Rroxscaffold_3G00228420

Protein FAM135B-like isoform X1

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
12826498 .. 12834564
8067 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00228420.1

Sequence Viewer

Length: 2496 bp
ATGTTTCGGCATCTAGGATGGCTGGTTGGTCTCACCTATAAATCCTCATCAAAGCGATTGGCAGATGCCAACCCGGCTCTGCCTCCGCCTCAACTCAGGCCGCCGGTGGCTATGTTGGACGCTGTTCAGGAGATCGCTATTTACATCCACCGCTTCCACAATCTAGATCTTTTCCAACAAGGATGGTACCAAATTAAGATCACGATGAGATGGGAGGACAGTGACTTATTGGGCACTCCAGCAAGAGTTGTTCAATATGAAGCTCCCGATCTTGGTTCTGATGATGTATATGGAGTATGGAGGATAGATGATACAGACAACAGCTTCTCAACTCAGCCTTTTCGTATCAAATATGCAAGGCAGGACGTCTTTTTATCAATCATGATATCATTCAATATGTCTCTTGCTGGAAATGAGGGTCTATCCTCATCTGCTGTTCTTTTGAAGTTTGAGCTTATGCATGCCCCCATATCGGCGAATAGGTCTGACTTGCAGGCAGCTCTGGATGCTAATCCTGCCGCTGTCCATGAATTTCGAATTCCTCCTAAAGCTCTTTTGGGTTTGCATTCATATTGCCCTGTTCATTTTGATGCGTTCCATTCAGTGCTTGTTGATGTTAGTATACACATCAGTCTACTAAAATCTCCTTACAAACATCAATTGAAGGTATCCAGTGATCGTAGCATTGCTGAAGGTGTTGGTGGAGAAACTTCTGAGTCAAATCAAGAAGCAGGTCAAGTAGCTAGTGCAGACTCTAATGGCATCATGCTTCTTAAATCATTGTTAGCTGCTCGTAGCATACTGCTTGAAGAGCTCCAGACATTTAGCAAGGCTCTTGACCAAGAAATTGATTTGACTGATTTTATTTCTAAAATGGATAACACGAATGATTCTTTCCTGCAAGAAAATTTGGTTGCAGCAGATGACAAAGTTTCAGGACAAGGCAAGCCACAAAATGGTCTTGAGAAAGCAAATGACGCATCAGATTCTAGAACTGGTGAATTGCCACGATCTATATCAAGGGGTGCCGTACTGAATTCTTTTAATTCATTGGGAGATCAAGTTTTATATCTCTGGAATACTTTTTGCAATTCCACAGTGTGTTTGAATTTCATGGAAGTCTTGAGTTCCATTGAAGGAAAATTGCTCGGGATGGACCTGCTGCAGTTTAACAAAACGAAGGTACTGGAATACTTGCGTGACACATGGGCTAAAGATAGAAGAGCTGAATGGTCAATATGGATGGTTTACTCTAAGGTTGAGATGCCTCATCACTTTCTAAATAGCGGGTTTGATGAGTCTTCCAATAGTGGTGGCCATAGAAGAGCTCCAAGTTTGTGGAAGCTGAATGATGATCCTGCACAGATTGCAGCTACCCGTGCTGAGCTTCATAGACGAAGTATTGCACAAATGAAGATTAACAATCGGTCAATTCAAGACTTGCATATATTTGGAGATCCATCAAGCATTCCTATTGTTATTGTGGAGCGTGTCTTGAATGCACCTAGGCGTACTAATAGTGAAAATTCTTACTTGAGACATTTGGATGTGTTAAATGCTCCTGGCTTGCAAAGTGTATATGGGTCAGAATCTGTGAACAAGCAATCTGGCTATAGCTCCTCAAAGAAAGGCCGTGTTTTGAAGATTGTTGTCTTTGGGCATCATCTGGATTTACGGCTCATTCGAAATCAATGGCTTTTGGTAGATCCCAAGGCAGAGTTTCTAATGTCAGAGGCAAACGAAGACAAAACATCCAGTGATTTCAGAGAAATGGGACAAAGGTTAGCTCAGGAAGTTATTACTTTCCTTAAGAAGAAAATGGATAAAGCTTCAAGATCTGGAAGCTTAGCGGATATTAAGCTTAGCTTTGTGGGACATTCTATTGGAAATGTCATAATAAGAACGGCACTAACAGAGGCTATGATGGAGCCATACCTTAGATACCTGCACGTATATGTTTCTATATCGGGTCCGCACTTGGGGTATCTATACAGTTCAAACTCTTTATTTAACTCTGGGCTGTGGCTTTTGAAGAAGCTGAAGAACACTCAATGCATTCATCAACTTACTTTCACAGATGATCCAGACCTCCAAAATACATTCTTTTACCAGCTCTGTAAGGATGGTTATGTTCCTTACCATTCTGCCAGAATAGATATGTGCCAAGCTGCTTCATTAGACTTTTCCAAAAGGGGCAAAGTTTTTTTGGAAATGCTGAACGACTGCTTGGACCAAATACGGTCTCCTCGCTTGGAGAATCGAGTGTTCATGCGCTGTGACGTCAACTTTGACACCTCTTCACCTATTTCGGTAATACCTGTTGCCATGGACTTGTCTTCTTCTCTAGCCTACCCTTTAGTTGGGAATCGCCCTCCTTCAAATCAAGGACCAACTGAGGAGGGTTTCGGAGGTGGAGTATTCAACAGTGGCCATGCCCTTTTGCGCATCGAGGATGAGCTGCTTGAAGACATCAACCATTGTACATTATCAGCTTAG

Protein Analysis

831

Amino Acids

93.05

Weight (kDa)

6.1

Isoelectric Point (pI)

45.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3657 PF12394 148 - 212 8.1e-21 Protein FAM135
DUF676 PF05057 553 - 714 2.5e-36 Putative serine esterase (DUF676)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 369, 2283
Acc16I TGCGCA 1 cut(s) 2444
Acc36I ACCTGC 3 cut(s) 722, 1167, 1953
Acc65I GGTACC 1 cut(s) 186
AccB1I GGYRCC 2 cut(s) 186, 1025
AccB7I CCANNNNNTGG 1 cut(s) 956
AccI GTMKAC 2 cut(s) 622, 634
AciI CCGC 7 cut(s) 86, 101, 151, 519, 1287, 1850, 1973
AclWI GGATC 4 cut(s) 1349, 1451, 1700, 2075
AcoI YGGCCR 2 cut(s) 1315, 2428
AcsI RAATTY 6 cut(s) 530, 537, 907, 1036, 1108, 1525
AcuI CTGAAG 2 cut(s) 711, 2060
AcyI GRCGYC 2 cut(s) 366, 2280
AdeI CACNNNGTG 1 cut(s) 1101
AfaI GTAC 5 cut(s) 188, 1032, 1185, 1513, 2482
AfiI CCNNNNNNNGG 5 cut(s) 272, 472, 956, 1979, 2360
AflII CTTAAG 1 cut(s) 1808
AjnI CCWGG 1 cut(s) 1561
AjuI GAANNNNNNNTTGG 2 cut(s) 2210, 2242
Alw21I GWGCWC 2 cut(s) 816, 1330
Alw26I GTCTC 4 cut(s) 35, 405, 1531, 2247
AlwI GGATC 4 cut(s) 1349, 1451, 1700, 2075
AlwNI CAGNNNCTG 1 cut(s) 1592
Ama87I CYCGRG 1 cut(s) 1148
AoxI GGCC 4 cut(s) 98, 1315, 1630, 2428
ApeKI GCWGC 7 cut(s) 497, 788, 917, 1162, 1370, 2168, 2458
ApoI RAATTY 6 cut(s) 530, 537, 907, 1036, 1108, 1525
ArsI GACNNNNNNTTYG 2 cut(s) 2270, 2302
Asp718I GGTACC 1 cut(s) 186
AspA2I CCTAGG 1 cut(s) 1505
AspLEI GCGC 2 cut(s) 2274, 2445
AspS9I GGNCC 4 cut(s) 1156, 1970, 2230, 2387
AsuC2I CCSGG 1 cut(s) 74
AsuHPI GGTGA 3 cut(s) 25, 1010, 2292
AsuII TTCGAA 2 cut(s) 535, 1684
AvaI CYCGRG 1 cut(s) 1148
AvaII GGWCC 4 cut(s) 1156, 1970, 2230, 2387
AvrII CCTAGG 1 cut(s) 1505
BaeGI GKGCMC 1 cut(s) 236
BalI TGGCCA 2 cut(s) 1317, 2430
BanI GGYRCC 2 cut(s) 186, 1025
BanII GRGCYC 2 cut(s) 816, 1330
BbsI GAAGAC 4 cut(s) 1293, 1749, 2328, 2472
Bbv12I GWGCWC 2 cut(s) 816, 1330
BbvI GCAGC 7 cut(s) 509, 775, 929, 1149, 1382, 2155, 2445
BccI CCATC 8 cut(s) 12, 177, 204, 1147, 1237, 1468, 1918, 2117
BceAI ACGGC 4 cut(s) 1013, 1617, 1691, 1920
BciT130I CCWGG 1 cut(s) 1563
BciVI GTATCC 1 cut(s) 679
BcnI CCSGG 1 cut(s) 74
BcoDI GTCTC 4 cut(s) 35, 405, 1531, 2247
BfaI CTAG 6 cut(s) 14, 164, 744, 990, 1506, 2345
BfmI CTRYAG 2 cut(s) 1163, 1612
BfrI CTTAAG 1 cut(s) 1808
BfuAI ACCTGC 3 cut(s) 722, 1167, 1953
BfuI GTATCC 1 cut(s) 679
BglI GCCNNNNNGGC 1 cut(s) 74
BglII AGATCT 2 cut(s) 166, 1835
BisI GCNGC 9 cut(s) 101, 498, 519, 789, 918, 1163, 1371, 2169, 2459
BlnI CCTAGG 1 cut(s) 1505
BlpI GCTNAGC 3 cut(s) 1383, 1846, 1862
BlsI GCNGC 9 cut(s) 102, 499, 520, 790, 919, 1164, 1372, 2170, 2460
Bme1390I CCNGG 2 cut(s) 74, 1563
Bme18I GGWCC 4 cut(s) 1156, 1970, 2230, 2387
BmeT110I CYCGRG 1 cut(s) 1148
BmgT120I GGNCC 4 cut(s) 1156, 1970, 2230, 2387
BmiI GGNNCC 4 cut(s) 188, 1027, 1929, 1971
BmrFI CCNGG 2 cut(s) 74, 1563
BmsI GCATC 9 cut(s) 19, 55, 496, 580, 771, 989, 1254, 1669, 2454
BpiI GAAGAC 4 cut(s) 1293, 1749, 2328, 2472
BpmI CTGGAG 2 cut(s) 222, 800
Bpu10I CCTNAGC 1 cut(s) 1788
Bpu1102I GCTNAGC 3 cut(s) 1383, 1846, 1862
Bpu14I TTCGAA 2 cut(s) 535, 1684
BpuEI CTTGAG 3 cut(s) 983, 1144, 1555
BpuMI CCSGG 1 cut(s) 74
BsaAI YACGTR 1 cut(s) 1951
BsaBI GATNNNNATC 2 cut(s) 510, 1015
BsaHI GRCGYC 2 cut(s) 366, 2280
BsaI GGTCTC 2 cut(s) 35, 2247
BsaJI CCNNGG 3 cut(s) 1505, 1710, 2325
BsaXI ACNNNNNCTCC 4 cut(s) 1047, 1077, 2400, 2430
Bsc4I CCNNNNNNNGG 5 cut(s) 272, 472, 956, 1979, 2360
Bse118I RCCGGY 1 cut(s) 103
Bse1I ACTGG 4 cut(s) 672, 1000, 1191, 1755
Bse3DI GCAATG 1 cut(s) 684
Bse8I GATNNNNATC 2 cut(s) 510, 1015
BseBI CCWGG 1 cut(s) 1563
BseDI CCNNGG 3 cut(s) 1505, 1710, 2325
BseJI GATNNNNATC 2 cut(s) 510, 1015
BseLI CCNNNNNNNGG 5 cut(s) 272, 472, 956, 1979, 2360
BseMI GCAATG 1 cut(s) 684
BseMII CTCAG 6 cut(s) 109, 347, 705, 1374, 1802, 2385
BseNI ACTGG 4 cut(s) 672, 1000, 1191, 1755
BseRI GAGGAG 3 cut(s) 1609, 2235, 2411
BseSI GKGCMC 1 cut(s) 236
BseXI GCAGC 7 cut(s) 509, 775, 929, 1149, 1382, 2155, 2445
BsgI GTGCAG 3 cut(s) 768, 1344, 1931
BshFI GGCC 4 cut(s) 100, 1317, 1632, 2430
BshNI GGYRCC 2 cut(s) 186, 1025
BsiHKAI GWGCWC 2 cut(s) 816, 1330
BsiHKCI CYCGRG 1 cut(s) 1148
BsiSI CCGG 2 cut(s) 74, 104
BslFI GGGAC 2 cut(s) 1788, 1887
BslI CCNNNNNNNGG 5 cut(s) 272, 472, 956, 1979, 2360
BsmAI GTCTC 4 cut(s) 35, 405, 1531, 2247
BsmFI GGGAC 2 cut(s) 1788, 1887
BsmI GAATGC 4 cut(s) 565, 1467, 1504, 2055
BsnI GGCC 4 cut(s) 100, 1317, 1632, 2430
Bso31I GGTCTC 2 cut(s) 35, 2247
BsoBI CYCGRG 1 cut(s) 1148
Bsp119I TTCGAA 2 cut(s) 535, 1684
Bsp1286I GDGCHC 3 cut(s) 236, 816, 1330
Bsp1407I TGTACA 1 cut(s) 2480
Bsp1720I GCTNAGC 3 cut(s) 1383, 1846, 1862
Bsp19I CCATGG 1 cut(s) 2325
BspACI CCGC 7 cut(s) 86, 101, 151, 519, 1287, 1850, 1973
BspANI GGCC 4 cut(s) 100, 1317, 1632, 2430
BspCNI CTCAG 6 cut(s) 108, 346, 706, 1375, 1801, 2386
BspHI TCATGA 1 cut(s) 381
BspLI GGNNCC 4 cut(s) 188, 1027, 1929, 1971
BspMAI CTGCAG 1 cut(s) 1167
BspMI ACCTGC 3 cut(s) 722, 1167, 1953
BspPI GGATC 4 cut(s) 1349, 1451, 1700, 2075
BspQI GCTCTTC 3 cut(s) 804, 1216, 1318
BspT104I TTCGAA 2 cut(s) 535, 1684
BspT107I GGYRCC 2 cut(s) 186, 1025
BspTI CTTAAG 1 cut(s) 1808
BspTNI GGTCTC 2 cut(s) 35, 2247
BsrDI GCAATG 1 cut(s) 684
BsrFI RCCGGY 1 cut(s) 103
BsrGI TGTACA 1 cut(s) 2480
BsrI ACTGG 4 cut(s) 672, 1000, 1191, 1755
BssAI RCCGGY 1 cut(s) 103
BssECI CCNNGG 3 cut(s) 1505, 1710, 2325
BssNAI GTATAC 1 cut(s) 623
BssNI GRCGYC 2 cut(s) 366, 2280
BssT1I CCWWGG 3 cut(s) 1505, 1710, 2325
Bst1107I GTATAC 1 cut(s) 623
Bst2UI CCWGG 1 cut(s) 1563
Bst4CI ACNGT 5 cut(s) 221, 1099, 1994, 2241, 2426
Bst6I CTCTTC 4 cut(s) 804, 1216, 1318, 2302
BstACI GRCGYC 2 cut(s) 366, 2280
BstAFI CTTAAG 1 cut(s) 1808
BstAPI GCANNNNNTGC 1 cut(s) 1367
BstAUI TGTACA 1 cut(s) 2480
BstBAI YACGTR 1 cut(s) 1951
BstBI TTCGAA 2 cut(s) 535, 1684
BstC8I GCNNGC 4 cut(s) 462, 495, 947, 1568
BstDSI CCRYGG 1 cut(s) 2325
BstHHI GCGC 2 cut(s) 2274, 2445
BstMAI GTCTC 4 cut(s) 35, 405, 1531, 2247
BstMWI GCNNNNNNNGC 7 cut(s) 74, 506, 515, 811, 977, 1367, 1379
BstNI CCWGG 1 cut(s) 1563
BstNSI RCATGY 1 cut(s) 464
BstSCI CCNGG 2 cut(s) 72, 1561
BstSFI CTRYAG 2 cut(s) 1163, 1612
BstSLI GKGCMC 1 cut(s) 236
BstV1I GCAGC 7 cut(s) 509, 775, 929, 1149, 1382, 2155, 2445
BstV2I GAAGAC 4 cut(s) 1293, 1749, 2328, 2472
BstX2I RGATCY 4 cut(s) 166, 1456, 1705, 1835
BstXI CCANNNNNNTGG 1 cut(s) 1338
BstYI RGATCY 4 cut(s) 166, 1456, 1705, 1835
BstZ17I GTATAC 1 cut(s) 623
BsuI GTATCC 1 cut(s) 679
BsuRI GGCC 4 cut(s) 100, 1317, 1632, 2430
BtgI CCRYGG 1 cut(s) 2325
BtsIMutI CAGTG 6 cut(s) 226, 609, 679, 1104, 1762, 2431
BveI ACCTGC 3 cut(s) 722, 1167, 1953
Cac8I GCNNGC 4 cut(s) 462, 495, 947, 1568
CaiI CAGNNNCTG 1 cut(s) 1592
CciI TCATGA 1 cut(s) 381
CfoI GCGC 2 cut(s) 2274, 2445
Cfr10I RCCGGY 1 cut(s) 103
Cfr13I GGNCC 4 cut(s) 1156, 1970, 2230, 2387
CseI GACGC 2 cut(s) 128, 986
Csp6I GTAC 5 cut(s) 187, 1031, 1184, 1512, 2481
CspCI CAANNNNNGTGG 2 cut(s) 1294, 1329
CviAII CATG 9 cut(s) 382, 461, 527, 766, 1114, 1206, 2269, 2326, 2432
CviQI GTAC 5 cut(s) 187, 1031, 1184, 1512, 2481
DraIII CACNNNGTG 1 cut(s) 1101
EaeI YGGCCR 2 cut(s) 1315, 2428
Eam1104I CTCTTC 4 cut(s) 804, 1216, 1318, 2302
EarI CTCTTC 4 cut(s) 804, 1216, 1318, 2302
EciI GGCGGA 1 cut(s) 75
Ecl136II GAGCTC 2 cut(s) 814, 1328
Eco130I CCWWGG 3 cut(s) 1505, 1710, 2325
Eco24I GRGCYC 2 cut(s) 816, 1330
Eco31I GGTCTC 2 cut(s) 35, 2247
Eco32I GATATC 1 cut(s) 387
Eco47I GGWCC 4 cut(s) 1156, 1970, 2230, 2387
Eco53kI GAGCTC 2 cut(s) 814, 1328
Eco57I CTGAAG 2 cut(s) 711, 2060
Eco88I CYCGRG 1 cut(s) 1148
EcoICRI GAGCTC 2 cut(s) 814, 1328
EcoRI GAATTC 2 cut(s) 537, 1036
EcoRII CCWGG 1 cut(s) 1561
EcoRV GATATC 1 cut(s) 387
EcoT14I CCWWGG 3 cut(s) 1505, 1710, 2325
EcoT22I ATGCAT 2 cut(s) 462, 2057
EcoT38I GRGCYC 2 cut(s) 816, 1330
ErhI CCWWGG 3 cut(s) 1505, 1710, 2325
FaeI CATG 9 cut(s) 385, 464, 530, 769, 1117, 1209, 2272, 2329, 2435
FalI AAGNNNNNCTT 2 cut(s) 1850, 1882
FaqI GGGAC 2 cut(s) 1788, 1887
FatI CATG 9 cut(s) 381, 460, 526, 765, 1113, 1205, 2268, 2325, 2431
FauI CCCGC 1 cut(s) 1280
FblI GTMKAC 2 cut(s) 622, 634
Fnu4HI GCNGC 9 cut(s) 101, 498, 519, 789, 918, 1163, 1371, 2169, 2459
FriOI GRGCYC 2 cut(s) 816, 1330
Fsp4HI GCNGC 9 cut(s) 101, 498, 519, 789, 918, 1163, 1371, 2169, 2459
FspBI CTAG 6 cut(s) 14, 164, 744, 990, 1506, 2345
FspI TGCGCA 1 cut(s) 2444
GlaI GCGC 2 cut(s) 2273, 2444
GluI GCNGC 9 cut(s) 101, 498, 519, 789, 918, 1163, 1371, 2169, 2459
GsuI CTGGAG 2 cut(s) 222, 800
HaeIII GGCC 4 cut(s) 100, 1317, 1632, 2430
HapII CCGG 2 cut(s) 74, 104
HgaI GACGC 2 cut(s) 128, 986
HhaI GCGC 2 cut(s) 2274, 2445
Hin1I GRCGYC 2 cut(s) 366, 2280
Hin1II CATG 9 cut(s) 385, 464, 530, 769, 1117, 1209, 2272, 2329, 2435
Hin6I GCGC 2 cut(s) 2272, 2443
HinP1I GCGC 2 cut(s) 2272, 2443
HincII GTYRAC 1 cut(s) 2284
HindII GTYRAC 1 cut(s) 2284
HindIII AAGCTT 3 cut(s) 1827, 1843, 1859
HinfI GANTC 8 cut(s) 716, 752, 890, 986, 1298, 1589, 2257, 2365
HpaII CCGG 2 cut(s) 74, 104
HphI GGTGA 3 cut(s) 25, 1010, 2292
Hpy166II GTNNAC 5 cut(s) 623, 635, 1249, 1597, 2284
Hpy188I TCNGA 8 cut(s) 280, 487, 715, 985, 1588, 1732, 1766, 2408
Hpy8I GTNNAC 5 cut(s) 623, 635, 1249, 1597, 2284
HpyAV CCTTC 5 cut(s) 658, 686, 1130, 1174, 2385
HpyCH4III ACNGT 5 cut(s) 221, 1099, 1994, 2241, 2426
HpyCH4IV ACGT 3 cut(s) 366, 1950, 2280
HpyF10VI GCNNNNNNNGC 7 cut(s) 74, 506, 515, 811, 977, 1367, 1379
HpySE526I ACGT 3 cut(s) 366, 1950, 2280
Hsp92I GRCGYC 2 cut(s) 366, 2280
Hsp92II CATG 9 cut(s) 385, 464, 530, 769, 1117, 1209, 2272, 2329, 2435
HspAI GCGC 2 cut(s) 2272, 2443
KpnI GGTACC 1 cut(s) 190
LguI GCTCTTC 3 cut(s) 804, 1216, 1318
LmnI GCTCC 7 cut(s) 268, 819, 1333, 1486, 1564, 1622, 1927
Lsp1109I GCAGC 7 cut(s) 509, 775, 929, 1149, 1382, 2155, 2445
LweI GCATC 9 cut(s) 19, 55, 496, 580, 771, 989, 1254, 1669, 2454
MaeI CTAG 6 cut(s) 14, 164, 744, 990, 1506, 2345
MaeII ACGT 3 cut(s) 366, 1950, 2280
MaeIII GTNAC 3 cut(s) 221, 1199, 2276
MfeI CAATTG 1 cut(s) 659
MflI RGATCY 4 cut(s) 166, 1456, 1705, 1835
MhlI GDGCHC 3 cut(s) 236, 816, 1330
MlsI TGGCCA 2 cut(s) 1317, 2430
MluNI TGGCCA 2 cut(s) 1317, 2430
MlyI GAGTC 3 cut(s) 725, 746, 1307
MmeI TCCRAC 2 cut(s) 96, 199
Mox20I TGGCCA 2 cut(s) 1317, 2430
Mph1103I ATGCAT 2 cut(s) 462, 2057
MscI TGGCCA 2 cut(s) 1317, 2430
MseI TTAA 9 cut(s) 195, 774, 1044, 1170, 1419, 1553, 1809, 1857, 2010
MslI CAYNNNNRTG 3 cut(s) 588, 1545, 1953
Msp20I TGGCCA 2 cut(s) 1317, 2430
MspA1I CMGCKG 1 cut(s) 521
MspCI CTTAAG 1 cut(s) 1808
MspI CCGG 2 cut(s) 74, 104
MspR9I CCNGG 2 cut(s) 74, 1563
MunI CAATTG 1 cut(s) 659
Mva1269I GAATGC 4 cut(s) 565, 1467, 1504, 2055
MvaI CCWGG 1 cut(s) 1563
MwoI GCNNNNNNNGC 7 cut(s) 74, 506, 515, 811, 977, 1367, 1379
NciI CCSGG 1 cut(s) 74
NcoI CCATGG 1 cut(s) 2325
NlaIII CATG 9 cut(s) 385, 464, 530, 769, 1117, 1209, 2272, 2329, 2435
NlaIV GGNNCC 4 cut(s) 188, 1027, 1929, 1971
NmuCI GTSAC 3 cut(s) 221, 1199, 2276
NsbI TGCGCA 1 cut(s) 2444
NsiI ATGCAT 2 cut(s) 462, 2057
NspI RCATGY 1 cut(s) 464
NspV TTCGAA 2 cut(s) 535, 1684
PaeI GCATGC 1 cut(s) 464
PagI TCATGA 1 cut(s) 381
PciSI GCTCTTC 3 cut(s) 804, 1216, 1318
PcsI WCGNNNNNNNCGW 1 cut(s) 1681
PctI GAATGC 4 cut(s) 565, 1467, 1504, 2055
PfeI GAWTC 5 cut(s) 890, 986, 1589, 2257, 2365
PflMI CCANNNNNTGG 1 cut(s) 956
PkrI GCNGC 9 cut(s) 102, 499, 520, 790, 919, 1164, 1372, 2170, 2460
PleI GAGTC 3 cut(s) 724, 746, 1306
PpsI GAGTC 3 cut(s) 724, 746, 1306
Ppu21I YACGTR 1 cut(s) 1951
Psp124BI GAGCTC 2 cut(s) 816, 1330
Psp6I CCWGG 1 cut(s) 1561
PspGI CCWGG 1 cut(s) 1561
PspN4I GGNNCC 4 cut(s) 188, 1027, 1929, 1971
PspPI GGNCC 4 cut(s) 1156, 1970, 2230, 2387
PstI CTGCAG 1 cut(s) 1167
PstNI CAGNNNCTG 1 cut(s) 1592
PsuI RGATCY 4 cut(s) 166, 1456, 1705, 1835
RsaI GTAC 5 cut(s) 188, 1032, 1185, 1513, 2482
RsaNI GTAC 5 cut(s) 187, 1031, 1184, 1512, 2481
RseI CAYNNNNRTG 3 cut(s) 588, 1545, 1953
SacI GAGCTC 2 cut(s) 816, 1330
SapI GCTCTTC 3 cut(s) 804, 1216, 1318
SaqAI TTAA 9 cut(s) 195, 774, 1044, 1170, 1419, 1553, 1809, 1857, 2010
SatI GCNGC 9 cut(s) 101, 498, 519, 789, 918, 1163, 1371, 2169, 2459
Sau96I GGNCC 4 cut(s) 1156, 1970, 2230, 2387
SchI GAGTC 3 cut(s) 725, 746, 1307
ScrFI CCNGG 2 cut(s) 74, 1563
SduI GDGCHC 3 cut(s) 236, 816, 1330
SfaNI GCATC 9 cut(s) 19, 55, 496, 580, 771, 989, 1254, 1669, 2454
SfcI CTRYAG 2 cut(s) 1163, 1612
SfuI TTCGAA 2 cut(s) 535, 1684
SgrAI CRCCGGYG 1 cut(s) 103
SinI GGWCC 4 cut(s) 1156, 1970, 2230, 2387
SmiMI CAYNNNNRTG 3 cut(s) 588, 1545, 1953
SmlI CTYRAG 4 cut(s) 962, 1123, 1534, 1808
SmoI CTYRAG 4 cut(s) 962, 1123, 1534, 1808
SphI GCATGC 1 cut(s) 464
SsiI CCGC 7 cut(s) 86, 101, 151, 519, 1287, 1850, 1973
SspMI CTAG 6 cut(s) 14, 164, 744, 990, 1506, 2345
SstI GAGCTC 2 cut(s) 816, 1330
StyD4I CCNGG 2 cut(s) 72, 1561
StyI CCWWGG 3 cut(s) 1505, 1710, 2325
TaaI ACNGT 5 cut(s) 221, 1099, 1994, 2241, 2426
TaiI ACGT 3 cut(s) 369, 1953, 2283
TaqI TCGA 4 cut(s) 535, 1684, 2260, 2448
TaqII GACCGA 1 cut(s) 1416
TatI WGTACW 1 cut(s) 2480
TauI GCSGC 2 cut(s) 103, 521
TfiI GAWTC 5 cut(s) 890, 986, 1589, 2257, 2365
Tru1I TTAA 9 cut(s) 195, 774, 1044, 1170, 1419, 1553, 1809, 1857, 2010
Tru9I TTAA 9 cut(s) 195, 774, 1044, 1170, 1419, 1553, 1809, 1857, 2010
TscAI CASTG 6 cut(s) 226, 609, 679, 1104, 1762, 2431
TseFI GTSAC 3 cut(s) 221, 1199, 2276
TseI GCWGC 7 cut(s) 497, 788, 917, 1162, 1370, 2168, 2458
Tsp45I GTSAC 3 cut(s) 221, 1199, 2276
TspRI CASTG 6 cut(s) 226, 609, 679, 1104, 1762, 2431
Van91I CCANNNNNTGG 1 cut(s) 956
Vha464I CTTAAG 1 cut(s) 1808
VpaK11BI GGWCC 4 cut(s) 1156, 1970, 2230, 2387
XapI RAATTY 6 cut(s) 530, 537, 907, 1036, 1108, 1525
XbaI TCTAGA 2 cut(s) 163, 989
XceI RCATGY 1 cut(s) 464
XmaJI CCTAGG 1 cut(s) 1505
XmiI GTMKAC 2 cut(s) 622, 634
XspI CTAG 6 cut(s) 14, 164, 744, 990, 1506, 2345
ZraI GACGTC 2 cut(s) 367, 2281
Zsp2I ATGCAT 2 cut(s) 462, 2057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.