Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0010990

Physical Location & Seq

Genomic Coordinates Forward (+)

38194616 .. 38203516

Gene Structure 8901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00416140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGATTGTTGCAATGGATTTGAATGCCTCACCATTACCTGAAGATGATGAAGAGACTTTTGAAGAATACAATACAAAAGATTACAGTGCACAGGACTACAGTACACAGGAATACAGTGCACAGGAATATAGCGCACCACAAGAACACGTAGAATCTGGAGTGGATATATTACGCCGGGAGCGTGAAGAAAGACGTAAGCGATTGAAACGAGACCGCCCAGATGATAGACCAGTGCCTGCATCTCAAACCCCTGCATATGAATCGTATCAAGCAAAATTTGCCAAGGTCGACACATCAAGGCTTCCTTCTGGTTGGTTGGATTGCCCATCATCTGGTCAAGAAATTTGTTGCATGATACCTTCTAAGGTGCCATTGTGTGAATCCTACAATGATTGTGTTCCTCCTGGTAGAAGATACTCATTTAAACAAGTCATCCATCAACAAAGAGTTTTGGGAAGAAAACTTGGTTTGGTGATTGATTTGACAAATACAACTCGTTACTATCAAACGACAGATTTGAAGAAAGAGGGTATTAAGCATATTAAGATTCCGTGCAAGGGACGGGATTCTGTACCTGACAACCCTTCCGTGAATCAGTTTGTATATGAGGTTATGCAATTCATGACCCGACAGAAACACACCAAGAAGTATATTCTTGTCCACTGTACTCATGGGCACAATCGCACAGGGTATATGATCATCCATTACCTAATGCGCACCTTACCAATTTCGGTCACTCAGGCCATAAAAACTTTTGCTGATGCACGCCCACCTGGAATCTATAAACCCGACTATATTGATGCATTGTACTCGTTCTATCACGAAAGGAAGCCTGAAATAGTTGTATGTCCATCAACTCCTGAATGGAAGAGATCCTCCGAATTTGATCTTAATGGTGAAGCAGTTGCAGACGACGATGATGATGGAGGTCCAGCTGCTCCTTCTAATGAGAATCAGGAAACGGATGGAATAATGACAAATGATGATATCTTGGGGGATGAAATACCTCGCGATCAGCAAGAGGCAATGCGGCAGTTCTGCTATCAGTCCCTTAAGCTGCCTCCTGGGAAAAGAGGAAACGCACAATTTCCAGGGTCGCACCCAGTTTCTCTTAGCAGGGACAACTTACAGCTATTGAGGCAACGTTATTATTATGCTACATGGAAAGCTGATGGAACAAGATATATGATGTTAATAACTATGGATGGATGTTTCTTGATTGATAGGAGTTTTAATTTTAGGAGGGTACAAATGAGGTTTCCCTGCAAACACACAAATGATGTTTCAGCTGATAAGGTTCACCACTTCACGTTATTGGATGGGGAGATGGTAATTGATACTGTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATCTATGATATGATGGCGATCAACCATGTTTCTCTCATAGAGCGGCCATTTTATGAGCGGTGGAAGATGCTTGAGAAAGAGGTCATAGAGCCTCGGAATCATGAGCGCCACAATATCTACCAAAGTAGGAATCCTTACTATAGATATGACTTAGAACCATTCAGGGTGAGGAGGAAGGACTTTTGGTTGCTCTCTACGGTTACCAAACTTTTGAAGGAATTCATTCCAAAGCTTTCACATGAGGCCGATGGTCTTATTTTTCAGGGCTGGGATGATCCATATGTTCCCCGTACACATGAAGGACTTCTAAAGTGGAAATATCCTGAAATGAACTCGGTGGATTTTCTGTTTGAGGTTGGTGAAGACGATCGACAACTGCTTTTTCTATACGAACATGGAAAGAAGAAACTAATGGAAGGAAATAGGGTTGCATTTAAAGATGGTTCAGACAGCTCCTTTTATTCAGGAAAAATAGTAGAATGTTCTTGGGATATGGAAGCAAATGTATGGGTCTGTATGCGCGTCAGGGTCGATAAATCCACTCCCAATGATTTCAATACCTACAGAAAGGTTATGAAAAGCATAAAGGATAATATTACGCAGGACGTCTTGTTGGACGAGATATATGAGATCATTCGTCTGCCTATGTATGCTGATAGGATACGGAATGACAGCAAAGCAGCCCAGCAGCATTTAGCACGGCGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

695

Amino Acids

81.62

Weight (kDa)

6.5

Isoelectric Point (pI)

47.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	153 - 273	5e-16	Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme	PF01331	367 - 565	8.7e-77	mRNA capping enzyme, catalytic domain
mRNA_cap_C	PF03919	602 - 664	2.3e-18	mRNA capping enzyme, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09100 AT3G09100
fragaria_vesca	FvH4_6g12120 FvH4_6g12120 FvH4_6g12120
malus_domestica	MD04G1146600.v1.1 MD12G1159800.v1.1
prunus_persica	Prupe.6G270400_v2.0.a1
pyrus_communis	pycom04g13230 pycom12g15160
rosa_chinensis	RchiOBHm_Chr3g0463921
rosa_laevigata	RLG00000024736
rosa_multiflora	Rmu_sc0000517.1_g000001
rosa_roxburghii	Rroxscaffold_6G00416140
rosa_rugosa	Rorug03G0069200
rosa_samantha	Rh3AG126200 Rh3BG130200 Rh3CG132700 Rh3DG131400
rosa_wichuraiana	Rw3G010650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1986
Acc16I	TGCGCA	1 cut(s)	716
AccB1I	GGYRCC	1 cut(s)	367
AccB7I	CCANNNNNTGG	1 cut(s)	332
AccBSI	CCGCTC	2 cut(s)	1420, 1435
AccI	GTMKAC	1 cut(s)	288
AccII	CGCG	2 cut(s)	1011, 1899
AciI	CCGC	5 cut(s)	214, 1030, 1420, 1435, 2080
AclI	AACGTT	1 cut(s)	1144
AclWI	GGATC	2 cut(s)	867, 1646
AcoI	YGGCCR	1 cut(s)	1421
AcsI	RAATTY	4 cut(s)	275, 342, 881, 1595
AcuI	CTGAAG	1 cut(s)	60
AcyI	GRCGYC	1 cut(s)	1983
AfaI	GTAC	6 cut(s)	103, 573, 667, 809, 1248, 1669
AfiI	CCNNNNNNNGG	2 cut(s)	332, 557
AflII	CTTAAG	1 cut(s)	1052
AflIII	ACRYGT	1 cut(s)	145
AgsI	TTSAA	6 cut(s)	22, 62, 205, 520, 1591, 1933
AjnI	CCWGG	4 cut(s)	403, 772, 1063, 1090
AluBI	AGCT	7 cut(s)	935, 1057, 1132, 1169, 1289, 1609, 1830
AluI	AGCT	7 cut(s)	935, 1057, 1132, 1169, 1289, 1609, 1830
Alw21I	GWGCWC	2 cut(s)	91, 121
Alw26I	GTCTC	2 cut(s)	47, 204
Alw44I	GTGCAC	2 cut(s)	87, 117
AlwI	GGATC	2 cut(s)	867, 1646
AlwNI	CAGNNNCTG	1 cut(s)	236
AoxI	GGCC	3 cut(s)	741, 1421, 1620
ApaLI	GTGCAC	2 cut(s)	87, 117
ApeKI	GCWGC	4 cut(s)	935, 1057, 2057, 2065
ApoI	RAATTY	4 cut(s)	275, 342, 881, 1595
Asp700I	GAANNNNTTC	3 cut(s)	1595, 1599, 1680
AspLEI	GCGC	4 cut(s)	134, 717, 1485, 1899
AspS9I	GGNCC	1 cut(s)	929
AsuC2I	CCSGG	1 cut(s)	176
AsuHPI	GGTGA	6 cut(s)	21, 484, 908, 1292, 1555, 1748
AvaII	GGWCC	1 cut(s)	929
BaeGI	GKGCMC	3 cut(s)	91, 121, 678
BanI	GGYRCC	1 cut(s)	367
BbsI	GAAGAC	1 cut(s)	1746
Bbv12I	GWGCWC	2 cut(s)	91, 121
BbvI	GCAGC	4 cut(s)	922, 1044, 2069, 2077
BcgI	CGANNNNNNTGC	4 cut(s)	243, 277, 792, 826
BciT130I	CCWGG	4 cut(s)	405, 774, 1065, 1092
BciVI	GTATCC	1 cut(s)	2031
BclI	TGATCA	1 cut(s)	696
BcnI	CCSGG	1 cut(s)	176
BcoDI	GTCTC	2 cut(s)	47, 204
BfmI	CTRYAG	3 cut(s)	97, 1516, 1939
BfoI	RGCGCY	1 cut(s)	1486
BfrI	CTTAAG	1 cut(s)	1052
BfuI	GTATCC	1 cut(s)	2031
BisI	GCNGC	6 cut(s)	936, 1031, 1058, 1421, 2058, 2066
BlsI	GCNGC	6 cut(s)	937, 1032, 1059, 1422, 2059, 2067
Bme1390I	CCNGG	5 cut(s)	176, 405, 774, 1065, 1092
Bme18I	GGWCC	1 cut(s)	929
BmgT120I	GGNCC	1 cut(s)	929
BmiI	GGNNCC	1 cut(s)	369
BmrFI	CCNGG	5 cut(s)	176, 405, 774, 1065, 1092
BmrI	ACTGGG	1 cut(s)	1097
BmsI	GCATC	4 cut(s)	248, 751, 790, 1434
BmuI	ACTGGG	1 cut(s)	1097
BpiI	GAAGAC	1 cut(s)	1746
BpmI	CTGGAG	1 cut(s)	177
BpuEI	CTTGAG	1 cut(s)	1469
BpuMI	CCSGG	1 cut(s)	176
BsaAI	YACGTR	1 cut(s)	148
BsaBI	GATNNNNATC	1 cut(s)	1394
BsaHI	GRCGYC	1 cut(s)	1983
BsaI	GGTCTC	1 cut(s)	204
BsaJI	CCNNGG	4 cut(s)	282, 1064, 1091, 1469
Bsc4I	CCNNNNNNNGG	2 cut(s)	332, 557
Bse1I	ACTGG	2 cut(s)	230, 1103
Bse3DI	GCAATG	2 cut(s)	18, 1032
Bse8I	GATNNNNATC	1 cut(s)	1394
BseBI	CCWGG	4 cut(s)	405, 774, 1065, 1092
BseDI	CCNNGG	4 cut(s)	282, 1064, 1091, 1469
BseGI	GGATG	8 cut(s)	432, 699, 970, 1003, 1210, 1214, 1324, 1654
BseJI	GATNNNNATC	1 cut(s)	1394
BseLI	CCNNNNNNNGG	2 cut(s)	332, 557
BseMI	GCAATG	2 cut(s)	18, 1032
BseMII	CTCAG	1 cut(s)	752
BseNI	ACTGG	2 cut(s)	230, 1103
BseRI	GAGGAG	1 cut(s)	1561
BseSI	GKGCMC	3 cut(s)	91, 121, 678
BseXI	GCAGC	4 cut(s)	922, 1044, 2069, 2077
BseYI	CCCAGC	2 cut(s)	1644, 2061
Bsh1236I	CGCG	2 cut(s)	1011, 1899
Bsh1285I	CGRYCG	1 cut(s)	1747
BshFI	GGCC	3 cut(s)	743, 1423, 1622
BshNI	GGYRCC	1 cut(s)	367
BsiEI	CGRYCG	1 cut(s)	1747
BsiHKAI	GWGCWC	2 cut(s)	91, 121
BsiSI	CCGG	1 cut(s)	175
BslFI	GGGAC	3 cut(s)	573, 1033, 1133
BslI	CCNNNNNNNGG	2 cut(s)	332, 557
BsmAI	GTCTC	2 cut(s)	47, 204
BsmFI	GGGAC	3 cut(s)	573, 1033, 1133
BsmI	GAATGC	1 cut(s)	28
BsnI	GGCC	3 cut(s)	743, 1423, 1622
Bso31I	GGTCTC	1 cut(s)	204
Bsp1286I	GDGCHC	3 cut(s)	91, 121, 678
Bsp143I	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
Bsp68I	TCGCGA	1 cut(s)	1011
BspACI	CCGC	5 cut(s)	214, 1030, 1420, 1435, 2080
BspANI	GGCC	3 cut(s)	743, 1423, 1622
BspCNI	CTCAG	1 cut(s)	751
BspFNI	CGCG	2 cut(s)	1011, 1899
BspHI	TCATGA	2 cut(s)	621, 1477
BspLI	GGNNCC	1 cut(s)	369
BspPI	GGATC	2 cut(s)	867, 1646
BspT107I	GGYRCC	1 cut(s)	367
BspTI	CTTAAG	1 cut(s)	1052
BspTNI	GGTCTC	1 cut(s)	204
BsrBI	CCGCTC	2 cut(s)	1420, 1435
BsrDI	GCAATG	2 cut(s)	18, 1032
BsrI	ACTGG	2 cut(s)	230, 1103
BssECI	CCNNGG	4 cut(s)	282, 1064, 1091, 1469
BssMI	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
BssNI	GRCGYC	1 cut(s)	1983
BssT1I	CCWWGG	1 cut(s)	282
Bst2UI	CCWGG	4 cut(s)	405, 774, 1065, 1092
Bst4CI	ACNGT	6 cut(s)	86, 101, 116, 665, 1342, 1576
Bst6I	CTCTTC	2 cut(s)	45, 863
BstACI	GRCGYC	1 cut(s)	1983
BstAFI	CTTAAG	1 cut(s)	1052
BstAPI	GCANNNNNTGC	1 cut(s)	278
BstBAI	YACGTR	1 cut(s)	148
BstC8I	GCNNGC	2 cut(s)	237, 766
BstDEI	CTNAG	4 cut(s)	363, 738, 1112, 1528
BstEII	GGTNACC	1 cut(s)	1576
BstF5I	GGATG	8 cut(s)	432, 699, 970, 1003, 1210, 1214, 1324, 1654
BstFNI	CGCG	2 cut(s)	1011, 1899
BstH2I	RGCGCY	1 cut(s)	1486
BstHHI	GCGC	4 cut(s)	134, 717, 1485, 1899
BstKTI	GATC	8 cut(s)	699, 875, 889, 1015, 1398, 1654, 1747, 2010
BstMAI	GTCTC	2 cut(s)	47, 204
BstMBI	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
BstMCI	CGRYCG	1 cut(s)	1747
BstMWI	GCNNNNNNNGC	2 cut(s)	278, 1138
BstNI	CCWGG	4 cut(s)	405, 774, 1065, 1092
BstPI	GGTNACC	1 cut(s)	1576
BstSCI	CCNGG	5 cut(s)	174, 403, 772, 1063, 1090
BstSFI	CTRYAG	3 cut(s)	97, 1516, 1939
BstSLI	GKGCMC	3 cut(s)	91, 121, 678
BstUI	CGCG	2 cut(s)	1011, 1899
BstV1I	GCAGC	4 cut(s)	922, 1044, 2069, 2077
BstV2I	GAAGAC	1 cut(s)	1746
BstX2I	RGATCY	1 cut(s)	872
BstYI	RGATCY	1 cut(s)	872
BsuI	GTATCC	1 cut(s)	2031
BsuRI	GGCC	3 cut(s)	743, 1423, 1622
BtsCI	GGATG	8 cut(s)	432, 699, 970, 1003, 1210, 1214, 1324, 1654
BtsIMutI	CAGTG	4 cut(s)	91, 121, 237, 661
BtuMI	TCGCGA	1 cut(s)	1011
Cac8I	GCNNGC	2 cut(s)	237, 766
CaiI	CAGNNNCTG	1 cut(s)	236
CciI	TCATGA	2 cut(s)	621, 1477
CfoI	GCGC	4 cut(s)	134, 717, 1485, 1899
Cfr13I	GGNCC	1 cut(s)	929
CseI	GACGC	1 cut(s)	1888
Csp6I	GTAC	6 cut(s)	102, 572, 666, 808, 1247, 1668
CviAII	CATG	9 cut(s)	352, 622, 671, 1161, 1403, 1478, 1616, 1673, 1772
CviQI	GTAC	6 cut(s)	102, 572, 666, 808, 1247, 1668
DdeI	CTNAG	4 cut(s)	363, 738, 1112, 1528
DpnI	GATC	8 cut(s)	698, 874, 888, 1014, 1397, 1653, 1746, 2009
DpnII	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
DraI	TTTAAA	2 cut(s)	424, 1813
EaeI	YGGCCR	1 cut(s)	1421
Eam1104I	CTCTTC	2 cut(s)	45, 863
EarI	CTCTTC	2 cut(s)	45, 863
Eco130I	CCWWGG	1 cut(s)	282
Eco31I	GGTCTC	1 cut(s)	204
Eco32I	GATATC	1 cut(s)	988
Eco47I	GGWCC	1 cut(s)	929
Eco57I	CTGAAG	1 cut(s)	60
Eco91I	GGTNACC	1 cut(s)	1576
EcoO65I	GGTNACC	1 cut(s)	1576
EcoRI	GAATTC	1 cut(s)	1595
EcoRII	CCWGG	4 cut(s)	403, 772, 1063, 1090
EcoRV	GATATC	1 cut(s)	988
EcoT14I	CCWWGG	1 cut(s)	282
EcoT22I	ATGCAT	1 cut(s)	805
ErhI	CCWWGG	1 cut(s)	282
FaeI	CATG	9 cut(s)	355, 625, 674, 1164, 1406, 1481, 1619, 1676, 1775
FalI	AAGNNNNNCTT	2 cut(s)	289, 321
FaqI	GGGAC	3 cut(s)	573, 1033, 1133
FatI	CATG	9 cut(s)	351, 621, 670, 1160, 1402, 1477, 1615, 1672, 1771
FauNDI	CATATG	2 cut(s)	256, 1657
FbaI	TGATCA	1 cut(s)	696
FblI	GTMKAC	1 cut(s)	288
Fnu4HI	GCNGC	6 cut(s)	936, 1031, 1058, 1421, 2058, 2066
FokI	GGATG	8 cut(s)	419, 686, 977, 1010, 1217, 1221, 1331, 1661
Fsp4HI	GCNGC	6 cut(s)	936, 1031, 1058, 1421, 2058, 2066
FspAI	RTGCGCAY	1 cut(s)	716
FspI	TGCGCA	1 cut(s)	716
GlaI	GCGC	4 cut(s)	133, 716, 1484, 1898
GluI	GCNGC	6 cut(s)	936, 1031, 1058, 1421, 2058, 2066
GsaI	CCCAGC	2 cut(s)	1648, 2065
GsuI	CTGGAG	1 cut(s)	177
HaeII	RGCGCY	1 cut(s)	1486
HaeIII	GGCC	3 cut(s)	743, 1423, 1622
HapII	CCGG	1 cut(s)	175
HgaI	GACGC	1 cut(s)	1888
HhaI	GCGC	4 cut(s)	134, 717, 1485, 1899
Hin1I	GRCGYC	1 cut(s)	1983
Hin1II	CATG	9 cut(s)	355, 625, 674, 1164, 1406, 1481, 1619, 1676, 1775
Hin6I	GCGC	4 cut(s)	132, 715, 1483, 1897
HinP1I	GCGC	4 cut(s)	132, 715, 1483, 1897
HincII	GTYRAC	1 cut(s)	289
HindII	GTYRAC	1 cut(s)	289
HindIII	AAGCTT	1 cut(s)	1607
HpaII	CCGG	1 cut(s)	175
HphI	GGTGA	6 cut(s)	21, 484, 908, 1292, 1555, 1748
Hpy166II	GTNNAC	7 cut(s)	89, 104, 119, 289, 661, 1300, 1670
Hpy188I	TCNGA	3 cut(s)	880, 1473, 1825
Hpy8I	GTNNAC	7 cut(s)	89, 104, 119, 289, 661, 1300, 1670
Hpy99I	CGWCG	1 cut(s)	917
HpyAV	CCTTC	8 cut(s)	315, 369, 594, 951, 1546, 1585, 1670, 1787
HpyCH4III	ACNGT	6 cut(s)	86, 101, 116, 665, 1342, 1576
HpyCH4IV	ACGT	5 cut(s)	147, 193, 1144, 1310, 1983
HpyF10VI	GCNNNNNNNGC	2 cut(s)	278, 1138
HpyF3I	CTNAG	4 cut(s)	363, 738, 1112, 1528
HpySE526I	ACGT	5 cut(s)	147, 193, 1144, 1310, 1983
Hsp92I	GRCGYC	1 cut(s)	1983
Hsp92II	CATG	9 cut(s)	355, 625, 674, 1164, 1406, 1481, 1619, 1676, 1775
HspAI	GCGC	4 cut(s)	132, 715, 1483, 1897
Ksp22I	TGATCA	1 cut(s)	696
Kzo9I	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
LmnI	GCTCC	3 cut(s)	178, 943, 1835
Lsp1109I	GCAGC	4 cut(s)	922, 1044, 2069, 2077
LweI	GCATC	4 cut(s)	248, 751, 790, 1434
MaeII	ACGT	5 cut(s)	147, 193, 1144, 1310, 1983
MaeIII	GTNAC	3 cut(s)	497, 733, 1576
MalI	GATC	8 cut(s)	698, 874, 888, 1014, 1397, 1653, 1746, 2009
MbiI	CCGCTC	2 cut(s)	1420, 1435
MboI	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
MflI	RGATCY	1 cut(s)	872
MhlI	GDGCHC	3 cut(s)	91, 121, 678
MluCI	AATT	9 cut(s)	275, 342, 617, 726, 881, 1085, 1234, 1332, 1595
MmeI	TCCRAC	2 cut(s)	297, 1971
Mph1103I	ATGCAT	1 cut(s)	805
MroXI	GAANNNNTTC	3 cut(s)	1595, 1599, 1680
MseI	TTAA	8 cut(s)	423, 534, 543, 891, 1053, 1193, 1233, 1812
MslI	CAYNNNNRTG	1 cut(s)	1275
MspA1I	CMGCKG	2 cut(s)	935, 1289
MspCI	CTTAAG	1 cut(s)	1052
MspI	CCGG	1 cut(s)	175
MspR9I	CCNGG	5 cut(s)	176, 405, 774, 1065, 1092
Mva1269I	GAATGC	1 cut(s)	28
MvaI	CCWGG	4 cut(s)	405, 774, 1065, 1092
MvnI	CGCG	2 cut(s)	1011, 1899
MwoI	GCNNNNNNNGC	2 cut(s)	278, 1138
NciI	CCSGG	1 cut(s)	176
NdeI	CATATG	2 cut(s)	256, 1657
NdeII	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
NlaIII	CATG	9 cut(s)	355, 625, 674, 1164, 1406, 1481, 1619, 1676, 1775
NlaIV	GGNNCC	1 cut(s)	369
NmuCI	GTSAC	1 cut(s)	733
NruI	TCGCGA	1 cut(s)	1011
NsbI	TGCGCA	1 cut(s)	716
NsiI	ATGCAT	1 cut(s)	805
PagI	TCATGA	2 cut(s)	621, 1477
PcsI	WCGNNNNNNNCGW	1 cut(s)	178
PctI	GAATGC	1 cut(s)	28
PdmI	GAANNNNTTC	3 cut(s)	1595, 1599, 1680
PflMI	CCANNNNNTGG	1 cut(s)	332
PkrI	GCNGC	6 cut(s)	937, 1032, 1059, 1422, 2059, 2067
Ple19I	CGATCG	1 cut(s)	1747
Ppu21I	YACGTR	1 cut(s)	148
Psp1406I	AACGTT	1 cut(s)	1144
Psp6I	CCWGG	4 cut(s)	403, 772, 1063, 1090
PspEI	GGTNACC	1 cut(s)	1576
PspFI	CCCAGC	2 cut(s)	1644, 2061
PspGI	CCWGG	4 cut(s)	403, 772, 1063, 1090
PspN4I	GGNNCC	1 cut(s)	369
PspPI	GGNCC	1 cut(s)	929
PstNI	CAGNNNCTG	1 cut(s)	236
PsuI	RGATCY	1 cut(s)	872
PvuI	CGATCG	1 cut(s)	1747
PvuII	CAGCTG	2 cut(s)	935, 1289
RruI	TCGCGA	1 cut(s)	1011
RsaI	GTAC	6 cut(s)	103, 573, 667, 809, 1248, 1669
RsaNI	GTAC	6 cut(s)	102, 572, 666, 808, 1247, 1668
RseI	CAYNNNNRTG	1 cut(s)	1275
SalI	GTCGAC	1 cut(s)	287
SaqAI	TTAA	8 cut(s)	423, 534, 543, 891, 1053, 1193, 1233, 1812
SatI	GCNGC	6 cut(s)	936, 1031, 1058, 1421, 2058, 2066
Sau3AI	GATC	8 cut(s)	696, 872, 886, 1012, 1395, 1651, 1744, 2007
Sau96I	GGNCC	1 cut(s)	929
ScrFI	CCNGG	5 cut(s)	176, 405, 774, 1065, 1092
SduI	GDGCHC	3 cut(s)	91, 121, 678
SfaNI	GCATC	4 cut(s)	248, 751, 790, 1434
SfcI	CTRYAG	3 cut(s)	97, 1516, 1939
SinI	GGWCC	1 cut(s)	929
SmiMI	CAYNNNNRTG	1 cut(s)	1275
SmlI	CTYRAG	2 cut(s)	1052, 1448
SmoI	CTYRAG	2 cut(s)	1052, 1448
Sse9I	AATT	9 cut(s)	275, 342, 617, 726, 881, 1085, 1234, 1332, 1595
SsiI	CCGC	5 cut(s)	214, 1030, 1420, 1435, 2080
SspI	AATATT	1 cut(s)	1972
StyD4I	CCNGG	5 cut(s)	174, 403, 772, 1063, 1090
StyI	CCWWGG	1 cut(s)	282
TaaI	ACNGT	6 cut(s)	86, 101, 116, 665, 1342, 1576
TaiI	ACGT	5 cut(s)	150, 196, 1147, 1313, 1986
TaqI	TCGA	3 cut(s)	288, 1747, 1908
TaqII	GACCGA	1 cut(s)	721
TasI	AATT	9 cut(s)	275, 342, 617, 726, 881, 1085, 1234, 1332, 1595
TatI	WGTACW	3 cut(s)	101, 665, 807
TauI	GCSGC	2 cut(s)	1033, 1423
Tru1I	TTAA	8 cut(s)	423, 534, 543, 891, 1053, 1193, 1233, 1812
Tru9I	TTAA	8 cut(s)	423, 534, 543, 891, 1053, 1193, 1233, 1812
TscAI	CASTG	4 cut(s)	91, 121, 237, 668
TseFI	GTSAC	1 cut(s)	733
TseI	GCWGC	4 cut(s)	935, 1057, 2057, 2065
Tsp45I	GTSAC	1 cut(s)	733
TspDTI	ATGAA	8 cut(s)	63, 273, 610, 1014, 1588, 1689, 1721, 1967
TspGWI	ACGGA	4 cut(s)	540, 577, 977, 2056
TspRI	CASTG	4 cut(s)	91, 121, 237, 668
Van91I	CCANNNNNTGG	1 cut(s)	332
Vha464I	CTTAAG	1 cut(s)	1052
VneI	GTGCAC	2 cut(s)	87, 117
VpaK11BI	GGWCC	1 cut(s)	929
XapI	RAATTY	4 cut(s)	275, 342, 881, 1595
XcmI	CCANNNNNNNNNTGG	1 cut(s)	668
XmiI	GTMKAC	1 cut(s)	288
XmnI	GAANNNNTTC	3 cut(s)	1595, 1599, 1680
ZraI	GACGTC	1 cut(s)	1984
Zsp2I	ATGCAT	1 cut(s)	805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.