Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000517.1

Orthogroup ID

OG0010990

Physical Location & Seq

Genomic Coordinates Forward (+)

2129 .. 9933

Gene Structure 7805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000517.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

atggatttgaatgcctcgccattacctgaagatgatgaagagacttttgaagaatacaatgcaaaggattacagtgcacaggactacagtgcacaggaatatagcgcgccacaagaacacgtagaatctggagtggatatattacgccgggagcgtgaagaaagacgtaagcgattgaaacgagaccgtccagatgatagaccagtgcctgcatctcaaccccctgcatatgaatcgtatcaagcaaaatttgccaaggtcgacacatcaaggcttccttctggttggttggattgcccatcatctggtcaagaaatttattgcatgataccttctaaggtgccattgtgtgaatcctacaatgattgtgttcctcctggtagaagatactcatttaaacaagtcatccatcaacaaagagttttgggaagaaaacttggtttggtgattgatttgacaaatacaactcgttactatcaaacgacagatttgaagaaagagggtattaagcatattaagattccgtgcaagggacgggattctgtacctgacaacccttccgtgaatcagtttgtatatgaggttatgcaattcatgacccgacagaaacacaccaagaagtatattcttgtccactgtactcatgggcacaatcgcacagggtatatgatcatccattacctaatgcgcaccttaccaatttcagtcgctcaggccataaaaacttttgctgatgcacgcccacctggaatctataaacccgactatattgatgcattgtactcgttctatcacgaaaggaagcccgaaatggttgtatgtccatcaactcctgaatggaagagatcctccgaatttgatcttaatggtgaagcagttgcagatgatgatgatgatggaggtccagctgctccttctcatgagaatcaggaaacggatggagtaatgacaaatgatgatatcttgggggatgaaatacctcgcgatcagcaagaggcaatgcggcagttctgctatcagtcacttaagctgcctcctgggaaaagaggaaacgcacaatttccagggtcacacccagtttctcttagcagggacaacttacagctattgaggcaacgttattattatgctacatggaaagctgatggaacaagatatatgatgttaataactatggatggatgtttcttgattgataggagttttaattttaggagggtacaaatgaggtttccctgcaaacacacaaatgatgtttcagctgataaggttcaccacttcacgttattggatggggagatggtaattgatactgtgccagattcacagaagcaagagagaagataccttatctatgatatgatggcgatcaaccatgtttctctcatagagcggccattttatgagcggtggaagatgcttgagaaagaggtcatagagcctcggaatcatgagcgccacaatatctaccaaagtaggaatccttactatagatatgacttagaaccattcagggtaaggaggaaggacttttggttgctctctacggttaccaaacttttgaaggaattcattccaaagctttcacatgaggctgatggtcttatttttcagggctgggatgatccatatgttccccgtacacatgaaggacttctaaagtggaaatatcctgaaatgaactcggtggattttctgtttgaggttggtgaagacgatcgacaactgctttttctatacgaacatggaaagaagaaactaatggaaggaaatagggttgcatttaaagatggttcagacagctccttttattcaggaaaaatagtagaatgttcttgggatatggaagcaaatgtatgggtctgtatgcgcgtcagggtcgataaatccactcccaatgatttcaatacctacagaaaggttatgaaaagcataaaggataatattacgcaggacgtcttgttggacgagatatatgagatcattcgtctgcctatgtatgctgataggatacggaatgacagcaaagcagcccagcagcatttagcacggcggaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

686

Amino Acids

80.62

Weight (kDa)

6.62

Isoelectric Point (pI)

48.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09100 AT3G09100
fragaria_vesca	FvH4_6g12120 FvH4_6g12120 FvH4_6g12120
malus_domestica	MD04G1146600.v1.1 MD12G1159800.v1.1
prunus_persica	Prupe.6G270400_v2.0.a1
pyrus_communis	pycom04g13230 pycom12g15160
rosa_chinensis	RchiOBHm_Chr3g0463921
rosa_laevigata	RLG00000024736
rosa_multiflora	Rmu_sc0000517.1_g000001
rosa_roxburghii	Rroxscaffold_6G00416140
rosa_rugosa	Rorug03G0069200
rosa_samantha	Rh3AG126200 Rh3BG130200 Rh3CG132700 Rh3DG131400
rosa_wichuraiana	Rw3G010650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1959
Acc16I	TGCGCA	1 cut(s)	689
AccB1I	GGYRCC	1 cut(s)	340
AccB7I	CCANNNNNTGG	1 cut(s)	305
AccBSI	CCGCTC	2 cut(s)	1393, 1408
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	3 cut(s)	107, 984, 1872
AciI	CCGC	4 cut(s)	1003, 1393, 1408, 2053
AclI	AACGTT	1 cut(s)	1117
AclWI	GGATC	2 cut(s)	840, 1619
AcoI	YGGCCR	1 cut(s)	1394
AcsI	RAATTY	4 cut(s)	248, 315, 854, 1568
AcuI	CTGAAG	1 cut(s)	48
AcyI	GRCGYC	1 cut(s)	1956
AfaI	GTAC	5 cut(s)	546, 640, 782, 1221, 1642
AfiI	CCNNNNNNNGG	2 cut(s)	305, 530
AflII	CTTAAG	1 cut(s)	1025
AflIII	ACRYGT	1 cut(s)	118
AgsI	TTSAA	6 cut(s)	10, 50, 178, 493, 1564, 1906
AjnI	CCWGG	4 cut(s)	376, 745, 1036, 1063
AluBI	AGCT	7 cut(s)	908, 1030, 1105, 1142, 1262, 1582, 1803
AluI	AGCT	7 cut(s)	908, 1030, 1105, 1142, 1262, 1582, 1803
Alw21I	GWGCWC	2 cut(s)	79, 94
Alw26I	GTCTC	2 cut(s)	35, 177
Alw44I	GTGCAC	2 cut(s)	75, 90
AlwI	GGATC	2 cut(s)	840, 1619
AlwNI	CAGNNNCTG	1 cut(s)	209
AoxI	GGCC	2 cut(s)	714, 1394
ApaLI	GTGCAC	2 cut(s)	75, 90
ApeKI	GCWGC	4 cut(s)	908, 1030, 2030, 2038
ApoI	RAATTY	4 cut(s)	248, 315, 854, 1568
Asp700I	GAANNNNTTC	3 cut(s)	1568, 1572, 1653
AspLEI	GCGC	5 cut(s)	107, 109, 690, 1458, 1872
AspS9I	GGNCC	1 cut(s)	902
AsuC2I	CCSGG	1 cut(s)	149
AsuHPI	GGTGA	4 cut(s)	457, 881, 1265, 1721
AvaII	GGWCC	1 cut(s)	902
BaeGI	GKGCMC	3 cut(s)	79, 94, 651
BanI	GGYRCC	1 cut(s)	340
BbsI	GAAGAC	1 cut(s)	1719
Bbv12I	GWGCWC	2 cut(s)	79, 94
BbvI	GCAGC	4 cut(s)	895, 1017, 2042, 2050
BcgI	CGANNNNNNTGC	4 cut(s)	216, 250, 765, 799
BciT130I	CCWGG	4 cut(s)	378, 747, 1038, 1065
BciVI	GTATCC	1 cut(s)	2004
BclI	TGATCA	1 cut(s)	669
BcnI	CCSGG	1 cut(s)	149
BcoDI	GTCTC	2 cut(s)	35, 177
BfmI	CTRYAG	3 cut(s)	85, 1489, 1912
BfoI	RGCGCY	1 cut(s)	1459
BfrI	CTTAAG	1 cut(s)	1025
BfuI	GTATCC	1 cut(s)	2004
BisI	GCNGC	6 cut(s)	909, 1004, 1031, 1394, 2031, 2039
BlsI	GCNGC	6 cut(s)	910, 1005, 1032, 1395, 2032, 2040
Bme1390I	CCNGG	5 cut(s)	149, 378, 747, 1038, 1065
Bme18I	GGWCC	1 cut(s)	902
BmgT120I	GGNCC	1 cut(s)	902
BmiI	GGNNCC	1 cut(s)	342
BmrFI	CCNGG	5 cut(s)	149, 378, 747, 1038, 1065
BmrI	ACTGGG	1 cut(s)	1070
BmsI	GCATC	4 cut(s)	221, 724, 763, 1407
BmuI	ACTGGG	1 cut(s)	1070
BpiI	GAAGAC	1 cut(s)	1719
BpmI	CTGGAG	1 cut(s)	150
Bpu10I	CCTNAGC	1 cut(s)	711
BpuEI	CTTGAG	1 cut(s)	1442
BpuMI	CCSGG	1 cut(s)	149
BsaAI	YACGTR	1 cut(s)	121
BsaBI	GATNNNNATC	1 cut(s)	1367
BsaHI	GRCGYC	1 cut(s)	1956
BsaI	GGTCTC	1 cut(s)	177
BsaJI	CCNNGG	4 cut(s)	255, 1037, 1064, 1442
Bsc4I	CCNNNNNNNGG	2 cut(s)	305, 530
Bse1I	ACTGG	2 cut(s)	203, 1076
Bse3DI	GCAATG	1 cut(s)	1005
Bse8I	GATNNNNATC	1 cut(s)	1367
BseBI	CCWGG	4 cut(s)	378, 747, 1038, 1065
BseDI	CCNNGG	4 cut(s)	255, 1037, 1064, 1442
BseGI	GGATG	8 cut(s)	405, 672, 943, 976, 1183, 1187, 1297, 1627
BseJI	GATNNNNATC	1 cut(s)	1367
BseLI	CCNNNNNNNGG	2 cut(s)	305, 530
BseMI	GCAATG	1 cut(s)	1005
BseMII	CTCAG	1 cut(s)	725
BseNI	ACTGG	2 cut(s)	203, 1076
BsePI	GCGCGC	1 cut(s)	105
BseSI	GKGCMC	3 cut(s)	79, 94, 651
BseXI	GCAGC	4 cut(s)	895, 1017, 2042, 2050
BseYI	CCCAGC	2 cut(s)	1617, 2034
Bsh1236I	CGCG	3 cut(s)	107, 984, 1872
Bsh1285I	CGRYCG	1 cut(s)	1720
BshFI	GGCC	2 cut(s)	716, 1396
BshNI	GGYRCC	1 cut(s)	340
BsiEI	CGRYCG	1 cut(s)	1720
BsiHKAI	GWGCWC	2 cut(s)	79, 94
BsiSI	CCGG	1 cut(s)	148
BslFI	GGGAC	2 cut(s)	546, 1106
BslI	CCNNNNNNNGG	2 cut(s)	305, 530
BsmAI	GTCTC	2 cut(s)	35, 177
BsmFI	GGGAC	2 cut(s)	546, 1106
BsmI	GAATGC	1 cut(s)	16
BsnI	GGCC	2 cut(s)	716, 1396
Bso31I	GGTCTC	1 cut(s)	177
Bsp1286I	GDGCHC	3 cut(s)	79, 94, 651
Bsp143I	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
Bsp68I	TCGCGA	1 cut(s)	984
BspACI	CCGC	4 cut(s)	1003, 1393, 1408, 2053
BspANI	GGCC	2 cut(s)	716, 1396
BspCNI	CTCAG	1 cut(s)	724
BspFNI	CGCG	3 cut(s)	107, 984, 1872
BspHI	TCATGA	3 cut(s)	594, 919, 1450
BspLI	GGNNCC	1 cut(s)	342
BspPI	GGATC	2 cut(s)	840, 1619
BspT107I	GGYRCC	1 cut(s)	340
BspTI	CTTAAG	1 cut(s)	1025
BspTNI	GGTCTC	1 cut(s)	177
BsrBI	CCGCTC	2 cut(s)	1393, 1408
BsrDI	GCAATG	1 cut(s)	1005
BsrI	ACTGG	2 cut(s)	203, 1076
BssECI	CCNNGG	4 cut(s)	255, 1037, 1064, 1442
BssHII	GCGCGC	1 cut(s)	105
BssMI	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
BssNI	GRCGYC	1 cut(s)	1956
BssT1I	CCWWGG	1 cut(s)	255
Bst2UI	CCWGG	4 cut(s)	378, 747, 1038, 1065
Bst4CI	ACNGT	6 cut(s)	74, 89, 188, 638, 1315, 1549
Bst6I	CTCTTC	2 cut(s)	33, 836
BstACI	GRCGYC	1 cut(s)	1956
BstAFI	CTTAAG	1 cut(s)	1025
BstAPI	GCANNNNNTGC	1 cut(s)	251
BstBAI	YACGTR	1 cut(s)	121
BstC8I	GCNNGC	3 cut(s)	107, 210, 739
BstDEI	CTNAG	4 cut(s)	336, 711, 1085, 1501
BstEII	GGTNACC	1 cut(s)	1549
BstF5I	GGATG	8 cut(s)	405, 672, 943, 976, 1183, 1187, 1297, 1627
BstFNI	CGCG	3 cut(s)	107, 984, 1872
BstH2I	RGCGCY	1 cut(s)	1459
BstHHI	GCGC	5 cut(s)	107, 109, 690, 1458, 1872
BstKTI	GATC	8 cut(s)	672, 848, 862, 988, 1371, 1627, 1720, 1983
BstMAI	GTCTC	2 cut(s)	35, 177
BstMBI	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
BstMCI	CGRYCG	1 cut(s)	1720
BstMWI	GCNNNNNNNGC	2 cut(s)	251, 1111
BstNI	CCWGG	4 cut(s)	378, 747, 1038, 1065
BstPI	GGTNACC	1 cut(s)	1549
BstSCI	CCNGG	5 cut(s)	147, 376, 745, 1036, 1063
BstSFI	CTRYAG	3 cut(s)	85, 1489, 1912
BstSLI	GKGCMC	3 cut(s)	79, 94, 651
BstUI	CGCG	3 cut(s)	107, 984, 1872
BstV1I	GCAGC	4 cut(s)	895, 1017, 2042, 2050
BstV2I	GAAGAC	1 cut(s)	1719
BstX2I	RGATCY	1 cut(s)	845
BstYI	RGATCY	1 cut(s)	845
BsuI	GTATCC	1 cut(s)	2004
BsuRI	GGCC	2 cut(s)	716, 1396
BtsCI	GGATG	8 cut(s)	405, 672, 943, 976, 1183, 1187, 1297, 1627
BtsIMutI	CAGTG	4 cut(s)	79, 94, 210, 634
BtuMI	TCGCGA	1 cut(s)	984
Cac8I	GCNNGC	3 cut(s)	107, 210, 739
CaiI	CAGNNNCTG	1 cut(s)	209
CciI	TCATGA	3 cut(s)	594, 919, 1450
CfoI	GCGC	5 cut(s)	107, 109, 690, 1458, 1872
Cfr13I	GGNCC	1 cut(s)	902
CseI	GACGC	1 cut(s)	1861
Csp6I	GTAC	5 cut(s)	545, 639, 781, 1220, 1641
CviQI	GTAC	5 cut(s)	545, 639, 781, 1220, 1641
DdeI	CTNAG	4 cut(s)	336, 711, 1085, 1501
DpnI	GATC	8 cut(s)	671, 847, 861, 987, 1370, 1626, 1719, 1982
DpnII	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
DraI	TTTAAA	2 cut(s)	397, 1786
EaeI	YGGCCR	1 cut(s)	1394
Eam1104I	CTCTTC	2 cut(s)	33, 836
EarI	CTCTTC	2 cut(s)	33, 836
Eco130I	CCWWGG	1 cut(s)	255
Eco31I	GGTCTC	1 cut(s)	177
Eco32I	GATATC	1 cut(s)	961
Eco47I	GGWCC	1 cut(s)	902
Eco57I	CTGAAG	1 cut(s)	48
Eco91I	GGTNACC	1 cut(s)	1549
EcoO65I	GGTNACC	1 cut(s)	1549
EcoRI	GAATTC	1 cut(s)	1568
EcoRII	CCWGG	4 cut(s)	376, 745, 1036, 1063
EcoRV	GATATC	1 cut(s)	961
EcoT14I	CCWWGG	1 cut(s)	255
EcoT22I	ATGCAT	1 cut(s)	778
ErhI	CCWWGG	1 cut(s)	255
FalI	AAGNNNNNCTT	2 cut(s)	262, 294
FaqI	GGGAC	2 cut(s)	546, 1106
FauNDI	CATATG	2 cut(s)	229, 1630
FbaI	TGATCA	1 cut(s)	669
FblI	GTMKAC	1 cut(s)	261
Fnu4HI	GCNGC	6 cut(s)	909, 1004, 1031, 1394, 2031, 2039
FokI	GGATG	8 cut(s)	392, 659, 950, 983, 1190, 1194, 1304, 1634
Fsp4HI	GCNGC	6 cut(s)	909, 1004, 1031, 1394, 2031, 2039
FspAI	RTGCGCAY	1 cut(s)	689
FspI	TGCGCA	1 cut(s)	689
GlaI	GCGC	5 cut(s)	106, 108, 689, 1457, 1871
GluI	GCNGC	6 cut(s)	909, 1004, 1031, 1394, 2031, 2039
GsaI	CCCAGC	2 cut(s)	1621, 2038
GsuI	CTGGAG	1 cut(s)	150
HaeII	RGCGCY	1 cut(s)	1459
HaeIII	GGCC	2 cut(s)	716, 1396
HapII	CCGG	1 cut(s)	148
HgaI	GACGC	1 cut(s)	1861
HhaI	GCGC	5 cut(s)	107, 109, 690, 1458, 1872
Hin1I	GRCGYC	1 cut(s)	1956
Hin6I	GCGC	5 cut(s)	105, 107, 688, 1456, 1870
HinP1I	GCGC	5 cut(s)	105, 107, 688, 1456, 1870
HincII	GTYRAC	1 cut(s)	262
HindII	GTYRAC	1 cut(s)	262
HindIII	AAGCTT	1 cut(s)	1580
HpaII	CCGG	1 cut(s)	148
HphI	GGTGA	4 cut(s)	457, 881, 1265, 1721
Hpy166II	GTNNAC	6 cut(s)	77, 92, 262, 634, 1273, 1643
Hpy188I	TCNGA	3 cut(s)	853, 1446, 1798
Hpy8I	GTNNAC	6 cut(s)	77, 92, 262, 634, 1273, 1643
HpyAV	CCTTC	8 cut(s)	288, 342, 567, 924, 1519, 1558, 1643, 1760
HpyCH4III	ACNGT	6 cut(s)	74, 89, 188, 638, 1315, 1549
HpyCH4IV	ACGT	5 cut(s)	120, 166, 1117, 1283, 1956
HpyF10VI	GCNNNNNNNGC	2 cut(s)	251, 1111
HpyF3I	CTNAG	4 cut(s)	336, 711, 1085, 1501
HpySE526I	ACGT	5 cut(s)	120, 166, 1117, 1283, 1956
Hsp92I	GRCGYC	1 cut(s)	1956
HspAI	GCGC	5 cut(s)	105, 107, 688, 1456, 1870
Ksp22I	TGATCA	1 cut(s)	669
Kzo9I	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
LmnI	GCTCC	3 cut(s)	151, 916, 1808
Lsp1109I	GCAGC	4 cut(s)	895, 1017, 2042, 2050
LweI	GCATC	4 cut(s)	221, 724, 763, 1407
MaeII	ACGT	5 cut(s)	120, 166, 1117, 1283, 1956
MaeIII	GTNAC	4 cut(s)	470, 1020, 1068, 1549
MalI	GATC	8 cut(s)	671, 847, 861, 987, 1370, 1626, 1719, 1982
MbiI	CCGCTC	2 cut(s)	1393, 1408
MboI	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
MflI	RGATCY	1 cut(s)	845
MhlI	GDGCHC	3 cut(s)	79, 94, 651
MluCI	AATT	9 cut(s)	248, 315, 590, 699, 854, 1058, 1207, 1305, 1568
MmeI	TCCRAC	2 cut(s)	270, 1944
Mph1103I	ATGCAT	1 cut(s)	778
MroXI	GAANNNNTTC	3 cut(s)	1568, 1572, 1653
MseI	TTAA	8 cut(s)	396, 507, 516, 864, 1026, 1166, 1206, 1785
MslI	CAYNNNNRTG	1 cut(s)	1248
MspA1I	CMGCKG	2 cut(s)	908, 1262
MspCI	CTTAAG	1 cut(s)	1025
MspI	CCGG	1 cut(s)	148
MspR9I	CCNGG	5 cut(s)	149, 378, 747, 1038, 1065
Mva1269I	GAATGC	1 cut(s)	16
MvaI	CCWGG	4 cut(s)	378, 747, 1038, 1065
MvnI	CGCG	3 cut(s)	107, 984, 1872
MwoI	GCNNNNNNNGC	2 cut(s)	251, 1111
NciI	CCSGG	1 cut(s)	149
NdeI	CATATG	2 cut(s)	229, 1630
NdeII	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
NlaIV	GGNNCC	1 cut(s)	342
NmuCI	GTSAC	2 cut(s)	1020, 1068
NruI	TCGCGA	1 cut(s)	984
NsbI	TGCGCA	1 cut(s)	689
NsiI	ATGCAT	1 cut(s)	778
PagI	TCATGA	3 cut(s)	594, 919, 1450
PauI	GCGCGC	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	1 cut(s)	151
PctI	GAATGC	1 cut(s)	16
PdmI	GAANNNNTTC	3 cut(s)	1568, 1572, 1653
PflMI	CCANNNNNTGG	1 cut(s)	305
PkrI	GCNGC	6 cut(s)	910, 1005, 1032, 1395, 2032, 2040
Ple19I	CGATCG	1 cut(s)	1720
Ppu21I	YACGTR	1 cut(s)	121
Psp1406I	AACGTT	1 cut(s)	1117
Psp6I	CCWGG	4 cut(s)	376, 745, 1036, 1063
PspEI	GGTNACC	1 cut(s)	1549
PspFI	CCCAGC	2 cut(s)	1617, 2034
PspGI	CCWGG	4 cut(s)	376, 745, 1036, 1063
PspN4I	GGNNCC	1 cut(s)	342
PspPI	GGNCC	1 cut(s)	902
PstNI	CAGNNNCTG	1 cut(s)	209
PsuI	RGATCY	1 cut(s)	845
PteI	GCGCGC	1 cut(s)	105
PvuI	CGATCG	1 cut(s)	1720
PvuII	CAGCTG	2 cut(s)	908, 1262
RruI	TCGCGA	1 cut(s)	984
RsaI	GTAC	5 cut(s)	546, 640, 782, 1221, 1642
RsaNI	GTAC	5 cut(s)	545, 639, 781, 1220, 1641
RseI	CAYNNNNRTG	1 cut(s)	1248
SalI	GTCGAC	1 cut(s)	260
SaqAI	TTAA	8 cut(s)	396, 507, 516, 864, 1026, 1166, 1206, 1785
SatI	GCNGC	6 cut(s)	909, 1004, 1031, 1394, 2031, 2039
Sau3AI	GATC	8 cut(s)	669, 845, 859, 985, 1368, 1624, 1717, 1980
Sau96I	GGNCC	1 cut(s)	902
ScrFI	CCNGG	5 cut(s)	149, 378, 747, 1038, 1065
SduI	GDGCHC	3 cut(s)	79, 94, 651
SfaNI	GCATC	4 cut(s)	221, 724, 763, 1407
SfcI	CTRYAG	3 cut(s)	85, 1489, 1912
SinI	GGWCC	1 cut(s)	902
SmiMI	CAYNNNNRTG	1 cut(s)	1248
SmlI	CTYRAG	2 cut(s)	1025, 1421
SmoI	CTYRAG	2 cut(s)	1025, 1421
Sse9I	AATT	9 cut(s)	248, 315, 590, 699, 854, 1058, 1207, 1305, 1568
SsiI	CCGC	4 cut(s)	1003, 1393, 1408, 2053
SspI	AATATT	1 cut(s)	1945
StyD4I	CCNGG	5 cut(s)	147, 376, 745, 1036, 1063
StyI	CCWWGG	1 cut(s)	255
TaaI	ACNGT	6 cut(s)	74, 89, 188, 638, 1315, 1549
TaiI	ACGT	5 cut(s)	123, 169, 1120, 1286, 1959
TaqI	TCGA	3 cut(s)	261, 1720, 1881
TasI	AATT	9 cut(s)	248, 315, 590, 699, 854, 1058, 1207, 1305, 1568
TatI	WGTACW	2 cut(s)	638, 780
TauI	GCSGC	2 cut(s)	1006, 1396
Tru1I	TTAA	8 cut(s)	396, 507, 516, 864, 1026, 1166, 1206, 1785
Tru9I	TTAA	8 cut(s)	396, 507, 516, 864, 1026, 1166, 1206, 1785
TscAI	CASTG	4 cut(s)	79, 94, 210, 641
TseFI	GTSAC	2 cut(s)	1020, 1068
TseI	GCWGC	4 cut(s)	908, 1030, 2030, 2038
Tsp45I	GTSAC	2 cut(s)	1020, 1068
TspDTI	ATGAA	8 cut(s)	51, 246, 583, 987, 1561, 1662, 1694, 1940
TspGWI	ACGGA	4 cut(s)	513, 550, 950, 2029
TspRI	CASTG	4 cut(s)	79, 94, 210, 641
Van91I	CCANNNNNTGG	1 cut(s)	305
Vha464I	CTTAAG	1 cut(s)	1025
VneI	GTGCAC	2 cut(s)	75, 90
VpaK11BI	GGWCC	1 cut(s)	902
XapI	RAATTY	4 cut(s)	248, 315, 854, 1568
XcmI	CCANNNNNNNNNTGG	1 cut(s)	641
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	3 cut(s)	1568, 1572, 1653
ZraI	GACGTC	1 cut(s)	1957
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.