Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000778.1

Orthogroup ID

OG0009245

Physical Location & Seq

Genomic Coordinates Reverse (-)

8228 .. 17088

Gene Structure 8861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3267 bp

atggaagtgggaaggttaccgctctcagcatcacaaagaggcaagctcatatcagcgggctatactactctagcttcgctctcatccatctctccctccgacctcgctcgagatttacaagttccagagagtgaagctttcgaaatgctcaaggttgcaaaacttggttgtgggttggaacagccagataaacatacggctattgtcaatggtgcacaaactgcttgggatatcctcaatgaggagaggttgttaccacgcattactacatcttgtgccgatctagacaaaattctcggtgggggaattaattgtaaagaagttactgaaattggtggagttccaggcattggtaaaacacagcttgggattcaacttgcagtgaatgtgcaaattcctgttgattgtggtggcctaggtggaaaagcagtatatattgatactgagggcagctttatggtggagcgggctcttcaaattgctgaagcttctgtagtaaactggtcatcttatagtgaacttttgcggaaggaatcccaagcttgccgagttgaaatacagcctactgatatcctggaaaagatatattattttcgcatttgcacttccacagagcaaatttccctgataaattacttagaccaattcatctcggagcataaagatgttaagattgttatcattgatagtgttacttttcactttcgccaagattttgaggactttgctctcaggaatcgattacttggtggaatggccttaaagttgatgaaccttggaaaaaagtacaatctggcggttgtcatattcaatcatgtaaccactaagtgtacagaaggttcattccaattgagtctagcattggacgagaagctcaatgcccctcctcttctatccgataaaatcaaagaaacacaccccctcaaactcccaaacggtctcgtctctccttcactttccttcttcttcttctctgagagtcttgagacccagaggccacagtctcacaagcccattatgacttcctcttcctccgtcactctctcccaggccctcctggcccgggccatttcccaccacggctccaactccacctccgaccgcgtctccctctcctccgccctctccctccccaccttctccggcctcaaatccacctcatcgtcggcgacttctgcttcatccaaggccccccgtgtcgccaggcgccggttgggcgccgccaggccggtccgggctgctgccgtggagactctcgacaagactaccgagacctcgctggtggagaagtctgtgaacacgatccggttcttggcgattgatgctgtcgagaaggctaactccggtcaccccggtctgcccatgggttgtgctccgatgggtcatattttgtatgacgagatcatgaggtataaccccaagaacccttactggttcaaccgtgacaggttcgtgttgtctgctggacacgggtgtatgttgcagtacgctctgcttcaccttgctggatacgacagtgtcaaggaagaggacttgaagagcttcaggcaatggggaagcaggaccccaggacatcccgagaactttgagacacctggtgttgaagtcaccaccggtcctttggggcaaggtattgcaaatgctgttggtctggcccttgctgagaagcacttggctgcacgttacaacaagccagacagtgagattgttgaccactacacatattgtatattgggtgatggttgtcagatggagggtatttctaatgaagctgcttcccttgctgggcattggggacttggaaagctgatagccttctatgatgacaatcacatttccattgatggagacactgagattgcattcactgagagtgttgatacccgttttgagggtctcgggtggcacattatctgggtgaagaatggaaataccgggtatgatgagattagagctgccattaaggaagcaaaggctgtgacagacaagcccactttgataaaggtgacaacaaccattggttttggatctccaaacaaggcaaactcatacagtgtccatggtgctgcactgggtgccaaggaagttgatgctaccagacagaaccttggatggccttatgagcctttccacgtgccagaggatgttaaaagtcactggagtcgccatactgcagaaggttcagcccttgaagctgaatggaatgccaagtttgctgaatatgagaagaagtatgcagaggaagctgcagagctgaagtccatcatcactggtgagctaccggctggttgggaaaaggctctcccgacttacactccagaagtcccagctgatgctaccaggaatttatctcaggcaaacctcaatgcccttgcaaaagttcttcccggtcttgttggtggcagtgcagatcttgcttcttccaacatgactttgatgaaaatgtttggagatttccagaagggtaccccagaagaacgcaatattaggtttggtgttagggagcatgggatgggagccatctgcaacggaattgctcttcacagccccggatttattccctactgtgccactttctttgttttcactgactacatgagagctgccataaggatctctgcattggcagaagctcgagttatctatgttatgacccacgattcaattggacttggagaagatggaccaacccatcaaccaatagagcacttggcaagtttccgggcaatgcctaacattttgatgctccgcccagctgatgggaatgagactgccgggtcatacaaggttgcagttgataacaagaagagaccatctatccttgccctctctaggcaaaagctgccaaaccttgctggaacttccattgagggagtcgagaagggtggctacattgtatcagacaactctacaggtaacaagcccgatgttattttgattggtactggttctgagttggaaattgcctacaaagctggtgaggaactcagaaaggaagggaaggctgtcagagtggtctccttcgtttcttgggaactctttgacgaacaatcagatgcctacaaggaaagtgttttgcccacggcagtaactgccagggttagcattgaggctggatccacatttgggtgggagaagattattggaagcaaaggaaaggcaattggaatcgaccgttttggagcaagtgcaccagccccaacaatatacaaggagtatggccttactgtcgaggccgttgttgcagcagcaaaagaagttagctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004802 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016740 GO:0016744 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00030 ko00710 ko01051 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00710 map01051 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C Transketolase_N

Protein Analysis

1088

Amino Acids

117.96

Weight (kDa)

5.94

Isoelectric Point (pI)

35.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad51	PF08423	87 - 278	3.1e-30	Rad51
ATPase	PF06745	90 - 248	2.2e-07	KaiC
Transketolase_N	PF00456	430 - 761	5.8e-153	Transketolase, thiamine diphosphate binding domain
Transket_pyr	PF02779	779 - 949	4.3e-53	Transketolase, pyrimidine binding domain
Transketolase_C_1	PF22613	962 - 1076	1.7e-40	Transketolase-like TK C-terminal domain
Transketolase_C	PF02780	974 - 1080	1.7e-10	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45290 AT2G45290 AT3G60750 AT3G60750
fragaria_vesca	FvH4_7g11510 FvH4_7g11510 FvH4_7g11510 FvH4_7g11510
malus_domestica	MD02G1207200.v1.1 MD07G1119500.v1.1
prunus_persica	Prupe.2G143600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0349951
rosa_laevigata	RLG00000028513
rosa_multiflora	Rmu_co8514097.1_g000001 Rmu_sc0000778.1_g000002 Rmu_sc0005220.1_g000014
rosa_roxburghii	Rroxscaffold_4G00305250
rosa_rugosa	Rorug01G0207300
rosa_samantha	Rh1BG191100 Rh1CG208600 Rh1DG219700
rosa_wichuraiana	Rw0G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2776
Acc65I	GGTACC	1 cut(s)	2465
AccB1I	GGYRCC	4 cut(s)	1206, 1217, 2075, 2465
AccB7I	CCANNNNNTGG	2 cut(s)	350, 2759
AccBSI	CCGCTC	2 cut(s)	22, 466
AccII	CGCG	1 cut(s)	1104
AciI	CCGC	9 cut(s)	20, 56, 466, 526, 797, 1102, 1119, 1221, 2749
AclWI	GGATC	5 cut(s)	1297, 2035, 2621, 3111, 3124
AcsI	RAATTY	4 cut(s)	291, 393, 618, 2344
AcuI	CTGAAG	3 cut(s)	504, 1528, 2276
AcvI	CACGTG	1 cut(s)	2134
AcyI	GRCGYC	2 cut(s)	1207, 1218
AdeI	CACNNNGTG	3 cut(s)	828, 1598, 2075
AfaI	GTAC	5 cut(s)	788, 832, 1487, 2467, 2944
AgeI	ACCGGT	1 cut(s)	1613
AgsI	TTSAA	9 cut(s)	374, 476, 554, 811, 1438, 1537, 1604, 2192, 2664
Alw21I	GWGCWC	4 cut(s)	217, 1375, 2709, 3193
Alw44I	GTGCAC	2 cut(s)	213, 3189
AlwI	GGATC	5 cut(s)	1297, 2035, 2621, 3111, 3124
AlwNI	CAGNNNCTG	1 cut(s)	3092
Ama87I	CYCGRG	5 cut(s)	108, 1062, 1577, 1898, 2634
ApaLI	GTGCAC	2 cut(s)	213, 3189
ApoI	RAATTY	4 cut(s)	291, 393, 618, 2344
AseI	ATTAAT	1 cut(s)	309
AsiGI	ACCGGT	1 cut(s)	1613
Asp700I	GAANNNNTTC	1 cut(s)	1541
Asp718I	GGTACC	1 cut(s)	2465
AspA2I	CCTAGG	1 cut(s)	415
AspLEI	GCGC	2 cut(s)	1209, 1220
AspS9I	GGNCC	9 cut(s)	1051, 1060, 1065, 1189, 1231, 1563, 1616, 1654, 2684
AsuC2I	CCSGG	9 cut(s)	1063, 1064, 1235, 1353, 1936, 2388, 2550, 2723, 2776
AsuHPI	GGTGA	8 cut(s)	1340, 1490, 1600, 1748, 1930, 2017, 2285, 2990
AsuII	TTCGAA	1 cut(s)	141
AvaI	CYCGRG	5 cut(s)	108, 1062, 1577, 1898, 2634
AvaII	GGWCC	4 cut(s)	1231, 1563, 1616, 2684
AvrII	CCTAGG	1 cut(s)	415
BaeGI	GKGCMC	2 cut(s)	217, 3193
BaeI	ACNNNNGTAYC	2 cut(s)	1501, 1534
BamHI	GGATCC	1 cut(s)	3116
BanI	GGYRCC	4 cut(s)	1206, 1217, 2075, 2465
BanII	GRGCYC	1 cut(s)	472
BarI	GAAGNNNNNNTAC	2 cut(s)	2873, 2905
BbrPI	CACGTG	1 cut(s)	2134
Bbv12I	GWGCWC	4 cut(s)	217, 1375, 2709, 3193
BceAI	ACGGC	5 cut(s)	213, 1096, 1229, 3099, 3221
BciVI	GTATCC	1 cut(s)	1502
BcnI	CCSGG	9 cut(s)	1063, 1064, 1235, 1353, 1936, 2388, 2550, 2723, 2776
BfaI	CTAG	6 cut(s)	71, 284, 416, 857, 2832, 3265
BfmI	CTRYAG	4 cut(s)	492, 2172, 2247, 2910
BfoI	RGCGCY	2 cut(s)	1210, 1221
BfuI	GTATCC	1 cut(s)	1502
BglI	GCCNNNNNGGC	2 cut(s)	1058, 1215
BglII	AGATCT	1 cut(s)	2410
BlnI	CCTAGG	1 cut(s)	415
Bme18I	GGWCC	4 cut(s)	1231, 1563, 1616, 2684
BmeT110I	CYCGRG	5 cut(s)	108, 1062, 1577, 1898, 2634
BmgT120I	GGNCC	9 cut(s)	1051, 1060, 1065, 1189, 1231, 1563, 1616, 1654, 2684
BmiI	GGNNCC	9 cut(s)	1084, 1191, 1208, 1219, 1565, 2077, 2467, 2518, 3118
BmrI	ACTGGG	1 cut(s)	2081
BmsI	GCATC	6 cut(s)	38, 1312, 2080, 2323, 2733, 3046
BmuI	ACTGGG	1 cut(s)	2081
BplI	GAGNNNNNCTC	2 cut(s)	30, 62
BpmI	CTGGAG	2 cut(s)	2179, 2301
Bpu14I	TTCGAA	1 cut(s)	141
BpuEI	CTTGAG	2 cut(s)	134, 1004
BpuMI	CCSGG	9 cut(s)	1063, 1064, 1235, 1353, 1936, 2388, 2550, 2723, 2776
Bsa29I	ATCGAT	1 cut(s)	739
BsaAI	YACGTR	1 cut(s)	2134
BsaBI	GATNNNNATC	2 cut(s)	677, 1827
BsaHI	GRCGYC	2 cut(s)	1207, 1218
BsaI	GGTCTC	6 cut(s)	944, 980, 1265, 1901, 2803, 3022
BsaWI	WCCGGW	3 cut(s)	1305, 1343, 1613
Bse118I	RCCGGY	4 cut(s)	1209, 1228, 1613, 2281
Bse1I	ACTGG	6 cut(s)	506, 1436, 2076, 2162, 2275, 2950
Bse3DI	GCAATG	2 cut(s)	1556, 2733
Bse8I	GATNNNNATC	2 cut(s)	677, 1827
BseCI	ATCGAT	1 cut(s)	739
BseGI	GGATG	6 cut(s)	83, 1181, 1573, 2117, 2149, 2517
BseJI	GATNNNNATC	2 cut(s)	677, 1827
BseMI	GCAATG	2 cut(s)	1556, 2733
BseNI	ACTGG	6 cut(s)	506, 1436, 2076, 2162, 2275, 2950
BseRI	GAGGAG	3 cut(s)	257, 876, 1105
BseSI	GKGCMC	2 cut(s)	217, 3193
BseYI	CCCAGC	3 cut(s)	1784, 2326, 2752
BsgI	GTGCAG	3 cut(s)	1662, 2052, 2427
Bsh1236I	CGCG	1 cut(s)	1104
Bsh1285I	CGRYCG	2 cut(s)	1102, 3175
BshNI	GGYRCC	4 cut(s)	1206, 1217, 2075, 2465
BshTI	ACCGGT	1 cut(s)	1613
BshVI	ATCGAT	1 cut(s)	739
BsiEI	CGRYCG	2 cut(s)	1102, 3175
BsiHKAI	GWGCWC	4 cut(s)	217, 1375, 2709, 3193
BsiHKCI	CYCGRG	5 cut(s)	108, 1062, 1577, 1898, 2634
BslFI	GGGAC	2 cut(s)	1809, 2309
BsmBI	CGTCTC	2 cut(s)	949, 1111
BsmFI	GGGAC	2 cut(s)	1809, 2309
BsmI	GAATGC	2 cut(s)	1862, 2209
Bso31I	GGTCTC	6 cut(s)	944, 980, 1265, 1901, 2803, 3022
BsoBI	CYCGRG	5 cut(s)	108, 1062, 1577, 1898, 2634
Bsp119I	TTCGAA	1 cut(s)	141
Bsp1286I	GDGCHC	5 cut(s)	217, 472, 1375, 2709, 3193
Bsp1407I	TGTACA	1 cut(s)	830
Bsp143I	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
Bsp19I	CCATGG	2 cut(s)	1362, 2059
BspACI	CCGC	9 cut(s)	20, 56, 466, 526, 797, 1102, 1119, 1221, 2749
BspDI	ATCGAT	1 cut(s)	739
BspFNI	CGCG	1 cut(s)	1104
BspHI	TCATGA	1 cut(s)	1404
BspLI	GGNNCC	9 cut(s)	1084, 1191, 1208, 1219, 1565, 2077, 2467, 2518, 3118
BspMAI	CTGCAG	2 cut(s)	2176, 2251
BspPI	GGATC	5 cut(s)	1297, 2035, 2621, 3111, 3124
BspQI	GCTCTTC	3 cut(s)	477, 1532, 2544
BspT104I	TTCGAA	1 cut(s)	141
BspT107I	GGYRCC	4 cut(s)	1206, 1217, 2075, 2465
BspTNI	GGTCTC	6 cut(s)	944, 980, 1265, 1901, 2803, 3022
BsrBI	CCGCTC	2 cut(s)	22, 466
BsrDI	GCAATG	2 cut(s)	1556, 2733
BsrFI	RCCGGY	4 cut(s)	1209, 1228, 1613, 2281
BsrGI	TGTACA	1 cut(s)	830
BsrI	ACTGG	6 cut(s)	506, 1436, 2076, 2162, 2275, 2950
BssAI	RCCGGY	4 cut(s)	1209, 1228, 1613, 2281
BssMI	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
BssNI	GRCGYC	2 cut(s)	1207, 1218
BssT1I	CCWWGG	7 cut(s)	415, 775, 1185, 1362, 2059, 2079, 2107
Bst4CI	ACNGT	9 cut(s)	938, 1002, 1442, 1517, 1700, 2054, 2567, 3176, 3229
Bst6I	CTCTTC	7 cut(s)	477, 894, 1033, 1521, 1532, 2544, 2801
BstACI	GRCGYC	2 cut(s)	1207, 1218
BstAPI	GCANNNNNTGC	5 cut(s)	221, 2075, 2414, 2842, 3092
BstAUI	TGTACA	1 cut(s)	830
BstBAI	YACGTR	1 cut(s)	2134
BstBI	TTCGAA	1 cut(s)	141
BstC8I	GCNNGC	4 cut(s)	44, 58, 468, 544
BstDSI	CCRYGG	5 cut(s)	1078, 1245, 1362, 2059, 3081
BstEII	GGTNACC	2 cut(s)	15, 1346
BstENI	CCTNNNNNAGG	1 cut(s)	239
BstF5I	GGATG	6 cut(s)	83, 1181, 1573, 2117, 2149, 2517
BstFNI	CGCG	1 cut(s)	1104
BstH2I	RGCGCY	2 cut(s)	1210, 1221
BstHHI	GCGC	2 cut(s)	1209, 1220
BstKTI	GATC	7 cut(s)	283, 1305, 1404, 2030, 2413, 2616, 3119
BstMBI	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
BstMCI	CGRYCG	2 cut(s)	1102, 3175
BstPI	GGTNACC	2 cut(s)	15, 1346
BstSFI	CTRYAG	4 cut(s)	492, 2172, 2247, 2910
BstSLI	GKGCMC	2 cut(s)	217, 3193
BstUI	CGCG	1 cut(s)	1104
BstX2I	RGATCY	4 cut(s)	2027, 2410, 2613, 3116
BstYI	RGATCY	4 cut(s)	2027, 2410, 2613, 3116
Bsu15I	ATCGAT	1 cut(s)	739
BsuI	GTATCC	1 cut(s)	1502
BsuTUI	ATCGAT	1 cut(s)	739
BtgI	CCRYGG	5 cut(s)	1078, 1245, 1362, 2059, 3081
BtsCI	GGATG	6 cut(s)	83, 1181, 1573, 2117, 2149, 2517
BtsI	GCAGTG	2 cut(s)	387, 2410
Cac8I	GCNNGC	4 cut(s)	44, 58, 468, 544
CaiI	CAGNNNCTG	1 cut(s)	3092
CciI	TCATGA	1 cut(s)	1404
CfoI	GCGC	2 cut(s)	1209, 1220
Cfr10I	RCCGGY	4 cut(s)	1209, 1228, 1613, 2281
Cfr13I	GGNCC	9 cut(s)	1051, 1060, 1065, 1189, 1231, 1563, 1616, 1654, 2684
Cfr9I	CCCGGG	1 cut(s)	1062
ClaI	ATCGAT	1 cut(s)	739
CpoI	CGGWCCG	1 cut(s)	1231
CseI	GACGC	1 cut(s)	1093
CsiI	ACCWGGT	1 cut(s)	1594
Csp6I	GTAC	5 cut(s)	787, 831, 1486, 2466, 2943
CspAI	ACCGGT	1 cut(s)	1613
CspCI	CAANNNNNGTGG	2 cut(s)	2560, 2595
CspI	CGGWCCG	1 cut(s)	1231
CviAII	CATG	7 cut(s)	815, 1363, 1405, 2060, 2428, 2507, 2596
CviQI	GTAC	5 cut(s)	787, 831, 1486, 2466, 2943
DinI	GGCGCC	2 cut(s)	1208, 1219
DpnI	GATC	7 cut(s)	282, 1304, 1403, 2029, 2412, 2615, 3118
DpnII	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
DraIII	CACNNNGTG	3 cut(s)	828, 1598, 2075
DrdI	GACNNNNNNGTC	1 cut(s)	2776
DseDI	GACNNNNNNGTC	1 cut(s)	2776
Eam1104I	CTCTTC	7 cut(s)	477, 894, 1033, 1521, 1532, 2544, 2801
EarI	CTCTTC	7 cut(s)	477, 894, 1033, 1521, 1532, 2544, 2801
EciI	GGCGGA	2 cut(s)	1108, 2738
Eco130I	CCWWGG	7 cut(s)	415, 775, 1185, 1362, 2059, 2079, 2107
Eco24I	GRGCYC	1 cut(s)	472
Eco31I	GGTCTC	6 cut(s)	944, 980, 1265, 1901, 2803, 3022
Eco32I	GATATC	2 cut(s)	232, 571
Eco47I	GGWCC	4 cut(s)	1231, 1563, 1616, 2684
Eco57I	CTGAAG	3 cut(s)	504, 1528, 2276
Eco72I	CACGTG	1 cut(s)	2134
Eco88I	CYCGRG	5 cut(s)	108, 1062, 1577, 1898, 2634
Eco91I	GGTNACC	2 cut(s)	15, 1346
EcoNI	CCTNNNNNAGG	1 cut(s)	239
EcoO109I	RGGNCCY	3 cut(s)	1051, 1189, 1563
EcoO65I	GGTNACC	2 cut(s)	15, 1346
EcoRV	GATATC	2 cut(s)	232, 571
EcoT14I	CCWWGG	7 cut(s)	415, 775, 1185, 1362, 2059, 2079, 2107
EcoT38I	GRGCYC	1 cut(s)	472
EgeI	GGCGCC	2 cut(s)	1208, 1219
EheI	GGCGCC	2 cut(s)	1208, 1219
ErhI	CCWWGG	7 cut(s)	415, 775, 1185, 1362, 2059, 2079, 2107
Esp3I	CGTCTC	2 cut(s)	949, 1111
FaeI	CATG	7 cut(s)	818, 1366, 1408, 2063, 2431, 2510, 2599
FaqI	GGGAC	2 cut(s)	1809, 2309
FatI	CATG	7 cut(s)	814, 1362, 1404, 2059, 2427, 2506, 2595
FauI	CCCGC	2 cut(s)	49, 459
FokI	GGATG	6 cut(s)	70, 1168, 1560, 2124, 2156, 2524
FriOI	GRGCYC	1 cut(s)	472
FspBI	CTAG	6 cut(s)	71, 284, 416, 857, 2832, 3265
GlaI	GCGC	2 cut(s)	1208, 1219
GsaI	CCCAGC	3 cut(s)	1788, 2330, 2756
GsuI	CTGGAG	2 cut(s)	2179, 2301
HaeII	RGCGCY	2 cut(s)	1210, 1221
HgaI	GACGC	1 cut(s)	1093
HhaI	GCGC	2 cut(s)	1209, 1220
Hin1I	GRCGYC	2 cut(s)	1207, 1218
Hin1II	CATG	7 cut(s)	818, 1366, 1408, 2063, 2431, 2510, 2599
Hin6I	GCGC	2 cut(s)	1207, 1218
HinP1I	GCGC	2 cut(s)	1207, 1218
HincII	GTYRAC	1 cut(s)	1711
HindII	GTYRAC	1 cut(s)	1711
HindIII	AAGCTT	3 cut(s)	135, 486, 540
HphI	GGTGA	8 cut(s)	1340, 1490, 1600, 1748, 1930, 2017, 2285, 2990
Hpy166II	GTNNAC	7 cut(s)	215, 499, 518, 831, 1297, 1711, 3191
Hpy8I	GTNNAC	7 cut(s)	215, 499, 518, 831, 1297, 1711, 3191
Hpy99I	CGWCG	1 cut(s)	1168
HpyCH4III	ACNGT	9 cut(s)	938, 1002, 1442, 1517, 1700, 2054, 2567, 3176, 3229
HpyCH4IV	ACGT	2 cut(s)	1681, 2133
HpySE526I	ACGT	2 cut(s)	1681, 2133
Hsp92I	GRCGYC	2 cut(s)	1207, 1218
Hsp92II	CATG	7 cut(s)	818, 1366, 1408, 2063, 2431, 2510, 2599
HspAI	GCGC	2 cut(s)	1207, 1218
KasI	GGCGCC	2 cut(s)	1206, 1217
KpnI	GGTACC	1 cut(s)	2469
Kzo9I	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
LguI	GCTCTTC	3 cut(s)	477, 1532, 2544
LmnI	GCTCC	8 cut(s)	463, 655, 1088, 1378, 2503, 2516, 2751, 3182
LweI	GCATC	6 cut(s)	38, 1312, 2080, 2323, 2733, 3046
MabI	ACCWGGT	1 cut(s)	1594
MaeI	CTAG	6 cut(s)	71, 284, 416, 857, 2832, 3265
MaeII	ACGT	2 cut(s)	1681, 2133
MalI	GATC	7 cut(s)	282, 1304, 1403, 2029, 2412, 2615, 3118
MbiI	CCGCTC	2 cut(s)	22, 466
MboI	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
MfeI	CAATTG	3 cut(s)	848, 2664, 3162
MflI	RGATCY	4 cut(s)	2027, 2410, 2613, 3116
MhlI	GDGCHC	5 cut(s)	217, 472, 1375, 2709, 3193
Mly113I	GGCGCC	2 cut(s)	1207, 1218
MlyI	GAGTC	5 cut(s)	862, 988, 1246, 2170, 2883
MmeI	TCCRAC	6 cut(s)	123, 156, 1110, 1122, 2448, 2937
MroXI	GAANNNNTTC	1 cut(s)	1541
MseI	TTAA	5 cut(s)	309, 669, 761, 1962, 2148
MslI	CAYNNNNRTG	3 cut(s)	663, 2741, 3127
MspA1I	CMGCKG	3 cut(s)	56, 2330, 2756
MunI	CAATTG	3 cut(s)	848, 2664, 3162
Mva1269I	GAATGC	2 cut(s)	1862, 2209
MvnI	CGCG	1 cut(s)	1104
NarI	GGCGCC	2 cut(s)	1207, 1218
NciI	CCSGG	9 cut(s)	1063, 1064, 1235, 1353, 1936, 2388, 2550, 2723, 2776
NcoI	CCATGG	2 cut(s)	1362, 2059
NdeII	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
NlaIII	CATG	7 cut(s)	818, 1366, 1408, 2063, 2431, 2510, 2599
NlaIV	GGNNCC	9 cut(s)	1084, 1191, 1208, 1219, 1565, 2077, 2467, 2518, 3118
NmeAIII	GCCGAG	1 cut(s)	572
NmuCI	GTSAC	7 cut(s)	1036, 1346, 1442, 1606, 1978, 2005, 2153
NspV	TTCGAA	1 cut(s)	141
PaeR7I	CTCGAG	2 cut(s)	108, 2634
PagI	TCATGA	1 cut(s)	1404
PciSI	GCTCTTC	3 cut(s)	477, 1532, 2544
PctI	GAATGC	2 cut(s)	1862, 2209
PdmI	GAANNNNTTC	1 cut(s)	1541
PfeI	GAWTC	5 cut(s)	370, 533, 736, 2660, 3168
PflFI	GACNNNGTC	2 cut(s)	1103, 1517
PflMI	CCANNNNNTGG	2 cut(s)	350, 2759
PfoI	TCCNGGA	1 cut(s)	573
PinAI	ACCGGT	1 cut(s)	1613
PleI	GAGTC	5 cut(s)	861, 987, 1246, 2169, 2882
PluTI	GGCGCC	2 cut(s)	1210, 1221
PmaCI	CACGTG	1 cut(s)	2134
PmlI	CACGTG	1 cut(s)	2134
PpsI	GAGTC	5 cut(s)	861, 987, 1246, 2169, 2882
Ppu21I	YACGTR	1 cut(s)	2134
PpuMI	RGGWCCY	1 cut(s)	1563
PshBI	ATTAAT	1 cut(s)	309
Psp5II	RGGWCCY	1 cut(s)	1563
PspCI	CACGTG	1 cut(s)	2134
PspEI	GGTNACC	2 cut(s)	15, 1346
PspFI	CCCAGC	3 cut(s)	1784, 2326, 2752
PspN4I	GGNNCC	9 cut(s)	1084, 1191, 1208, 1219, 1565, 2077, 2467, 2518, 3118
PspPI	GGNCC	9 cut(s)	1051, 1060, 1065, 1189, 1231, 1563, 1616, 1654, 2684
PspPPI	RGGWCCY	1 cut(s)	1563
PspXI	VCTCGAGB	1 cut(s)	2634
PsrI	GAACNNNNNNTAC	2 cut(s)	823, 855
PstI	CTGCAG	2 cut(s)	2176, 2251
PstNI	CAGNNNCTG	1 cut(s)	3092
PsuI	RGATCY	4 cut(s)	2027, 2410, 2613, 3116
PsyI	GACNNNGTC	2 cut(s)	1103, 1517
PvuII	CAGCTG	2 cut(s)	2330, 2756
RsaI	GTAC	5 cut(s)	788, 832, 1487, 2467, 2944
RsaNI	GTAC	5 cut(s)	787, 831, 1486, 2466, 2943
RseI	CAYNNNNRTG	3 cut(s)	663, 2741, 3127
Rsr2I	CGGWCCG	1 cut(s)	1231
RsrII	CGGWCCG	1 cut(s)	1231
SapI	GCTCTTC	3 cut(s)	477, 1532, 2544
SaqAI	TTAA	5 cut(s)	309, 669, 761, 1962, 2148
Sau3AI	GATC	7 cut(s)	280, 1302, 1401, 2027, 2410, 2613, 3116
Sau96I	GGNCC	9 cut(s)	1051, 1060, 1065, 1189, 1231, 1563, 1616, 1654, 2684
SchI	GAGTC	5 cut(s)	862, 988, 1246, 2170, 2883
SduI	GDGCHC	5 cut(s)	217, 472, 1375, 2709, 3193
SexAI	ACCWGGT	1 cut(s)	1594
SfaNI	GCATC	6 cut(s)	38, 1312, 2080, 2323, 2733, 3046
SfcI	CTRYAG	4 cut(s)	492, 2172, 2247, 2910
SfiI	GGCCNNNNNGGCC	1 cut(s)	1058
SfoI	GGCGCC	2 cut(s)	1208, 1219
Sfr274I	CTCGAG	2 cut(s)	108, 2634
SfuI	TTCGAA	1 cut(s)	141
SinI	GGWCC	4 cut(s)	1231, 1563, 1616, 2684
SlaI	CTCGAG	2 cut(s)	108, 2634
SmaI	CCCGGG	1 cut(s)	1064
SmiMI	CAYNNNNRTG	3 cut(s)	663, 2741, 3127
SmlI	CTYRAG	4 cut(s)	108, 149, 983, 2634
SmoI	CTYRAG	4 cut(s)	108, 149, 983, 2634
SrfI	GCCCGGGC	1 cut(s)	1064
SsiI	CCGC	9 cut(s)	20, 56, 466, 526, 797, 1102, 1119, 1221, 2749
SspDI	GGCGCC	2 cut(s)	1206, 1217
SspI	AATATT	1 cut(s)	2485
SspMI	CTAG	6 cut(s)	71, 284, 416, 857, 2832, 3265
StyI	CCWWGG	7 cut(s)	415, 775, 1185, 1362, 2059, 2079, 2107
TaaI	ACNGT	9 cut(s)	938, 1002, 1442, 1517, 1700, 2054, 2567, 3176, 3229
TaiI	ACGT	2 cut(s)	1684, 2136
TaqI	TCGA	9 cut(s)	109, 141, 739, 1257, 1329, 2635, 2877, 3171, 3231
TatI	WGTACW	2 cut(s)	786, 830
TauI	GCSGC	1 cut(s)	1223
TfiI	GAWTC	5 cut(s)	370, 533, 736, 2660, 3168
Tru1I	TTAA	5 cut(s)	309, 669, 761, 1962, 2148
Tru9I	TTAA	5 cut(s)	309, 669, 761, 1962, 2148
TseFI	GTSAC	7 cut(s)	1036, 1346, 1442, 1606, 1978, 2005, 2153
Tsp45I	GTSAC	7 cut(s)	1036, 1346, 1442, 1606, 1978, 2005, 2153
TspDTI	ATGAA	6 cut(s)	637, 785, 831, 1170, 1782, 2453
TspGWI	ACGGA	2 cut(s)	1024, 2544
TspMI	CCCGGG	1 cut(s)	1062
Tth111I	GACNNNGTC	2 cut(s)	1103, 1517
Van91I	CCANNNNNTGG	2 cut(s)	350, 2759
VneI	GTGCAC	2 cut(s)	213, 3189
VpaK11BI	GGWCC	4 cut(s)	1231, 1563, 1616, 2684
VspI	ATTAAT	1 cut(s)	309
XagI	CCTNNNNNAGG	1 cut(s)	239
XapI	RAATTY	4 cut(s)	291, 393, 618, 2344
XbaI	TCTAGA	1 cut(s)	283
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1210, 1618, 2663
XhoI	CTCGAG	2 cut(s)	108, 2634
XmaI	CCCGGG	1 cut(s)	1062
XmaJI	CCTAGG	1 cut(s)	415
XmnI	GAANNNNTTC	1 cut(s)	1541
XspI	CTAG	6 cut(s)	71, 284, 416, 857, 2832, 3265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.