | GRGCYC | 1 cut(s) | 39 |
| BcoDI | GTCTC | 1 cut(s) | 74 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BsmAI | GTCTC | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 1 cut(s) | 39 |
| Bsp143I | GATC | 2 cut(s) | 21, 116 |
| BspACI | CCGC | 1 cut(s) | 95 |
| BspCNI | CTCAG | 1 cut(s) | 83 |
| BspPI | GGATC | 1 cut(s) | 16 |
| BssMI | GATC | 2 cut(s) | 21, 116 |
| Bst4CI | ACNGT | 1 cut(s) | 46 |
| BstDEI | CTNAG | 1 cut(s) | 70 |
| BstKTI | GATC | 2 cut(s) | 24, 119 |
| BstMAI | GTCTC | 1 cut(s) | 74 |
| BstMBI | GATC | 2 cut(s) | 21, 116 |
| Csp6I | GTAC | 1 cut(s) | 158 |
| CviJI | RGCY | 3 cut(s) | 11, 37, 55 |
| CviKI_1 | RGCY | 3 cut(s) | 11, 37, 55 |
| CviQI | GTAC | 1 cut(s) | 158 |
| DdeI | CTNAG | 1 cut(s) | 70 |
| DpnI | GATC | 2 cut(s) | 23, 118 |
| DpnII | GATC | 2 cut(s) | 21, 116 |
| Eco24I | GRGCYC | 1 cut(s) | 39 |
| EcoT38I | GRGCYC | 1 cut(s) | 39 |
| FaiI | YATR | 5 cut(s) | 14, 20, 121, 126, 146 |
| FriOI | GRGCYC | 1 cut(s) | 39 |
| HinfI | GANTC | 1 cut(s) | 152 |
| Hpy188I | TCNGA | 1 cut(s) | 73 |
| Hpy188III | TCNNGA | 1 cut(s) | 49 |
| HpyCH4III | ACNGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 1 cut(s) | 175 |
| HpyF3I | CTNAG | 1 cut(s) | 70 |
| Kzo9I | GATC | 2 cut(s) | 21, 116 |
| LpnPI | CCDG | 1 cut(s) | 62 |
| MaeIII | GTNAC | 1 cut(s) | 97 |
| MalI | GATC | 2 cut(s) | 23, 118 |
| MboI | GATC | 2 cut(s) | 21, 116 |
| MboII | GAAGA | 1 cut(s) | 151 |
| MfeI | CAATTG | 1 cut(s) | 84 |
| MhlI | GDGCHC | 1 cut(s) | 39 |
| MluCI | AATT | 2 cut(s) | 84, 90 |
| MlyI | GAGTC | 1 cut(s) | 146 |
| MnlI | CCTC | 1 cut(s) | 142 |
| MseI | TTAA | 2 cut(s) | 29, 113 |
| MslI | CAYNNNNRTG | 1 cut(s) | 17 |
| MunI | CAATTG | 1 cut(s) | 84 |
| NdeII | GATC | 2 cut(s) | 21, 116 |
| NmuCI | GTSAC | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 146 |
| PpsI | GAGTC | 1 cut(s) | 146 |
| RsaI | GTAC | 1 cut(s) | 159 |
| RsaNI | GTAC | 1 cut(s) | 158 |
| RseI | CAYNNNNRTG | 1 cut(s) | 17 |
| SaqAI | TTAA | 2 cut(s) | 29, 113 |
| Sau3AI | GATC | 2 cut(s) | 21, 116 |
| SchI | GAGTC | 1 cut(s) | 146 |
| SduI | GDGCHC | 1 cut(s) | 39 |
| SgeI | CNNG | 3 cut(s) | 20, 61, 89 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 17 |
| Sse9I | AATT | 2 cut(s) | 84, 90 |
| SsiI | CCGC | 1 cut(s) | 95 |
| TaaI | ACNGT | 1 cut(s) | 46 |
| TasI | AATT | 2 cut(s) | 84, 90 |
| Tru1I | TTAA | 2 cut(s) | 29, 113 |
| Tru9I | TTAA | 2 cut(s) | 29, 113 |
| TseFI | GTSAC | 1 cut(s) | 97 |
| Tsp45I | GTSAC | 1 cut(s) | 97 |