Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0019013

Physical Location & Seq

Genomic Coordinates Reverse (-)

43695392 .. 43699709

Gene Structure 4318 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG363500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGTAAAGCAATCGCCCGTCGGGCTCGAAGATGGAGCAGTTTCATTGCATGATGTTGAAAATGGAAAGTTGTTGAGGAGCTTGAAATCACATACTGTGGCTGTTGTTTCTCTTAATTGGGAGGAGGATGGACAGATGACTAGAGATGAGTATGGCAGCCACTCGGTATATGAAGACCGTACTTCTCGTTTCTTTCCACCACCTCCAAGAGTTCCGCGAATGCCTGGACTGGTATCTGGAGAGACCGGTTTCATGGATGATAGTGAAGATTCATTCCGAGAGCTGTCAAATTCTTCACAGCAACATTTTAATATCCTCTGCAGTGGAGATAAAGATGGATTCATTTGCTTTAGTATATTTGGGATCTTTCCGATAGGGAAAATTAACATACACAACTTTGGTGCTGCTAGTCCACTTAAGGATACTGAACCTGAGTGTAGACTTCTGCATGCTTCTGTTTACAAGGTTGCTTTGTCAAAAGATCTTTGTCATTTGATAGTCGTGTGTTCAGGAGAATTAATTGAAGATAGGGAAGAATCAGAAAACAGGCAGATGACTGAACCTGGTATGCATGGCTTACATTGCATAGTGCTTGATACATTTATATTTTGGAAGAGAAAAAGTGAGCTTCATCAAGTGGCGCAACAAGCTTCTAACATTGAGGAATTGGCAGAGGACTTCCAGTCCTCTCCCCAAGAGGAGTTTTTGAGTCTTTTAGGCGGTGCAAGGACTAGTCCAGCAGTTCATCAGTTTCTAGTTAACTCTCTCGGTGAAGTGGGTGTGAAGCGCGTGTCAAAAGCTGTTTGTGGTGCTGGGAAAGAACTGCAGCTTATAATCCTAAATCATCTCCAGCCTGCTGCAGAAATTATTGCATTCAGGATGGGAGAACTAGGGGGCCTTTCACGATGGAGAGCACGCTATCAGGGCATCGGTTTGGATGAGTCGCTGATCAATAATGCAACACAAAAAGCTGGAATGATACTTGTACAAGTTGAATGGTTTATCAGGGTGCTGGCATCTGTGGTGCAGCAGTTTTCGAACTTCTTCAATTGGCTCTTGAAGTGTATAAAGTTACTCAATTCAGAACCCAGTGATCATCATCTTCTACTGTACAATAGTGAACTTGTTGTTATATTCTTGAAGTTTCTATATGACCAAGATCCTGTTAAGCAGTTGCTGGAGGCGTCGGAAGCTGATGAGAGTATAGAAGTTGGATTGGAAACAGTGCAGAAAGTTAGAGAATTAGTTCAGTTTGGGGGATTTTCAGATTGTGAGCACCTGCAGAGGACGTTAGCCAAGGAATTTCAACAGATGGAGTCTAGTTTTAAGGAGGCTTTCCAGATGCCCTTTACTACAATTTCAAGAAAGATAGTCTGCGAAGATTCATTGCCGCTTTGCCCACTTCCACCTTTGTCAGCATCTTTGTCTACCAGTATTTCTATGTCAGTATCATATTATGAGGATGCCTCCCATTCCGTCCCTCATCAGACTCGTCAACATATGTTTCTTGACTACATATCTTTCCATATACCAGATGAGTCCTTCTCCGGTATGGAAAATTATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC4 ANAPC4_WD40

Protein Analysis

522

Amino Acids

58.63

Weight (kDa)

5.15

Isoelectric Point (pI)

50.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANAPC4	PF12896	221 - 362	1.1e-38	Anaphase-promoting complex, cyclosome, subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019013)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0006431
rosa_laevigata	RLG00000031360
rosa_multiflora	Rmu_co8360215.1_g000001 Rmu_sc0008991.1_g000006 Rmu_sc0036442.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069550
rosa_rugosa	Rorug05G0252100
rosa_samantha	Rh5CG363500
rosa_wichuraiana	Rw5G004920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	833
AarI	CACCTGC	1 cut(s)	1287
Acc36I	ACCTGC	1 cut(s)	1287
AccI	GTMKAC	2 cut(s)	439, 1427
AccII	CGCG	2 cut(s)	217, 789
AciI	CCGC	3 cut(s)	215, 720, 1391
AclWI	GGATC	2 cut(s)	371, 1154
AcsI	RAATTY	2 cut(s)	289, 1301
AcyI	GRCGYC	1 cut(s)	1184
AfaI	GTAC	3 cut(s)	181, 987, 1112
AflII	CTTAAG	1 cut(s)	416
AgeI	ACCGGT	1 cut(s)	245
AgsI	TTSAA	9 cut(s)	59, 85, 524, 995, 1048, 1060, 1141, 1307, 1362
AhdI	GACNNNNNGTC	1 cut(s)	682
AhlI	ACTAGT	1 cut(s)	731
AjnI	CCWGG	2 cut(s)	223, 562
AluBI	AGCT	8 cut(s)	81, 283, 628, 650, 800, 829, 971, 1193
AluI	AGCT	8 cut(s)	81, 283, 628, 650, 800, 829, 971, 1193
Alw21I	GWGCWC	2 cut(s)	916, 1278
Alw26I	GTCTC	1 cut(s)	236
AlwI	GGATC	2 cut(s)	371, 1154
AlwNI	CAGNNNCTG	1 cut(s)	1177
AoxI	GGCC	1 cut(s)	895
ApeKI	GCWGC	5 cut(s)	156, 404, 826, 857, 1027
ApoI	RAATTY	2 cut(s)	289, 1301
AseI	ATTAAT	1 cut(s)	518
AsiGI	ACCGGT	1 cut(s)	245
Asp700I	GAANNNNTTC	2 cut(s)	1043, 1245
AspLEI	GCGC	2 cut(s)	643, 789
AspS9I	GGNCC	1 cut(s)	895
AsuHPI	GGTGA	1 cut(s)	782
AsuII	TTCGAA	1 cut(s)	1037
BanII	GRGCYC	1 cut(s)	27
BbsI	GAAGAC	1 cut(s)	180
Bbv12I	GWGCWC	2 cut(s)	916, 1278
BbvI	GCAGC	5 cut(s)	168, 391, 838, 844, 1039
BccI	CCATC	6 cut(s)	26, 122, 329, 874, 900, 1306
BciT130I	CCWGG	2 cut(s)	225, 564
BciVI	GTATCC	1 cut(s)	415
BclI	TGATCA	2 cut(s)	948, 1093
BcoDI	GTCTC	1 cut(s)	236
BcuI	ACTAGT	1 cut(s)	731
BfaI	CTAG	6 cut(s)	141, 408, 732, 755, 890, 1320
BfmI	CTRYAG	4 cut(s)	319, 824, 858, 1280
BfrI	CTTAAG	1 cut(s)	416
BfuAI	ACCTGC	1 cut(s)	1287
BfuI	GTATCC	1 cut(s)	415
BglI	GCCNNNNNGGC	1 cut(s)	22
BglII	AGATCT	1 cut(s)	481
BisI	GCNGC	6 cut(s)	157, 405, 827, 858, 1028, 1391
BlsI	GCNGC	6 cut(s)	158, 406, 828, 859, 1029, 1392
Bme1390I	CCNGG	2 cut(s)	225, 564
BmeRI	GACNNNNNGTC	1 cut(s)	682
BmgT120I	GGNCC	1 cut(s)	895
BmiI	GGNNCC	1 cut(s)	896
BmrFI	CCNGG	2 cut(s)	225, 564
BmrI	ACTGGG	1 cut(s)	1083
BmsI	GCATC	5 cut(s)	936, 1025, 1332, 1427, 1453
BmuI	ACTGGG	1 cut(s)	1083
BpiI	GAAGAC	1 cut(s)	180
BplI	GAGNNNNNCTC	4 cut(s)	1451, 1483, 1529, 1561
BpmI	CTGGAG	3 cut(s)	258, 833, 1199
Bpu14I	TTCGAA	1 cut(s)	1037
BsaBI	GATNNNNATC	1 cut(s)	1098
BsaHI	GRCGYC	1 cut(s)	1184
BsaI	GGTCTC	1 cut(s)	236
BsaJI	CCNNGG	1 cut(s)	1296
BsaWI	WCCGGW	2 cut(s)	245, 1547
Bse118I	RCCGGY	1 cut(s)	245
Bse1I	ACTGG	4 cut(s)	234, 682, 1089, 1431
Bse3DI	GCAATG	3 cut(s)	44, 580, 1385
Bse8I	GATNNNNATC	1 cut(s)	1098
BseBI	CCWGG	2 cut(s)	225, 564
BseDI	CCNNGG	1 cut(s)	1296
BseGI	GGATG	5 cut(s)	133, 262, 885, 943, 1468
BseJI	GATNNNNATC	1 cut(s)	1098
BseMI	GCAATG	3 cut(s)	44, 580, 1385
BseMII	CTCAG	1 cut(s)	423
BseNI	ACTGG	4 cut(s)	234, 682, 1089, 1431
BseRI	GAGGAG	3 cut(s)	91, 137, 713
BseXI	GCAGC	5 cut(s)	168, 391, 838, 844, 1039
BseYI	CCCAGC	1 cut(s)	812
BsgI	GTGCAG	2 cut(s)	1046, 1247
Bsh1236I	CGCG	2 cut(s)	217, 789
BshFI	GGCC	1 cut(s)	897
BshTI	ACCGGT	1 cut(s)	245
BsiHKAI	GWGCWC	2 cut(s)	916, 1278
BsiSI	CCGG	2 cut(s)	246, 1548
BslFI	GGGAC	1 cut(s)	1463
BsmAI	GTCTC	1 cut(s)	236
BsmFI	GGGAC	1 cut(s)	1463
BsmI	GAATGC	2 cut(s)	225, 872
BsnI	GGCC	1 cut(s)	897
Bso31I	GGTCTC	1 cut(s)	236
Bsp119I	TTCGAA	1 cut(s)	1037
Bsp1286I	GDGCHC	3 cut(s)	27, 916, 1278
Bsp1407I	TGTACA	2 cut(s)	985, 1110
Bsp143I	GATC	5 cut(s)	363, 481, 948, 1093, 1159
BspACI	CCGC	3 cut(s)	215, 720, 1391
BspANI	GGCC	1 cut(s)	897
BspCNI	CTCAG	1 cut(s)	424
BspFNI	CGCG	2 cut(s)	217, 789
BspLI	GGNNCC	1 cut(s)	896
BspMAI	CTGCAG	4 cut(s)	323, 828, 862, 1284
BspMI	ACCTGC	1 cut(s)	1287
BspPI	GGATC	2 cut(s)	371, 1154
BspT104I	TTCGAA	1 cut(s)	1037
BspTI	CTTAAG	1 cut(s)	416
BspTNI	GGTCTC	1 cut(s)	236
BsrDI	GCAATG	3 cut(s)	44, 580, 1385
BsrFI	RCCGGY	1 cut(s)	245
BsrGI	TGTACA	2 cut(s)	985, 1110
BsrI	ACTGG	4 cut(s)	234, 682, 1089, 1431
BssAI	RCCGGY	1 cut(s)	245
BssECI	CCNNGG	1 cut(s)	1296
BssMI	GATC	5 cut(s)	363, 481, 948, 1093, 1159
BssNI	GRCGYC	1 cut(s)	1184
BssT1I	CCWWGG	1 cut(s)	1296
Bst2UI	CCWGG	2 cut(s)	225, 564
Bst4CI	ACNGT	4 cut(s)	97, 179, 1110, 1225
Bst6I	CTCTTC	1 cut(s)	608
BstACI	GRCGYC	1 cut(s)	1184
BstAFI	CTTAAG	1 cut(s)	416
BstAUI	TGTACA	2 cut(s)	985, 1110
BstBI	TTCGAA	1 cut(s)	1037
BstC8I	GCNNGC	4 cut(s)	450, 855, 916, 1014
BstDEI	CTNAG	1 cut(s)	432
BstF5I	GGATG	5 cut(s)	133, 262, 885, 943, 1468
BstFNI	CGCG	2 cut(s)	217, 789
BstHHI	GCGC	2 cut(s)	643, 789
BstKTI	GATC	5 cut(s)	366, 484, 951, 1096, 1162
BstMAI	GTCTC	1 cut(s)	236
BstMBI	GATC	5 cut(s)	363, 481, 948, 1093, 1159
BstMWI	GCNNNNNNNGC	5 cut(s)	22, 582, 647, 924, 1190
BstNI	CCWGG	2 cut(s)	225, 564
BstNSI	RCATGY	1 cut(s)	452
BstSCI	CCNGG	2 cut(s)	223, 562
BstSFI	CTRYAG	4 cut(s)	319, 824, 858, 1280
BstUI	CGCG	2 cut(s)	217, 789
BstV1I	GCAGC	5 cut(s)	168, 391, 838, 844, 1039
BstV2I	GAAGAC	1 cut(s)	180
BstX2I	RGATCY	3 cut(s)	363, 481, 1159
BstYI	RGATCY	3 cut(s)	363, 481, 1159
BsuI	GTATCC	1 cut(s)	415
BsuRI	GGCC	1 cut(s)	897
BtsCI	GGATG	5 cut(s)	133, 262, 885, 943, 1468
BtsI	GCAGTG	1 cut(s)	328
BtsIMutI	CAGTG	3 cut(s)	328, 1096, 1230
BveI	ACCTGC	1 cut(s)	1287
Cac8I	GCNNGC	4 cut(s)	450, 855, 916, 1014
CaiI	CAGNNNCTG	1 cut(s)	1177
CfoI	GCGC	2 cut(s)	643, 789
Cfr10I	RCCGGY	1 cut(s)	245
Cfr13I	GGNCC	1 cut(s)	895
CseI	GACGC	1 cut(s)	1173
CsiI	ACCWGGT	1 cut(s)	562
Csp6I	GTAC	3 cut(s)	180, 986, 1111
CspAI	ACCGGT	1 cut(s)	245
CviAII	CATG	5 cut(s)	50, 253, 449, 572, 1566
CviQI	GTAC	3 cut(s)	180, 986, 1111
DdeI	CTNAG	1 cut(s)	432
DpnI	GATC	5 cut(s)	365, 483, 950, 1095, 1161
DpnII	GATC	5 cut(s)	363, 481, 948, 1093, 1159
DriI	GACNNNNNGTC	1 cut(s)	682
Eam1104I	CTCTTC	1 cut(s)	608
Eam1105I	GACNNNNNGTC	1 cut(s)	682
EarI	CTCTTC	1 cut(s)	608
Eco130I	CCWWGG	1 cut(s)	1296
Eco24I	GRGCYC	1 cut(s)	27
Eco31I	GGTCTC	1 cut(s)	236
EcoO109I	RGGNCCY	1 cut(s)	895
EcoRII	CCWGG	2 cut(s)	223, 562
EcoT14I	CCWWGG	1 cut(s)	1296
EcoT22I	ATGCAT	2 cut(s)	573, 1567
EcoT38I	GRGCYC	1 cut(s)	27
ErhI	CCWWGG	1 cut(s)	1296
FaeI	CATG	5 cut(s)	53, 256, 452, 575, 1569
FaqI	GGGAC	1 cut(s)	1463
FatI	CATG	5 cut(s)	49, 252, 448, 571, 1565
FauNDI	CATATG	1 cut(s)	1500
FbaI	TGATCA	2 cut(s)	948, 1093
FblI	GTMKAC	2 cut(s)	439, 1427
Fnu4HI	GCNGC	6 cut(s)	157, 405, 827, 858, 1028, 1391
FokI	GGATG	5 cut(s)	140, 269, 892, 950, 1475
FriOI	GRGCYC	1 cut(s)	27
Fsp4HI	GCNGC	6 cut(s)	157, 405, 827, 858, 1028, 1391
FspBI	CTAG	6 cut(s)	141, 408, 732, 755, 890, 1320
GlaI	GCGC	2 cut(s)	642, 788
GluI	GCNGC	6 cut(s)	157, 405, 827, 858, 1028, 1391
GsaI	CCCAGC	1 cut(s)	816
GsuI	CTGGAG	3 cut(s)	258, 833, 1199
HaeIII	GGCC	1 cut(s)	897
HapII	CCGG	2 cut(s)	246, 1548
HgaI	GACGC	1 cut(s)	1173
HhaI	GCGC	2 cut(s)	643, 789
Hin1I	GRCGYC	1 cut(s)	1184
Hin1II	CATG	5 cut(s)	53, 256, 452, 575, 1569
Hin6I	GCGC	2 cut(s)	641, 787
HinP1I	GCGC	2 cut(s)	641, 787
HincII	GTYRAC	2 cut(s)	760, 1496
HindII	GTYRAC	2 cut(s)	760, 1496
HindIII	AAGCTT	1 cut(s)	648
HinfI	GANTC	9 cut(s)	269, 339, 536, 709, 941, 1316, 1382, 1489, 1538
HpaI	GTTAAC	1 cut(s)	760
HpaII	CCGG	2 cut(s)	246, 1548
HphI	GGTGA	1 cut(s)	782
Hpy166II	GTNNAC	7 cut(s)	413, 440, 460, 760, 1121, 1428, 1496
Hpy188I	TCNGA	7 cut(s)	278, 372, 541, 1084, 1189, 1267, 1488
Hpy188III	TCNNGA	9 cut(s)	237, 510, 877, 903, 1057, 1138, 1339, 1362, 1508
Hpy8I	GTNNAC	7 cut(s)	413, 440, 460, 760, 1121, 1428, 1496
Hpy99I	CGWCG	2 cut(s)	23, 1189
HpyAV	CCTTC	1 cut(s)	1552
HpyCH4III	ACNGT	4 cut(s)	97, 179, 1110, 1225
HpyCH4IV	ACGT	1 cut(s)	1289
HpyF10VI	GCNNNNNNNGC	5 cut(s)	22, 582, 647, 924, 1190
HpyF3I	CTNAG	1 cut(s)	432
HpySE526I	ACGT	1 cut(s)	1289
Hsp92I	GRCGYC	1 cut(s)	1184
Hsp92II	CATG	5 cut(s)	53, 256, 452, 575, 1569
HspAI	GCGC	2 cut(s)	641, 787
Ksp22I	TGATCA	2 cut(s)	948, 1093
KspAI	GTTAAC	1 cut(s)	760
Kzo9I	GATC	5 cut(s)	363, 481, 948, 1093, 1159
LmnI	GCTCC	2 cut(s)	35, 78
Lsp1109I	GCAGC	5 cut(s)	168, 391, 838, 844, 1039
LweI	GCATC	5 cut(s)	936, 1025, 1332, 1427, 1453
MabI	ACCWGGT	1 cut(s)	562
MaeI	CTAG	6 cut(s)	141, 408, 732, 755, 890, 1320
MaeII	ACGT	1 cut(s)	1289
MaeIII	GTNAC	1 cut(s)	1071
MalI	GATC	5 cut(s)	365, 483, 950, 1095, 1161
MboI	GATC	5 cut(s)	363, 481, 948, 1093, 1159
MfeI	CAATTG	1 cut(s)	1048
MflI	RGATCY	3 cut(s)	363, 481, 1159
MhlI	GDGCHC	3 cut(s)	27, 916, 1278
MlyI	GAGTC	5 cut(s)	718, 950, 1325, 1483, 1547
MmeI	TCCRAC	2 cut(s)	1167, 1192
Mph1103I	ATGCAT	2 cut(s)	573, 1567
MroXI	GAANNNNTTC	2 cut(s)	1043, 1245
MseI	TTAA	8 cut(s)	114, 309, 384, 417, 518, 759, 1167, 1326
MspCI	CTTAAG	1 cut(s)	416
MspI	CCGG	2 cut(s)	246, 1548
MspR9I	CCNGG	2 cut(s)	225, 564
MunI	CAATTG	1 cut(s)	1048
Mva1269I	GAATGC	2 cut(s)	225, 872
MvaI	CCWGG	2 cut(s)	225, 564
MvnI	CGCG	2 cut(s)	217, 789
MwoI	GCNNNNNNNGC	5 cut(s)	22, 582, 647, 924, 1190
NdeI	CATATG	1 cut(s)	1500
NdeII	GATC	5 cut(s)	363, 481, 948, 1093, 1159
NlaIII	CATG	5 cut(s)	53, 256, 452, 575, 1569
NlaIV	GGNNCC	1 cut(s)	896
NsiI	ATGCAT	2 cut(s)	573, 1567
NspI	RCATGY	1 cut(s)	452
NspV	TTCGAA	1 cut(s)	1037
PaeI	GCATGC	1 cut(s)	452
PaqCI	CACCTGC	1 cut(s)	1287
PctI	GAATGC	2 cut(s)	225, 872
PdmI	GAANNNNTTC	2 cut(s)	1043, 1245
PfeI	GAWTC	4 cut(s)	269, 339, 536, 1382
PinAI	ACCGGT	1 cut(s)	245
PkrI	GCNGC	6 cut(s)	158, 406, 828, 859, 1029, 1392
PleI	GAGTC	5 cut(s)	717, 949, 1324, 1483, 1546
PpsI	GAGTC	5 cut(s)	717, 949, 1324, 1483, 1546
PshBI	ATTAAT	1 cut(s)	518
PsiI	TTATAA	1 cut(s)	833
Psp6I	CCWGG	2 cut(s)	223, 562
PspFI	CCCAGC	1 cut(s)	812
PspGI	CCWGG	2 cut(s)	223, 562
PspN4I	GGNNCC	1 cut(s)	896
PspPI	GGNCC	1 cut(s)	895
PstI	CTGCAG	4 cut(s)	323, 828, 862, 1284
PstNI	CAGNNNCTG	1 cut(s)	1177
PsuI	RGATCY	3 cut(s)	363, 481, 1159
RsaI	GTAC	3 cut(s)	181, 987, 1112
RsaNI	GTAC	3 cut(s)	180, 986, 1111
SaqAI	TTAA	8 cut(s)	114, 309, 384, 417, 518, 759, 1167, 1326
SatI	GCNGC	6 cut(s)	157, 405, 827, 858, 1028, 1391
Sau3AI	GATC	5 cut(s)	363, 481, 948, 1093, 1159
Sau96I	GGNCC	1 cut(s)	895
SchI	GAGTC	5 cut(s)	718, 950, 1325, 1483, 1547
ScrFI	CCNGG	2 cut(s)	225, 564
SduI	GDGCHC	3 cut(s)	27, 916, 1278
SexAI	ACCWGGT	1 cut(s)	562
SfaNI	GCATC	5 cut(s)	936, 1025, 1332, 1427, 1453
SfcI	CTRYAG	4 cut(s)	319, 824, 858, 1280
SfuI	TTCGAA	1 cut(s)	1037
SmlI	CTYRAG	1 cut(s)	416
SmoI	CTYRAG	1 cut(s)	416
SpeI	ACTAGT	1 cut(s)	731
SphI	GCATGC	1 cut(s)	452
SsiI	CCGC	3 cut(s)	215, 720, 1391
SspMI	CTAG	6 cut(s)	141, 408, 732, 755, 890, 1320
StyD4I	CCNGG	2 cut(s)	223, 562
StyI	CCWWGG	1 cut(s)	1296
TaaI	ACNGT	4 cut(s)	97, 179, 1110, 1225
TaiI	ACGT	1 cut(s)	1292
TaqI	TCGA	2 cut(s)	27, 1037
TatI	WGTACW	2 cut(s)	985, 1110
TauI	GCSGC	1 cut(s)	1393
TfiI	GAWTC	4 cut(s)	269, 339, 536, 1382
Tru1I	TTAA	8 cut(s)	114, 309, 384, 417, 518, 759, 1167, 1326
Tru9I	TTAA	8 cut(s)	114, 309, 384, 417, 518, 759, 1167, 1326
TscAI	CASTG	3 cut(s)	328, 1096, 1230
TseI	GCWGC	5 cut(s)	156, 404, 826, 857, 1027
TspDTI	ATGAA	8 cut(s)	33, 186, 241, 261, 331, 620, 734, 1374
TspGWI	ACGGA	1 cut(s)	1465
TspRI	CASTG	3 cut(s)	328, 1096, 1230
Vha464I	CTTAAG	1 cut(s)	416
VspI	ATTAAT	1 cut(s)	518
XapI	RAATTY	2 cut(s)	289, 1301
XceI	RCATGY	1 cut(s)	452
XmiI	GTMKAC	2 cut(s)	439, 1427
XmnI	GAANNNNTTC	2 cut(s)	1043, 1245
XspI	CTAG	6 cut(s)	141, 408, 732, 755, 890, 1320
Zsp2I	ATGCAT	2 cut(s)	573, 1567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.