Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0002474

Physical Location & Seq

Genomic Coordinates Forward (+)

58844005 .. 58852219

Gene Structure 8215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG418100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGTTCATAAATTTTGATGTTAATGGGGTATATACTTTTCAGGGTCTATCCTCATCTGCTGTTCTTTTGAAGTTTGAGCTTATGCATGCCCCCATATCGGGAAATAGGTCTGACTTGCAGGCAGCTCTGGATGCTAATCCTGCCGCTGTCCATGAATTTCGAATTCCTCCTAAAGCTCTTTTGGGTTTGCATTCATATTGCCCTGTTCATTTTGATGCGTTCCATTCAGTGCTTGTTGATGTTAGTATACACATCAGTCTACTAAAAGCTCCTTACAAACATCAATCGAAGGTATCCAGTGATCATAGCATTGCTGAAGGTGTTGGTGGAGAAACTTCTGAGTCAAATCAAGAAGCAGGTCAAGTAGCTAGTGCAGACTCTAATGGCATCATGCTTCTTAAATCATTGTTAGCTGCTCGTAGCATACTGCTTGAAGAGCTCCAGACACTTAGCAAGGCTCTTGACCAAGAAATTGATTTGACTGATTTTATTTCTAAAATGGATAATACGAATGATTCTTTCCTGCAAGAAAATTTGGTTGCAGCAGATGACAAAGTTTCAGGACAAGGCAAGCCACAAAATGGTCTTGAGAAAGCAAATGGCACATCAGATTCTAGAACTGGTGAATTGCCACGATCTATATCAAGGGGTGCCGTACTGAATTCTTTTAATTCATTGGGAGATCAAGTTTTATATCTCTGGAATACGTTTTTGCAATTCCACAGGTTTAACAAAACGAAGATACTGGAATACTTGCGTGACACATGGGCTAAAGATAGAAGAGCTGAATGGTCAATATGGATGGTTTACTCTAAGGTTGAGATGCCTCATCACTTTCTAAATAGCGGGTTTGATGAGTCTTCCAATAGTGGTGGCCATAGGAGAGCTCCAAGTTTGTGGAAGCTGAATGATGATCCTGCACAGATTGCAGCTACGCGTGCTGAGCTTCATAGACGAAGTATTGCACAAATGAAGATTAACAATCGATCAATTCAAGACTTGCATATATTTGGAGATCCATCAAGCATTCCTATTGTTATTGTGGAGCGTGTCTTGAATGCCCCTAGGCGTACTAATAGTGAAAATTCTTACTTGAGACATATGGATGTGTTAAATGCTCCTGGCTTGCAAAGTGTATATGGGTCAGAATCTGTAAACAAGCAATCTGGCTATAGCTCCTCAAAGAAAGGCCGTGTTTTGAAGATTGTTGTCTTTGTGCATGGCTTTCAGGGGCATCATCTGGATTTACGGCTCATTCGAAATCAATGGCTTTTGGTAGATCCCAAGGCAGAGTTTCTAATGTCAGAGGCAAACGAAGACAAAACATCCAGTGATTTCAGAGAAATGGGACAAAGGTTAGCTCAGGAAGTTATTACTTTCCTTAAGAAGAAAATGGATAAAGCTTCAAGATCTGGAAGCTTAGCGGATATTAAGCTTAGCTTTGTGGGACATTCTATTGGAAATGTCATAATAAGAACGGCACTAACAGAGGCTATGATGGAGCCATACCTTAGATACCTACACGTATATGTTTCTATATCGGGTCCGCACTTGGGGTATCTATACAGTTCAAACTCTTTATTCAACTCTGGGCTGTGGCTTTTGAAGAAGCTCAAGAACACTCAATGCATTCATCAACTTACTTTCACAGATGATCCAGACCTCCAAAATACATTCTTTTACCAGCTCTGTAAGAAGAAGACGCTAGAAAATTTCAAGCATATAATCCTGTTATCTTCACCACAGGATGGTTATGTTCCTTACCATTCTGCCAGAATAGATATGTGCCAAGCTGCTTCATTAGACTTTTCCAAAAGGGGCAAAGTTTTTCTGGAAATGCTGAACGACTGCTTGGATCAAATACGGTCTCCTCGCTTGGAGAATCGAGTGTTCATGCGCTGTGACGTCAACTTTGACACCTCTTCATATGGAAAGAACTTGAACACATTCATCGGAAGGGCCGCCCATATTGATTTTTTGGAATCTGACATTTTTGCAAGATTCCTCATGTGGTCTTTCCCAGACTTATTTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004856 GO:0005975 GO:0005996 GO:0005997 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019321 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0046835 GO:0071704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3657 DUF676

Protein Analysis

678

Amino Acids

76.53

Weight (kDa)

7.73

Isoelectric Point (pI)

40.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3657	PF12394	23 - 87	7.2e-21	Protein FAM135
DUF676	PF05057	401 - 596	5.2e-48	Putative serine esterase (DUF676)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09980 AT1G09980 AT1G09980 AT1G58350 AT1G58350 AT1G58350 AT1G58350
fragaria_vesca	FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540 FvH4_5g33540
malus_domestica	MD08G1211000.v1.1 MD15G1398300.v1.1
prunus_persica	Prupe.1G542900_v2.0.a1
pyrus_communis	pycom08g18180
rosa_chinensis	RchiOBHm_Chr7g0232361
rosa_laevigata	RLG00000001352
rosa_multiflora	Rmu_sc0000222.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228420
rosa_rugosa	Rorug07G0272900 Rorug07G0273000
rosa_samantha	Rh7AG426700 Rh7BG400500 Rh7CG446500 Rh7DG418100
rosa_wichuraiana	Rw7G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1908
Acc36I	ACCTGC	1 cut(s)	347
AccB1I	GGYRCC	1 cut(s)	650
AccB7I	CCANNNNNTGG	2 cut(s)	581, 1748
AccI	GTMKAC	2 cut(s)	247, 259
AccII	CGCG	1 cut(s)	937
AciI	CCGC	5 cut(s)	144, 846, 1424, 1547, 1962
AclWI	GGATC	5 cut(s)	908, 1010, 1274, 1649, 1863
AcoI	YGGCCR	1 cut(s)	874
AcsI	RAATTY	7 cut(s)	10, 155, 162, 532, 661, 1084, 1711
AcuI	CTGAAG	1 cut(s)	336
AcyI	GRCGYC	1 cut(s)	1905
AfaI	GTAC	2 cut(s)	657, 1072
AfiI	CCNNNNNNNGG	5 cut(s)	97, 98, 581, 1553, 1748
AflII	CTTAAG	1 cut(s)	1382
AflIII	ACRYGT	2 cut(s)	935, 1522
AjnI	CCWGG	1 cut(s)	1120
AjuI	GAANNNNNNNTTGG	2 cut(s)	1835, 1867
Alw21I	GWGCWC	2 cut(s)	441, 889
Alw26I	GTCTC	2 cut(s)	1090, 1872
AlwI	GGATC	5 cut(s)	908, 1010, 1274, 1649, 1863
AlwNI	CAGNNNCTG	1 cut(s)	1151
AoxI	GGCC	3 cut(s)	874, 1189, 1959
ApeKI	GCWGC	5 cut(s)	122, 413, 542, 929, 1793
ApoI	RAATTY	7 cut(s)	10, 155, 162, 532, 661, 1084, 1711
ArsI	GACNNNNNNTTYG	2 cut(s)	1895, 1927
Asp700I	GAANNNNTTC	1 cut(s)	1946
AspA2I	CCTAGG	1 cut(s)	1064
AspLEI	GCGC	1 cut(s)	1899
AspS9I	GGNCC	2 cut(s)	1544, 1959
AsuHPI	GGTGA	2 cut(s)	635, 1731
AsuII	TTCGAA	2 cut(s)	160, 1258
AvaII	GGWCC	1 cut(s)	1544
AvrII	CCTAGG	1 cut(s)	1064
BalI	TGGCCA	1 cut(s)	876
BanI	GGYRCC	1 cut(s)	650
BanII	GRGCYC	2 cut(s)	441, 889
BbsI	GAAGAC	3 cut(s)	852, 1323, 1706
Bbv12I	GWGCWC	2 cut(s)	441, 889
BbvI	GCAGC	5 cut(s)	134, 400, 554, 941, 1780
BccI	CCATC	4 cut(s)	796, 1027, 1492, 1742
BceAI	ACGGC	4 cut(s)	638, 1176, 1265, 1494
BciT130I	CCWGG	1 cut(s)	1122
BciVI	GTATCC	1 cut(s)	304
BclI	TGATCA	1 cut(s)	301
BcoDI	GTCTC	2 cut(s)	1090, 1872
BfaI	CTAG	4 cut(s)	369, 615, 1065, 1706
BfmI	CTRYAG	1 cut(s)	1171
BfrI	CTTAAG	1 cut(s)	1382
BfuAI	ACCTGC	1 cut(s)	347
BfuI	GTATCC	1 cut(s)	304
BglII	AGATCT	1 cut(s)	1409
BisI	GCNGC	7 cut(s)	123, 144, 414, 543, 930, 1794, 1962
BlnI	CCTAGG	1 cut(s)	1064
BlpI	GCTNAGC	3 cut(s)	942, 1420, 1436
BlsI	GCNGC	7 cut(s)	124, 145, 415, 544, 931, 1795, 1963
Bme1390I	CCNGG	1 cut(s)	1122
Bme18I	GGWCC	1 cut(s)	1544
BmgT120I	GGNCC	2 cut(s)	1544, 1959
BmiI	GGNNCC	3 cut(s)	652, 1503, 1545
BmrFI	CCNGG	1 cut(s)	1122
BmsI	GCATC	5 cut(s)	121, 205, 396, 813, 1243
BpiI	GAAGAC	3 cut(s)	852, 1323, 1706
BpmI	CTGGAG	1 cut(s)	425
Bpu10I	CCTNAGC	1 cut(s)	1362
Bpu1102I	GCTNAGC	3 cut(s)	942, 1420, 1436
Bpu14I	TTCGAA	2 cut(s)	160, 1258
BpuEI	CTTGAG	3 cut(s)	608, 1114, 1598
Bsa29I	ATCGAT	1 cut(s)	985
BsaAI	YACGTR	1 cut(s)	1525
BsaBI	GATNNNNATC	2 cut(s)	135, 640
BsaHI	GRCGYC	1 cut(s)	1905
BsaI	GGTCTC	1 cut(s)	1872
BsaJI	CCNNGG	2 cut(s)	1064, 1284
BsaXI	ACNNNNNCTCC	2 cut(s)	672, 702
Bsc4I	CCNNNNNNNGG	5 cut(s)	97, 98, 581, 1553, 1748
Bse1I	ACTGG	4 cut(s)	297, 625, 750, 1329
Bse3DI	GCAATG	1 cut(s)	309
Bse8I	GATNNNNATC	2 cut(s)	135, 640
BseBI	CCWGG	1 cut(s)	1122
BseCI	ATCGAT	1 cut(s)	985
BseDI	CCNNGG	2 cut(s)	1064, 1284
BseGI	GGATG	5 cut(s)	136, 807, 1111, 1325, 1753
BseJI	GATNNNNATC	2 cut(s)	135, 640
BseLI	CCNNNNNNNGG	5 cut(s)	97, 98, 581, 1553, 1748
BseMI	GCAATG	1 cut(s)	309
BseMII	CTCAG	3 cut(s)	330, 933, 1376
BseNI	ACTGG	4 cut(s)	297, 625, 750, 1329
BseRI	GAGGAG	2 cut(s)	1168, 1860
BseXI	GCAGC	5 cut(s)	134, 400, 554, 941, 1780
BsgI	GTGCAG	2 cut(s)	393, 903
Bsh1236I	CGCG	1 cut(s)	937
BshFI	GGCC	3 cut(s)	876, 1191, 1961
BshNI	GGYRCC	1 cut(s)	650
BshVI	ATCGAT	1 cut(s)	985
BsiHKAI	GWGCWC	2 cut(s)	441, 889
BslFI	GGGAC	2 cut(s)	1362, 1461
BslI	CCNNNNNNNGG	5 cut(s)	97, 98, 581, 1553, 1748
BsmAI	GTCTC	2 cut(s)	1090, 1872
BsmFI	GGGAC	2 cut(s)	1362, 1461
BsmI	GAATGC	4 cut(s)	190, 1026, 1063, 1629
BsnI	GGCC	3 cut(s)	876, 1191, 1961
Bso31I	GGTCTC	1 cut(s)	1872
Bsp119I	TTCGAA	2 cut(s)	160, 1258
Bsp1286I	GDGCHC	2 cut(s)	441, 889
Bsp1720I	GCTNAGC	3 cut(s)	942, 1420, 1436
BspACI	CCGC	5 cut(s)	144, 846, 1424, 1547, 1962
BspANI	GGCC	3 cut(s)	876, 1191, 1961
BspCNI	CTCAG	3 cut(s)	331, 934, 1375
BspDI	ATCGAT	1 cut(s)	985
BspFNI	CGCG	1 cut(s)	937
BspLI	GGNNCC	3 cut(s)	652, 1503, 1545
BspMI	ACCTGC	1 cut(s)	347
BspPI	GGATC	5 cut(s)	908, 1010, 1274, 1649, 1863
BspQI	GCTCTTC	2 cut(s)	429, 775
BspT104I	TTCGAA	2 cut(s)	160, 1258
BspT107I	GGYRCC	1 cut(s)	650
BspTI	CTTAAG	1 cut(s)	1382
BspTNI	GGTCTC	1 cut(s)	1872
BsrDI	GCAATG	1 cut(s)	309
BsrI	ACTGG	4 cut(s)	297, 625, 750, 1329
BssECI	CCNNGG	2 cut(s)	1064, 1284
BssNAI	GTATAC	1 cut(s)	248
BssNI	GRCGYC	1 cut(s)	1905
BssT1I	CCWWGG	2 cut(s)	1064, 1284
Bst1107I	GTATAC	1 cut(s)	248
Bst2UI	CCWGG	1 cut(s)	1122
Bst4CI	ACNGT	2 cut(s)	1568, 1866
Bst6I	CTCTTC	3 cut(s)	429, 775, 1927
BstACI	GRCGYC	1 cut(s)	1905
BstAFI	CTTAAG	1 cut(s)	1382
BstAPI	GCANNNNNTGC	1 cut(s)	926
BstBAI	YACGTR	1 cut(s)	1525
BstBI	TTCGAA	2 cut(s)	160, 1258
BstC8I	GCNNGC	5 cut(s)	87, 120, 572, 939, 1127
BstDEI	CTNAG	8 cut(s)	339, 449, 813, 942, 1362, 1420, 1436, 1511
BstF5I	GGATG	5 cut(s)	136, 807, 1111, 1325, 1753
BstFNI	CGCG	1 cut(s)	937
BstHHI	GCGC	1 cut(s)	1899
BstMAI	GTCTC	2 cut(s)	1090, 1872
BstMWI	GCNNNNNNNGC	6 cut(s)	131, 140, 436, 926, 938, 943
BstNI	CCWGG	1 cut(s)	1122
BstNSI	RCATGY	1 cut(s)	89
BstSCI	CCNGG	1 cut(s)	1120
BstSFI	CTRYAG	1 cut(s)	1171
BstUI	CGCG	1 cut(s)	937
BstV1I	GCAGC	5 cut(s)	134, 400, 554, 941, 1780
BstV2I	GAAGAC	3 cut(s)	852, 1323, 1706
BstX2I	RGATCY	3 cut(s)	1015, 1279, 1409
BstXI	CCANNNNNNTGG	1 cut(s)	897
BstYI	RGATCY	3 cut(s)	1015, 1279, 1409
BstZ17I	GTATAC	1 cut(s)	248
Bsu15I	ATCGAT	1 cut(s)	985
BsuI	GTATCC	1 cut(s)	304
BsuRI	GGCC	3 cut(s)	876, 1191, 1961
BsuTUI	ATCGAT	1 cut(s)	985
BtsCI	GGATG	5 cut(s)	136, 807, 1111, 1325, 1753
BtsIMutI	CAGTG	3 cut(s)	234, 304, 1336
BveI	ACCTGC	1 cut(s)	347
Cac8I	GCNNGC	5 cut(s)	87, 120, 572, 939, 1127
CaiI	CAGNNNCTG	1 cut(s)	1151
CfoI	GCGC	1 cut(s)	1899
Cfr13I	GGNCC	2 cut(s)	1544, 1959
ClaI	ATCGAT	1 cut(s)	985
CseI	GACGC	1 cut(s)	1711
Csp6I	GTAC	2 cut(s)	656, 1071
CspCI	CAANNNNNGTGG	2 cut(s)	853, 888
CviAII	CATG	7 cut(s)	86, 152, 391, 765, 1220, 1894, 2008
CviQI	GTAC	2 cut(s)	656, 1071
DdeI	CTNAG	8 cut(s)	339, 449, 813, 942, 1362, 1420, 1436, 1511
EaeI	YGGCCR	1 cut(s)	874
Eam1104I	CTCTTC	3 cut(s)	429, 775, 1927
EarI	CTCTTC	3 cut(s)	429, 775, 1927
Ecl136II	GAGCTC	2 cut(s)	439, 887
Eco130I	CCWWGG	2 cut(s)	1064, 1284
Eco24I	GRGCYC	2 cut(s)	441, 889
Eco31I	GGTCTC	1 cut(s)	1872
Eco47I	GGWCC	1 cut(s)	1544
Eco53kI	GAGCTC	2 cut(s)	439, 887
Eco57I	CTGAAG	1 cut(s)	336
EcoICRI	GAGCTC	2 cut(s)	439, 887
EcoRI	GAATTC	2 cut(s)	162, 661
EcoRII	CCWGG	1 cut(s)	1120
EcoT14I	CCWWGG	2 cut(s)	1064, 1284
EcoT22I	ATGCAT	2 cut(s)	87, 1631
EcoT38I	GRGCYC	2 cut(s)	441, 889
ErhI	CCWWGG	2 cut(s)	1064, 1284
FaeI	CATG	7 cut(s)	89, 155, 394, 768, 1223, 1897, 2011
FalI	AAGNNNNNCTT	2 cut(s)	1424, 1456
FaqI	GGGAC	2 cut(s)	1362, 1461
FatI	CATG	7 cut(s)	85, 151, 390, 764, 1219, 1893, 2007
FauI	CCCGC	1 cut(s)	839
FauNDI	CATATG	2 cut(s)	1101, 1927
FbaI	TGATCA	1 cut(s)	301
FblI	GTMKAC	2 cut(s)	247, 259
Fnu4HI	GCNGC	7 cut(s)	123, 144, 414, 543, 930, 1794, 1962
FokI	GGATG	5 cut(s)	143, 814, 1118, 1312, 1760
FriOI	GRGCYC	2 cut(s)	441, 889
Fsp4HI	GCNGC	7 cut(s)	123, 144, 414, 543, 930, 1794, 1962
FspBI	CTAG	4 cut(s)	369, 615, 1065, 1706
GlaI	GCGC	1 cut(s)	1898
GluI	GCNGC	7 cut(s)	123, 144, 414, 543, 930, 1794, 1962
GsuI	CTGGAG	1 cut(s)	425
HaeIII	GGCC	3 cut(s)	876, 1191, 1961
HgaI	GACGC	1 cut(s)	1711
HhaI	GCGC	1 cut(s)	1899
Hin1I	GRCGYC	1 cut(s)	1905
Hin1II	CATG	7 cut(s)	89, 155, 394, 768, 1223, 1897, 2011
Hin6I	GCGC	1 cut(s)	1897
HinP1I	GCGC	1 cut(s)	1897
HincII	GTYRAC	1 cut(s)	1909
HindII	GTYRAC	1 cut(s)	1909
HindIII	AAGCTT	3 cut(s)	1401, 1417, 1433
HinfI	GANTC	9 cut(s)	341, 377, 515, 611, 857, 1148, 1882, 1982, 2001
HphI	GGTGA	2 cut(s)	635, 1731
Hpy166II	GTNNAC	5 cut(s)	248, 260, 808, 1156, 1909
Hpy188I	TCNGA	8 cut(s)	112, 340, 610, 1147, 1306, 1340, 1955, 1987
Hpy8I	GTNNAC	5 cut(s)	248, 260, 808, 1156, 1909
HpyAV	CCTTC	3 cut(s)	283, 311, 1950
HpyCH4III	ACNGT	2 cut(s)	1568, 1866
HpyCH4IV	ACGT	3 cut(s)	707, 1524, 1905
HpyF10VI	GCNNNNNNNGC	6 cut(s)	131, 140, 436, 926, 938, 943
HpyF3I	CTNAG	8 cut(s)	339, 449, 813, 942, 1362, 1420, 1436, 1511
HpySE526I	ACGT	3 cut(s)	707, 1524, 1905
Hsp92I	GRCGYC	1 cut(s)	1905
Hsp92II	CATG	7 cut(s)	89, 155, 394, 768, 1223, 1897, 2011
HspAI	GCGC	1 cut(s)	1897
Ksp22I	TGATCA	1 cut(s)	301
LguI	GCTCTTC	2 cut(s)	429, 775
LmnI	GCTCC	7 cut(s)	274, 444, 892, 1045, 1123, 1181, 1501
Lsp1109I	GCAGC	5 cut(s)	134, 400, 554, 941, 1780
LweI	GCATC	5 cut(s)	121, 205, 396, 813, 1243
MaeI	CTAG	4 cut(s)	369, 615, 1065, 1706
MaeII	ACGT	3 cut(s)	707, 1524, 1905
MaeIII	GTNAC	2 cut(s)	758, 1901
MflI	RGATCY	3 cut(s)	1015, 1279, 1409
MhlI	GDGCHC	2 cut(s)	441, 889
MlsI	TGGCCA	1 cut(s)	876
MluI	ACGCGT	1 cut(s)	935
MluNI	TGGCCA	1 cut(s)	876
MlyI	GAGTC	3 cut(s)	350, 371, 866
Mox20I	TGGCCA	1 cut(s)	876
Mph1103I	ATGCAT	2 cut(s)	87, 1631
MroXI	GAANNNNTTC	1 cut(s)	1946
MscI	TGGCCA	1 cut(s)	876
MseI	TTAA	8 cut(s)	21, 399, 669, 729, 978, 1112, 1383, 1431
MslI	CAYNNNNRTG	3 cut(s)	213, 1104, 1527
Msp20I	TGGCCA	1 cut(s)	876
MspA1I	CMGCKG	1 cut(s)	146
MspCI	CTTAAG	1 cut(s)	1382
MspR9I	CCNGG	1 cut(s)	1122
Mva1269I	GAATGC	4 cut(s)	190, 1026, 1063, 1629
MvaI	CCWGG	1 cut(s)	1122
MvnI	CGCG	1 cut(s)	937
MwoI	GCNNNNNNNGC	6 cut(s)	131, 140, 436, 926, 938, 943
NdeI	CATATG	2 cut(s)	1101, 1927
NlaIII	CATG	7 cut(s)	89, 155, 394, 768, 1223, 1897, 2011
NlaIV	GGNNCC	3 cut(s)	652, 1503, 1545
NmuCI	GTSAC	2 cut(s)	758, 1901
NsiI	ATGCAT	2 cut(s)	87, 1631
NspI	RCATGY	1 cut(s)	89
NspV	TTCGAA	2 cut(s)	160, 1258
PaeI	GCATGC	1 cut(s)	89
PciSI	GCTCTTC	2 cut(s)	429, 775
PcsI	WCGNNNNNNNCGW	1 cut(s)	1255
PctI	GAATGC	4 cut(s)	190, 1026, 1063, 1629
PdmI	GAANNNNTTC	1 cut(s)	1946
PfeI	GAWTC	6 cut(s)	515, 611, 1148, 1882, 1982, 2001
PflMI	CCANNNNNTGG	2 cut(s)	581, 1748
PkrI	GCNGC	7 cut(s)	124, 145, 415, 544, 931, 1795, 1963
PleI	GAGTC	3 cut(s)	349, 371, 865
PpsI	GAGTC	3 cut(s)	349, 371, 865
Ppu21I	YACGTR	1 cut(s)	1525
Psp124BI	GAGCTC	2 cut(s)	441, 889
Psp6I	CCWGG	1 cut(s)	1120
PspGI	CCWGG	1 cut(s)	1120
PspN4I	GGNNCC	3 cut(s)	652, 1503, 1545
PspPI	GGNCC	2 cut(s)	1544, 1959
PstNI	CAGNNNCTG	1 cut(s)	1151
PsuI	RGATCY	3 cut(s)	1015, 1279, 1409
RsaI	GTAC	2 cut(s)	657, 1072
RsaNI	GTAC	2 cut(s)	656, 1071
RseI	CAYNNNNRTG	3 cut(s)	213, 1104, 1527
SacI	GAGCTC	2 cut(s)	441, 889
SapI	GCTCTTC	2 cut(s)	429, 775
SaqAI	TTAA	8 cut(s)	21, 399, 669, 729, 978, 1112, 1383, 1431
SatI	GCNGC	7 cut(s)	123, 144, 414, 543, 930, 1794, 1962
Sau96I	GGNCC	2 cut(s)	1544, 1959
SchI	GAGTC	3 cut(s)	350, 371, 866
ScrFI	CCNGG	1 cut(s)	1122
SduI	GDGCHC	2 cut(s)	441, 889
SfaNI	GCATC	5 cut(s)	121, 205, 396, 813, 1243
SfcI	CTRYAG	1 cut(s)	1171
SfuI	TTCGAA	2 cut(s)	160, 1258
SinI	GGWCC	1 cut(s)	1544
SmiMI	CAYNNNNRTG	3 cut(s)	213, 1104, 1527
SmlI	CTYRAG	4 cut(s)	587, 1093, 1382, 1613
SmoI	CTYRAG	4 cut(s)	587, 1093, 1382, 1613
SphI	GCATGC	1 cut(s)	89
SsiI	CCGC	5 cut(s)	144, 846, 1424, 1547, 1962
SspMI	CTAG	4 cut(s)	369, 615, 1065, 1706
SstI	GAGCTC	2 cut(s)	441, 889
StyD4I	CCNGG	1 cut(s)	1120
StyI	CCWWGG	2 cut(s)	1064, 1284
TaaI	ACNGT	2 cut(s)	1568, 1866
TaiI	ACGT	3 cut(s)	710, 1527, 1908
TaqI	TCGA	5 cut(s)	160, 287, 985, 1258, 1885
TauI	GCSGC	2 cut(s)	146, 1964
TfiI	GAWTC	6 cut(s)	515, 611, 1148, 1882, 1982, 2001
Tru1I	TTAA	8 cut(s)	21, 399, 669, 729, 978, 1112, 1383, 1431
Tru9I	TTAA	8 cut(s)	21, 399, 669, 729, 978, 1112, 1383, 1431
TscAI	CASTG	3 cut(s)	234, 304, 1336
TseFI	GTSAC	2 cut(s)	758, 1901
TseI	GCWGC	5 cut(s)	122, 413, 542, 929, 1793
Tsp45I	GTSAC	2 cut(s)	758, 1901
TspRI	CASTG	3 cut(s)	234, 304, 1336
Van91I	CCANNNNNTGG	2 cut(s)	581, 1748
Vha464I	CTTAAG	1 cut(s)	1382
VpaK11BI	GGWCC	1 cut(s)	1544
XapI	RAATTY	7 cut(s)	10, 155, 162, 532, 661, 1084, 1711
XbaI	TCTAGA	1 cut(s)	614
XceI	RCATGY	1 cut(s)	89
XmaJI	CCTAGG	1 cut(s)	1064
XmiI	GTMKAC	2 cut(s)	247, 259
XmnI	GAANNNNTTC	1 cut(s)	1946
XspI	CTAG	4 cut(s)	369, 615, 1065, 1706
ZraI	GACGTC	1 cut(s)	1906
Zsp2I	ATGCAT	2 cut(s)	87, 1631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.