Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002474

Physical Location & Seq

Genomic Coordinates Forward (+)

44503695 .. 44513343

Gene Structure 9649 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG400500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGAGATGGGAGGACAGTGACTTTATGGGCACTCCAGCAAGAGTTGTTCAATATGAAGCTCCCGATCTTGGTTCTGATGATGTATATGGAGTATGGAGGATAGATGATACAGACAACAGCTTCTCAACTCAGCCTTTTCGTATCAAATATGCAAGGCAGGACGTCTTTTTATCAATCATGATATCGTTCAATATGTCTCTTGCTGGAAATGAGGGTCTATCCTCATCTGCTGTTCTTTTGAAGTTTGAGTTTATGCATGCCCCCATATCGGGAAATAGGTCTGACTTGCAGGCAGCTCTGGATGCTAACCCTGCCGCTGTCCATGAATTTCGAATTCCTCCTAAAGCTCTTTTGGGTTTGCATTCATATTGCCCTGTTCATTTTGATGCATTCCATTCAGTGCTTGTTGATGTTAGTATACACATCAGTCTACTAAAAGCTCCTTACAAACATCAATCGAAGGTATCCAGTGATCGTAGCATTGCTGAAGGTGTTGGTGGAGAAACTTCTGAGTCAAATCAAGAAGCAGGTCAAGTAGCTAGTGCAGACTCTAATGGCATCATGCTTCTTAAATCATTGTTAGCTGCTCGTAGCATACTGCTTGAAGAGCTCCAGACACTTAGCAAGGCTCTTGACCAAGAAATTGATTTGACTGATTTTATTTCTAAAATGGATTATACGAATGATTCTTTCCTGCAAGAAAATTTGGTTGCAGCAGATGACAAAGTTTCAGGACAAGGCAAGCCACAAAATGGTCTTGAGAAAGCAAATGGCGCATCAGATTCTAGAACTGGTGAATTGCCACAATCTATATCAAGGGGTGCCGTACTGAATTCTTTTAATTCATTGGGAGATCAAGTTTTATATCTCTGGAATACTTTTTTGCAATTCCACAGGTTTAACAAAACGAAGATACTGGAATACTTGCGTGACACATGGGCTAAAGATAGAAGAGCTGAATGGTCAATATGGATGGTTTACTCTAAGGTTGAGATGCCTCATCACTTTCTAAATAGCGGGTTTGATGAGTCTTCCAATAGTGGTGGCCATAGAAGAGCTCCAAGTTTGTGGAAGCTGAATGATGATCCTGCACAGATTGCAGCTACCCGTGCTGAGCTTCATAGACGAAGTATTGCACAAATGAAGATTAACAATCGATCAATTCAAGACTTGCATATATTTGGAGATCCATCAAGCATTCCTATTGTTATTGTGGAGCGTGTCTTGAATGCACCTAGGCGTACTAATAGTGAAAATTCTTACTTGAGACATTTGGATGTGTTAAATTCTCCTGGCTTGCAAAGTGTATATGGGTCAGAATCTGTAAACAAGCAATCTGGCTATAGCTCCTCAAAGAAAGGCCGTGTTTTGAAGATTGTTGTCTTTGTGCATGGCTTTCAGGGGCATCATCTGGATTTACGGCTCATTCGAAATCAATGGCTTTTGGTAGATCCCAAGGCAGAGTTTCTAATGTCAGAGGCAAACGAAGACAAAACATCCAGTGATTTCAGAGAAATGGGACAAAGGTTAGCTCAGGAAGTTATTACTTTCCTTAAGAAGAAAATGGATAAAGCTTCAAGATCTGGAAGCTTAGCGGATATTAAGCTTAGCTTTGTGGGACATTCTATTGGAAATGTCATAATAAGAACGGCACTAACAGAGGCTATGATGGAGCCATACCTTAGATTCCTACACGTATATGTTTCTATATCGGGTCCACACTTGGGGTATCTATACAGTTCAAACTCTTTATTTAACTCTGGGCTGTGGCTTTTGAAGAAGCTCAAGAACACTCAATGCATTCATCAACTTACTTTCACAGATGATCCAGACCTCCAAAATACATTCTTTTACCAGCTCTGTAAGAAGAAGACGCTAGAAAATTTCAAGCATATAATCCTGTTGTCTTCACCACAGGATGGTTACGTTCCTTACCATTCTGCCAGAATAGATATGTGCCAAGCTGCTTCATTAGACTTTTCCAAAAGGGGCAAAGTTTTTTTGGAAATGCTGAACGACTGCTTGGACCAAATACGGTCTCCTCGCTTGGAGAATCGAGTGTTCATGCGCTGTGACGTCAACTTTGACACCTCTTCATATGGAAAGAACTTGAACTCATTCATCGGAAGGGCCGCCCATATTGATTTTTTGGAATCTGACATTTTTGCAAGATTCCTCATGTGGTCTTTCCCAGACCTATTTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004856 GO:0005975 GO:0005996 GO:0005997 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019321 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0046835 GO:0071704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3657 DUF676

Protein Analysis

735

Amino Acids

83.05

Weight (kDa)

6.67

Isoelectric Point (pI)

42.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3657	PF12394	80 - 144	3.3e-19	Protein FAM135
DUF676	PF05057	458 - 653	1.4e-47	Putative serine esterase (DUF676)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09980 AT1G09980 AT1G09980 AT1G58350 AT1G58350 AT1G58350 AT1G58350
fragaria_vesca	FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540
malus_domestica	MD08G1211000.v1.1 MD15G1398300.v1.1
prunus_persica	Prupe.1G542900_v2.0.a1
pyrus_communis	pycom08g18180
rosa_chinensis	RchiOBHm_Chr7g0232361
rosa_laevigata	RLG00000001352
rosa_multiflora	Rmu_sc0000222.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228420
rosa_rugosa	Rorug07G0272900 Rorug07G0273000
rosa_samantha	Rh7AG426700 Rh7BG400500 Rh7CG446500 Rh7DG418100
rosa_wichuraiana	Rw7G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	165, 2079
Acc36I	ACCTGC	1 cut(s)	518
AccB1I	GGYRCC	1 cut(s)	821
AccB7I	CCANNNNNTGG	2 cut(s)	752, 1919
AccI	GTMKAC	2 cut(s)	418, 430
AciI	CCGC	4 cut(s)	315, 1017, 1595, 2133
AclWI	GGATC	4 cut(s)	1079, 1181, 1445, 1820
AcoI	YGGCCR	1 cut(s)	1045
AcsI	RAATTY	7 cut(s)	326, 333, 703, 832, 1255, 1285, 1882
AcuI	CTGAAG	1 cut(s)	507
AcyI	GRCGYC	2 cut(s)	162, 2076
AfaI	GTAC	2 cut(s)	828, 1243
AfiI	CCNNNNNNNGG	6 cut(s)	68, 268, 269, 752, 1724, 1919
AflII	CTTAAG	1 cut(s)	1553
AflIII	ACRYGT	1 cut(s)	1693
AjnI	CCWGG	1 cut(s)	1291
AjuI	GAANNNNNNNTTGG	2 cut(s)	2006, 2038
Alw21I	GWGCWC	2 cut(s)	612, 1060
Alw26I	GTCTC	3 cut(s)	201, 1261, 2043
AlwI	GGATC	4 cut(s)	1079, 1181, 1445, 1820
AlwNI	CAGNNNCTG	1 cut(s)	1322
AoxI	GGCC	3 cut(s)	1045, 1360, 2130
ApeKI	GCWGC	5 cut(s)	293, 584, 713, 1100, 1964
ApoI	RAATTY	7 cut(s)	326, 333, 703, 832, 1255, 1285, 1882
ArsI	GACNNNNNNTTYG	2 cut(s)	2066, 2098
Asp700I	GAANNNNTTC	1 cut(s)	2117
AspA2I	CCTAGG	1 cut(s)	1235
AspLEI	GCGC	2 cut(s)	776, 2070
AspS9I	GGNCC	3 cut(s)	1715, 2026, 2130
AsuHPI	GGTGA	2 cut(s)	806, 1902
AsuII	TTCGAA	2 cut(s)	331, 1429
AvaII	GGWCC	2 cut(s)	1715, 2026
AvrII	CCTAGG	1 cut(s)	1235
BaeGI	GKGCMC	1 cut(s)	32
BalI	TGGCCA	1 cut(s)	1047
BanI	GGYRCC	1 cut(s)	821
BanII	GRGCYC	2 cut(s)	612, 1060
BbsI	GAAGAC	4 cut(s)	1023, 1494, 1877, 1899
Bbv12I	GWGCWC	2 cut(s)	612, 1060
BbvI	GCAGC	5 cut(s)	305, 571, 725, 1112, 1951
BccI	CCATC	4 cut(s)	967, 1198, 1663, 1913
BceAI	ACGGC	4 cut(s)	809, 1347, 1436, 1665
BciT130I	CCWGG	1 cut(s)	1293
BciVI	GTATCC	1 cut(s)	475
BcoDI	GTCTC	3 cut(s)	201, 1261, 2043
BfaI	CTAG	4 cut(s)	540, 786, 1236, 1877
BfmI	CTRYAG	1 cut(s)	1342
BfrI	CTTAAG	1 cut(s)	1553
BfuAI	ACCTGC	1 cut(s)	518
BfuI	GTATCC	1 cut(s)	475
BglII	AGATCT	1 cut(s)	1580
BisI	GCNGC	7 cut(s)	294, 315, 585, 714, 1101, 1965, 2133
BlnI	CCTAGG	1 cut(s)	1235
BlpI	GCTNAGC	3 cut(s)	1113, 1591, 1607
BlsI	GCNGC	7 cut(s)	295, 316, 586, 715, 1102, 1966, 2134
Bme1390I	CCNGG	1 cut(s)	1293
Bme18I	GGWCC	2 cut(s)	1715, 2026
BmgT120I	GGNCC	3 cut(s)	1715, 2026, 2130
BmiI	GGNNCC	3 cut(s)	823, 1674, 1716
BmrFI	CCNGG	1 cut(s)	1293
BmsI	GCATC	6 cut(s)	292, 376, 567, 785, 984, 1414
BpiI	GAAGAC	4 cut(s)	1023, 1494, 1877, 1899
BpmI	CTGGAG	2 cut(s)	18, 596
Bpu10I	CCTNAGC	1 cut(s)	1533
Bpu1102I	GCTNAGC	3 cut(s)	1113, 1591, 1607
Bpu14I	TTCGAA	2 cut(s)	331, 1429
BpuEI	CTTGAG	3 cut(s)	779, 1285, 1769
Bsa29I	ATCGAT	1 cut(s)	1156
BsaAI	YACGTR	1 cut(s)	1696
BsaHI	GRCGYC	2 cut(s)	162, 2076
BsaI	GGTCTC	1 cut(s)	2043
BsaJI	CCNNGG	2 cut(s)	1235, 1455
BsaXI	ACNNNNNCTCC	2 cut(s)	843, 873
Bsc4I	CCNNNNNNNGG	6 cut(s)	68, 268, 269, 752, 1724, 1919
Bse1I	ACTGG	4 cut(s)	468, 796, 921, 1500
Bse3DI	GCAATG	1 cut(s)	480
BseBI	CCWGG	1 cut(s)	1293
BseCI	ATCGAT	1 cut(s)	1156
BseDI	CCNNGG	2 cut(s)	1235, 1455
BseGI	GGATG	5 cut(s)	307, 978, 1282, 1496, 1924
BseLI	CCNNNNNNNGG	6 cut(s)	68, 268, 269, 752, 1724, 1919
BseMI	GCAATG	1 cut(s)	480
BseMII	CTCAG	4 cut(s)	143, 501, 1104, 1547
BseNI	ACTGG	4 cut(s)	468, 796, 921, 1500
BseRI	GAGGAG	2 cut(s)	1339, 2031
BseSI	GKGCMC	1 cut(s)	32
BseXI	GCAGC	5 cut(s)	305, 571, 725, 1112, 1951
BsgI	GTGCAG	2 cut(s)	564, 1074
BshFI	GGCC	3 cut(s)	1047, 1362, 2132
BshNI	GGYRCC	1 cut(s)	821
BshVI	ATCGAT	1 cut(s)	1156
BsiHKAI	GWGCWC	2 cut(s)	612, 1060
BslFI	GGGAC	2 cut(s)	1533, 1632
BslI	CCNNNNNNNGG	6 cut(s)	68, 268, 269, 752, 1724, 1919
BsmAI	GTCTC	3 cut(s)	201, 1261, 2043
BsmFI	GGGAC	2 cut(s)	1533, 1632
BsmI	GAATGC	5 cut(s)	361, 389, 1197, 1234, 1800
BsnI	GGCC	3 cut(s)	1047, 1362, 2132
Bso31I	GGTCTC	1 cut(s)	2043
Bsp119I	TTCGAA	2 cut(s)	331, 1429
Bsp1286I	GDGCHC	3 cut(s)	32, 612, 1060
Bsp143I	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
Bsp1720I	GCTNAGC	3 cut(s)	1113, 1591, 1607
BspACI	CCGC	4 cut(s)	315, 1017, 1595, 2133
BspANI	GGCC	3 cut(s)	1047, 1362, 2132
BspCNI	CTCAG	4 cut(s)	142, 502, 1105, 1546
BspDI	ATCGAT	1 cut(s)	1156
BspHI	TCATGA	1 cut(s)	177
BspLI	GGNNCC	3 cut(s)	823, 1674, 1716
BspMI	ACCTGC	1 cut(s)	518
BspPI	GGATC	4 cut(s)	1079, 1181, 1445, 1820
BspQI	GCTCTTC	3 cut(s)	600, 946, 1048
BspT104I	TTCGAA	2 cut(s)	331, 1429
BspT107I	GGYRCC	1 cut(s)	821
BspTI	CTTAAG	1 cut(s)	1553
BspTNI	GGTCTC	1 cut(s)	2043
BsrDI	GCAATG	1 cut(s)	480
BsrI	ACTGG	4 cut(s)	468, 796, 921, 1500
BssECI	CCNNGG	2 cut(s)	1235, 1455
BssMI	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
BssNAI	GTATAC	1 cut(s)	419
BssNI	GRCGYC	2 cut(s)	162, 2076
BssT1I	CCWWGG	2 cut(s)	1235, 1455
Bst1107I	GTATAC	1 cut(s)	419
Bst2UI	CCWGG	1 cut(s)	1293
Bst4CI	ACNGT	3 cut(s)	17, 1739, 2037
Bst6I	CTCTTC	4 cut(s)	600, 946, 1048, 2098
BstACI	GRCGYC	2 cut(s)	162, 2076
BstAFI	CTTAAG	1 cut(s)	1553
BstAPI	GCANNNNNTGC	1 cut(s)	1097
BstBAI	YACGTR	1 cut(s)	1696
BstBI	TTCGAA	2 cut(s)	331, 1429
BstC8I	GCNNGC	4 cut(s)	258, 291, 743, 1298
BstDEI	CTNAG	9 cut(s)	129, 510, 620, 984, 1113, 1533, 1591, 1607, 1682
BstF5I	GGATG	5 cut(s)	307, 978, 1282, 1496, 1924
BstHHI	GCGC	2 cut(s)	776, 2070
BstKTI	GATC	9 cut(s)	67, 475, 856, 1087, 1160, 1189, 1453, 1583, 1828
BstMAI	GTCTC	3 cut(s)	201, 1261, 2043
BstMBI	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
BstMWI	GCNNNNNNNGC	6 cut(s)	302, 311, 607, 773, 1097, 1109
BstNI	CCWGG	1 cut(s)	1293
BstNSI	RCATGY	1 cut(s)	260
BstSCI	CCNGG	1 cut(s)	1291
BstSFI	CTRYAG	1 cut(s)	1342
BstSLI	GKGCMC	1 cut(s)	32
BstV1I	GCAGC	5 cut(s)	305, 571, 725, 1112, 1951
BstV2I	GAAGAC	4 cut(s)	1023, 1494, 1877, 1899
BstX2I	RGATCY	3 cut(s)	1186, 1450, 1580
BstXI	CCANNNNNNTGG	1 cut(s)	1068
BstYI	RGATCY	3 cut(s)	1186, 1450, 1580
BstZ17I	GTATAC	1 cut(s)	419
Bsu15I	ATCGAT	1 cut(s)	1156
BsuI	GTATCC	1 cut(s)	475
BsuRI	GGCC	3 cut(s)	1047, 1362, 2132
BsuTUI	ATCGAT	1 cut(s)	1156
BtsCI	GGATG	5 cut(s)	307, 978, 1282, 1496, 1924
BtsIMutI	CAGTG	4 cut(s)	22, 405, 475, 1507
BveI	ACCTGC	1 cut(s)	518
Cac8I	GCNNGC	4 cut(s)	258, 291, 743, 1298
CaiI	CAGNNNCTG	1 cut(s)	1322
CciI	TCATGA	1 cut(s)	177
CfoI	GCGC	2 cut(s)	776, 2070
Cfr13I	GGNCC	3 cut(s)	1715, 2026, 2130
ClaI	ATCGAT	1 cut(s)	1156
CseI	GACGC	1 cut(s)	1882
Csp6I	GTAC	2 cut(s)	827, 1242
CspCI	CAANNNNNGTGG	2 cut(s)	1024, 1059
CviAII	CATG	8 cut(s)	178, 257, 323, 562, 936, 1391, 2065, 2179
CviQI	GTAC	2 cut(s)	827, 1242
DdeI	CTNAG	9 cut(s)	129, 510, 620, 984, 1113, 1533, 1591, 1607, 1682
DpnI	GATC	9 cut(s)	66, 474, 855, 1086, 1159, 1188, 1452, 1582, 1827
DpnII	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
EaeI	YGGCCR	1 cut(s)	1045
Eam1104I	CTCTTC	4 cut(s)	600, 946, 1048, 2098
EarI	CTCTTC	4 cut(s)	600, 946, 1048, 2098
Ecl136II	GAGCTC	2 cut(s)	610, 1058
Eco130I	CCWWGG	2 cut(s)	1235, 1455
Eco24I	GRGCYC	2 cut(s)	612, 1060
Eco31I	GGTCTC	1 cut(s)	2043
Eco32I	GATATC	1 cut(s)	183
Eco47I	GGWCC	2 cut(s)	1715, 2026
Eco53kI	GAGCTC	2 cut(s)	610, 1058
Eco57I	CTGAAG	1 cut(s)	507
EcoICRI	GAGCTC	2 cut(s)	610, 1058
EcoRI	GAATTC	2 cut(s)	333, 832
EcoRII	CCWGG	1 cut(s)	1291
EcoRV	GATATC	1 cut(s)	183
EcoT14I	CCWWGG	2 cut(s)	1235, 1455
EcoT22I	ATGCAT	3 cut(s)	258, 391, 1802
EcoT38I	GRGCYC	2 cut(s)	612, 1060
ErhI	CCWWGG	2 cut(s)	1235, 1455
FaeI	CATG	8 cut(s)	181, 260, 326, 565, 939, 1394, 2068, 2182
FalI	AAGNNNNNCTT	2 cut(s)	1595, 1627
FaqI	GGGAC	2 cut(s)	1533, 1632
FatI	CATG	8 cut(s)	177, 256, 322, 561, 935, 1390, 2064, 2178
FauI	CCCGC	1 cut(s)	1010
FauNDI	CATATG	1 cut(s)	2098
FblI	GTMKAC	2 cut(s)	418, 430
Fnu4HI	GCNGC	7 cut(s)	294, 315, 585, 714, 1101, 1965, 2133
FokI	GGATG	5 cut(s)	314, 985, 1289, 1483, 1931
FriOI	GRGCYC	2 cut(s)	612, 1060
Fsp4HI	GCNGC	7 cut(s)	294, 315, 585, 714, 1101, 1965, 2133
FspBI	CTAG	4 cut(s)	540, 786, 1236, 1877
GlaI	GCGC	2 cut(s)	775, 2069
GluI	GCNGC	7 cut(s)	294, 315, 585, 714, 1101, 1965, 2133
GsuI	CTGGAG	2 cut(s)	18, 596
HaeIII	GGCC	3 cut(s)	1047, 1362, 2132
HgaI	GACGC	1 cut(s)	1882
HhaI	GCGC	2 cut(s)	776, 2070
Hin1I	GRCGYC	2 cut(s)	162, 2076
Hin1II	CATG	8 cut(s)	181, 260, 326, 565, 939, 1394, 2068, 2182
Hin6I	GCGC	2 cut(s)	774, 2068
HinP1I	GCGC	2 cut(s)	774, 2068
HincII	GTYRAC	1 cut(s)	2080
HindII	GTYRAC	1 cut(s)	2080
HindIII	AAGCTT	3 cut(s)	1572, 1588, 1604
HphI	GGTGA	2 cut(s)	806, 1902
Hpy166II	GTNNAC	6 cut(s)	419, 431, 979, 1327, 1718, 2080
Hpy188I	TCNGA	9 cut(s)	76, 283, 511, 781, 1318, 1477, 1511, 2126, 2158
Hpy8I	GTNNAC	6 cut(s)	419, 431, 979, 1327, 1718, 2080
HpyAV	CCTTC	3 cut(s)	454, 482, 2121
HpyCH4III	ACNGT	3 cut(s)	17, 1739, 2037
HpyCH4IV	ACGT	4 cut(s)	162, 1695, 1926, 2076
HpyF10VI	GCNNNNNNNGC	6 cut(s)	302, 311, 607, 773, 1097, 1109
HpyF3I	CTNAG	9 cut(s)	129, 510, 620, 984, 1113, 1533, 1591, 1607, 1682
HpySE526I	ACGT	4 cut(s)	162, 1695, 1926, 2076
Hsp92I	GRCGYC	2 cut(s)	162, 2076
Hsp92II	CATG	8 cut(s)	181, 260, 326, 565, 939, 1394, 2068, 2182
HspAI	GCGC	2 cut(s)	774, 2068
Kzo9I	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
LguI	GCTCTTC	3 cut(s)	600, 946, 1048
LmnI	GCTCC	7 cut(s)	64, 445, 615, 1063, 1216, 1352, 1672
Lsp1109I	GCAGC	5 cut(s)	305, 571, 725, 1112, 1951
LweI	GCATC	6 cut(s)	292, 376, 567, 785, 984, 1414
MaeI	CTAG	4 cut(s)	540, 786, 1236, 1877
MaeII	ACGT	4 cut(s)	162, 1695, 1926, 2076
MaeIII	GTNAC	4 cut(s)	17, 929, 1922, 2072
MalI	GATC	9 cut(s)	66, 474, 855, 1086, 1159, 1188, 1452, 1582, 1827
MboI	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
MflI	RGATCY	3 cut(s)	1186, 1450, 1580
MhlI	GDGCHC	3 cut(s)	32, 612, 1060
MlsI	TGGCCA	1 cut(s)	1047
MluNI	TGGCCA	1 cut(s)	1047
MlyI	GAGTC	3 cut(s)	521, 542, 1037
Mox20I	TGGCCA	1 cut(s)	1047
Mph1103I	ATGCAT	3 cut(s)	258, 391, 1802
MroXI	GAANNNNTTC	1 cut(s)	2117
MscI	TGGCCA	1 cut(s)	1047
MseI	TTAA	8 cut(s)	570, 840, 900, 1149, 1283, 1554, 1602, 1755
MslI	CAYNNNNRTG	3 cut(s)	384, 1275, 1698
Msp20I	TGGCCA	1 cut(s)	1047
MspA1I	CMGCKG	1 cut(s)	317
MspCI	CTTAAG	1 cut(s)	1553
MspR9I	CCNGG	1 cut(s)	1293
Mva1269I	GAATGC	5 cut(s)	361, 389, 1197, 1234, 1800
MvaI	CCWGG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	6 cut(s)	302, 311, 607, 773, 1097, 1109
NdeI	CATATG	1 cut(s)	2098
NdeII	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
NlaIII	CATG	8 cut(s)	181, 260, 326, 565, 939, 1394, 2068, 2182
NlaIV	GGNNCC	3 cut(s)	823, 1674, 1716
NmuCI	GTSAC	3 cut(s)	17, 929, 2072
NsiI	ATGCAT	3 cut(s)	258, 391, 1802
NspI	RCATGY	1 cut(s)	260
NspV	TTCGAA	2 cut(s)	331, 1429
PaeI	GCATGC	1 cut(s)	260
PagI	TCATGA	1 cut(s)	177
PciSI	GCTCTTC	3 cut(s)	600, 946, 1048
PcsI	WCGNNNNNNNCGW	1 cut(s)	1426
PctI	GAATGC	5 cut(s)	361, 389, 1197, 1234, 1800
PdmI	GAANNNNTTC	1 cut(s)	2117
PfeI	GAWTC	7 cut(s)	686, 782, 1319, 1686, 2053, 2153, 2172
PflMI	CCANNNNNTGG	2 cut(s)	752, 1919
PkrI	GCNGC	7 cut(s)	295, 316, 586, 715, 1102, 1966, 2134
PleI	GAGTC	3 cut(s)	520, 542, 1036
PpsI	GAGTC	3 cut(s)	520, 542, 1036
Ppu21I	YACGTR	1 cut(s)	1696
Psp124BI	GAGCTC	2 cut(s)	612, 1060
Psp6I	CCWGG	1 cut(s)	1291
PspGI	CCWGG	1 cut(s)	1291
PspN4I	GGNNCC	3 cut(s)	823, 1674, 1716
PspPI	GGNCC	3 cut(s)	1715, 2026, 2130
PstNI	CAGNNNCTG	1 cut(s)	1322
PsuI	RGATCY	3 cut(s)	1186, 1450, 1580
RsaI	GTAC	2 cut(s)	828, 1243
RsaNI	GTAC	2 cut(s)	827, 1242
RseI	CAYNNNNRTG	3 cut(s)	384, 1275, 1698
SacI	GAGCTC	2 cut(s)	612, 1060
SapI	GCTCTTC	3 cut(s)	600, 946, 1048
SaqAI	TTAA	8 cut(s)	570, 840, 900, 1149, 1283, 1554, 1602, 1755
SatI	GCNGC	7 cut(s)	294, 315, 585, 714, 1101, 1965, 2133
Sau3AI	GATC	9 cut(s)	64, 472, 853, 1084, 1157, 1186, 1450, 1580, 1825
Sau96I	GGNCC	3 cut(s)	1715, 2026, 2130
SchI	GAGTC	3 cut(s)	521, 542, 1037
ScrFI	CCNGG	1 cut(s)	1293
SduI	GDGCHC	3 cut(s)	32, 612, 1060
SfaNI	GCATC	6 cut(s)	292, 376, 567, 785, 984, 1414
SfcI	CTRYAG	1 cut(s)	1342
SfuI	TTCGAA	2 cut(s)	331, 1429
SinI	GGWCC	2 cut(s)	1715, 2026
SmiMI	CAYNNNNRTG	3 cut(s)	384, 1275, 1698
SmlI	CTYRAG	4 cut(s)	758, 1264, 1553, 1784
SmoI	CTYRAG	4 cut(s)	758, 1264, 1553, 1784
SphI	GCATGC	1 cut(s)	260
SsiI	CCGC	4 cut(s)	315, 1017, 1595, 2133
SspMI	CTAG	4 cut(s)	540, 786, 1236, 1877
SstI	GAGCTC	2 cut(s)	612, 1060
StyD4I	CCNGG	1 cut(s)	1291
StyI	CCWWGG	2 cut(s)	1235, 1455
TaaI	ACNGT	3 cut(s)	17, 1739, 2037
TaiI	ACGT	4 cut(s)	165, 1698, 1929, 2079
TaqI	TCGA	5 cut(s)	331, 458, 1156, 1429, 2056
TauI	GCSGC	2 cut(s)	317, 2135
TfiI	GAWTC	7 cut(s)	686, 782, 1319, 1686, 2053, 2153, 2172
Tru1I	TTAA	8 cut(s)	570, 840, 900, 1149, 1283, 1554, 1602, 1755
Tru9I	TTAA	8 cut(s)	570, 840, 900, 1149, 1283, 1554, 1602, 1755
TscAI	CASTG	4 cut(s)	22, 405, 475, 1507
TseFI	GTSAC	3 cut(s)	17, 929, 2072
TseI	GCWGC	5 cut(s)	293, 584, 713, 1100, 1964
Tsp45I	GTSAC	3 cut(s)	17, 929, 2072
TspRI	CASTG	4 cut(s)	22, 405, 475, 1507
Van91I	CCANNNNNTGG	2 cut(s)	752, 1919
Vha464I	CTTAAG	1 cut(s)	1553
VpaK11BI	GGWCC	2 cut(s)	1715, 2026
XapI	RAATTY	7 cut(s)	326, 333, 703, 832, 1255, 1285, 1882
XbaI	TCTAGA	1 cut(s)	785
XceI	RCATGY	1 cut(s)	260
XmaJI	CCTAGG	1 cut(s)	1235
XmiI	GTMKAC	2 cut(s)	418, 430
XmnI	GAANNNNTTC	1 cut(s)	2117
XspI	CTAG	4 cut(s)	540, 786, 1236, 1877
ZraI	GACGTC	2 cut(s)	163, 2077
Zsp2I	ATGCAT	3 cut(s)	258, 391, 1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.