Rmu_co8360215.1_g000001

Anaphase-promoting complex subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8360215.1
Physical Location & Seq
Reverse (-)
32 .. 907
876 bp
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UTR
Exon/CDS
Intron
Rmu_co8360215.1_g000001.1.cds

Sequence Viewer

Length: 252 bp
atggtaaagccgtcgccgtcgggctcgaagatggaacagtctcattgcatgatgttgaatgaacttgttgttatattcttgaagtttctatatgaccaagatcctgttaagcagttgctggaggtgtcggaagctgatgagagtatcgaagttggattggaaacggtgcagagagttagagaattagttcagtttgggggagtttcagattgtgagcacctgcagaggacgttagccaaggaatttcagtag

Protein Analysis

83

Amino Acids

9.47

Weight (kDa)

4.74

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019013)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0006431
rosa_laevigata RLG00000031360
rosa_multiflora Rmu_co8360215.1_g000001 Rmu_sc0008991.1_g000006 Rmu_sc0036442.1_g000001
rosa_roxburghii Rroxscaffold_1G00069550
rosa_rugosa Rorug05G0252100
rosa_samantha Rh5CG363500
rosa_wichuraiana Rw5G004920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 228
Acc36I ACCTGC 1 cut(s) 228
AclWI GGATC 1 cut(s) 95
AcsI RAATTY 1 cut(s) 242
AgsI TTSAA 2 cut(s) 58, 82
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 1 cut(s) 45
AlwI GGATC 1 cut(s) 95
AlwNI CAGNNNCTG 1 cut(s) 118
ApoI RAATTY 1 cut(s) 242
Asp700I GAANNNNTTC 1 cut(s) 186
BanII GRGCYC 1 cut(s) 26
Bbv12I GWGCWC 1 cut(s) 219
BccI CCATC 1 cut(s) 25
BcoDI GTCTC 1 cut(s) 45
BfmI CTRYAG 1 cut(s) 221
BfuAI ACCTGC 1 cut(s) 228
BpmI CTGGAG 1 cut(s) 140
BsaJI CCNNGG 1 cut(s) 237
Bse3DI GCAATG 1 cut(s) 43
BseDI CCNNGG 1 cut(s) 237
BseMI GCAATG 1 cut(s) 43
BsgI GTGCAG 1 cut(s) 188
BsiHKAI GWGCWC 1 cut(s) 219
BsmAI GTCTC 1 cut(s) 45
Bsp1286I GDGCHC 2 cut(s) 26, 219
Bsp143I GATC 1 cut(s) 100
BspMAI CTGCAG 1 cut(s) 225
BspMI ACCTGC 1 cut(s) 228
BspPI GGATC 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 43
BssECI CCNNGG 1 cut(s) 237
BssMI GATC 1 cut(s) 100
BssT1I CCWWGG 1 cut(s) 237
Bst4CI ACNGT 2 cut(s) 39, 166
BstKTI GATC 1 cut(s) 103
BstMAI GTCTC 1 cut(s) 45
BstMBI GATC 1 cut(s) 100
BstSFI CTRYAG 1 cut(s) 221
BstX2I RGATCY 1 cut(s) 100
BstYI RGATCY 1 cut(s) 100
BveI ACCTGC 1 cut(s) 228
CaiI CAGNNNCTG 1 cut(s) 118
CviAII CATG 1 cut(s) 49
CviJI RGCY 4 cut(s) 10, 24, 134, 236
CviKI_1 RGCY 4 cut(s) 10, 24, 134, 236
DpnI GATC 1 cut(s) 102
DpnII GATC 1 cut(s) 100
Eco130I CCWWGG 1 cut(s) 237
Eco24I GRGCYC 1 cut(s) 26
EcoT14I CCWWGG 1 cut(s) 237
EcoT38I GRGCYC 1 cut(s) 26
ErhI CCWWGG 1 cut(s) 237
FaeI CATG 1 cut(s) 52
FaiI YATR 4 cut(s) 50, 74, 91, 93
FatI CATG 1 cut(s) 48
FriOI GRGCYC 1 cut(s) 26
GsuI CTGGAG 1 cut(s) 140
Hin1II CATG 1 cut(s) 52
Hpy188I TCNGA 2 cut(s) 130, 208
Hpy188III TCNNGA 1 cut(s) 79
Hpy99I CGWCG 2 cut(s) 16, 22
HpyCH4III ACNGT 2 cut(s) 39, 166
HpyCH4IV ACGT 1 cut(s) 230
HpyCH4V TGCA 3 cut(s) 48, 169, 223
HpySE526I ACGT 1 cut(s) 230
Hsp92II CATG 1 cut(s) 52
Kzo9I GATC 1 cut(s) 100
LpnPI CCDG 3 cut(s) 104, 117, 233
MaeII ACGT 1 cut(s) 230
MalI GATC 1 cut(s) 102
MboI GATC 1 cut(s) 100
MboII GAAGA 1 cut(s) 40
MflI RGATCY 1 cut(s) 100
MhlI GDGCHC 2 cut(s) 26, 219
MluCI AATT 2 cut(s) 182, 242
MmeI TCCRAC 2 cut(s) 108, 133
MnlI CCTC 2 cut(s) 115, 219
MroXI GAANNNNTTC 1 cut(s) 186
MseI TTAA 1 cut(s) 108
NdeII GATC 1 cut(s) 100
NlaIII CATG 1 cut(s) 52
PaqCI CACCTGC 1 cut(s) 228
PdmI GAANNNNTTC 1 cut(s) 186
PstI CTGCAG 1 cut(s) 225
PstNI CAGNNNCTG 1 cut(s) 118
PsuI RGATCY 1 cut(s) 100
SaqAI TTAA 1 cut(s) 108
Sau3AI GATC 1 cut(s) 100
SduI GDGCHC 2 cut(s) 26, 219
SetI ASST 4 cut(s) 126, 136, 222, 233
SfcI CTRYAG 1 cut(s) 221
SgeI CNNG 9 cut(s) 33, 37, 61, 77, 91, 110, 116, 131, 232
Sse9I AATT 2 cut(s) 182, 242
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 2 cut(s) 39, 166
TaiI ACGT 1 cut(s) 233
TaqI TCGA 2 cut(s) 26, 147
TasI AATT 2 cut(s) 182, 242
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TspDTI ATGAA 1 cut(s) 75
XapI RAATTY 1 cut(s) 242
XmnI GAANNNNTTC 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.