Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000157.1

Orthogroup ID

OG0012292

Physical Location & Seq

Genomic Coordinates Reverse (-)

17458 .. 23673

Gene Structure 6216 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

atgacctcaaaaacttggccgtcacggtttaaaaacggcacacccacaaagcccaccaaagaaaaaaacactcctccacaacctcccaaaacctcacagtctcacggcgtcgccttccgttcccgccgttcaccggagcatcagagccacagagttccggcgagtatggacttagatgatctcgaagggccgagcaagcctgctcgggtctccaggttcatgccccggtccaagaacgccccaccgaaaccgaaacccgaacccgccgtcaaaaaggaacctgcaaaaccggtcccaaactccgagccggaatcgccgcagctgctaaagcccaagccggaagcactcgatgacgtggcggttctcgcagtgccggagaagaaagaagagaagcaagaagaaggcgccaatggagatgattcaaatggcgccgtgaaaatggagaccgatggagaagcgaaggaggacgacgatcctatggaagaagacgacgctgaagacaccgtcgttcgtgaaattgacgtcttctttaatcctagagtcgattccaacactcagttgtacgttttgcaatatcctctgaggcctcggtggcggccgtacgagttggagaatcggtgcgaggagataagagtgaaacctgccactgctgaagtggaggtggatttgtctctagatgtttactcgaagaattgtgatcaagagtttgctgacaggctcaaaatgacaaagcagactttggctacagaatgggatccctgccgttcaactggctatgccgttggggttttgatgggcaacaagttacacttgaatcctgttcatgcagttgttcagctccgaccatcactggagcatttaaagcctggtggctcaaaaaggaagggcaaggccacaggggatgcagaagttacagttaaaagagagatttatagtgaggaaaaatcttcggctccatcaaagaaacagaacaagcgtgtggagtcctcaactgaagatgaagagagttgggttccacttgagtaccagggctcagaaagtgatttttcagctagatatttaaaaagaatggtggtacaagaaagttctcctatagaatttacaatgactccgtatgactatgttaactctttgtgtcctagaacgtgcaaaggctcttccaaaagggctctgctaaacctgcctctggaggagcgtatccagaagttgcttgttgaggaacctatagctcgccggttcagtgatcttaagaagtactatgctcctcgtaaccaggaaaaagaacttttggatgtccttcaaaagcatggtctattgctgcgtgatctctgggttccaaaaactgcattgctatatcccaagaaagagggttcgtctagaaagaaagaagatgacaatctgcgtacagctagaaattacattctaaattcattctggaagaaccctgtaattagttattcagaactaaacgtctacccacccctaaagcctcattttgacaaaaccttgaaagtcttagctgtatacagaccttcgactcgagattggaaatttaaagagcaatcagacgtgtcatttgcagaactctatccagagatttctgaaagccaggaacagatctgggaaaggatggataaacaattggtggaagcccttaagcctcaccgtgatatgaagaatgctagcatgaatagtaagattgggaaatcaccaaattctgataaaggtcctagtaaaagtgcaagtggagttcccagtggaggagtgagaaccatgtcagatgaaacccgagcagctctacctgatgccatcaaggaagttcttcagaaacacaaggtttgcaactttcagctgatatgtgatggattacgtcatttgacagtcgacagaatgcagcatccaaaagttgatcctaagagtaaaaagttaacagctgcaaggaatggccttgaggctcctccagaagagctgcagaaagtcataacacaagttgcagtgaacattcatggttcatatgtcttgatatcatcgccagaccacccagagcatgatcagttaagggatgttgtaattaaacttcttcaaggtaagaataaagggccacttaaaaagctggatgttactatagctgctaaggaggaacttgggagggaaatcagtaataatgaatatagcaaggtcatgactgaactttgtgtgtctaaaggttctcaatggtacctgaaaagtggggatggcgggccgaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko03020 ko04623 ko05169 map00230 map00240 map03020 map04623 map05169

Pfam Domains

Protein Families

Sin_N

Protein Analysis

749

Amino Acids

84.74

Weight (kDa)

8.67

Isoelectric Point (pI)

51.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPC5	PF04801	166 - 549	1.2e-87	RPC5 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49530
fragaria_vesca	FvH4_1g13700 FvH4_1g13700 FvH4_2g10200
malus_domestica	MD02G1151400.v1.1 MD15G1266000.v1.1
prunus_persica	Prupe.7G151600_v2.0.a1 Prupe.7G151600_v2.0.a1
pyrus_communis	pycom02g11880
rosa_chinensis	RchiOBHm_Chr2g0102021
rosa_laevigata	RLG00000017127
rosa_multiflora	Rmu_sc0000157.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140820
rosa_rugosa	Rorug02G0104100.1
rosa_samantha	Rh2AG152100 Rh2BG157500 Rh2CG157500 Rh2DG157600
rosa_wichuraiana	Rw2G011880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	525
Acc36I	ACCTGC	3 cut(s)	289, 649, 1188
Acc65I	GGTACC	1 cut(s)	2217
AccB1I	GGYRCC	3 cut(s)	404, 428, 2217
AccI	GTMKAC	3 cut(s)	1473, 1524, 1884
AciI	CCGC	6 cut(s)	124, 264, 317, 359, 595, 2238
AclWI	GGATC	4 cut(s)	467, 749, 762, 1904
AcoI	YGGCCR	2 cut(s)	17, 596
AcsI	RAATTY	4 cut(s)	1097, 1426, 1550, 1714
AcuI	CTGAAG	4 cut(s)	516, 672, 1014, 1808
AcyI	GRCGYC	4 cut(s)	108, 405, 429, 522
AfaI	GTAC	7 cut(s)	563, 602, 1025, 1077, 1256, 1405, 2219
AfiI	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
AflII	CTTAAG	2 cut(s)	1247, 1655
AflIII	ACRYGT	1 cut(s)	1569
AgeI	ACCGGT	1 cut(s)	289
AgsI	TTSAA	6 cut(s)	423, 768, 814, 1301, 1510, 2084
AjiI	CACGTC	2 cut(s)	355, 1570
AjnI	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
Alw26I	GTCTC	4 cut(s)	105, 214, 437, 675
AlwI	GGATC	4 cut(s)	467, 749, 762, 1904
Ama87I	CYCGRG	3 cut(s)	204, 1539, 1788
AoxI	GGCC	8 cut(s)	17, 188, 584, 596, 891, 1945, 2099, 2240
ApeKI	GCWGC	8 cut(s)	319, 322, 1318, 1793, 1894, 1934, 1969, 2129
ApoI	RAATTY	4 cut(s)	1097, 1426, 1550, 1714
ArsI	GACNNNNNNTTYG	6 cut(s)	252, 284, 1294, 1326, 1559, 1591
AsiGI	ACCGGT	1 cut(s)	289
Asp700I	GAANNNNTTC	1 cut(s)	1821
Asp718I	GGTACC	1 cut(s)	2217
AspLEI	GCGC	2 cut(s)	407, 431
AspS9I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
AsuC2I	CCSGG	1 cut(s)	226
AsuHPI	GGTGA	3 cut(s)	123, 1655, 1701
AsuNHI	GCTAGC	1 cut(s)	1682
AvaI	CYCGRG	3 cut(s)	204, 1539, 1788
AvaII	GGWCC	3 cut(s)	228, 292, 1727
BaeI	ACNNNNGTAYC	2 cut(s)	1007, 1040
BamHI	GGATCC	1 cut(s)	754
BanI	GGYRCC	3 cut(s)	404, 428, 2217
BanII	GRGCYC	2 cut(s)	1034, 1171
BarI	GAAGNNNNNNTAC	2 cut(s)	2061, 2093
BbsI	GAAGAC	3 cut(s)	492, 504, 517
BbvI	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
BccI	CCATC	8 cut(s)	443, 787, 853, 964, 1624, 1817, 1856, 2228
BceAI	ACGGC	9 cut(s)	4, 52, 111, 121, 251, 416, 583, 747, 764
BciT130I	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
BciVI	GTATCC	1 cut(s)	1208
BclI	TGATCA	2 cut(s)	697, 2050
BcnI	CCSGG	1 cut(s)	226
BcoDI	GTCTC	4 cut(s)	105, 214, 437, 675
BfaI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
BfmI	CTRYAG	5 cut(s)	744, 1092, 1224, 1970, 2124
BfoI	RGCGCY	2 cut(s)	408, 432
BfrI	CTTAAG	2 cut(s)	1247, 1655
BfuAI	ACCTGC	3 cut(s)	289, 649, 1188
BfuI	GTATCC	1 cut(s)	1208
BglI	GCCNNNNNGGC	1 cut(s)	592
BglII	AGATCT	1 cut(s)	1617
BmcAI	AGTACT	1 cut(s)	1256
Bme1390I	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
Bme18I	GGWCC	3 cut(s)	228, 292, 1727
BmeT110I	CYCGRG	3 cut(s)	204, 1539, 1788
BmgBI	CACGTC	2 cut(s)	355, 1570
BmgT120I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
BmrFI	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
BmrI	ACTGGG	1 cut(s)	1749
BmsI	GCATC	4 cut(s)	148, 892, 1795, 1906
BmtI	GCTAGC	1 cut(s)	1686
BmuI	ACTGGG	1 cut(s)	1749
BpiI	GAAGAC	3 cut(s)	492, 504, 517
BpmI	CTGGAG	4 cut(s)	196, 872, 1208, 1944
Bpu10I	CCTNAGC	1 cut(s)	2133
BpuEI	CTTGAG	2 cut(s)	1040, 1970
BpuMI	CCSGG	1 cut(s)	226
BsaBI	GATNNNNATC	1 cut(s)	1395
BsaHI	GRCGYC	4 cut(s)	108, 405, 429, 522
BsaI	GGTCTC	2 cut(s)	214, 437
BsaJI	CCNNGG	3 cut(s)	224, 587, 1027
BsaWI	WCCGGW	2 cut(s)	133, 289
BsaXI	ACNNNNNCTCC	4 cut(s)	602, 632, 1093, 1123
Bsc4I	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
Bse118I	RCCGGY	2 cut(s)	289, 1233
Bse1I	ACTGG	3 cut(s)	775, 855, 1755
Bse3DI	GCAATG	1 cut(s)	1346
Bse8I	GATNNNNATC	1 cut(s)	1395
BseBI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
BseDI	CCNNGG	3 cut(s)	224, 587, 1027
BseGI	GGATG	7 cut(s)	907, 1297, 1635, 1897, 2068, 2122, 2239
BseJI	GATNNNNATC	1 cut(s)	1395
BseLI	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
BseMI	GCAATG	1 cut(s)	1346
BseMII	CTCAG	3 cut(s)	569, 572, 1047
BseNI	ACTGG	3 cut(s)	775, 855, 1755
BseRI	GAGGAG	6 cut(s)	63, 638, 1205, 1254, 1776, 1947
BseX3I	CGGCCG	1 cut(s)	596
BseXI	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
Bsh1285I	CGRYCG	1 cut(s)	599
BshFI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
BshNI	GGYRCC	3 cut(s)	404, 428, 2217
BshTI	ACCGGT	1 cut(s)	289
BsiEI	CGRYCG	1 cut(s)	599
BsiHKCI	CYCGRG	3 cut(s)	204, 1539, 1788
BsiSI	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
BsiWI	CGTACG	1 cut(s)	600
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
BsmAI	GTCTC	4 cut(s)	105, 214, 437, 675
BsmFI	GGGAC	1 cut(s)	278
BsmI	GAATGC	2 cut(s)	1684, 1896
BsnI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
Bso31I	GGTCTC	2 cut(s)	214, 437
BsoBI	CYCGRG	3 cut(s)	204, 1539, 1788
Bsp1286I	GDGCHC	2 cut(s)	1034, 1171
Bsp143I	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
BspACI	CCGC	6 cut(s)	124, 264, 317, 359, 595, 2238
BspANI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
BspCNI	CTCAG	3 cut(s)	568, 573, 1046
BspHI	TCATGA	1 cut(s)	2181
BspMAI	CTGCAG	1 cut(s)	1974
BspMI	ACCTGC	3 cut(s)	289, 649, 1188
BspOI	GCTAGC	1 cut(s)	1686
BspPI	GGATC	4 cut(s)	467, 749, 762, 1904
BspQI	GCTCTTC	2 cut(s)	1162, 1959
BspT107I	GGYRCC	3 cut(s)	404, 428, 2217
BspTI	CTTAAG	2 cut(s)	1247, 1655
BspTNI	GGTCTC	2 cut(s)	214, 437
BsrDI	GCAATG	1 cut(s)	1346
BsrFI	RCCGGY	2 cut(s)	289, 1233
BsrI	ACTGG	3 cut(s)	775, 855, 1755
BssAI	RCCGGY	2 cut(s)	289, 1233
BssECI	CCNNGG	3 cut(s)	224, 587, 1027
BssMI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
BssNAI	GTATAC	1 cut(s)	1525
BssNI	GRCGYC	4 cut(s)	108, 405, 429, 522
Bst1107I	GTATAC	1 cut(s)	1525
Bst2UI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
Bst4CI	ACNGT	6 cut(s)	27, 99, 505, 916, 1667, 1882
Bst6I	CTCTTC	4 cut(s)	381, 996, 1162, 1959
BstACI	GRCGYC	4 cut(s)	108, 405, 429, 522
BstAFI	CTTAAG	2 cut(s)	1247, 1655
BstC8I	GCNNGC	5 cut(s)	197, 201, 1231, 1684, 2240
BstDEI	CTNAG	7 cut(s)	172, 555, 581, 1033, 1516, 1914, 2133
BstF5I	GGATG	7 cut(s)	907, 1297, 1635, 1897, 2068, 2122, 2239
BstH2I	RGCGCY	2 cut(s)	408, 432
BstHHI	GCGC	2 cut(s)	407, 431
BstKTI	GATC	9 cut(s)	181, 475, 700, 757, 1246, 1327, 1620, 1912, 2053
BstMAI	GTCTC	4 cut(s)	105, 214, 437, 675
BstMBI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
BstMCI	CGRYCG	1 cut(s)	599
BstMWI	GCNNNNNNNGC	8 cut(s)	196, 313, 322, 328, 365, 592, 862, 1180
BstNI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
BstSCI	CCNGG	6 cut(s)	212, 224, 865, 1026, 1272, 1608
BstSFI	CTRYAG	5 cut(s)	744, 1092, 1224, 1970, 2124
BstV1I	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
BstV2I	GAAGAC	3 cut(s)	492, 504, 517
BstX2I	RGATCY	2 cut(s)	754, 1617
BstYI	RGATCY	2 cut(s)	754, 1617
BstZ17I	GTATAC	1 cut(s)	1525
BstZI	CGGCCG	1 cut(s)	596
BsuI	GTATCC	1 cut(s)	1208
BsuRI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
BtgZI	GCGATG	1 cut(s)	2013
BtrI	CACGTC	2 cut(s)	355, 1570
BtsCI	GGATG	7 cut(s)	907, 1297, 1635, 1897, 2068, 2122, 2239
BtsI	GCAGTG	3 cut(s)	375, 645, 2001
BtsIMutI	CAGTG	6 cut(s)	375, 645, 848, 1246, 1762, 2001
BveI	ACCTGC	3 cut(s)	289, 649, 1188
Cac8I	GCNNGC	5 cut(s)	197, 201, 1231, 1684, 2240
CciI	TCATGA	1 cut(s)	2181
CfoI	GCGC	2 cut(s)	407, 431
Cfr10I	RCCGGY	2 cut(s)	289, 1233
Cfr13I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
CseI	GACGC	2 cut(s)	97, 500
Csp6I	GTAC	7 cut(s)	562, 601, 1024, 1076, 1255, 1404, 2218
CspAI	ACCGGT	1 cut(s)	289
CviAII	CATG	8 cut(s)	220, 824, 1307, 1687, 1774, 2006, 2048, 2182
CviQI	GTAC	7 cut(s)	562, 601, 1024, 1076, 1255, 1404, 2218
DdeI	CTNAG	7 cut(s)	172, 555, 581, 1033, 1516, 1914, 2133
DinI	GGCGCC	2 cut(s)	406, 430
DpnI	GATC	9 cut(s)	180, 474, 699, 756, 1245, 1326, 1619, 1911, 2052
DpnII	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
DraI	TTTAAA	4 cut(s)	31, 861, 1062, 1555
EaeI	YGGCCR	2 cut(s)	17, 596
EagI	CGGCCG	1 cut(s)	596
Eam1104I	CTCTTC	4 cut(s)	381, 996, 1162, 1959
EarI	CTCTTC	4 cut(s)	381, 996, 1162, 1959
EclXI	CGGCCG	1 cut(s)	596
Eco147I	AGGCCT	1 cut(s)	586
Eco24I	GRGCYC	2 cut(s)	1034, 1171
Eco31I	GGTCTC	2 cut(s)	214, 437
Eco32I	GATATC	1 cut(s)	2025
Eco47I	GGWCC	3 cut(s)	228, 292, 1727
Eco52I	CGGCCG	1 cut(s)	596
Eco57I	CTGAAG	4 cut(s)	516, 672, 1014, 1808
Eco88I	CYCGRG	3 cut(s)	204, 1539, 1788
EcoO109I	RGGNCCY	1 cut(s)	1727
EcoRII	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
EcoRV	GATATC	1 cut(s)	2025
EcoT38I	GRGCYC	2 cut(s)	1034, 1171
EgeI	GGCGCC	2 cut(s)	406, 430
EheI	GGCGCC	2 cut(s)	406, 430
FaeI	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
FalI	AAGNNNNNCTT	4 cut(s)	794, 826, 2088, 2120
FaqI	GGGAC	1 cut(s)	278
FatI	CATG	8 cut(s)	219, 823, 1306, 1686, 1773, 2005, 2047, 2181
FauI	CCCGC	3 cut(s)	131, 271, 2231
FauNDI	CATATG	1 cut(s)	2014
FbaI	TGATCA	2 cut(s)	697, 2050
FblI	GTMKAC	3 cut(s)	1473, 1524, 1884
FokI	GGATG	7 cut(s)	914, 1304, 1642, 1884, 2075, 2129, 2246
FriOI	GRGCYC	2 cut(s)	1034, 1171
FspBI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
GlaI	GCGC	2 cut(s)	406, 430
GsuI	CTGGAG	4 cut(s)	196, 872, 1208, 1944
HaeII	RGCGCY	2 cut(s)	408, 432
HaeIII	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
HapII	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
HgaI	GACGC	2 cut(s)	97, 500
HhaI	GCGC	2 cut(s)	407, 431
Hin1I	GRCGYC	4 cut(s)	108, 405, 429, 522
Hin1II	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
Hin6I	GCGC	2 cut(s)	405, 429
HinP1I	GCGC	2 cut(s)	405, 429
HincII	GTYRAC	3 cut(s)	1126, 1885, 1929
HindII	GTYRAC	3 cut(s)	1126, 1885, 1929
HinfI	GANTC	9 cut(s)	311, 419, 540, 545, 613, 814, 983, 1108, 1537
HpaI	GTTAAC	2 cut(s)	1126, 1929
HpaII	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
HphI	GGTGA	3 cut(s)	123, 1655, 1701
Hpy166II	GTNNAC	8 cut(s)	131, 682, 1126, 1474, 1525, 1885, 1929, 1999
Hpy8I	GTNNAC	8 cut(s)	131, 682, 1126, 1474, 1525, 1885, 1929, 1999
Hpy99I	CGWCG	4 cut(s)	113, 473, 494, 509
HpyAV	CCTTC	7 cut(s)	124, 179, 395, 454, 877, 1307, 1542
HpyCH4III	ACNGT	6 cut(s)	27, 99, 505, 916, 1667, 1882
HpyCH4IV	ACGT	7 cut(s)	354, 522, 564, 1145, 1470, 1569, 1870
HpyF10VI	GCNNNNNNNGC	8 cut(s)	196, 313, 322, 328, 365, 592, 862, 1180
HpyF3I	CTNAG	7 cut(s)	172, 555, 581, 1033, 1516, 1914, 2133
HpySE526I	ACGT	7 cut(s)	354, 522, 564, 1145, 1470, 1569, 1870
Hsp92I	GRCGYC	4 cut(s)	108, 405, 429, 522
Hsp92II	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
HspAI	GCGC	2 cut(s)	405, 429
KasI	GGCGCC	2 cut(s)	404, 428
KpnI	GGTACC	1 cut(s)	2221
Ksp22I	TGATCA	2 cut(s)	697, 2050
KspAI	GTTAAC	2 cut(s)	1126, 1929
Kzo9I	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
LguI	GCTCTTC	2 cut(s)	1162, 1959
LmnI	GCTCC	7 cut(s)	136, 843, 853, 958, 1192, 1267, 1960
Lsp1109I	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
LweI	GCATC	4 cut(s)	148, 892, 1795, 1906
MaeI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
MaeII	ACGT	7 cut(s)	354, 522, 564, 1145, 1470, 1569, 1870
MaeIII	GTNAC	5 cut(s)	21, 804, 910, 1268, 2119
MalI	GATC	9 cut(s)	180, 474, 699, 756, 1245, 1326, 1619, 1911, 2052
MboI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
MfeI	CAATTG	1 cut(s)	1640
MflI	RGATCY	2 cut(s)	754, 1617
MhlI	GDGCHC	2 cut(s)	1034, 1171
Mly113I	GGCGCC	2 cut(s)	405, 429
MlyI	GAGTC	4 cut(s)	549, 992, 1102, 1531
MmeI	TCCRAC	3 cut(s)	573, 588, 865
MroXI	GAANNNNTTC	1 cut(s)	1821
MspA1I	CMGCKG	3 cut(s)	322, 1852, 1934
MspCI	CTTAAG	2 cut(s)	1247, 1655
MspI	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
MspR9I	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
MunI	CAATTG	1 cut(s)	1640
Mva1269I	GAATGC	2 cut(s)	1684, 1896
MvaI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
MwoI	GCNNNNNNNGC	8 cut(s)	196, 313, 322, 328, 365, 592, 862, 1180
NarI	GGCGCC	2 cut(s)	405, 429
NciI	CCSGG	1 cut(s)	226
NdeI	CATATG	1 cut(s)	2014
NdeII	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
NheI	GCTAGC	1 cut(s)	1682
NlaIII	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
NmeAIII	GCCGAG	1 cut(s)	216
NmuCI	GTSAC	1 cut(s)	21
PaeR7I	CTCGAG	1 cut(s)	1539
PagI	TCATGA	1 cut(s)	2181
PceI	AGGCCT	1 cut(s)	586
PciSI	GCTCTTC	2 cut(s)	1162, 1959
PctI	GAATGC	2 cut(s)	1684, 1896
PdmI	GAANNNNTTC	1 cut(s)	1821
PfeI	GAWTC	5 cut(s)	311, 419, 545, 613, 814
Pfl23II	CGTACG	1 cut(s)	600
PflFI	GACNNNGTC	1 cut(s)	503
PinAI	ACCGGT	1 cut(s)	289
PleI	GAGTC	4 cut(s)	548, 991, 1102, 1531
PluTI	GGCGCC	2 cut(s)	408, 432
PpsI	GAGTC	4 cut(s)	548, 991, 1102, 1531
PpuMI	RGGWCCY	1 cut(s)	1727
Psp5II	RGGWCCY	1 cut(s)	1727
Psp6I	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
PspGI	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
PspLI	CGTACG	1 cut(s)	600
PspPI	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
PspPPI	RGGWCCY	1 cut(s)	1727
PstI	CTGCAG	1 cut(s)	1974
PsuI	RGATCY	2 cut(s)	754, 1617
PsyI	GACNNNGTC	1 cut(s)	503
PvuII	CAGCTG	3 cut(s)	322, 1852, 1934
RsaI	GTAC	7 cut(s)	563, 602, 1025, 1077, 1256, 1405, 2219
RsaNI	GTAC	7 cut(s)	562, 601, 1024, 1076, 1255, 1404, 2218
SalI	GTCGAC	1 cut(s)	1883
SapI	GCTCTTC	2 cut(s)	1162, 1959
Sau3AI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
Sau96I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
ScaI	AGTACT	1 cut(s)	1256
SchI	GAGTC	4 cut(s)	549, 992, 1102, 1531
ScrFI	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
SduI	GDGCHC	2 cut(s)	1034, 1171
SfaNI	GCATC	4 cut(s)	148, 892, 1795, 1906
SfcI	CTRYAG	5 cut(s)	744, 1092, 1224, 1970, 2124
SfoI	GGCGCC	2 cut(s)	406, 430
Sfr274I	CTCGAG	1 cut(s)	1539
SinI	GGWCC	3 cut(s)	228, 292, 1727
SlaI	CTCGAG	1 cut(s)	1539
SmlI	CTYRAG	5 cut(s)	1019, 1247, 1539, 1655, 1949
SmoI	CTYRAG	5 cut(s)	1019, 1247, 1539, 1655, 1949
SseBI	AGGCCT	1 cut(s)	586
SsiI	CCGC	6 cut(s)	124, 264, 317, 359, 595, 2238
SspDI	GGCGCC	2 cut(s)	404, 428
SspMI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
StuI	AGGCCT	1 cut(s)	586
StyD4I	CCNGG	6 cut(s)	212, 224, 865, 1026, 1272, 1608
TaaI	ACNGT	6 cut(s)	27, 99, 505, 916, 1667, 1882
TaiI	ACGT	7 cut(s)	357, 525, 567, 1148, 1473, 1572, 1873
TaqI	TCGA	7 cut(s)	183, 348, 543, 686, 1535, 1540, 1884
TaqII	GACCGA	1 cut(s)	461
TatI	WGTACW	1 cut(s)	1254
TauI	GCSGC	2 cut(s)	319, 598
TfiI	GAWTC	5 cut(s)	311, 419, 545, 613, 814
TscAI	CASTG	6 cut(s)	375, 652, 855, 1246, 1762, 2001
TseFI	GTSAC	1 cut(s)	21
TseI	GCWGC	8 cut(s)	319, 322, 1318, 1793, 1894, 1934, 1969, 2129
Tsp45I	GTSAC	1 cut(s)	21
TspGWI	ACGGA	2 cut(s)	107, 1101
TspRI	CASTG	6 cut(s)	375, 652, 855, 1246, 1762, 2001
Tth111I	GACNNNGTC	1 cut(s)	503
Vha464I	CTTAAG	2 cut(s)	1247, 1655
VpaK11BI	GGWCC	3 cut(s)	228, 292, 1727
XapI	RAATTY	4 cut(s)	1097, 1426, 1550, 1714
XbaI	TCTAGA	2 cut(s)	673, 1376
XcmI	CCANNNNNNNNNTGG	1 cut(s)	652
XhoI	CTCGAG	1 cut(s)	1539
XmiI	GTMKAC	3 cut(s)	1473, 1524, 1884
XmnI	GAANNNNTTC	1 cut(s)	1821
XspI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
ZraI	GACGTC	1 cut(s)	523
ZrmI	AGTACT	1 cut(s)	1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.