Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000222.1

Orthogroup ID

OG0002474

Physical Location & Seq

Genomic Coordinates Forward (+)

32423 .. 41674

Gene Structure 9252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000222.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2805 bp

atgtggacgaggagagcaccaaccttgtcacagggttcttttcttgccttccggaaaaggacttctttgccttacgcggggcgttacccttgcttcgctggtgaggctgacagtcggctcgcgaggagactaggactggcgggcggtcaccgggcttcaacaaggttgaggcttgcccgattgtttgcctctagtcatgcaaagccgagatttggctggtcatgcatgggacggtggaagcgtaaaaatcaattaaccggtcaagcacatcagcaatgcccagtcaaaccgagaccggtgcacttgctcttagagcagccccagagttgggagttggaagtggaaagtttgatcgggggaagtaatgcaaattttgtggatcgtaaaagacgcatgtttcggcatctaggatggctggttggtctcacctataaatcctcatcaaagcgattggcagatgccaacccggctctgcctccgcctcaactcaggccgccggtggctatgttggacgctgttcaggagatcgctatttacatccaccgcttccacaatctcgatcttttccaacaaggatggtaccaaattaagatcaccatgagatgggaggacagtgactttatgggcactccagcaagagttgttcaatatgaagctcccgatcttggttctgatgatgtatatggagtatggaggatagatgatacagacaacagcttctcaactcagccttttcgtatcaaatatgcaaggcaggacgtctttttatcaatcatgatatcgttcaatatgtctcttgctggaaatgagggtctatcctcatctgctgttcttttgaagtttgagcttatgcatgcccccatatcgggaaataggtctgacttgcaggcagctctggatgctaatcctgccgctgtccatgaatttcgaattcctcctaaagctcttttgggtttgcattcatattgccctgttcattttgatgcgttccattcagtgcttgttgatgttagtatacacatcagtctactaaaagctccttacaaacatcaatcgaaggtatccagtgatcagagcattgctgaaggtgttggtggagaaacttctgagtcaaatcaagaagcaggtcaagtagctagtgcagactctaatggcatcatgcttcttaaatcattgttagctgctcgtagcatactgcttgaagagctccagacacttagcaaagctcttgaccaagaaattgatatgactgattttatttctaaaatggataatacgaatgattctttcctgcaagaaaatttggttgcagcagatgacaaagtttcaggacaaggcaagccacaaaatggtcttgagaaagcaaatggcgcatcagattctagaactggtgaattgccacgatctatatcaaggggtgccgtactgaattcttttaattcattgggagatcaagttttatatctctggaatacgtttttgcaattccacaggtttaacaaaacgaagatactggaatacttgcgtgacacatgggctaaagatagaagagctgaatggtcaatatggatggtttactctaaggttgagatgcctcatcactttctaaatagcgggtttgatgagtcttccaatagtggtggccataggagagctccaagtttgtggaagctgaatgatgatcctgcacagattgcagctacgcgtgctgagcttcatagacgaagtattgcacaaatgaagattaacaatcgatcaattcaagacttgcatatatttggagatccatcaagcattcctattgttattgtggagcgtgtcttgaatgcccctaggcgtactaatagtgaaaattcttacttgagacatatggatgtgttaaatgctcctggcttgcaaagtgtatatgggtcagaatctgtaaacaagcaatctggctatagctcctcaaagaaaggccgtgttttgaagattgttgtctttgtgcatggctttcaggggcatcatctggatttacggctcattcgaaatcaatggcttttggtagatcccaaggcagagtttctaatgtcagaggcaaacgaagacaaaacatccagtgatttcagagaaatgggacaaaggttagctcaggaagttattactttccttaagaagaaaatggataaagcttcaagatctggaagcttagcggatattaagcttagctttgtgggacattctattggaaatgtcataataagaacggcactaacagaggctatgatggagccataccttagatacctacacgtatatgtttctatatcgggtccgcacttggggtatctatacagttcaaactctttatttaactctgggctgtggcttttgaagaagctcaagaacactcaatgcattcatcaacttactttcacagatgatccagacctccaaaatacattcttttaccagctctgtaagaagaagacgctagaaaatttcaagcatataatcctgttatcttcaccacaggatggttatgttccttaccattctgccagaatagatatgtgccaagctgcttcattagacttttccaaaaggggcaaagtttttctggaaatgctgaacgactgcttggatcaaatacggtctcctcgcttggagaatcgagtgttcatgcgctgtgacgtcaactttgacacctcttcatatggaaagaacttgaacacattcatcggaagggccgcccatattgattttttggaatctgacatttttgcaagattcctcatgtggtctttcccagacttatttcggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004856 GO:0005975 GO:0005996 GO:0005997 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019321 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0046835 GO:0071704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3657 DUF676

Protein Analysis

934

Amino Acids

105.8

Weight (kDa)

9.22

Isoelectric Point (pI)

45.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09980 AT1G09980 AT1G09980 AT1G58350 AT1G58350 AT1G58350 AT1G58350
fragaria_vesca	FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540
malus_domestica	MD08G1211000.v1.1 MD15G1398300.v1.1
prunus_persica	Prupe.1G542900_v2.0.a1
pyrus_communis	pycom08g18180
rosa_chinensis	RchiOBHm_Chr7g0232361
rosa_laevigata	RLG00000001352
rosa_multiflora	Rmu_sc0000222.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228420
rosa_rugosa	Rorug07G0272900 Rorug07G0273000
rosa_samantha	Rh7AG426700 Rh7BG400500 Rh7CG446500 Rh7DG418100
rosa_wichuraiana	Rw7G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	762, 2676
Acc36I	ACCTGC	1 cut(s)	1115
Acc65I	GGTACC	1 cut(s)	579
AccB1I	GGYRCC	2 cut(s)	579, 1418
AccB7I	CCANNNNNTGG	3 cut(s)	603, 1349, 2516
AccI	GTMKAC	2 cut(s)	1015, 1027
AccII	CGCG	3 cut(s)	77, 122, 1705
AccIII	TCCGGA	1 cut(s)	51
AclWI	GGATC	6 cut(s)	387, 1676, 1778, 2042, 2417, 2631
AcoI	YGGCCR	1 cut(s)	1642
AcsI	RAATTY	7 cut(s)	370, 923, 930, 1300, 1429, 1852, 2479
AcuI	CTGAAG	1 cut(s)	1104
AcyI	GRCGYC	2 cut(s)	759, 2673
AfaI	GTAC	3 cut(s)	581, 1425, 1840
AflII	CTTAAG	1 cut(s)	2150
AflIII	ACRYGT	2 cut(s)	1703, 2290
AgeI	ACCGGT	2 cut(s)	257, 295
AjnI	CCWGG	1 cut(s)	1888
AjuI	GAANNNNNNNTTGG	2 cut(s)	2603, 2635
Alw21I	GWGCWC	4 cut(s)	19, 303, 1209, 1657
Alw26I	GTCTC	6 cut(s)	121, 286, 428, 798, 1858, 2640
Alw44I	GTGCAC	1 cut(s)	299
AlwI	GGATC	6 cut(s)	387, 1676, 1778, 2042, 2417, 2631
AlwNI	CAGNNNCTG	1 cut(s)	1919
Aor13HI	TCCGGA	1 cut(s)	51
AoxI	GGCC	4 cut(s)	491, 1642, 1957, 2727
ApaLI	GTGCAC	1 cut(s)	299
ApeKI	GCWGC	6 cut(s)	316, 890, 1181, 1310, 1697, 2561
ApoI	RAATTY	7 cut(s)	370, 923, 930, 1300, 1429, 1852, 2479
ArsI	GACNNNNNNTTYG	4 cut(s)	381, 413, 2663, 2695
AsiGI	ACCGGT	2 cut(s)	257, 295
Asp700I	GAANNNNTTC	1 cut(s)	2714
Asp718I	GGTACC	1 cut(s)	579
AspA2I	CCTAGG	1 cut(s)	1832
AspLEI	GCGC	2 cut(s)	1373, 2667
AspS9I	GGNCC	2 cut(s)	2312, 2727
AsuC2I	CCSGG	2 cut(s)	152, 467
AsuHPI	GGTGA	6 cut(s)	113, 140, 418, 586, 1403, 2499
AsuII	TTCGAA	2 cut(s)	928, 2026
AvaII	GGWCC	1 cut(s)	2312
AvrII	CCTAGG	1 cut(s)	1832
BaeGI	GKGCMC	2 cut(s)	303, 629
BalI	TGGCCA	1 cut(s)	1644
BanI	GGYRCC	2 cut(s)	579, 1418
BanII	GRGCYC	2 cut(s)	1209, 1657
BbsI	GAAGAC	3 cut(s)	1620, 2091, 2474
Bbv12I	GWGCWC	4 cut(s)	19, 303, 1209, 1657
BbvI	GCAGC	6 cut(s)	328, 902, 1168, 1322, 1709, 2548
BccI	CCATC	7 cut(s)	405, 570, 597, 1564, 1795, 2260, 2510
BceAI	ACGGC	4 cut(s)	1406, 1944, 2033, 2262
BcgI	CGANNNNNNTGC	2 cut(s)	280, 314
BciT130I	CCWGG	1 cut(s)	1890
BciVI	GTATCC	1 cut(s)	1072
BclI	TGATCA	1 cut(s)	1069
BcnI	CCSGG	2 cut(s)	152, 467
BcoDI	GTCTC	6 cut(s)	121, 286, 428, 798, 1858, 2640
BfaI	CTAG	7 cut(s)	131, 192, 407, 1137, 1383, 1833, 2474
BfmI	CTRYAG	1 cut(s)	1939
BfrI	CTTAAG	1 cut(s)	2150
BfuAI	ACCTGC	1 cut(s)	1115
BfuI	GTATCC	1 cut(s)	1072
BglI	GCCNNNNNGGC	1 cut(s)	467
BglII	AGATCT	1 cut(s)	2177
BisI	GCNGC	9 cut(s)	317, 494, 891, 912, 1182, 1311, 1698, 2562, 2730
BlnI	CCTAGG	1 cut(s)	1832
BlpI	GCTNAGC	3 cut(s)	1710, 2188, 2204
BlsI	GCNGC	9 cut(s)	318, 495, 892, 913, 1183, 1312, 1699, 2563, 2731
Bme1390I	CCNGG	3 cut(s)	152, 467, 1890
Bme18I	GGWCC	1 cut(s)	2312
BmgT120I	GGNCC	2 cut(s)	2312, 2727
BmiI	GGNNCC	4 cut(s)	581, 1420, 2271, 2313
BmrFI	CCNGG	3 cut(s)	152, 467, 1890
BmrI	ACTGGG	1 cut(s)	275
BmsI	GCATC	8 cut(s)	412, 448, 889, 973, 1164, 1382, 1581, 2011
BmuI	ACTGGG	1 cut(s)	275
BpiI	GAAGAC	3 cut(s)	1620, 2091, 2474
BpmI	CTGGAG	2 cut(s)	615, 1193
Bpu10I	CCTNAGC	1 cut(s)	2130
Bpu1102I	GCTNAGC	3 cut(s)	1710, 2188, 2204
Bpu14I	TTCGAA	2 cut(s)	928, 2026
BpuEI	CTTGAG	3 cut(s)	1376, 1882, 2366
BpuMI	CCSGG	2 cut(s)	152, 467
Bsa29I	ATCGAT	1 cut(s)	1753
BsaAI	YACGTR	1 cut(s)	2293
BsaBI	GATNNNNATC	2 cut(s)	903, 1408
BsaHI	GRCGYC	2 cut(s)	759, 2673
BsaI	GGTCTC	3 cut(s)	286, 428, 2640
BsaJI	CCNNGG	2 cut(s)	1832, 2052
BsaWI	WCCGGW	3 cut(s)	51, 257, 295
BsaXI	ACNNNNNCTCC	2 cut(s)	1440, 1470
Bse118I	RCCGGY	3 cut(s)	257, 295, 496
Bse1I	ACTGG	6 cut(s)	141, 281, 1065, 1393, 1518, 2097
Bse3DI	GCAATG	2 cut(s)	281, 1077
Bse8I	GATNNNNATC	2 cut(s)	903, 1408
BseAI	TCCGGA	1 cut(s)	51
BseBI	CCWGG	1 cut(s)	1890
BseCI	ATCGAT	1 cut(s)	1753
BseDI	CCNNGG	2 cut(s)	1832, 2052
BseGI	GGATG	8 cut(s)	416, 537, 581, 904, 1575, 1879, 2093, 2521
BseJI	GATNNNNATC	2 cut(s)	903, 1408
BseMI	GCAATG	2 cut(s)	281, 1077
BseMII	CTCAG	5 cut(s)	502, 740, 1098, 1701, 2144
BseNI	ACTGG	6 cut(s)	141, 281, 1065, 1393, 1518, 2097
BseRI	GAGGAG	4 cut(s)	25, 139, 1936, 2628
BseSI	GKGCMC	2 cut(s)	303, 629
BseXI	GCAGC	6 cut(s)	328, 902, 1168, 1322, 1709, 2548
BsgI	GTGCAG	2 cut(s)	1161, 1671
Bsh1236I	CGCG	3 cut(s)	77, 122, 1705
BshFI	GGCC	4 cut(s)	493, 1644, 1959, 2729
BshNI	GGYRCC	2 cut(s)	579, 1418
BshTI	ACCGGT	2 cut(s)	257, 295
BshVI	ATCGAT	1 cut(s)	1753
BsiHKAI	GWGCWC	4 cut(s)	19, 303, 1209, 1657
BsiSI	CCGG	6 cut(s)	52, 151, 258, 296, 467, 497
BslFI	GGGAC	3 cut(s)	243, 2130, 2229
BsmAI	GTCTC	6 cut(s)	121, 286, 428, 798, 1858, 2640
BsmFI	GGGAC	3 cut(s)	243, 2130, 2229
BsmI	GAATGC	4 cut(s)	958, 1794, 1831, 2397
BsnI	GGCC	4 cut(s)	493, 1644, 1959, 2729
Bso31I	GGTCTC	3 cut(s)	286, 428, 2640
Bsp119I	TTCGAA	2 cut(s)	928, 2026
Bsp1286I	GDGCHC	5 cut(s)	19, 303, 629, 1209, 1657
Bsp13I	TCCGGA	1 cut(s)	51
Bsp1720I	GCTNAGC	3 cut(s)	1710, 2188, 2204
Bsp68I	TCGCGA	1 cut(s)	122
BspANI	GGCC	4 cut(s)	493, 1644, 1959, 2729
BspCNI	CTCAG	5 cut(s)	501, 739, 1099, 1702, 2143
BspDI	ATCGAT	1 cut(s)	1753
BspEI	TCCGGA	1 cut(s)	51
BspFNI	CGCG	3 cut(s)	77, 122, 1705
BspHI	TCATGA	1 cut(s)	774
BspLI	GGNNCC	4 cut(s)	581, 1420, 2271, 2313
BspMI	ACCTGC	1 cut(s)	1115
BspPI	GGATC	6 cut(s)	387, 1676, 1778, 2042, 2417, 2631
BspQI	GCTCTTC	2 cut(s)	1197, 1543
BspT104I	TTCGAA	2 cut(s)	928, 2026
BspT107I	GGYRCC	2 cut(s)	579, 1418
BspTI	CTTAAG	1 cut(s)	2150
BspTNI	GGTCTC	3 cut(s)	286, 428, 2640
BsrDI	GCAATG	2 cut(s)	281, 1077
BsrFI	RCCGGY	3 cut(s)	257, 295, 496
BsrI	ACTGG	6 cut(s)	141, 281, 1065, 1393, 1518, 2097
BssAI	RCCGGY	3 cut(s)	257, 295, 496
BssECI	CCNNGG	2 cut(s)	1832, 2052
BssNAI	GTATAC	1 cut(s)	1016
BssNI	GRCGYC	2 cut(s)	759, 2673
BssT1I	CCWWGG	2 cut(s)	1832, 2052
Bst1107I	GTATAC	1 cut(s)	1016
Bst2UI	CCWGG	1 cut(s)	1890
Bst4CI	ACNGT	5 cut(s)	113, 234, 614, 2336, 2634
Bst6I	CTCTTC	3 cut(s)	1197, 1543, 2695
BstACI	GRCGYC	2 cut(s)	759, 2673
BstAFI	CTTAAG	1 cut(s)	2150
BstAPI	GCANNNNNTGC	1 cut(s)	1694
BstBAI	YACGTR	1 cut(s)	2293
BstBI	TTCGAA	2 cut(s)	928, 2026
BstC8I	GCNNGC	8 cut(s)	120, 142, 174, 855, 888, 1340, 1707, 1895
BstEII	GGTNACC	1 cut(s)	146
BstF5I	GGATG	8 cut(s)	416, 537, 581, 904, 1575, 1879, 2093, 2521
BstFNI	CGCG	3 cut(s)	77, 122, 1705
BstHHI	GCGC	2 cut(s)	1373, 2667
BstMAI	GTCTC	6 cut(s)	121, 286, 428, 798, 1858, 2640
BstNI	CCWGG	1 cut(s)	1890
BstNSI	RCATGY	2 cut(s)	397, 857
BstPI	GGTNACC	1 cut(s)	146
BstSCI	CCNGG	3 cut(s)	150, 465, 1888
BstSFI	CTRYAG	1 cut(s)	1939
BstSLI	GKGCMC	2 cut(s)	303, 629
BstUI	CGCG	3 cut(s)	77, 122, 1705
BstV1I	GCAGC	6 cut(s)	328, 902, 1168, 1322, 1709, 2548
BstV2I	GAAGAC	3 cut(s)	1620, 2091, 2474
BstX2I	RGATCY	3 cut(s)	1783, 2047, 2177
BstXI	CCANNNNNNTGG	1 cut(s)	1665
BstYI	RGATCY	3 cut(s)	1783, 2047, 2177
BstZ17I	GTATAC	1 cut(s)	1016
Bsu15I	ATCGAT	1 cut(s)	1753
BsuI	GTATCC	1 cut(s)	1072
BsuRI	GGCC	4 cut(s)	493, 1644, 1959, 2729
BsuTUI	ATCGAT	1 cut(s)	1753
BtsCI	GGATG	8 cut(s)	416, 537, 581, 904, 1575, 1879, 2093, 2521
BtsIMutI	CAGTG	4 cut(s)	619, 1002, 1072, 2104
BtuMI	TCGCGA	1 cut(s)	122
BveI	ACCTGC	1 cut(s)	1115
Cac8I	GCNNGC	8 cut(s)	120, 142, 174, 855, 888, 1340, 1707, 1895
CaiI	CAGNNNCTG	1 cut(s)	1919
CciI	TCATGA	1 cut(s)	774
CfoI	GCGC	2 cut(s)	1373, 2667
Cfr10I	RCCGGY	3 cut(s)	257, 295, 496
Cfr13I	GGNCC	2 cut(s)	2312, 2727
ClaI	ATCGAT	1 cut(s)	1753
CseI	GACGC	3 cut(s)	399, 521, 2479
Csp6I	GTAC	3 cut(s)	580, 1424, 1839
CspAI	ACCGGT	2 cut(s)	257, 295
CspCI	CAANNNNNGTGG	4 cut(s)	357, 392, 1621, 1656
CviQI	GTAC	3 cut(s)	580, 1424, 1839
EaeI	YGGCCR	1 cut(s)	1642
Eam1104I	CTCTTC	3 cut(s)	1197, 1543, 2695
EarI	CTCTTC	3 cut(s)	1197, 1543, 2695
EciI	GGCGGA	1 cut(s)	468
Ecl136II	GAGCTC	2 cut(s)	1207, 1655
Eco130I	CCWWGG	2 cut(s)	1832, 2052
Eco24I	GRGCYC	2 cut(s)	1209, 1657
Eco31I	GGTCTC	3 cut(s)	286, 428, 2640
Eco32I	GATATC	1 cut(s)	780
Eco47I	GGWCC	1 cut(s)	2312
Eco53kI	GAGCTC	2 cut(s)	1207, 1655
Eco57I	CTGAAG	1 cut(s)	1104
Eco91I	GGTNACC	1 cut(s)	146
EcoICRI	GAGCTC	2 cut(s)	1207, 1655
EcoO65I	GGTNACC	1 cut(s)	146
EcoRI	GAATTC	2 cut(s)	930, 1429
EcoRII	CCWGG	1 cut(s)	1888
EcoRV	GATATC	1 cut(s)	780
EcoT14I	CCWWGG	2 cut(s)	1832, 2052
EcoT22I	ATGCAT	3 cut(s)	227, 855, 2399
EcoT38I	GRGCYC	2 cut(s)	1209, 1657
ErhI	CCWWGG	2 cut(s)	1832, 2052
FalI	AAGNNNNNCTT	4 cut(s)	49, 81, 2192, 2224
FaqI	GGGAC	3 cut(s)	243, 2130, 2229
FauI	CCCGC	3 cut(s)	70, 133, 1607
FauNDI	CATATG	2 cut(s)	1869, 2695
FbaI	TGATCA	1 cut(s)	1069
FblI	GTMKAC	2 cut(s)	1015, 1027
Fnu4HI	GCNGC	9 cut(s)	317, 494, 891, 912, 1182, 1311, 1698, 2562, 2730
FokI	GGATG	8 cut(s)	423, 524, 588, 911, 1582, 1886, 2080, 2528
FriOI	GRGCYC	2 cut(s)	1209, 1657
Fsp4HI	GCNGC	9 cut(s)	317, 494, 891, 912, 1182, 1311, 1698, 2562, 2730
FspBI	CTAG	7 cut(s)	131, 192, 407, 1137, 1383, 1833, 2474
GlaI	GCGC	2 cut(s)	1372, 2666
GluI	GCNGC	9 cut(s)	317, 494, 891, 912, 1182, 1311, 1698, 2562, 2730
GsuI	CTGGAG	2 cut(s)	615, 1193
HaeIII	GGCC	4 cut(s)	493, 1644, 1959, 2729
HapII	CCGG	6 cut(s)	52, 151, 258, 296, 467, 497
HgaI	GACGC	3 cut(s)	399, 521, 2479
HhaI	GCGC	2 cut(s)	1373, 2667
Hin1I	GRCGYC	2 cut(s)	759, 2673
Hin6I	GCGC	2 cut(s)	1371, 2665
HinP1I	GCGC	2 cut(s)	1371, 2665
HincII	GTYRAC	1 cut(s)	2677
HindII	GTYRAC	1 cut(s)	2677
HindIII	AAGCTT	3 cut(s)	2169, 2185, 2201
HinfI	GANTC	9 cut(s)	1109, 1145, 1283, 1379, 1625, 1916, 2650, 2750, 2769
HpaII	CCGG	6 cut(s)	52, 151, 258, 296, 467, 497
HphI	GGTGA	6 cut(s)	113, 140, 418, 586, 1403, 2499
Hpy166II	GTNNAC	7 cut(s)	6, 301, 1016, 1028, 1576, 1924, 2677
Hpy8I	GTNNAC	7 cut(s)	6, 301, 1016, 1028, 1576, 1924, 2677
HpyAV	CCTTC	4 cut(s)	58, 1051, 1079, 2718
HpyCH4III	ACNGT	5 cut(s)	113, 234, 614, 2336, 2634
HpyCH4IV	ACGT	4 cut(s)	759, 1475, 2292, 2673
HpySE526I	ACGT	4 cut(s)	759, 1475, 2292, 2673
Hsp92I	GRCGYC	2 cut(s)	759, 2673
HspAI	GCGC	2 cut(s)	1371, 2665
Kpn2I	TCCGGA	1 cut(s)	51
KpnI	GGTACC	1 cut(s)	583
Ksp22I	TGATCA	1 cut(s)	1069
LguI	GCTCTTC	2 cut(s)	1197, 1543
LmnI	GCTCC	8 cut(s)	661, 1042, 1212, 1660, 1813, 1891, 1949, 2269
Lsp1109I	GCAGC	6 cut(s)	328, 902, 1168, 1322, 1709, 2548
LweI	GCATC	8 cut(s)	412, 448, 889, 973, 1164, 1382, 1581, 2011
MaeI	CTAG	7 cut(s)	131, 192, 407, 1137, 1383, 1833, 2474
MaeII	ACGT	4 cut(s)	759, 1475, 2292, 2673
MaeIII	GTNAC	6 cut(s)	27, 83, 146, 614, 1526, 2669
MflI	RGATCY	3 cut(s)	1783, 2047, 2177
MhlI	GDGCHC	5 cut(s)	19, 303, 629, 1209, 1657
MlsI	TGGCCA	1 cut(s)	1644
MluI	ACGCGT	1 cut(s)	1703
MluNI	TGGCCA	1 cut(s)	1644
MlyI	GAGTC	3 cut(s)	1118, 1139, 1634
MmeI	TCCRAC	3 cut(s)	315, 489, 592
Mox20I	TGGCCA	1 cut(s)	1644
Mph1103I	ATGCAT	3 cut(s)	227, 855, 2399
MroI	TCCGGA	1 cut(s)	51
MroXI	GAANNNNTTC	1 cut(s)	2714
MscI	TGGCCA	1 cut(s)	1644
MslI	CAYNNNNRTG	3 cut(s)	981, 1872, 2295
Msp20I	TGGCCA	1 cut(s)	1644
MspA1I	CMGCKG	1 cut(s)	914
MspCI	CTTAAG	1 cut(s)	2150
MspI	CCGG	6 cut(s)	52, 151, 258, 296, 467, 497
MspR9I	CCNGG	3 cut(s)	152, 467, 1890
Mva1269I	GAATGC	4 cut(s)	958, 1794, 1831, 2397
MvaI	CCWGG	1 cut(s)	1890
MvnI	CGCG	3 cut(s)	77, 122, 1705
NciI	CCSGG	2 cut(s)	152, 467
NdeI	CATATG	2 cut(s)	1869, 2695
NlaIV	GGNNCC	4 cut(s)	581, 1420, 2271, 2313
NmeAIII	GCCGAG	1 cut(s)	231
NmuCI	GTSAC	5 cut(s)	27, 146, 614, 1526, 2669
NruI	TCGCGA	1 cut(s)	122
NsiI	ATGCAT	3 cut(s)	227, 855, 2399
NspI	RCATGY	2 cut(s)	397, 857
NspV	TTCGAA	2 cut(s)	928, 2026
PaeI	GCATGC	1 cut(s)	857
PagI	TCATGA	1 cut(s)	774
PciSI	GCTCTTC	2 cut(s)	1197, 1543
PcsI	WCGNNNNNNNCGW	2 cut(s)	238, 2023
PctI	GAATGC	4 cut(s)	958, 1794, 1831, 2397
PdmI	GAANNNNTTC	1 cut(s)	2714
PfeI	GAWTC	6 cut(s)	1283, 1379, 1916, 2650, 2750, 2769
PflMI	CCANNNNNTGG	3 cut(s)	603, 1349, 2516
PinAI	ACCGGT	2 cut(s)	257, 295
PkrI	GCNGC	9 cut(s)	318, 495, 892, 913, 1183, 1312, 1699, 2563, 2731
PleI	GAGTC	3 cut(s)	1117, 1139, 1633
PpsI	GAGTC	3 cut(s)	1117, 1139, 1633
Ppu21I	YACGTR	1 cut(s)	2293
Psp124BI	GAGCTC	2 cut(s)	1209, 1657
Psp6I	CCWGG	1 cut(s)	1888
PspEI	GGTNACC	1 cut(s)	146
PspGI	CCWGG	1 cut(s)	1888
PspN4I	GGNNCC	4 cut(s)	581, 1420, 2271, 2313
PspPI	GGNCC	2 cut(s)	2312, 2727
PstNI	CAGNNNCTG	1 cut(s)	1919
PsuI	RGATCY	3 cut(s)	1783, 2047, 2177
RruI	TCGCGA	1 cut(s)	122
RsaI	GTAC	3 cut(s)	581, 1425, 1840
RsaNI	GTAC	3 cut(s)	580, 1424, 1839
RseI	CAYNNNNRTG	3 cut(s)	981, 1872, 2295
SacI	GAGCTC	2 cut(s)	1209, 1657
SapI	GCTCTTC	2 cut(s)	1197, 1543
SatI	GCNGC	9 cut(s)	317, 494, 891, 912, 1182, 1311, 1698, 2562, 2730
Sau96I	GGNCC	2 cut(s)	2312, 2727
SchI	GAGTC	3 cut(s)	1118, 1139, 1634
ScrFI	CCNGG	3 cut(s)	152, 467, 1890
SduI	GDGCHC	5 cut(s)	19, 303, 629, 1209, 1657
SfaNI	GCATC	8 cut(s)	412, 448, 889, 973, 1164, 1382, 1581, 2011
SfcI	CTRYAG	1 cut(s)	1939
SfuI	TTCGAA	2 cut(s)	928, 2026
SgrAI	CRCCGGYG	1 cut(s)	496
SinI	GGWCC	1 cut(s)	2312
SmiMI	CAYNNNNRTG	3 cut(s)	981, 1872, 2295
SmlI	CTYRAG	4 cut(s)	1355, 1861, 2150, 2381
SmoI	CTYRAG	4 cut(s)	1355, 1861, 2150, 2381
SphI	GCATGC	1 cut(s)	857
SspMI	CTAG	7 cut(s)	131, 192, 407, 1137, 1383, 1833, 2474
SstI	GAGCTC	2 cut(s)	1209, 1657
StyD4I	CCNGG	3 cut(s)	150, 465, 1888
StyI	CCWWGG	2 cut(s)	1832, 2052
TaaI	ACNGT	5 cut(s)	113, 234, 614, 2336, 2634
TaiI	ACGT	4 cut(s)	762, 1478, 2295, 2676
TaqI	TCGA	6 cut(s)	558, 928, 1055, 1753, 2026, 2653
TauI	GCSGC	3 cut(s)	496, 914, 2732
TfiI	GAWTC	6 cut(s)	1283, 1379, 1916, 2650, 2750, 2769
TscAI	CASTG	4 cut(s)	619, 1002, 1072, 2104
TseFI	GTSAC	5 cut(s)	27, 146, 614, 1526, 2669
TseI	GCWGC	6 cut(s)	316, 890, 1181, 1310, 1697, 2561
Tsp45I	GTSAC	5 cut(s)	27, 146, 614, 1526, 2669
TspRI	CASTG	4 cut(s)	619, 1002, 1072, 2104
Van91I	CCANNNNNTGG	3 cut(s)	603, 1349, 2516
Vha464I	CTTAAG	1 cut(s)	2150
VneI	GTGCAC	1 cut(s)	299
VpaK11BI	GGWCC	1 cut(s)	2312
XapI	RAATTY	7 cut(s)	370, 923, 930, 1300, 1429, 1852, 2479
XbaI	TCTAGA	1 cut(s)	1382
XceI	RCATGY	2 cut(s)	397, 857
XmaJI	CCTAGG	1 cut(s)	1832
XmiI	GTMKAC	2 cut(s)	1015, 1027
XmnI	GAANNNNTTC	1 cut(s)	2714
XspI	CTAG	7 cut(s)	131, 192, 407, 1137, 1383, 1833, 2474
ZraI	GACGTC	2 cut(s)	760, 2674
Zsp2I	ATGCAT	3 cut(s)	227, 855, 2399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.