Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000035.1

Orthogroup ID

OG0007795

Physical Location & Seq

Genomic Coordinates Forward (+)

105938 .. 108929

Gene Structure 2992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

atgctggtctgccttctaaatggaggagccctctccacctccggctgtccaagcccagccttccaatgctggaatttcccgacaatcacctttcaaagccaagaggttgaaactttcatggtttttttttcttgccaaaataagtacgattcggatcaattgttagagttcggtggtctgcggcccaaacggggatggctgaaactgtacttgtggctcaagttatcgatggagagattgaacatggaggcgatgctctatagctcggggacgcaaccttcattatggaggtcaatctcgatccggcatgatttaggctcaatcattcatctccgaatggcggagtatttagggcgtgaacctagttactgtgagataggagcagtacaagatttggcggtgctacatctaggtgtgacgactatggtgtctatcgacaaagcaagggccgatgtggatggtgttgcgtggcacaagggggtgcctagagcttgggtgtccaaagcaaagttgagggttgcccgtgttagattggaccccgggcccaattggagttgggtgtttagcgtagcgggtgatgcgcggatggcagaagaatacgacgtcgtagaagtagcttggctccgagagtatattcccagtctgtggattggtagggcaagtcctgcaatggagaatagtaataatatgatgacggaaccagtgatgattttggatttaaaccaacaacctgtagagcaacctcatgattcggtcactggcttacactccatactgaatgagctagaatccgcccaaggacgcattgaagagcgtatcagacagctcgaagcggtcaccgctaggcagcgtcagaggtggaggcaagctcttgtttcccctcaagttgtgaatatcactccgccgcctgctgatacgccaaatgaacgacacattcacagtcgggatgatgatgctcttgccaatgccgcgagagaaagagagacaacaatagagactgggaaaaccaacacaactgagagtacccatttgatagccaaggcactcgcgatggatacaaatcctaagagggtagagcctcgtattgggagcttcttcgactgtaatatatgcttggacatggcaacagatcctatattaacatgctgcggtcatttgttttgttggccatgcttttatcagttgtcttatgctgattccaatgcaaaggaatgccctgtgtgcaaaggagaagtgactgatgcaagtataattccagtttacgggcatggtgatggtaacagttctcaaaagtcaaaggaatttgtttccgaggcccctcctaggccccgtgcagccaggattgagggtgtgaggcagcagctcattaggcgagggccatcttccgtaattgaacacaggattcagctacttgttggtgcattgggggagagaagacagacacaggatttttttggttctcatttcaatgcaatggctgaaagaactagtttctttaccagccggtatccatcacctgccaccgaaacatcaagcacccagcaccatgattcacttcaagtttcaagattattgatgcaaagagctgcttcagtttcttccctttcatcagcactgaatactgcaatggattctgcagaaagattagatgaggatcacgaggcatatagtaatgatccccgcatgagaagaaaccaccagcaatctccaagtaatgattatggagttacatcttcaaatattgctacaattatacaaccagaaaacctgacgtctgatacagctgccgaaatcaattcagatgtgcgtccagctgcgtcctttttaaggagttttcctgctagtgcgggcttggaagacgagacagtgaattcagaaatagattcaacatttcgatcttcatcttcaaggagaagaagtagttttcagagaggctctggtgtgaataataatcagcattcatctgaacccagaaggagaaggttgagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006515 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0019538 GO:0019899 GO:0030163 GO:0031984 GO:0032991 GO:0033554 GO:0034976 GO:0035966 GO:0035967 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051603 GO:0051716 GO:0051788 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

zf-C3HC4_3 zf-RING_5

Protein Analysis

663

Amino Acids

74.25

Weight (kDa)

6.34

Isoelectric Point (pI)

61.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_5	PF14634	367 - 409	1.4e-07	zinc-RING finger domain
zf-C3HC4_3	PF13920	368 - 414	5e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	368 - 406	5.9e-07	RING-type zinc-finger
zf-C3HC4_2	PF13923	368 - 408	1.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	368 - 408	3.8e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44410
fragaria_vesca	FvH4_7g00150 FvH4_7g00150 FvH4_7g00150
malus_domestica	MD02G1318800.v1.1 MD07G1002400.v1.1
prunus_persica	Prupe.2G003800_v2.0.a1 Prupe.2G003800_v2.0.a1 Prupe.2G003800_v2.0.a1
pyrus_communis	pycom02g26710 pycom07g00240
rosa_chinensis	RchiOBHm_Chr1g0313401
rosa_laevigata	RLG00000030800
rosa_multiflora	Rmu_sc0000035.1_g000030 Rmu_sc0000035.1_g000044
rosa_roxburghii	Rroxscaffold_4G00332220
rosa_rugosa	RorugPtG0004700.1
rosa_samantha	Rh1AG003200 Rh1BG000200 Rh1CG001400 Rh1CG007600 Rh1DG002700 Rh1DG003100
rosa_wichuraiana	Rw1G000200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1525
AasI	GACNNNNNNGTC	1 cut(s)	427
AatII	GACGTC	2 cut(s)	606, 1775
Acc36I	ACCTGC	1 cut(s)	1525
AccB1I	GGYRCC	1 cut(s)	481
AccB7I	CCANNNNNTGG	1 cut(s)	645
AccII	CGCG	3 cut(s)	583, 971, 1049
AclWI	GGATC	5 cut(s)	162, 295, 1124, 1662, 1670
AcoI	YGGCCR	1 cut(s)	1166
AcsI	RAATTY	3 cut(s)	73, 1301, 1870
AcuI	CTGAAG	1 cut(s)	1575
AcyI	GRCGYC	2 cut(s)	603, 1772
AfaI	GTAC	4 cut(s)	146, 209, 387, 1024
AfiI	CCNNNNNNNGG	7 cut(s)	191, 340, 645, 1085, 1262, 1323, 1827
AhlI	ACTAGT	1 cut(s)	1487
AjnI	CCWGG	1 cut(s)	1337
Alw26I	GTCTC	3 cut(s)	977, 989, 1856
AlwI	GGATC	5 cut(s)	162, 295, 1124, 1662, 1670
Ama87I	CYCGRG	2 cut(s)	265, 539
AoxI	GGCC	7 cut(s)	182, 447, 542, 1166, 1314, 1325, 1376
ApaI	GGGCCC	1 cut(s)	546
ApeKI	GCWGC	8 cut(s)	847, 1146, 1334, 1357, 1360, 1586, 1784, 1814
ApoI	RAATTY	3 cut(s)	73, 1301, 1870
AspA2I	CCTAGG	1 cut(s)	1322
AspLEI	GCGC	1 cut(s)	583
AspS9I	GGNCC	8 cut(s)	183, 447, 535, 542, 543, 1315, 1326, 1376
AsuC2I	CCSGG	2 cut(s)	540, 541
AsuHPI	GGTGA	5 cut(s)	79, 587, 829, 1283, 1506
AvaI	CYCGRG	2 cut(s)	265, 539
AvaII	GGWCC	1 cut(s)	535
AvrII	CCTAGG	1 cut(s)	1322
BaeGI	GKGCMC	1 cut(s)	546
BalI	TGGCCA	1 cut(s)	1168
BanI	GGYRCC	1 cut(s)	481
BanII	GRGCYC	2 cut(s)	31, 546
BauI	CACGAG	1 cut(s)	1658
BbsI	GAAGAC	2 cut(s)	1441, 1863
BbvI	GCAGC	8 cut(s)	859, 1133, 1346, 1369, 1372, 1573, 1771, 1801
BccI	CCATC	8 cut(s)	189, 223, 452, 580, 1045, 1268, 1387, 1519
BciT130I	CCWGG	1 cut(s)	1339
BciVI	GTATCC	2 cut(s)	1048, 1518
BcnI	CCSGG	2 cut(s)	540, 541
BcoDI	GTCTC	3 cut(s)	977, 989, 1856
BcuI	ACTAGT	1 cut(s)	1487
BfaI	CTAG	8 cut(s)	363, 410, 486, 785, 843, 1323, 1488, 1842
BfmI	CTRYAG	3 cut(s)	259, 732, 1635
BfuAI	ACCTGC	1 cut(s)	1525
BfuI	GTATCC	2 cut(s)	1048, 1518
BlnI	CCTAGG	1 cut(s)	1322
Bme1390I	CCNGG	3 cut(s)	540, 541, 1339
Bme18I	GGWCC	1 cut(s)	535
BmeT110I	CYCGRG	2 cut(s)	265, 539
BmgT120I	GGNCC	8 cut(s)	183, 447, 535, 542, 543, 1315, 1326, 1376
BmiI	GGNNCC	8 cut(s)	28, 483, 537, 544, 623, 699, 1317, 1328
BmrFI	CCNGG	3 cut(s)	540, 541, 1339
BmrI	ACTGGG	2 cut(s)	633, 1008
BmsI	GCATC	5 cut(s)	243, 568, 943, 1231, 1566
BmuI	ACTGGG	2 cut(s)	633, 1008
BpiI	GAAGAC	2 cut(s)	1441, 1863
BplI	GAGNNNNNCTC	4 cut(s)	15, 47, 853, 885
BpuEI	CTTGAG	2 cut(s)	203, 867
BpuMI	CCSGG	2 cut(s)	540, 541
Bsa29I	ATCGAT	1 cut(s)	227
BsaBI	GATNNNNATC	4 cut(s)	153, 1059, 1653, 1900
BsaHI	GRCGYC	2 cut(s)	603, 1772
BsaJI	CCNNGG	6 cut(s)	538, 539, 796, 1038, 1311, 1322
BsaXI	ACNNNNNCTCC	2 cut(s)	1903, 1933
Bsc4I	CCNNNNNNNGG	7 cut(s)	191, 340, 645, 1085, 1262, 1323, 1827
Bse118I	RCCGGY	1 cut(s)	1503
Bse1I	ACTGG	5 cut(s)	639, 701, 763, 1003, 1256
Bse3DI	GCAATG	3 cut(s)	675, 1479, 1632
Bse8I	GATNNNNATC	4 cut(s)	153, 1059, 1653, 1900
BseBI	CCWGG	1 cut(s)	1339
BseCI	ATCGAT	1 cut(s)	227
BseDI	CCNNGG	6 cut(s)	538, 539, 796, 1038, 1311, 1322
BseGI	GGATG	4 cut(s)	200, 463, 591, 952
BseJI	GATNNNNATC	4 cut(s)	153, 1059, 1653, 1900
BseLI	CCNNNNNNNGG	7 cut(s)	191, 340, 645, 1085, 1262, 1323, 1827
BseMI	GCAATG	3 cut(s)	675, 1479, 1632
BseMII	CTCAG	1 cut(s)	1008
BseNI	ACTGG	5 cut(s)	639, 701, 763, 1003, 1256
BseRI	GAGGAG	1 cut(s)	39
BseSI	GKGCMC	1 cut(s)	546
BseXI	GCAGC	8 cut(s)	859, 1133, 1346, 1369, 1372, 1573, 1771, 1801
BseYI	CCCAGC	2 cut(s)	55, 1539
BsgI	GTGCAG	1 cut(s)	1353
Bsh1236I	CGCG	3 cut(s)	583, 971, 1049
BshFI	GGCC	7 cut(s)	184, 449, 544, 1168, 1316, 1327, 1378
BshNI	GGYRCC	1 cut(s)	481
BshVI	ATCGAT	1 cut(s)	227
BsiHKCI	CYCGRG	2 cut(s)	265, 539
BsiSI	CCGG	4 cut(s)	42, 304, 540, 1504
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	7 cut(s)	191, 340, 645, 1085, 1262, 1323, 1827
BsmAI	GTCTC	3 cut(s)	977, 989, 1856
BsmFI	GGGAC	1 cut(s)	283
BsmI	GAATGC	2 cut(s)	1217, 1957
BsnI	GGCC	7 cut(s)	184, 449, 544, 1168, 1316, 1327, 1378
BsoBI	CYCGRG	2 cut(s)	265, 539
Bsp120I	GGGCCC	1 cut(s)	542
Bsp1286I	GDGCHC	2 cut(s)	31, 546
Bsp143I	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
Bsp68I	TCGCGA	1 cut(s)	1049
BspANI	GGCC	7 cut(s)	184, 449, 544, 1168, 1316, 1327, 1378
BspCNI	CTCAG	1 cut(s)	1009
BspDI	ATCGAT	1 cut(s)	227
BspFNI	CGCG	3 cut(s)	583, 971, 1049
BspHI	TCATGA	1 cut(s)	745
BspLI	GGNNCC	8 cut(s)	28, 483, 537, 544, 623, 699, 1317, 1328
BspMAI	CTGCAG	1 cut(s)	1639
BspMI	ACCTGC	1 cut(s)	1525
BspPI	GGATC	5 cut(s)	162, 295, 1124, 1662, 1670
BspQI	GCTCTTC	1 cut(s)	804
BspT107I	GGYRCC	1 cut(s)	481
BsrDI	GCAATG	3 cut(s)	675, 1479, 1632
BsrFI	RCCGGY	1 cut(s)	1503
BsrI	ACTGG	5 cut(s)	639, 701, 763, 1003, 1256
BssAI	RCCGGY	1 cut(s)	1503
BssECI	CCNNGG	6 cut(s)	538, 539, 796, 1038, 1311, 1322
BssMI	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
BssNI	GRCGYC	2 cut(s)	603, 1772
BssSI	CACGAG	1 cut(s)	1658
BssT1I	CCWWGG	3 cut(s)	796, 1038, 1322
Bst2BI	CACGAG	1 cut(s)	1658
Bst2UI	CCWGG	1 cut(s)	1339
Bst4CI	ACNGT	6 cut(s)	207, 371, 941, 1103, 1283, 1867
Bst6I	CTCTTC	1 cut(s)	804
BstACI	GRCGYC	2 cut(s)	603, 1772
BstAPI	GCANNNNNTGC	1 cut(s)	665
BstC8I	GCNNGC	3 cut(s)	867, 909, 1849
BstDEI	CTNAG	2 cut(s)	1017, 1065
BstEII	GGTNACC	1 cut(s)	835
BstENI	CCTNNNNNAGG	1 cut(s)	1825
BstF5I	GGATG	4 cut(s)	200, 463, 591, 952
BstFNI	CGCG	3 cut(s)	583, 971, 1049
BstHHI	GCGC	1 cut(s)	583
BstKTI	GATC	6 cut(s)	157, 303, 1132, 1657, 1678, 1898
BstMAI	GTCTC	3 cut(s)	977, 989, 1856
BstMBI	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
BstMWI	GCNNNNNNNGC	8 cut(s)	51, 578, 587, 665, 839, 968, 1221, 1369
BstNI	CCWGG	1 cut(s)	1339
BstNSI	RCATGY	1 cut(s)	1146
BstPI	GGTNACC	1 cut(s)	835
BstSCI	CCNGG	3 cut(s)	538, 539, 1337
BstSFI	CTRYAG	3 cut(s)	259, 732, 1635
BstSLI	GKGCMC	1 cut(s)	546
BstUI	CGCG	3 cut(s)	583, 971, 1049
BstV1I	GCAGC	8 cut(s)	859, 1133, 1346, 1369, 1372, 1573, 1771, 1801
BstV2I	GAAGAC	2 cut(s)	1441, 1863
BstX2I	RGATCY	1 cut(s)	1129
BstYI	RGATCY	1 cut(s)	1129
Bsu15I	ATCGAT	1 cut(s)	227
BsuI	GTATCC	2 cut(s)	1048, 1518
BsuRI	GGCC	7 cut(s)	184, 449, 544, 1168, 1316, 1327, 1378
BsuTUI	ATCGAT	1 cut(s)	227
BtgZI	GCGATG	2 cut(s)	266, 1064
BtsCI	GGATG	4 cut(s)	200, 463, 591, 952
BtsIMutI	CAGTG	4 cut(s)	708, 756, 1613, 1872
BtuMI	TCGCGA	1 cut(s)	1049
BveI	ACCTGC	1 cut(s)	1525
Cac8I	GCNNGC	3 cut(s)	867, 909, 1849
CciI	TCATGA	1 cut(s)	745
CfoI	GCGC	1 cut(s)	583
Cfr10I	RCCGGY	1 cut(s)	1503
Cfr13I	GGNCC	8 cut(s)	183, 447, 535, 542, 543, 1315, 1326, 1376
Cfr9I	CCCGGG	1 cut(s)	539
ClaI	ATCGAT	1 cut(s)	227
CseI	GACGC	5 cut(s)	280, 810, 839, 1796, 1806
Csp6I	GTAC	4 cut(s)	145, 208, 386, 1023
CviQI	GTAC	4 cut(s)	145, 208, 386, 1023
DdeI	CTNAG	2 cut(s)	1017, 1065
DpnI	GATC	6 cut(s)	156, 302, 1131, 1656, 1677, 1897
DpnII	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
DraI	TTTAAA	1 cut(s)	720
DrdI	GACNNNNNNGTC	1 cut(s)	427
DseDI	GACNNNNNNGTC	1 cut(s)	427
EaeI	YGGCCR	1 cut(s)	1166
Eam1104I	CTCTTC	1 cut(s)	804
EarI	CTCTTC	1 cut(s)	804
EciI	GGCGGA	3 cut(s)	356, 781, 891
Eco130I	CCWWGG	3 cut(s)	796, 1038, 1322
Eco24I	GRGCYC	2 cut(s)	31, 546
Eco47I	GGWCC	1 cut(s)	535
Eco57I	CTGAAG	1 cut(s)	1575
Eco88I	CYCGRG	2 cut(s)	265, 539
Eco91I	GGTNACC	1 cut(s)	835
EcoNI	CCTNNNNNAGG	1 cut(s)	1825
EcoO109I	RGGNCCY	2 cut(s)	1315, 1326
EcoO65I	GGTNACC	1 cut(s)	835
EcoRI	GAATTC	1 cut(s)	1870
EcoRII	CCWGG	1 cut(s)	1337
EcoT14I	CCWWGG	3 cut(s)	796, 1038, 1322
EcoT38I	GRGCYC	2 cut(s)	31, 546
ErhI	CCWWGG	3 cut(s)	796, 1038, 1322
FalI	AAGNNNNNCTT	2 cut(s)	1573, 1605
FaqI	GGGAC	1 cut(s)	283
FauI	CCCGC	3 cut(s)	565, 1688, 1840
FokI	GGATG	4 cut(s)	207, 470, 598, 959
FriOI	GRGCYC	2 cut(s)	31, 546
FspBI	CTAG	8 cut(s)	363, 410, 486, 785, 843, 1323, 1488, 1842
GlaI	GCGC	1 cut(s)	582
GsaI	CCCAGC	2 cut(s)	59, 1543
HaeIII	GGCC	7 cut(s)	184, 449, 544, 1168, 1316, 1327, 1378
HapII	CCGG	4 cut(s)	42, 304, 540, 1504
HgaI	GACGC	5 cut(s)	280, 810, 839, 1796, 1806
HhaI	GCGC	1 cut(s)	583
Hin1I	GRCGYC	2 cut(s)	603, 1772
Hin6I	GCGC	1 cut(s)	581
HinP1I	GCGC	1 cut(s)	581
HinfI	GANTC	8 cut(s)	149, 749, 788, 1196, 1402, 1550, 1631, 1883
HpaII	CCGG	4 cut(s)	42, 304, 540, 1504
HphI	GGTGA	5 cut(s)	79, 587, 829, 1283, 1506
Hpy166II	GTNNAC	2 cut(s)	359, 1261
Hpy188III	TCNNGA	7 cut(s)	79, 298, 746, 944, 1048, 1566, 1658
Hpy8I	GTNNAC	2 cut(s)	359, 1261
Hpy99I	CGWCG	2 cut(s)	605, 608
HpyAV	CCTTC	5 cut(s)	23, 70, 288, 1968, 1974
HpyCH4III	ACNGT	6 cut(s)	207, 371, 941, 1103, 1283, 1867
HpyCH4IV	ACGT	2 cut(s)	603, 1772
HpyF10VI	GCNNNNNNNGC	8 cut(s)	51, 578, 587, 665, 839, 968, 1221, 1369
HpyF3I	CTNAG	2 cut(s)	1017, 1065
HpySE526I	ACGT	2 cut(s)	603, 1772
Hsp92I	GRCGYC	2 cut(s)	603, 1772
HspAI	GCGC	1 cut(s)	581
Kzo9I	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
LguI	GCTCTTC	1 cut(s)	804
LmnI	GCTCC	4 cut(s)	26, 380, 627, 1089
Lsp1109I	GCAGC	8 cut(s)	859, 1133, 1346, 1369, 1372, 1573, 1771, 1801
LweI	GCATC	5 cut(s)	243, 568, 943, 1231, 1566
MaeI	CTAG	8 cut(s)	363, 410, 486, 785, 843, 1323, 1488, 1842
MaeII	ACGT	2 cut(s)	603, 1772
MaeIII	GTNAC	7 cut(s)	365, 415, 754, 835, 1234, 1277, 1726
MalI	GATC	6 cut(s)	156, 302, 1131, 1656, 1677, 1897
MboI	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
MfeI	CAATTG	2 cut(s)	158, 547
MflI	RGATCY	1 cut(s)	1129
MhlI	GDGCHC	2 cut(s)	31, 546
MlsI	TGGCCA	1 cut(s)	1168
MluCI	AATT	9 cut(s)	73, 158, 547, 1251, 1301, 1389, 1749, 1795, 1870
MluNI	TGGCCA	1 cut(s)	1168
Mox20I	TGGCCA	1 cut(s)	1168
MscI	TGGCCA	1 cut(s)	1168
MseI	TTAA	3 cut(s)	719, 1139, 1826
MslI	CAYNNNNRTG	3 cut(s)	411, 1272, 1467
Msp20I	TGGCCA	1 cut(s)	1168
MspA1I	CMGCKG	2 cut(s)	1784, 1814
MspI	CCGG	4 cut(s)	42, 304, 540, 1504
MspR9I	CCNGG	3 cut(s)	540, 541, 1339
MunI	CAATTG	2 cut(s)	158, 547
Mva1269I	GAATGC	2 cut(s)	1217, 1957
MvaI	CCWGG	1 cut(s)	1339
MvnI	CGCG	3 cut(s)	583, 971, 1049
MwoI	GCNNNNNNNGC	8 cut(s)	51, 578, 587, 665, 839, 968, 1221, 1369
NciI	CCSGG	2 cut(s)	540, 541
NdeII	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
NlaIV	GGNNCC	8 cut(s)	28, 483, 537, 544, 623, 699, 1317, 1328
NmuCI	GTSAC	4 cut(s)	415, 754, 835, 1234
NruI	TCGCGA	1 cut(s)	1049
NspI	RCATGY	1 cut(s)	1146
PagI	TCATGA	1 cut(s)	745
PaqCI	CACCTGC	1 cut(s)	1525
PciSI	GCTCTTC	1 cut(s)	804
PctI	GAATGC	2 cut(s)	1217, 1957
PfeI	GAWTC	8 cut(s)	149, 749, 788, 1196, 1402, 1550, 1631, 1883
PflMI	CCANNNNNTGG	1 cut(s)	645
Psp6I	CCWGG	1 cut(s)	1337
PspEI	GGTNACC	1 cut(s)	835
PspFI	CCCAGC	2 cut(s)	55, 1539
PspGI	CCWGG	1 cut(s)	1337
PspN4I	GGNNCC	8 cut(s)	28, 483, 537, 544, 623, 699, 1317, 1328
PspOMI	GGGCCC	1 cut(s)	542
PspPI	GGNCC	8 cut(s)	183, 447, 535, 542, 543, 1315, 1326, 1376
PstI	CTGCAG	1 cut(s)	1639
PsuI	RGATCY	1 cut(s)	1129
PvuII	CAGCTG	2 cut(s)	1784, 1814
RruI	TCGCGA	1 cut(s)	1049
RsaI	GTAC	4 cut(s)	146, 209, 387, 1024
RsaNI	GTAC	4 cut(s)	145, 208, 386, 1023
RseI	CAYNNNNRTG	3 cut(s)	411, 1272, 1467
SapI	GCTCTTC	1 cut(s)	804
SaqAI	TTAA	3 cut(s)	719, 1139, 1826
Sau3AI	GATC	6 cut(s)	154, 300, 1129, 1654, 1675, 1895
Sau96I	GGNCC	8 cut(s)	183, 447, 535, 542, 543, 1315, 1326, 1376
ScrFI	CCNGG	3 cut(s)	540, 541, 1339
SduI	GDGCHC	2 cut(s)	31, 546
SfaNI	GCATC	5 cut(s)	243, 568, 943, 1231, 1566
SfcI	CTRYAG	3 cut(s)	259, 732, 1635
SinI	GGWCC	1 cut(s)	535
SmaI	CCCGGG	1 cut(s)	541
SmiMI	CAYNNNNRTG	3 cut(s)	411, 1272, 1467
SmlI	CTYRAG	2 cut(s)	218, 882
SmoI	CTYRAG	2 cut(s)	218, 882
SpeI	ACTAGT	1 cut(s)	1487
Sse9I	AATT	9 cut(s)	73, 158, 547, 1251, 1301, 1389, 1749, 1795, 1870
SspI	AATATT	1 cut(s)	1741
SspMI	CTAG	8 cut(s)	363, 410, 486, 785, 843, 1323, 1488, 1842
StyD4I	CCNGG	3 cut(s)	538, 539, 1337
StyI	CCWWGG	3 cut(s)	796, 1038, 1322
TaaI	ACNGT	6 cut(s)	207, 371, 941, 1103, 1283, 1867
TaiI	ACGT	2 cut(s)	606, 1775
TaqI	TCGA	6 cut(s)	227, 299, 435, 828, 1098, 1894
TaqII	GACCGA	1 cut(s)	742
TasI	AATT	9 cut(s)	73, 158, 547, 1251, 1301, 1389, 1749, 1795, 1870
TatI	WGTACW	2 cut(s)	207, 385
TauI	GCSGC	3 cut(s)	184, 907, 971
TfiI	GAWTC	8 cut(s)	149, 749, 788, 1196, 1402, 1550, 1631, 1883
Tru1I	TTAA	3 cut(s)	719, 1139, 1826
Tru9I	TTAA	3 cut(s)	719, 1139, 1826
TscAI	CASTG	4 cut(s)	708, 763, 1620, 1872
TseFI	GTSAC	4 cut(s)	415, 754, 835, 1234
TseI	GCWGC	8 cut(s)	847, 1146, 1334, 1357, 1360, 1586, 1784, 1814
Tsp45I	GTSAC	4 cut(s)	415, 754, 835, 1234
TspDTI	ATGAA	7 cut(s)	106, 270, 317, 939, 1596, 1890, 1950
TspGWI	ACGGA	2 cut(s)	710, 1375
TspMI	CCCGGG	1 cut(s)	539
TspRI	CASTG	4 cut(s)	708, 763, 1620, 1872
Van91I	CCANNNNNTGG	1 cut(s)	645
VpaK11BI	GGWCC	1 cut(s)	535
XagI	CCTNNNNNAGG	1 cut(s)	1825
XapI	RAATTY	3 cut(s)	73, 1301, 1870
XceI	RCATGY	1 cut(s)	1146
XmaI	CCCGGG	1 cut(s)	539
XmaJI	CCTAGG	1 cut(s)	1322
XspI	CTAG	8 cut(s)	363, 410, 486, 785, 843, 1323, 1488, 1842
ZraI	GACGTC	2 cut(s)	604, 1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.