Sister chromatid cohesion protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000388.1_g000053 Rmu_sc0004386.1_g000027 Rmu_sc0006428.1_g000015 Rmu_sc0006959.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00032030 |
| rosa_samantha | Rh1BG198400 Rh1DG226300 Rh4DG145600 Rh6BG129900 Rh6CG128200 Rh6DG115300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 252 |
| AccB1I | GGYRCC | 1 cut(s) | 386 |
| AccBSI | CCGCTC | 2 cut(s) | 209, 499 |
| AciI | CCGC | 4 cut(s) | 54, 207, 371, 499 |
| AcyI | GRCGYC | 3 cut(s) | 204, 249, 387 |
| AfaI | GTAC | 3 cut(s) | 359, 503, 511 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 424 |
| AgsI | TTSAA | 3 cut(s) | 193, 262, 290 |
| AjiI | CACGTC | 1 cut(s) | 494 |
| AluBI | AGCT | 3 cut(s) | 24, 42, 265 |
| AluI | AGCT | 3 cut(s) | 24, 42, 265 |
| Alw26I | GTCTC | 2 cut(s) | 256, 484 |
| AoxI | GGCC | 3 cut(s) | 213, 348, 412 |
| AspLEI | GCGC | 1 cut(s) | 389 |
| AspS9I | GGNCC | 1 cut(s) | 148 |
| AsuHPI | GGTGA | 1 cut(s) | 19 |
| AvaII | GGWCC | 1 cut(s) | 148 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 493 |
| BanI | GGYRCC | 1 cut(s) | 386 |
| BbvCI | CCTCAGC | 1 cut(s) | 266 |
| BccI | CCATC | 1 cut(s) | 406 |
| BciVI | GTATCC | 1 cut(s) | 268 |
| BcoDI | GTCTC | 2 cut(s) | 256, 484 |
| BfmI | CTRYAG | 3 cut(s) | 87, 130, 505 |
| BfoI | RGCGCY | 1 cut(s) | 390 |
| BfuI | GTATCC | 1 cut(s) | 268 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 66, 212 |
| BisI | GCNGC | 2 cut(s) | 207, 372 |
| BlsI | GCNGC | 2 cut(s) | 208, 373 |
| BmcAI | AGTACT | 1 cut(s) | 511 |
| Bme18I | GGWCC | 1 cut(s) | 148 |
| BmgBI | CACGTC | 1 cut(s) | 494 |
| BmgT120I | GGNCC | 1 cut(s) | 148 |
| BmiI | GGNNCC | 3 cut(s) | 49, 59, 388 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BpmI | CTGGAG | 1 cut(s) | 351 |
| Bpu10I | CCTNAGC | 2 cut(s) | 210, 266 |
| BsaHI | GRCGYC | 3 cut(s) | 204, 249, 387 |
| BsaWI | WCCGGW | 2 cut(s) | 28, 121 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 79, 109 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 424 |
| Bse118I | RCCGGY | 1 cut(s) | 4 |
| Bse1I | ACTGG | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 424 |
| BseMII | CTCAG | 2 cut(s) | 224, 257 |
| BseNI | ACTGG | 1 cut(s) | 216 |
| BshFI | GGCC | 3 cut(s) | 215, 350, 414 |
| BshNI | GGYRCC | 1 cut(s) | 386 |
| BsiSI | CCGG | 5 cut(s) | 5, 29, 51, 73, 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 424 |
| BsmAI | GTCTC | 2 cut(s) | 256, 484 |
| BsmBI | CGTCTC | 2 cut(s) | 256, 484 |
| BsnI | GGCC | 3 cut(s) | 215, 350, 414 |
| Bsp143I | GATC | 1 cut(s) | 229 |
| BspACI | CCGC | 4 cut(s) | 54, 207, 371, 499 |
| BspANI | GGCC | 3 cut(s) | 215, 350, 414 |
| BspCNI | CTCAG | 2 cut(s) | 223, 258 |
| BspLI | GGNNCC | 3 cut(s) | 49, 59, 388 |
| BspMAI | CTGCAG | 2 cut(s) | 134, 509 |
| BspT107I | GGYRCC | 1 cut(s) | 386 |
| BsrBI | CCGCTC | 2 cut(s) | 209, 499 |
| BsrFI | RCCGGY | 1 cut(s) | 4 |
| BsrI | ACTGG | 1 cut(s) | 216 |
| BssAI | RCCGGY | 1 cut(s) | 4 |
| BssMI | GATC | 1 cut(s) | 229 |
| BssNI | GRCGYC | 3 cut(s) | 204, 249, 387 |
| Bst4CI | ACNGT | 4 cut(s) | 91, 280, 336, 476 |
| BstACI | GRCGYC | 3 cut(s) | 204, 249, 387 |
| BstC8I | GCNNGC | 1 cut(s) | 104 |
| BstDEI | CTNAG | 3 cut(s) | 210, 266, 481 |
| BstF5I | GGATG | 1 cut(s) | 69 |
| BstH2I | RGCGCY | 1 cut(s) | 390 |
| BstHHI | GCGC | 1 cut(s) | 389 |
| BstKTI | GATC | 1 cut(s) | 232 |
| BstMAI | GTCTC | 2 cut(s) | 256, 484 |
| BstMBI | GATC | 1 cut(s) | 229 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 66, 212 |
| BstSFI | CTRYAG | 3 cut(s) | 87, 130, 505 |
| BsuI | GTATCC | 1 cut(s) | 268 |
| BsuRI | GGCC | 3 cut(s) | 215, 350, 414 |
| BtrI | CACGTC | 1 cut(s) | 494 |
| BtsCI | GGATG | 1 cut(s) | 69 |
| BtsI | GCAGTG | 2 cut(s) | 139, 187 |
| BtsIMutI | CAGTG | 3 cut(s) | 139, 187, 341 |
| Cac8I | GCNNGC | 1 cut(s) | 104 |
| CfoI | GCGC | 1 cut(s) | 389 |
| Cfr10I | RCCGGY | 1 cut(s) | 4 |
| Cfr13I | GGNCC | 1 cut(s) | 148 |
| CseI | GACGC | 1 cut(s) | 212 |
| Csp6I | GTAC | 3 cut(s) | 358, 502, 510 |
| CviQI | GTAC | 3 cut(s) | 358, 502, 510 |
| DdeI | CTNAG | 3 cut(s) | 210, 266, 481 |
| DinI | GGCGCC | 1 cut(s) | 388 |
| DpnI | GATC | 1 cut(s) | 231 |
| DpnII | GATC | 1 cut(s) | 229 |
| Eco147I | AGGCCT | 1 cut(s) | 350 |
| Eco47I | GGWCC | 1 cut(s) | 148 |
| EcoO109I | RGGNCCY | 1 cut(s) | 148 |
| EgeI | GGCGCC | 1 cut(s) | 388 |
| EheI | GGCGCC | 1 cut(s) | 388 |
| Esp3I | CGTCTC | 2 cut(s) | 256, 484 |
| FaiI | YATR | 5 cut(s) | 66, 142, 294, 300, 311 |
| FauI | CCCGC | 1 cut(s) | 47 |
| Fnu4HI | GCNGC | 2 cut(s) | 207, 372 |
| FokI | GGATG | 1 cut(s) | 56 |
| Fsp4HI | GCNGC | 2 cut(s) | 207, 372 |
| GlaI | GCGC | 1 cut(s) | 388 |
| GluI | GCNGC | 2 cut(s) | 207, 372 |
| GsuI | CTGGAG | 1 cut(s) | 351 |
| HaeII | RGCGCY | 1 cut(s) | 390 |
| HaeIII | GGCC | 3 cut(s) | 215, 350, 414 |
| HapII | CCGG | 5 cut(s) | 5, 29, 51, 73, 122 |
| HgaI | GACGC | 1 cut(s) | 212 |
| HhaI | GCGC | 1 cut(s) | 389 |
| Hin1I | GRCGYC | 3 cut(s) | 204, 249, 387 |
| Hin6I | GCGC | 1 cut(s) | 387 |
| HinP1I | GCGC | 1 cut(s) | 387 |
| HinfI | GANTC | 4 cut(s) | 167, 172, 313, 466 |
| HpaII | CCGG | 5 cut(s) | 5, 29, 51, 73, 122 |
| HphI | GGTGA | 1 cut(s) | 19 |
| Hpy166II | GTNNAC | 2 cut(s) | 10, 360 |
| Hpy188III | TCNNGA | 3 cut(s) | 146, 320, 344 |
| Hpy8I | GTNNAC | 2 cut(s) | 10, 360 |
| Hpy99I | CGWCG | 1 cut(s) | 206 |
| HpyAV | CCTTC | 2 cut(s) | 123, 128 |
| HpyCH4III | ACNGT | 4 cut(s) | 91, 280, 336, 476 |
| HpyCH4IV | ACGT | 2 cut(s) | 249, 493 |
| HpyCH4V | TGCA | 3 cut(s) | 132, 339, 507 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 66, 212 |
| HpyF3I | CTNAG | 3 cut(s) | 210, 266, 481 |
| HpySE526I | ACGT | 2 cut(s) | 249, 493 |
| Hsp92I | GRCGYC | 3 cut(s) | 204, 249, 387 |
| HspAI | GCGC | 1 cut(s) | 387 |
| KasI | GGCGCC | 1 cut(s) | 386 |
| Kzo9I | GATC | 1 cut(s) | 229 |
| LmnI | GCTCC | 3 cut(s) | 53, 57, 100 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeII | ACGT | 2 cut(s) | 249, 493 |
| MalI | GATC | 1 cut(s) | 231 |
| MbiI | CCGCTC | 2 cut(s) | 209, 499 |
| MboI | GATC | 1 cut(s) | 229 |
| MboII | GAAGA | 1 cut(s) | 308 |
| MluCI | AATT | 1 cut(s) | 193 |
| Mly113I | GGCGCC | 1 cut(s) | 387 |
| MlyI | GAGTC | 2 cut(s) | 176, 181 |
| MmeI | TCCRAC | 1 cut(s) | 328 |
| MnlI | CCTC | 9 cut(s) | 117, 148, 161, 180, 261, 265, 340, 425, 429 |
| MspA1I | CMGCKG | 1 cut(s) | 371 |
| MspI | CCGG | 5 cut(s) | 5, 29, 51, 73, 122 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 66, 212 |
| NarI | GGCGCC | 1 cut(s) | 387 |
| NdeII | GATC | 1 cut(s) | 229 |
| NlaIV | GGNNCC | 3 cut(s) | 49, 59, 388 |
| PceI | AGGCCT | 1 cut(s) | 350 |
| PfeI | GAWTC | 2 cut(s) | 313, 466 |
| PkrI | GCNGC | 2 cut(s) | 208, 373 |
| PleI | GAGTC | 2 cut(s) | 175, 180 |
| PluTI | GGCGCC | 1 cut(s) | 390 |
| PpsI | GAGTC | 2 cut(s) | 175, 180 |
| PpuMI | RGGWCCY | 1 cut(s) | 148 |
| Psp5II | RGGWCCY | 1 cut(s) | 148 |
| PspN4I | GGNNCC | 3 cut(s) | 49, 59, 388 |
| PspPI | GGNCC | 1 cut(s) | 148 |
| PspPPI | RGGWCCY | 1 cut(s) | 148 |
| PstI | CTGCAG | 2 cut(s) | 134, 509 |
| RsaI | GTAC | 3 cut(s) | 359, 503, 511 |
| RsaNI | GTAC | 3 cut(s) | 358, 502, 510 |
| SatI | GCNGC | 2 cut(s) | 207, 372 |
| Sau3AI | GATC | 1 cut(s) | 229 |
| Sau96I | GGNCC | 1 cut(s) | 148 |
| ScaI | AGTACT | 1 cut(s) | 511 |
| SchI | GAGTC | 2 cut(s) | 176, 181 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| SfcI | CTRYAG | 3 cut(s) | 87, 130, 505 |
| SfoI | GGCGCC | 1 cut(s) | 388 |
| SinI | GGWCC | 1 cut(s) | 148 |
| Sse9I | AATT | 1 cut(s) | 193 |
| SseBI | AGGCCT | 1 cut(s) | 350 |
| SsiI | CCGC | 4 cut(s) | 54, 207, 371, 499 |
| SspDI | GGCGCC | 1 cut(s) | 386 |
| StuI | AGGCCT | 1 cut(s) | 350 |
| TaaI | ACNGT | 4 cut(s) | 91, 280, 336, 476 |
| TaiI | ACGT | 2 cut(s) | 252, 496 |
| TaqI | TCGA | 3 cut(s) | 38, 170, 175 |
| TasI | AATT | 1 cut(s) | 193 |
| TatI | WGTACW | 2 cut(s) | 357, 509 |
| TauI | GCSGC | 2 cut(s) | 209, 374 |
| TfiI | GAWTC | 2 cut(s) | 313, 466 |
| TscAI | CASTG | 3 cut(s) | 139, 187, 341 |
| TspDTI | ATGAA | 2 cut(s) | 326, 339 |
| TspRI | CASTG | 3 cut(s) | 139, 187, 341 |
| VpaK11BI | GGWCC | 1 cut(s) | 148 |
| ZraI | GACGTC | 1 cut(s) | 250 |
| ZrmI | AGTACT | 1 cut(s) | 511 |