Rmu_co8395409.1_g000001

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8395409.1
Physical Location & Seq
Reverse (-)
1 .. 1000
1000 bp
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UTR
Exon/CDS
Intron
Rmu_co8395409.1_g000001.1.cds

Sequence Viewer

Length: 270 bp
atgactggtgatggtgttaatgatgcacctgcactaaagaaggcagacattggaattgccatgggttcaggaacagctgttgccaagagtgcttcagatatggttttggctgatgacaattttgccactattgttgcggctgttgcagagggaagggcaatttacaataacacaaaacaattcatcagatatatgatctcttcaaatattggtgaagttgtttgtatatttgtggcagctgtacttggaatacctgatacactggcccct

Protein Analysis

90

Amino Acids

9.19

Weight (kDa)

4.47

Isoelectric Point (pI)

15.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018490)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 37
Acc36I ACCTGC 1 cut(s) 37
AciI CCGC 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 78
AfaI GTAC 1 cut(s) 243
AgsI TTSAA 1 cut(s) 204
AluBI AGCT 2 cut(s) 77, 239
AluI AGCT 2 cut(s) 77, 239
AoxI GGCC 1 cut(s) 264
ApeKI GCWGC 1 cut(s) 236
AspS9I GGNCC 1 cut(s) 265
AsuHPI GGTGA 2 cut(s) 20, 224
BbvI GCAGC 1 cut(s) 248
BccI CCATC 1 cut(s) 5
BfuAI ACCTGC 1 cut(s) 37
BisI GCNGC 2 cut(s) 138, 237
BlsI GCNGC 2 cut(s) 139, 238
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 1 cut(s) 267
BmsI GCATC 1 cut(s) 13
BsaJI CCNNGG 1 cut(s) 60
Bse1I ACTGG 2 cut(s) 10, 267
BseDI CCNNGG 1 cut(s) 60
BseNI ACTGG 2 cut(s) 10, 267
BseXI GCAGC 1 cut(s) 248
BsgI GTGCAG 1 cut(s) 15
BshFI GGCC 1 cut(s) 266
BsnI GGCC 1 cut(s) 266
Bsp143I GATC 1 cut(s) 195
Bsp19I CCATGG 1 cut(s) 60
BspACI CCGC 1 cut(s) 137
BspANI GGCC 1 cut(s) 266
BspLI GGNNCC 1 cut(s) 267
BspMI ACCTGC 1 cut(s) 37
BsrI ACTGG 2 cut(s) 10, 267
BssECI CCNNGG 1 cut(s) 60
BssMI GATC 1 cut(s) 195
BssT1I CCWWGG 1 cut(s) 60
Bst6I CTCTTC 1 cut(s) 205
BstDSI CCRYGG 1 cut(s) 60
BstKTI GATC 1 cut(s) 198
BstMBI GATC 1 cut(s) 195
BstMWI GCNNNNNNNGC 2 cut(s) 89, 143
BstV1I GCAGC 1 cut(s) 248
BsuRI GGCC 1 cut(s) 266
BtgI CCRYGG 1 cut(s) 60
BtsIMutI CAGTG 1 cut(s) 260
BveI ACCTGC 1 cut(s) 37
Cfr13I GGNCC 1 cut(s) 265
Csp6I GTAC 1 cut(s) 242
CspCI CAANNNNNGTGG 2 cut(s) 115, 150
CviAII CATG 1 cut(s) 61
CviJI RGCY 5 cut(s) 77, 110, 140, 239, 266
CviKI_1 RGCY 5 cut(s) 77, 110, 140, 239, 266
CviQI GTAC 1 cut(s) 242
DpnI GATC 1 cut(s) 197
DpnII GATC 1 cut(s) 195
Eam1104I CTCTTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 60
Eco57I CTGAAG 1 cut(s) 78
EcoT14I CCWWGG 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 60
FaeI CATG 1 cut(s) 64
FaiI YATR 5 cut(s) 62, 101, 192, 194, 227
FatI CATG 1 cut(s) 60
Fnu4HI GCNGC 2 cut(s) 138, 237
Fsp4HI GCNGC 2 cut(s) 138, 237
GluI GCNGC 2 cut(s) 138, 237
HaeIII GGCC 1 cut(s) 266
Hin1II CATG 1 cut(s) 64
HphI GGTGA 2 cut(s) 20, 224
Hpy188I TCNGA 2 cut(s) 97, 188
Hpy188III TCNNGA 1 cut(s) 69
HpyAV CCTTC 2 cut(s) 34, 147
HpyCH4V TGCA 3 cut(s) 26, 32, 146
HpyF10VI GCNNNNNNNGC 2 cut(s) 89, 143
Hsp92II CATG 1 cut(s) 64
Kzo9I GATC 1 cut(s) 195
LpnPI CCDG 3 cut(s) 42, 54, 248
Lsp1109I GCAGC 1 cut(s) 248
LweI GCATC 1 cut(s) 13
MalI GATC 1 cut(s) 197
MboI GATC 1 cut(s) 195
MboII GAAGA 1 cut(s) 192
MluCI AATT 4 cut(s) 54, 118, 159, 179
MnlI CCTC 1 cut(s) 142
MseI TTAA 1 cut(s) 18
MspA1I CMGCKG 2 cut(s) 77, 239
MwoI GCNNNNNNNGC 2 cut(s) 89, 143
NcoI CCATGG 1 cut(s) 60
NdeII GATC 1 cut(s) 195
NlaIII CATG 1 cut(s) 64
NlaIV GGNNCC 1 cut(s) 267
PaqCI CACCTGC 1 cut(s) 37
PkrI GCNGC 2 cut(s) 139, 238
PspN4I GGNNCC 1 cut(s) 267
PspPI GGNCC 1 cut(s) 265
PvuII CAGCTG 2 cut(s) 77, 239
RsaI GTAC 1 cut(s) 243
RsaNI GTAC 1 cut(s) 242
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 2 cut(s) 138, 237
Sau3AI GATC 1 cut(s) 195
Sau96I GGNCC 1 cut(s) 265
SetI ASST 4 cut(s) 31, 79, 241, 256
SfaNI GCATC 1 cut(s) 13
SgeI CNNG 7 cut(s) 18, 41, 73, 81, 97, 257, 266
Sse9I AATT 4 cut(s) 54, 118, 159, 179
SsiI CCGC 1 cut(s) 137
SspI AATATT 1 cut(s) 208
StyI CCWWGG 1 cut(s) 60
TasI AATT 4 cut(s) 54, 118, 159, 179
TatI WGTACW 1 cut(s) 241
TauI GCSGC 1 cut(s) 140
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TscAI CASTG 1 cut(s) 267
TseI GCWGC 1 cut(s) 236
TspDTI ATGAA 1 cut(s) 172
TspRI CASTG 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.