Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0002474

Physical Location & Seq

Genomic Coordinates Forward (+)

57339231 .. 57347413

Gene Structure 8183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG426700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGTTTCGGCATCTAGGATGGCTGGTTGGTCTCACCTATAAATCCTCATCAAAGCGATTGGCAGATGCCAACCCGGCTCTGCCTCCGCCTCAACTCAGGCCGCCGGTGGCTATGTTGGACGCTGTTCAGGAGATCGCTATTTACATCCACCGCTTCCACAATCTCGATCTTTTCCAACAAGGATGGTACCAAATTAAGATCACCATGAGATGGGAGGACAGTGACTTTATGGGCACTCCAGCAAGAGTTGTTCAATATGAAGCTCCCGATCTTGGTTCTGATGATGTATATGGAGTATGGAGGATAGATGATACAGACAACAGCTTCTCAACTCAGCCTTTTCGTATCAAATATGCAAGGCAGGACGTCTTTTTATCAATCATGATATCGTTCAATATGTCTCTTGCTGGAAATGAGGGTCTATCCTCATCTGCTGTTCTTTTGAAGTTTGAGCTTATGCATGCCCCCATATCGGGAAATAGGTCTGACTTGCAGGCAGCTCTGGATGCTAATCCTGCCGCTGTCCATGAATTTCGAATTCCTCCTAAAGCTCTTTTGGGTTTGCATTCATATTGCCCTGTTCATTTTGATGCGTTCCATTCAGTGCTTGTTGATGTTAGTATACACATCAGTCTACTAAAAGCTCCTTACAAACATCAATCGAAGGTATCCAGTGATCATAGCACTGCTGAAGGTGTTGGTGGAGAAACTTCTGAGTCAAATCAAGAAGCAGGTCAAGTAGCTAGTGCAGACTCTAATGGCATCATGCTTCTTAAATCATTGTTAGCTGCTCGTAGCATACTGCTTGAAGAGCTCCAGACACTTAGCAAGGCTCTTGACCAAGAAATTGATTTGACTGATTTTATTTCTAAAATGGATAATACGAATGATTCTTTCCTGCAAGAAAATTTGGTTGCAGCAGATGACAAAGTTTCAGGACAAGGCAAGCCACAAAATGGTCTTGAGAAAGCAAATGGCGCATCAGATTCTAGAACTGGTGAATTGCCACGATCTATATCAAGGGGTGCCGTACTGAATTCTTTTAATTCATTGGGAGATCAAGTTTTATATCTCTGGAATACGTTTTTGCAATTCCACAGGTTTAACAAAACGAAGATACTGGAATACTTGCGTGACACATGGGCTAAAGATAGAAGAGCTGAATGGTCAATATGGATGGTTTACTCTAAGGTTGAGATGCCTCATCACTTTCTAAATAGCGGGTTTGATGAGTCTTCCAATAGTGGTGGCCATAGGAGAGCTCCAAGTTTGTGGAAGCTGAATGATGATCCTGCACAGATTGCAGCTACGCGTGCTGAGCTTCATAGACGAAGTATTGCACAAATGAAGATTAACAATCGATCAATTCAAGACTTGCATATATTTGGAGATCCATCAAGCATTCCTATTGTTATTGTGGAGCGTGTCTTGAATGCCCCTAGGCGTACTAATAGTGAAAATTCTTACTTGAGACATTTGGATGTGTTAAATGCTCCTGGCTTGCAAAGTGTATATGGGTCAGAATCTGTAAACAAGCAATCTGGCTATAGCTCCTCAAAGAAAGGCCGTGTTTTGAAGATTGTTGTCTTTGTGCATGGCTTTCAGGGGCATCATCTGGATTTACGGCTCATTCGAAATCAATGGCTTTTGGTAGATCCCAAGGCAGAGTTTCTAATGTCAGAGGCAAACGAAGACAAAACATCCAGTGATTTCAGAGAAATGGGACAAAGGTTAGCTCAGGAAGTTATTACTTTCCTTAAGAAGAAAATGGATAAAGCTTCAAGATCTGGAAGCTTAGCGGATATTAAGCTTAGCTTTGTGGGACATTCTATTGGAAATGTCATAATAAGAACGGCACTAACAGGTAATGAAATCTTGGATTTCATGTTTTGCCTTATTTGCAGTTGGTGTGAGATATCGTCCATTGTTTTTGCAGAGGCTATGATGGAGCCATACCTTAGATACCTACACGTATATGTTTCTATATCGGGTCCGCACTTGGGGTATCTATACAGTTCAAACTCTTTATTTAACTCTGGGCTGTGGCTTTTGAAGAAGCTCAAGAACACTCAATGCATTCATCAACTTACTTTCACAGATGATCCAGACCTCCAAAATACATTCTTTTACCAGCTCTGTAAGAAGAAGACGCTAGAAAATTTCAAGCATATAATCCTGTTATCTTCACCACAGGTATCTTTCTCTCTCTTCCCTTCCCTACGGATTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004856 GO:0005975 GO:0005996 GO:0005997 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019321 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0046835 GO:0071704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3657 DUF676

Protein Analysis

743

Amino Acids

83.67

Weight (kDa)

6.96

Isoelectric Point (pI)

44.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3657	PF12394	148 - 212	8.2e-21	Protein FAM135
DUF676	PF05057	526 - 728	5e-41	Putative serine esterase (DUF676)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09980 AT1G09980 AT1G09980 AT1G58350 AT1G58350 AT1G58350 AT1G58350
fragaria_vesca	FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540
malus_domestica	MD08G1211000.v1.1 MD15G1398300.v1.1
prunus_persica	Prupe.1G542900_v2.0.a1
pyrus_communis	pycom08g18180
rosa_chinensis	RchiOBHm_Chr7g0232361
rosa_laevigata	RLG00000001352
rosa_multiflora	Rmu_sc0000222.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228420
rosa_rugosa	Rorug07G0272900 Rorug07G0273000
rosa_samantha	Rh7AG426700 Rh7BG400500 Rh7CG446500 Rh7DG418100
rosa_wichuraiana	Rw7G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	369
Acc36I	ACCTGC	1 cut(s)	722
Acc65I	GGTACC	1 cut(s)	186
AccB1I	GGYRCC	2 cut(s)	186, 1025
AccB7I	CCANNNNNTGG	2 cut(s)	210, 956
AccI	GTMKAC	2 cut(s)	622, 634
AccII	CGCG	1 cut(s)	1312
AciI	CCGC	7 cut(s)	86, 101, 151, 519, 1221, 1799, 1994
AclWI	GGATC	4 cut(s)	1283, 1385, 1649, 2096
AcoI	YGGCCR	1 cut(s)	1249
AcsI	RAATTY	6 cut(s)	530, 537, 907, 1036, 1459, 2158
AcuI	CTGAAG	1 cut(s)	711
AcyI	GRCGYC	1 cut(s)	366
AfaI	GTAC	3 cut(s)	188, 1032, 1447
AfiI	CCNNNNNNNGG	6 cut(s)	210, 272, 472, 473, 956, 2000
AflII	CTTAAG	1 cut(s)	1757
AflIII	ACRYGT	2 cut(s)	1310, 1969
AjnI	CCWGG	1 cut(s)	1495
Alw21I	GWGCWC	2 cut(s)	816, 1264
Alw26I	GTCTC	3 cut(s)	35, 405, 1465
AlwI	GGATC	4 cut(s)	1283, 1385, 1649, 2096
AlwNI	CAGNNNCTG	1 cut(s)	1526
AoxI	GGCC	3 cut(s)	98, 1249, 1564
ApeKI	GCWGC	4 cut(s)	497, 788, 917, 1304
ApoI	RAATTY	6 cut(s)	530, 537, 907, 1036, 1459, 2158
Asp718I	GGTACC	1 cut(s)	186
AspA2I	CCTAGG	1 cut(s)	1439
AspLEI	GCGC	1 cut(s)	980
AspS9I	GGNCC	1 cut(s)	1991
AsuC2I	CCSGG	1 cut(s)	74
AsuHPI	GGTGA	4 cut(s)	25, 193, 1010, 2178
AsuII	TTCGAA	2 cut(s)	535, 1633
AvaII	GGWCC	1 cut(s)	1991
AvrII	CCTAGG	1 cut(s)	1439
BaeGI	GKGCMC	1 cut(s)	236
BalI	TGGCCA	1 cut(s)	1251
BanI	GGYRCC	2 cut(s)	186, 1025
BanII	GRGCYC	2 cut(s)	816, 1264
BbsI	GAAGAC	3 cut(s)	1227, 1698, 2153
Bbv12I	GWGCWC	2 cut(s)	816, 1264
BbvI	GCAGC	4 cut(s)	509, 775, 929, 1316
BccI	CCATC	6 cut(s)	12, 177, 204, 1171, 1402, 1939
BceAI	ACGGC	4 cut(s)	1013, 1551, 1640, 1869
BciT130I	CCWGG	1 cut(s)	1497
BciVI	GTATCC	1 cut(s)	679
BclI	TGATCA	1 cut(s)	676
BcnI	CCSGG	1 cut(s)	74
BcoDI	GTCTC	3 cut(s)	35, 405, 1465
BfaI	CTAG	5 cut(s)	14, 744, 990, 1440, 2153
BfmI	CTRYAG	1 cut(s)	1546
BfrI	CTTAAG	1 cut(s)	1757
BfuAI	ACCTGC	1 cut(s)	722
BfuI	GTATCC	1 cut(s)	679
BglI	GCCNNNNNGGC	1 cut(s)	74
BglII	AGATCT	1 cut(s)	1784
BisI	GCNGC	6 cut(s)	101, 498, 519, 789, 918, 1305
BlnI	CCTAGG	1 cut(s)	1439
BlpI	GCTNAGC	3 cut(s)	1317, 1795, 1811
BlsI	GCNGC	6 cut(s)	102, 499, 520, 790, 919, 1306
Bme1390I	CCNGG	2 cut(s)	74, 1497
Bme18I	GGWCC	1 cut(s)	1991
BmgT120I	GGNCC	1 cut(s)	1991
BmiI	GGNNCC	4 cut(s)	188, 1027, 1950, 1992
BmrFI	CCNGG	2 cut(s)	74, 1497
BmsI	GCATC	8 cut(s)	19, 55, 496, 580, 771, 989, 1188, 1618
BpiI	GAAGAC	3 cut(s)	1227, 1698, 2153
BpmI	CTGGAG	2 cut(s)	222, 800
Bpu10I	CCTNAGC	1 cut(s)	1737
Bpu1102I	GCTNAGC	3 cut(s)	1317, 1795, 1811
Bpu14I	TTCGAA	2 cut(s)	535, 1633
BpuEI	CTTGAG	3 cut(s)	983, 1489, 2045
BpuMI	CCSGG	1 cut(s)	74
Bsa29I	ATCGAT	1 cut(s)	1360
BsaAI	YACGTR	1 cut(s)	1972
BsaBI	GATNNNNATC	2 cut(s)	510, 1015
BsaHI	GRCGYC	1 cut(s)	366
BsaI	GGTCTC	1 cut(s)	35
BsaJI	CCNNGG	2 cut(s)	1439, 1659
BsaXI	ACNNNNNCTCC	2 cut(s)	1047, 1077
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 272, 472, 473, 956, 2000
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	4 cut(s)	672, 1000, 1125, 1704
Bse8I	GATNNNNATC	2 cut(s)	510, 1015
BseBI	CCWGG	1 cut(s)	1497
BseCI	ATCGAT	1 cut(s)	1360
BseDI	CCNNGG	2 cut(s)	1439, 1659
BseGI	GGATG	7 cut(s)	23, 144, 188, 511, 1182, 1486, 1700
BseJI	GATNNNNATC	2 cut(s)	510, 1015
BseLI	CCNNNNNNNGG	6 cut(s)	210, 272, 472, 473, 956, 2000
BseMII	CTCAG	5 cut(s)	109, 347, 705, 1308, 1751
BseNI	ACTGG	4 cut(s)	672, 1000, 1125, 1704
BseRI	GAGGAG	1 cut(s)	1543
BseSI	GKGCMC	1 cut(s)	236
BseXI	GCAGC	4 cut(s)	509, 775, 929, 1316
BsgI	GTGCAG	2 cut(s)	768, 1278
Bsh1236I	CGCG	1 cut(s)	1312
BshFI	GGCC	3 cut(s)	100, 1251, 1566
BshNI	GGYRCC	2 cut(s)	186, 1025
BshVI	ATCGAT	1 cut(s)	1360
BsiHKAI	GWGCWC	2 cut(s)	816, 1264
BsiSI	CCGG	2 cut(s)	74, 104
BslFI	GGGAC	2 cut(s)	1737, 1836
BslI	CCNNNNNNNGG	6 cut(s)	210, 272, 472, 473, 956, 2000
BsmAI	GTCTC	3 cut(s)	35, 405, 1465
BsmFI	GGGAC	2 cut(s)	1737, 1836
BsmI	GAATGC	4 cut(s)	565, 1401, 1438, 2076
BsnI	GGCC	3 cut(s)	100, 1251, 1566
Bso31I	GGTCTC	1 cut(s)	35
Bsp119I	TTCGAA	2 cut(s)	535, 1633
Bsp1286I	GDGCHC	3 cut(s)	236, 816, 1264
Bsp1720I	GCTNAGC	3 cut(s)	1317, 1795, 1811
BspACI	CCGC	7 cut(s)	86, 101, 151, 519, 1221, 1799, 1994
BspANI	GGCC	3 cut(s)	100, 1251, 1566
BspCNI	CTCAG	5 cut(s)	108, 346, 706, 1309, 1750
BspDI	ATCGAT	1 cut(s)	1360
BspFNI	CGCG	1 cut(s)	1312
BspHI	TCATGA	1 cut(s)	381
BspLI	GGNNCC	4 cut(s)	188, 1027, 1950, 1992
BspMI	ACCTGC	1 cut(s)	722
BspPI	GGATC	4 cut(s)	1283, 1385, 1649, 2096
BspQI	GCTCTTC	2 cut(s)	804, 1150
BspT104I	TTCGAA	2 cut(s)	535, 1633
BspT107I	GGYRCC	2 cut(s)	186, 1025
BspTI	CTTAAG	1 cut(s)	1757
BspTNI	GGTCTC	1 cut(s)	35
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	4 cut(s)	672, 1000, 1125, 1704
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	2 cut(s)	1439, 1659
BssNAI	GTATAC	1 cut(s)	623
BssNI	GRCGYC	1 cut(s)	366
BssT1I	CCWWGG	2 cut(s)	1439, 1659
Bst1107I	GTATAC	1 cut(s)	623
Bst2UI	CCWGG	1 cut(s)	1497
Bst4CI	ACNGT	2 cut(s)	221, 2015
Bst6I	CTCTTC	3 cut(s)	804, 1150, 2213
BstACI	GRCGYC	1 cut(s)	366
BstAFI	CTTAAG	1 cut(s)	1757
BstAPI	GCANNNNNTGC	1 cut(s)	1301
BstBAI	YACGTR	1 cut(s)	1972
BstBI	TTCGAA	2 cut(s)	535, 1633
BstC8I	GCNNGC	5 cut(s)	462, 495, 947, 1314, 1502
BstF5I	GGATG	7 cut(s)	23, 144, 188, 511, 1182, 1486, 1700
BstFNI	CGCG	1 cut(s)	1312
BstHHI	GCGC	1 cut(s)	980
BstMAI	GTCTC	3 cut(s)	35, 405, 1465
BstMWI	GCNNNNNNNGC	9 cut(s)	74, 506, 515, 811, 977, 1301, 1313, 1318, 1899
BstNI	CCWGG	1 cut(s)	1497
BstNSI	RCATGY	1 cut(s)	464
BstSCI	CCNGG	2 cut(s)	72, 1495
BstSFI	CTRYAG	1 cut(s)	1546
BstSLI	GKGCMC	1 cut(s)	236
BstUI	CGCG	1 cut(s)	1312
BstV1I	GCAGC	4 cut(s)	509, 775, 929, 1316
BstV2I	GAAGAC	3 cut(s)	1227, 1698, 2153
BstX2I	RGATCY	3 cut(s)	1390, 1654, 1784
BstXI	CCANNNNNNTGG	1 cut(s)	1272
BstYI	RGATCY	3 cut(s)	1390, 1654, 1784
BstZ17I	GTATAC	1 cut(s)	623
Bsu15I	ATCGAT	1 cut(s)	1360
BsuI	GTATCC	1 cut(s)	679
BsuRI	GGCC	3 cut(s)	100, 1251, 1566
BsuTUI	ATCGAT	1 cut(s)	1360
BtsCI	GGATG	7 cut(s)	23, 144, 188, 511, 1182, 1486, 1700
BtsI	GCAGTG	1 cut(s)	684
BtsIMutI	CAGTG	5 cut(s)	226, 609, 679, 684, 1711
BveI	ACCTGC	1 cut(s)	722
Cac8I	GCNNGC	5 cut(s)	462, 495, 947, 1314, 1502
CaiI	CAGNNNCTG	1 cut(s)	1526
CciI	TCATGA	1 cut(s)	381
CfoI	GCGC	1 cut(s)	980
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	1 cut(s)	1991
ClaI	ATCGAT	1 cut(s)	1360
CseI	GACGC	2 cut(s)	128, 2158
Csp6I	GTAC	3 cut(s)	187, 1031, 1446
CspCI	CAANNNNNGTGG	2 cut(s)	1228, 1263
CviAII	CATG	8 cut(s)	205, 382, 461, 527, 766, 1140, 1595, 1885
CviQI	GTAC	3 cut(s)	187, 1031, 1446
EaeI	YGGCCR	1 cut(s)	1249
Eam1104I	CTCTTC	3 cut(s)	804, 1150, 2213
EarI	CTCTTC	3 cut(s)	804, 1150, 2213
EciI	GGCGGA	1 cut(s)	75
Ecl136II	GAGCTC	2 cut(s)	814, 1262
Eco130I	CCWWGG	2 cut(s)	1439, 1659
Eco24I	GRGCYC	2 cut(s)	816, 1264
Eco31I	GGTCTC	1 cut(s)	35
Eco32I	GATATC	2 cut(s)	387, 1917
Eco47I	GGWCC	1 cut(s)	1991
Eco53kI	GAGCTC	2 cut(s)	814, 1262
Eco57I	CTGAAG	1 cut(s)	711
EcoICRI	GAGCTC	2 cut(s)	814, 1262
EcoRI	GAATTC	2 cut(s)	537, 1036
EcoRII	CCWGG	1 cut(s)	1495
EcoRV	GATATC	2 cut(s)	387, 1917
EcoT14I	CCWWGG	2 cut(s)	1439, 1659
EcoT22I	ATGCAT	2 cut(s)	462, 2078
EcoT38I	GRGCYC	2 cut(s)	816, 1264
ErhI	CCWWGG	2 cut(s)	1439, 1659
FaeI	CATG	8 cut(s)	208, 385, 464, 530, 769, 1143, 1598, 1888
FalI	AAGNNNNNCTT	2 cut(s)	1799, 1831
FaqI	GGGAC	2 cut(s)	1737, 1836
FatI	CATG	8 cut(s)	204, 381, 460, 526, 765, 1139, 1594, 1884
FauI	CCCGC	1 cut(s)	1214
FbaI	TGATCA	1 cut(s)	676
FblI	GTMKAC	2 cut(s)	622, 634
Fnu4HI	GCNGC	6 cut(s)	101, 498, 519, 789, 918, 1305
FokI	GGATG	7 cut(s)	30, 131, 195, 518, 1189, 1493, 1687
FriOI	GRGCYC	2 cut(s)	816, 1264
Fsp4HI	GCNGC	6 cut(s)	101, 498, 519, 789, 918, 1305
FspBI	CTAG	5 cut(s)	14, 744, 990, 1440, 2153
GlaI	GCGC	1 cut(s)	979
GluI	GCNGC	6 cut(s)	101, 498, 519, 789, 918, 1305
GsuI	CTGGAG	2 cut(s)	222, 800
HaeIII	GGCC	3 cut(s)	100, 1251, 1566
HapII	CCGG	2 cut(s)	74, 104
HgaI	GACGC	2 cut(s)	128, 2158
HhaI	GCGC	1 cut(s)	980
Hin1I	GRCGYC	1 cut(s)	366
Hin1II	CATG	8 cut(s)	208, 385, 464, 530, 769, 1143, 1598, 1888
Hin6I	GCGC	1 cut(s)	978
HinP1I	GCGC	1 cut(s)	978
HindIII	AAGCTT	3 cut(s)	1776, 1792, 1808
HinfI	GANTC	6 cut(s)	716, 752, 890, 986, 1232, 1523
HpaII	CCGG	2 cut(s)	74, 104
HphI	GGTGA	4 cut(s)	25, 193, 1010, 2178
Hpy166II	GTNNAC	4 cut(s)	623, 635, 1183, 1531
Hpy188I	TCNGA	7 cut(s)	280, 487, 715, 985, 1522, 1681, 1715
Hpy8I	GTNNAC	4 cut(s)	623, 635, 1183, 1531
HpyAV	CCTTC	3 cut(s)	658, 686, 2223
HpyCH4III	ACNGT	2 cut(s)	221, 2015
HpyCH4IV	ACGT	3 cut(s)	366, 1082, 1971
HpyF10VI	GCNNNNNNNGC	9 cut(s)	74, 506, 515, 811, 977, 1301, 1313, 1318, 1899
HpySE526I	ACGT	3 cut(s)	366, 1082, 1971
Hsp92I	GRCGYC	1 cut(s)	366
Hsp92II	CATG	8 cut(s)	208, 385, 464, 530, 769, 1143, 1598, 1888
HspAI	GCGC	1 cut(s)	978
KpnI	GGTACC	1 cut(s)	190
Ksp22I	TGATCA	1 cut(s)	676
LguI	GCTCTTC	2 cut(s)	804, 1150
LmnI	GCTCC	8 cut(s)	268, 649, 819, 1267, 1420, 1498, 1556, 1948
Lsp1109I	GCAGC	4 cut(s)	509, 775, 929, 1316
LweI	GCATC	8 cut(s)	19, 55, 496, 580, 771, 989, 1188, 1618
MaeI	CTAG	5 cut(s)	14, 744, 990, 1440, 2153
MaeII	ACGT	3 cut(s)	366, 1082, 1971
MaeIII	GTNAC	2 cut(s)	221, 1133
MflI	RGATCY	3 cut(s)	1390, 1654, 1784
MhlI	GDGCHC	3 cut(s)	236, 816, 1264
MlsI	TGGCCA	1 cut(s)	1251
MluI	ACGCGT	1 cut(s)	1310
MluNI	TGGCCA	1 cut(s)	1251
MlyI	GAGTC	3 cut(s)	725, 746, 1241
MmeI	TCCRAC	2 cut(s)	96, 199
Mox20I	TGGCCA	1 cut(s)	1251
Mph1103I	ATGCAT	2 cut(s)	462, 2078
MscI	TGGCCA	1 cut(s)	1251
MseI	TTAA	9 cut(s)	195, 774, 1044, 1104, 1353, 1487, 1758, 1806, 2031
MslI	CAYNNNNRTG	3 cut(s)	588, 1479, 1974
Msp20I	TGGCCA	1 cut(s)	1251
MspA1I	CMGCKG	1 cut(s)	521
MspCI	CTTAAG	1 cut(s)	1757
MspI	CCGG	2 cut(s)	74, 104
MspR9I	CCNGG	2 cut(s)	74, 1497
Mva1269I	GAATGC	4 cut(s)	565, 1401, 1438, 2076
MvaI	CCWGG	1 cut(s)	1497
MvnI	CGCG	1 cut(s)	1312
MwoI	GCNNNNNNNGC	9 cut(s)	74, 506, 515, 811, 977, 1301, 1313, 1318, 1899
NciI	CCSGG	1 cut(s)	74
NlaIII	CATG	8 cut(s)	208, 385, 464, 530, 769, 1143, 1598, 1888
NlaIV	GGNNCC	4 cut(s)	188, 1027, 1950, 1992
NmuCI	GTSAC	2 cut(s)	221, 1133
NsiI	ATGCAT	2 cut(s)	462, 2078
NspI	RCATGY	1 cut(s)	464
NspV	TTCGAA	2 cut(s)	535, 1633
PaeI	GCATGC	1 cut(s)	464
PagI	TCATGA	1 cut(s)	381
PciSI	GCTCTTC	2 cut(s)	804, 1150
PcsI	WCGNNNNNNNCGW	1 cut(s)	1630
PctI	GAATGC	4 cut(s)	565, 1401, 1438, 2076
PfeI	GAWTC	3 cut(s)	890, 986, 1523
PflMI	CCANNNNNTGG	2 cut(s)	210, 956
PkrI	GCNGC	6 cut(s)	102, 499, 520, 790, 919, 1306
PleI	GAGTC	3 cut(s)	724, 746, 1240
PpsI	GAGTC	3 cut(s)	724, 746, 1240
Ppu21I	YACGTR	1 cut(s)	1972
Psp124BI	GAGCTC	2 cut(s)	816, 1264
Psp6I	CCWGG	1 cut(s)	1495
PspGI	CCWGG	1 cut(s)	1495
PspN4I	GGNNCC	4 cut(s)	188, 1027, 1950, 1992
PspPI	GGNCC	1 cut(s)	1991
PstNI	CAGNNNCTG	1 cut(s)	1526
PsuI	RGATCY	3 cut(s)	1390, 1654, 1784
RsaI	GTAC	3 cut(s)	188, 1032, 1447
RsaNI	GTAC	3 cut(s)	187, 1031, 1446
RseI	CAYNNNNRTG	3 cut(s)	588, 1479, 1974
SacI	GAGCTC	2 cut(s)	816, 1264
SapI	GCTCTTC	2 cut(s)	804, 1150
SaqAI	TTAA	9 cut(s)	195, 774, 1044, 1104, 1353, 1487, 1758, 1806, 2031
SatI	GCNGC	6 cut(s)	101, 498, 519, 789, 918, 1305
Sau96I	GGNCC	1 cut(s)	1991
SchI	GAGTC	3 cut(s)	725, 746, 1241
ScrFI	CCNGG	2 cut(s)	74, 1497
SduI	GDGCHC	3 cut(s)	236, 816, 1264
SfaNI	GCATC	8 cut(s)	19, 55, 496, 580, 771, 989, 1188, 1618
SfcI	CTRYAG	1 cut(s)	1546
SfuI	TTCGAA	2 cut(s)	535, 1633
SgrAI	CRCCGGYG	1 cut(s)	103
SinI	GGWCC	1 cut(s)	1991
SmiMI	CAYNNNNRTG	3 cut(s)	588, 1479, 1974
SmlI	CTYRAG	4 cut(s)	962, 1468, 1757, 2060
SmoI	CTYRAG	4 cut(s)	962, 1468, 1757, 2060
SphI	GCATGC	1 cut(s)	464
SsiI	CCGC	7 cut(s)	86, 101, 151, 519, 1221, 1799, 1994
SspMI	CTAG	5 cut(s)	14, 744, 990, 1440, 2153
SstI	GAGCTC	2 cut(s)	816, 1264
StyD4I	CCNGG	2 cut(s)	72, 1495
StyI	CCWWGG	2 cut(s)	1439, 1659
TaaI	ACNGT	2 cut(s)	221, 2015
TaiI	ACGT	3 cut(s)	369, 1085, 1974
TaqI	TCGA	5 cut(s)	165, 535, 662, 1360, 1633
TauI	GCSGC	2 cut(s)	103, 521
TfiI	GAWTC	3 cut(s)	890, 986, 1523
Tru1I	TTAA	9 cut(s)	195, 774, 1044, 1104, 1353, 1487, 1758, 1806, 2031
Tru9I	TTAA	9 cut(s)	195, 774, 1044, 1104, 1353, 1487, 1758, 1806, 2031
TscAI	CASTG	5 cut(s)	226, 609, 679, 691, 1711
TseFI	GTSAC	2 cut(s)	221, 1133
TseI	GCWGC	4 cut(s)	497, 788, 917, 1304
Tsp45I	GTSAC	2 cut(s)	221, 1133
TspRI	CASTG	5 cut(s)	226, 609, 679, 691, 1711
Van91I	CCANNNNNTGG	2 cut(s)	210, 956
Vha464I	CTTAAG	1 cut(s)	1757
VpaK11BI	GGWCC	1 cut(s)	1991
XapI	RAATTY	6 cut(s)	530, 537, 907, 1036, 1459, 2158
XbaI	TCTAGA	1 cut(s)	989
XceI	RCATGY	1 cut(s)	464
XmaJI	CCTAGG	1 cut(s)	1439
XmiI	GTMKAC	2 cut(s)	622, 634
XspI	CTAG	5 cut(s)	14, 744, 990, 1440, 2153
ZraI	GACGTC	1 cut(s)	367
Zsp2I	ATGCAT	2 cut(s)	462, 2078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.