RNA exonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G15080 |
| fragaria_vesca | FvH4_3g19101 FvH4_3g19101 FvH4_3g19102 |
| malus_domestica | MD03G1236600.v1.1 |
| prunus_persica | Prupe.4G172700_v2.0.a1 |
| pyrus_communis | pycom03g18260 |
| rosa_chinensis | RchiOBHm_Chr5g0031901 |
| rosa_laevigata | RLG00000033357 |
| rosa_multiflora | Rmu_co8498065.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00048360 |
| rosa_rugosa | Rorug05G0128900 Rorug05G0129000 |
| rosa_samantha | Rh5AG223000 Rh5BG223100 Rh5CG246300 Rh5DG228000 |
| rosa_wichuraiana | Rw5G020310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfeI | AGCGCT | 1 cut(s) | 134 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 114, 203 |
| AgsI | TTSAA | 3 cut(s) | 100, 168, 246 |
| AluBI | AGCT | 2 cut(s) | 46, 88 |
| AluI | AGCT | 2 cut(s) | 46, 88 |
| Alw21I | GWGCWC | 1 cut(s) | 48 |
| Alw26I | GTCTC | 1 cut(s) | 242 |
| Aor51HI | AGCGCT | 1 cut(s) | 134 |
| AspLEI | GCGC | 1 cut(s) | 135 |
| BaeGI | GKGCMC | 2 cut(s) | 8, 342 |
| BanII | GRGCYC | 2 cut(s) | 48, 120 |
| Bbv12I | GWGCWC | 1 cut(s) | 48 |
| BccI | CCATC | 1 cut(s) | 205 |
| BcoDI | GTCTC | 1 cut(s) | 242 |
| BfaI | CTAG | 2 cut(s) | 253, 325 |
| BfoI | RGCGCY | 1 cut(s) | 136 |
| BmrI | ACTGGG | 1 cut(s) | 123 |
| BmuI | ACTGGG | 1 cut(s) | 123 |
| BpuEI | CTTGAG | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 2 cut(s) | 296, 342 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 114, 203 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| BseDI | CCNNGG | 2 cut(s) | 296, 342 |
| BseGI | GGATG | 1 cut(s) | 231 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 114, 203 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BseSI | GKGCMC | 2 cut(s) | 8, 342 |
| BsiHKAI | GWGCWC | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 114, 203 |
| BsmAI | GTCTC | 1 cut(s) | 242 |
| BsmBI | CGTCTC | 1 cut(s) | 242 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 48, 120, 342 |
| Bsp19I | CCATGG | 1 cut(s) | 296 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| BssECI | CCNNGG | 2 cut(s) | 296, 342 |
| BssT1I | CCWWGG | 2 cut(s) | 296, 342 |
| Bst4CI | ACNGT | 2 cut(s) | 18, 359 |
| BstC8I | GCNNGC | 1 cut(s) | 145 |
| BstDEI | CTNAG | 1 cut(s) | 201 |
| BstDSI | CCRYGG | 1 cut(s) | 296 |
| BstF5I | GGATG | 1 cut(s) | 231 |
| BstH2I | RGCGCY | 1 cut(s) | 136 |
| BstHHI | GCGC | 1 cut(s) | 135 |
| BstMAI | GTCTC | 1 cut(s) | 242 |
| BstSLI | GKGCMC | 2 cut(s) | 8, 342 |
| BtgI | CCRYGG | 1 cut(s) | 296 |
| BtsCI | GGATG | 1 cut(s) | 231 |
| BtsI | GCAGTG | 1 cut(s) | 282 |
| BtsIMutI | CAGTG | 3 cut(s) | 23, 282, 355 |
| Cac8I | GCNNGC | 1 cut(s) | 145 |
| CfoI | GCGC | 1 cut(s) | 135 |
| CviAII | CATG | 1 cut(s) | 297 |
| CviJI | RGCY | 7 cut(s) | 46, 88, 118, 143, 147, 153, 295 |
| CviKI_1 | RGCY | 7 cut(s) | 46, 88, 118, 143, 147, 153, 295 |
| DdeI | CTNAG | 1 cut(s) | 201 |
| Ecl136II | GAGCTC | 1 cut(s) | 46 |
| Eco130I | CCWWGG | 2 cut(s) | 296, 342 |
| Eco24I | GRGCYC | 2 cut(s) | 48, 120 |
| Eco47III | AGCGCT | 1 cut(s) | 134 |
| Eco53kI | GAGCTC | 1 cut(s) | 46 |
| EcoICRI | GAGCTC | 1 cut(s) | 46 |
| EcoT14I | CCWWGG | 2 cut(s) | 296, 342 |
| EcoT38I | GRGCYC | 2 cut(s) | 48, 120 |
| ErhI | CCWWGG | 2 cut(s) | 296, 342 |
| Esp3I | CGTCTC | 1 cut(s) | 242 |
| FaeI | CATG | 1 cut(s) | 300 |
| FaiI | YATR | 2 cut(s) | 298, 365 |
| FatI | CATG | 1 cut(s) | 296 |
| FokI | GGATG | 1 cut(s) | 238 |
| FriOI | GRGCYC | 2 cut(s) | 48, 120 |
| FspBI | CTAG | 2 cut(s) | 253, 325 |
| GlaI | GCGC | 1 cut(s) | 134 |
| HaeII | RGCGCY | 1 cut(s) | 136 |
| HhaI | GCGC | 1 cut(s) | 135 |
| Hin1II | CATG | 1 cut(s) | 300 |
| Hin6I | GCGC | 1 cut(s) | 133 |
| HinP1I | GCGC | 1 cut(s) | 133 |
| HinfI | GANTC | 2 cut(s) | 178, 229 |
| Hpy188I | TCNGA | 2 cut(s) | 43, 177 |
| Hpy188III | TCNNGA | 3 cut(s) | 138, 158, 253 |
| HpyAV | CCTTC | 2 cut(s) | 164, 174 |
| HpyCH4III | ACNGT | 2 cut(s) | 18, 359 |
| HpyCH4IV | ACGT | 1 cut(s) | 2 |
| HpyCH4V | TGCA | 1 cut(s) | 275 |
| HpyF3I | CTNAG | 1 cut(s) | 201 |
| HpySE526I | ACGT | 1 cut(s) | 2 |
| Hsp92II | CATG | 1 cut(s) | 300 |
| HspAI | GCGC | 1 cut(s) | 133 |
| LmnI | GCTCC | 1 cut(s) | 51 |
| LpnPI | CCDG | 5 cut(s) | 66, 99, 157, 171, 272 |
| MaeI | CTAG | 2 cut(s) | 253, 325 |
| MaeII | ACGT | 1 cut(s) | 2 |
| MaeIII | GTNAC | 2 cut(s) | 279, 351 |
| MboII | GAAGA | 5 cut(s) | 72, 75, 78, 81, 84 |
| MhlI | GDGCHC | 4 cut(s) | 8, 48, 120, 342 |
| MluCI | AATT | 1 cut(s) | 121 |
| MlyI | GAGTC | 1 cut(s) | 172 |
| MnlI | CCTC | 1 cut(s) | 18 |
| MseI | TTAA | 1 cut(s) | 263 |
| NcoI | CCATGG | 1 cut(s) | 296 |
| NlaIII | CATG | 1 cut(s) | 300 |
| NmuCI | GTSAC | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 229 |
| PleI | GAGTC | 1 cut(s) | 172 |
| PpsI | GAGTC | 1 cut(s) | 172 |
| Psp124BI | GAGCTC | 1 cut(s) | 48 |
| SacI | GAGCTC | 1 cut(s) | 48 |
| SaqAI | TTAA | 1 cut(s) | 263 |
| SchI | GAGTC | 1 cut(s) | 172 |
| SduI | GDGCHC | 4 cut(s) | 8, 48, 120, 342 |
| SetI | ASST | 3 cut(s) | 48, 90, 261 |
| SmlI | CTYRAG | 1 cut(s) | 136 |
| SmoI | CTYRAG | 1 cut(s) | 136 |
| Sse9I | AATT | 1 cut(s) | 121 |
| SspMI | CTAG | 2 cut(s) | 253, 325 |
| SstI | GAGCTC | 1 cut(s) | 48 |
| StyI | CCWWGG | 2 cut(s) | 296, 342 |
| TaaI | ACNGT | 2 cut(s) | 18, 359 |
| TaqII | GACCGA | 1 cut(s) | 310 |
| TasI | AATT | 1 cut(s) | 121 |
| TfiI | GAWTC | 1 cut(s) | 229 |
| Tru1I | TTAA | 1 cut(s) | 263 |
| Tru9I | TTAA | 1 cut(s) | 263 |
| TscAI | CASTG | 3 cut(s) | 23, 282, 362 |
| TseFI | GTSAC | 1 cut(s) | 279 |
| Tsp45I | GTSAC | 1 cut(s) | 279 |
| TspDTI | ATGAA | 2 cut(s) | 91, 302 |
| TspGWI | ACGGA | 2 cut(s) | 224, 225 |
| TspRI | CASTG | 3 cut(s) | 23, 282, 362 |
| XbaI | TCTAGA | 1 cut(s) | 252 |
| XspI | CTAG | 2 cut(s) | 253, 325 |