Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1229500.v1.1 |
| prunus_persica | Prupe.2G259700_v2.0.a1 |
| pyrus_communis | pycom07g20760 |
| rosa_laevigata | RLG00000026956 |
| rosa_multiflora | Rmu_sc0000809.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00285630 |
| rosa_rugosa | Rorug01G0364300 Rorug01G0364400 |
| rosa_samantha | Rh1AG374700 Rh1BG338100 Rh1CG351400 Rh1DG369100 |
| rosa_wichuraiana | Rw1G032960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2108 |
| AccB1I | GGYRCC | 1 cut(s) | 1810 |
| AccI | GTMKAC | 1 cut(s) | 797 |
| AccII | CGCG | 2 cut(s) | 1857, 2106 |
| AciI | CCGC | 4 cut(s) | 504, 1855, 2104, 2106 |
| AclWI | GGATC | 3 cut(s) | 1987, 2184, 2276 |
| AcsI | RAATTY | 5 cut(s) | 491, 976, 1145, 1167, 2162 |
| AdeI | CACNNNGTG | 1 cut(s) | 1037 |
| AfaI | GTAC | 6 cut(s) | 418, 929, 1092, 1269, 1428, 1544 |
| AfeI | AGCGCT | 1 cut(s) | 1528 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1492 |
| AflIII | ACRYGT | 2 cut(s) | 518, 621 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 223 |
| AjnI | CCWGG | 2 cut(s) | 695, 2122 |
| AleI | CACNNNNGTG | 1 cut(s) | 867 |
| Alw21I | GWGCWC | 1 cut(s) | 1520 |
| Alw26I | GTCTC | 3 cut(s) | 11, 697, 1775 |
| Alw44I | GTGCAC | 1 cut(s) | 1516 |
| AlwI | GGATC | 3 cut(s) | 1987, 2184, 2276 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 152 |
| Aor51HI | AGCGCT | 1 cut(s) | 1528 |
| AoxI | GGCC | 5 cut(s) | 280, 1480, 1852, 1861, 2006 |
| ApaLI | GTGCAC | 1 cut(s) | 1516 |
| ApeKI | GCWGC | 5 cut(s) | 1116, 1136, 1743, 1940, 1982 |
| ApoI | RAATTY | 5 cut(s) | 491, 976, 1145, 1167, 2162 |
| AspLEI | GCGC | 3 cut(s) | 1363, 1529, 1573 |
| AspS9I | GGNCC | 3 cut(s) | 280, 1861, 1951 |
| AsuC2I | CCSGG | 1 cut(s) | 2258 |
| AsuHPI | GGTGA | 3 cut(s) | 478, 848, 1336 |
| AsuII | TTCGAA | 1 cut(s) | 326 |
| AvaII | GGWCC | 1 cut(s) | 1951 |
| BaeGI | GKGCMC | 1 cut(s) | 1520 |
| BanI | GGYRCC | 1 cut(s) | 1810 |
| BanII | GRGCYC | 1 cut(s) | 1911 |
| Bbv12I | GWGCWC | 1 cut(s) | 1520 |
| BbvI | GCAGC | 5 cut(s) | 1123, 1128, 1755, 1952, 1994 |
| BccI | CCATC | 9 cut(s) | 106, 434, 457, 587, 833, 1782, 1783, 1813, 2066 |
| BceAI | ACGGC | 1 cut(s) | 1848 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 693, 727 |
| BciT130I | CCWGG | 2 cut(s) | 697, 2124 |
| BclI | TGATCA | 1 cut(s) | 751 |
| BcnI | CCSGG | 1 cut(s) | 2258 |
| BcoDI | GTCTC | 3 cut(s) | 11, 697, 1775 |
| BfaI | CTAG | 5 cut(s) | 530, 833, 894, 1422, 2291 |
| BfoI | RGCGCY | 1 cut(s) | 1530 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1860 |
| BisI | GCNGC | 6 cut(s) | 1117, 1137, 1744, 1855, 1941, 1983 |
| BlsI | GCNGC | 6 cut(s) | 1118, 1138, 1745, 1856, 1942, 1984 |
| Bme1390I | CCNGG | 3 cut(s) | 697, 2124, 2258 |
| Bme18I | GGWCC | 1 cut(s) | 1951 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 223 |
| BmgT120I | GGNCC | 3 cut(s) | 280, 1861, 1951 |
| BmiI | GGNNCC | 3 cut(s) | 1812, 1952, 2121 |
| BmrFI | CCNGG | 3 cut(s) | 697, 2124, 2258 |
| BmsI | GCATC | 8 cut(s) | 881, 943, 1225, 1348, 1651, 1864, 1887, 2080 |
| Bpu14I | TTCGAA | 1 cut(s) | 326 |
| BpuEI | CTTGAG | 1 cut(s) | 1478 |
| BpuMI | CCSGG | 1 cut(s) | 2258 |
| BsaAI | YACGTR | 1 cut(s) | 206 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2286 |
| BsaI | GGTCTC | 1 cut(s) | 1775 |
| BsaJI | CCNNGG | 4 cut(s) | 1004, 1477, 2104, 2244 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1492 |
| Bse3DI | GCAATG | 3 cut(s) | 711, 1431, 1884 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2286 |
| BseBI | CCWGG | 2 cut(s) | 697, 2124 |
| BseDI | CCNNGG | 4 cut(s) | 1004, 1477, 2104, 2244 |
| BseGI | GGATG | 9 cut(s) | 101, 666, 958, 1363, 1393, 1666, 1902, 2132, 2253 |
| BseJI | GATNNNNATC | 1 cut(s) | 2286 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1492 |
| BseMI | GCAATG | 3 cut(s) | 711, 1431, 1884 |
| BseMII | CTCAG | 8 cut(s) | 154, 366, 411, 775, 1338, 1557, 1977, 2031 |
| BseSI | GKGCMC | 1 cut(s) | 1520 |
| BseXI | GCAGC | 5 cut(s) | 1123, 1128, 1755, 1952, 1994 |
| BseYI | CCCAGC | 1 cut(s) | 165 |
| BsgI | GTGCAG | 2 cut(s) | 1099, 1762 |
| Bsh1236I | CGCG | 2 cut(s) | 1857, 2106 |
| BshFI | GGCC | 5 cut(s) | 282, 1482, 1854, 1863, 2008 |
| BshNI | GGYRCC | 1 cut(s) | 1810 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1520 |
| BsiSI | CCGG | 2 cut(s) | 2258, 2312 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1492 |
| BsmAI | GTCTC | 3 cut(s) | 11, 697, 1775 |
| BsmI | GAATGC | 3 cut(s) | 706, 1015, 2313 |
| BsnI | GGCC | 5 cut(s) | 282, 1482, 1854, 1863, 2008 |
| Bso31I | GGTCTC | 1 cut(s) | 1775 |
| Bsp119I | TTCGAA | 1 cut(s) | 326 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1520, 1911 |
| Bsp1407I | TGTACA | 2 cut(s) | 1090, 1267 |
| Bsp143I | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| Bsp19I | CCATGG | 2 cut(s) | 1004, 1477 |
| BspACI | CCGC | 4 cut(s) | 504, 1855, 2104, 2106 |
| BspANI | GGCC | 5 cut(s) | 282, 1482, 1854, 1863, 2008 |
| BspCNI | CTCAG | 8 cut(s) | 153, 367, 412, 774, 1339, 1558, 1978, 2030 |
| BspFNI | CGCG | 2 cut(s) | 1857, 2106 |
| BspHI | TCATGA | 1 cut(s) | 402 |
| BspLI | GGNNCC | 3 cut(s) | 1812, 1952, 2121 |
| BspPI | GGATC | 3 cut(s) | 1987, 2184, 2276 |
| BspQI | GCTCTTC | 1 cut(s) | 2214 |
| BspT104I | TTCGAA | 1 cut(s) | 326 |
| BspT107I | GGYRCC | 1 cut(s) | 1810 |
| BspTNI | GGTCTC | 1 cut(s) | 1775 |
| BsrDI | GCAATG | 3 cut(s) | 711, 1431, 1884 |
| BsrGI | TGTACA | 2 cut(s) | 1090, 1267 |
| BssECI | CCNNGG | 4 cut(s) | 1004, 1477, 2104, 2244 |
| BssMI | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| BssNAI | GTATAC | 1 cut(s) | 798 |
| BssT1I | CCWWGG | 3 cut(s) | 1004, 1477, 2244 |
| Bst1107I | GTATAC | 1 cut(s) | 798 |
| Bst2UI | CCWGG | 2 cut(s) | 697, 2124 |
| Bst4CI | ACNGT | 5 cut(s) | 13, 21, 400, 866, 1035 |
| Bst6I | CTCTTC | 3 cut(s) | 764, 1287, 2214 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1136 |
| BstAUI | TGTACA | 2 cut(s) | 1090, 1267 |
| BstBAI | YACGTR | 1 cut(s) | 206 |
| BstBI | TTCGAA | 1 cut(s) | 326 |
| BstC8I | GCNNGC | 5 cut(s) | 561, 1444, 1498, 1741, 1929 |
| BstDSI | CCRYGG | 3 cut(s) | 1004, 1477, 2104 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1490 |
| BstF5I | GGATG | 9 cut(s) | 101, 666, 958, 1363, 1393, 1666, 1902, 2132, 2253 |
| BstFNI | CGCG | 2 cut(s) | 1857, 2106 |
| BstH2I | RGCGCY | 1 cut(s) | 1530 |
| BstHHI | GCGC | 3 cut(s) | 1363, 1529, 1573 |
| BstKTI | GATC | 7 cut(s) | 754, 962, 1807, 1846, 1995, 2179, 2284 |
| BstMAI | GTCTC | 3 cut(s) | 11, 697, 1775 |
| BstMBI | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 155, 1136, 1524, 1860, 1906, 1937 |
| BstNI | CCWGG | 2 cut(s) | 697, 2124 |
| BstNSI | RCATGY | 5 cut(s) | 522, 563, 625, 1440, 1947 |
| BstSCI | CCNGG | 3 cut(s) | 695, 2122, 2256 |
| BstSLI | GKGCMC | 1 cut(s) | 1520 |
| BstUI | CGCG | 2 cut(s) | 1857, 2106 |
| BstV1I | GCAGC | 5 cut(s) | 1123, 1128, 1755, 1952, 1994 |
| BstX2I | RGATCY | 2 cut(s) | 1992, 2281 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1918 |
| BstYI | RGATCY | 2 cut(s) | 1992, 2281 |
| BstZ17I | GTATAC | 1 cut(s) | 798 |
| BsuRI | GGCC | 5 cut(s) | 282, 1482, 1854, 1863, 2008 |
| BtgI | CCRYGG | 3 cut(s) | 1004, 1477, 2104 |
| BtgZI | GCGATG | 2 cut(s) | 1028, 2108 |
| BtsCI | GGATG | 9 cut(s) | 101, 666, 958, 1363, 1393, 1666, 1902, 2132, 2253 |
| BtsIMutI | CAGTG | 3 cut(s) | 814, 1031, 1518 |
| Cac8I | GCNNGC | 5 cut(s) | 561, 1444, 1498, 1741, 1929 |
| CaiI | CAGNNNCTG | 1 cut(s) | 152 |
| CciI | TCATGA | 1 cut(s) | 402 |
| CfoI | GCGC | 3 cut(s) | 1363, 1529, 1573 |
| Cfr13I | GGNCC | 3 cut(s) | 280, 1861, 1951 |
| Cfr42I | CCGCGG | 1 cut(s) | 2107 |
| CseI | GACGC | 1 cut(s) | 249 |
| Csp6I | GTAC | 6 cut(s) | 417, 928, 1091, 1268, 1427, 1543 |
| CviQI | GTAC | 6 cut(s) | 417, 928, 1091, 1268, 1427, 1543 |
| DpnI | GATC | 7 cut(s) | 753, 961, 1806, 1845, 1994, 2178, 2283 |
| DpnII | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| DraI | TTTAAA | 1 cut(s) | 1185 |
| DraIII | CACNNNGTG | 1 cut(s) | 1037 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2108 |
| DriI | GACNNNNNGTC | 1 cut(s) | 223 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2108 |
| Eam1104I | CTCTTC | 3 cut(s) | 764, 1287, 2214 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 223 |
| EarI | CTCTTC | 3 cut(s) | 764, 1287, 2214 |
| Eco130I | CCWWGG | 3 cut(s) | 1004, 1477, 2244 |
| Eco24I | GRGCYC | 1 cut(s) | 1911 |
| Eco31I | GGTCTC | 1 cut(s) | 1775 |
| Eco47I | GGWCC | 1 cut(s) | 1951 |
| Eco47III | AGCGCT | 1 cut(s) | 1528 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1490 |
| EcoRII | CCWGG | 2 cut(s) | 695, 2122 |
| EcoT14I | CCWWGG | 3 cut(s) | 1004, 1477, 2244 |
| EcoT22I | ATGCAT | 1 cut(s) | 1240 |
| EcoT38I | GRGCYC | 1 cut(s) | 1911 |
| ErhI | CCWWGG | 3 cut(s) | 1004, 1477, 2244 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1484, 1516, 2061, 2093 |
| FauNDI | CATATG | 2 cut(s) | 738, 1240 |
| FbaI | TGATCA | 1 cut(s) | 751 |
| FblI | GTMKAC | 1 cut(s) | 797 |
| Fnu4HI | GCNGC | 6 cut(s) | 1117, 1137, 1744, 1855, 1941, 1983 |
| FokI | GGATG | 9 cut(s) | 88, 673, 965, 1370, 1400, 1673, 1909, 2139, 2240 |
| FriOI | GRGCYC | 1 cut(s) | 1911 |
| Fsp4HI | GCNGC | 6 cut(s) | 1117, 1137, 1744, 1855, 1941, 1983 |
| FspBI | CTAG | 5 cut(s) | 530, 833, 894, 1422, 2291 |
| GlaI | GCGC | 3 cut(s) | 1362, 1528, 1572 |
| GluI | GCNGC | 6 cut(s) | 1117, 1137, 1744, 1855, 1941, 1983 |
| GsaI | CCCAGC | 1 cut(s) | 169 |
| HaeII | RGCGCY | 1 cut(s) | 1530 |
| HaeIII | GGCC | 5 cut(s) | 282, 1482, 1854, 1863, 2008 |
| HapII | CCGG | 2 cut(s) | 2258, 2312 |
| HgaI | GACGC | 1 cut(s) | 249 |
| HhaI | GCGC | 3 cut(s) | 1363, 1529, 1573 |
| Hin6I | GCGC | 3 cut(s) | 1361, 1527, 1571 |
| HinP1I | GCGC | 3 cut(s) | 1361, 1527, 1571 |
| HincII | GTYRAC | 1 cut(s) | 720 |
| HindII | GTYRAC | 1 cut(s) | 720 |
| HinfI | GANTC | 4 cut(s) | 4, 650, 890, 2154 |
| HpaI | GTTAAC | 1 cut(s) | 720 |
| HpaII | CCGG | 2 cut(s) | 2258, 2312 |
| HphI | GGTGA | 3 cut(s) | 478, 848, 1336 |
| Hpy188I | TCNGA | 7 cut(s) | 178, 337, 376, 877, 952, 1348, 2191 |
| Hpy188III | TCNNGA | 5 cut(s) | 403, 514, 530, 2053, 2113 |
| HpyAV | CCTTC | 6 cut(s) | 1198, 1267, 1385, 1696, 1760, 2110 |
| HpyCH4III | ACNGT | 5 cut(s) | 13, 21, 400, 866, 1035 |
| HpyCH4IV | ACGT | 2 cut(s) | 205, 1713 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 155, 1136, 1524, 1860, 1906, 1937 |
| HpySE526I | ACGT | 2 cut(s) | 205, 1713 |
| HspAI | GCGC | 3 cut(s) | 1361, 1527, 1571 |
| Ksp22I | TGATCA | 1 cut(s) | 751 |
| KspAI | GTTAAC | 1 cut(s) | 720 |
| KspI | CCGCGG | 1 cut(s) | 2107 |
| Kzo9I | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| LguI | GCTCTTC | 1 cut(s) | 2214 |
| LmnI | GCTCC | 3 cut(s) | 48, 154, 1687 |
| Lsp1109I | GCAGC | 5 cut(s) | 1123, 1128, 1755, 1952, 1994 |
| LweI | GCATC | 8 cut(s) | 881, 943, 1225, 1348, 1651, 1864, 1887, 2080 |
| MaeI | CTAG | 5 cut(s) | 530, 833, 894, 1422, 2291 |
| MaeII | ACGT | 2 cut(s) | 205, 1713 |
| MaeIII | GTNAC | 5 cut(s) | 842, 1040, 1324, 1714, 2249 |
| MalI | GATC | 7 cut(s) | 753, 961, 1806, 1845, 1994, 2178, 2283 |
| MboI | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| MfeI | CAATTG | 3 cut(s) | 507, 1227, 1902 |
| MflI | RGATCY | 2 cut(s) | 1992, 2281 |
| MhlI | GDGCHC | 2 cut(s) | 1520, 1911 |
| MlyI | GAGTC | 3 cut(s) | 13, 899, 2163 |
| MmeI | TCCRAC | 4 cut(s) | 930, 1038, 2064, 2114 |
| Mph1103I | ATGCAT | 1 cut(s) | 1240 |
| MslI | CAYNNNNRTG | 3 cut(s) | 867, 923, 1959 |
| MspA1I | CMGCKG | 2 cut(s) | 1985, 2106 |
| MspI | CCGG | 2 cut(s) | 2258, 2312 |
| MspR9I | CCNGG | 3 cut(s) | 697, 2124, 2258 |
| MunI | CAATTG | 3 cut(s) | 507, 1227, 1902 |
| Mva1269I | GAATGC | 3 cut(s) | 706, 1015, 2313 |
| MvaI | CCWGG | 2 cut(s) | 697, 2124 |
| MvnI | CGCG | 2 cut(s) | 1857, 2106 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 155, 1136, 1524, 1860, 1906, 1937 |
| NciI | CCSGG | 1 cut(s) | 2258 |
| NcoI | CCATGG | 2 cut(s) | 1004, 1477 |
| NdeI | CATATG | 2 cut(s) | 738, 1240 |
| NdeII | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| NlaIV | GGNNCC | 3 cut(s) | 1812, 1952, 2121 |
| NmuCI | GTSAC | 1 cut(s) | 1324 |
| NsiI | ATGCAT | 1 cut(s) | 1240 |
| NspI | RCATGY | 5 cut(s) | 522, 563, 625, 1440, 1947 |
| NspV | TTCGAA | 1 cut(s) | 326 |
| OliI | CACNNNNGTG | 1 cut(s) | 867 |
| PaeI | GCATGC | 1 cut(s) | 563 |
| PagI | TCATGA | 1 cut(s) | 402 |
| PciI | ACATGT | 2 cut(s) | 518, 621 |
| PciSI | GCTCTTC | 1 cut(s) | 2214 |
| PctI | GAATGC | 3 cut(s) | 706, 1015, 2313 |
| PfeI | GAWTC | 1 cut(s) | 650 |
| PfoI | TCCNGGA | 2 cut(s) | 695, 2256 |
| PkrI | GCNGC | 6 cut(s) | 1118, 1138, 1745, 1856, 1942, 1984 |
| PleI | GAGTC | 3 cut(s) | 12, 898, 2162 |
| PpsI | GAGTC | 3 cut(s) | 12, 898, 2162 |
| Ppu21I | YACGTR | 1 cut(s) | 206 |
| PscI | ACATGT | 2 cut(s) | 518, 621 |
| Psp6I | CCWGG | 2 cut(s) | 695, 2122 |
| PspFI | CCCAGC | 1 cut(s) | 165 |
| PspGI | CCWGG | 2 cut(s) | 695, 2122 |
| PspN4I | GGNNCC | 3 cut(s) | 1812, 1952, 2121 |
| PspPI | GGNCC | 3 cut(s) | 280, 1861, 1951 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 231, 263 |
| PstNI | CAGNNNCTG | 1 cut(s) | 152 |
| PsuI | RGATCY | 2 cut(s) | 1992, 2281 |
| PvuII | CAGCTG | 1 cut(s) | 1985 |
| RsaI | GTAC | 6 cut(s) | 418, 929, 1092, 1269, 1428, 1544 |
| RsaNI | GTAC | 6 cut(s) | 417, 928, 1091, 1268, 1427, 1543 |
| RseI | CAYNNNNRTG | 3 cut(s) | 867, 923, 1959 |
| SacII | CCGCGG | 1 cut(s) | 2107 |
| SapI | GCTCTTC | 1 cut(s) | 2214 |
| SatI | GCNGC | 6 cut(s) | 1117, 1137, 1744, 1855, 1941, 1983 |
| Sau3AI | GATC | 7 cut(s) | 751, 959, 1804, 1843, 1992, 2176, 2281 |
| Sau96I | GGNCC | 3 cut(s) | 280, 1861, 1951 |
| SchI | GAGTC | 3 cut(s) | 13, 899, 2163 |
| ScrFI | CCNGG | 3 cut(s) | 697, 2124, 2258 |
| SduI | GDGCHC | 2 cut(s) | 1520, 1911 |
| SfaNI | GCATC | 8 cut(s) | 881, 943, 1225, 1348, 1651, 1864, 1887, 2080 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1860 |
| Sfr303I | CCGCGG | 1 cut(s) | 2107 |
| SfuI | TTCGAA | 1 cut(s) | 326 |
| SgrBI | CCGCGG | 1 cut(s) | 2107 |
| SinI | GGWCC | 1 cut(s) | 1951 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 867, 923, 1959 |
| SmlI | CTYRAG | 1 cut(s) | 1457 |
| SmoI | CTYRAG | 1 cut(s) | 1457 |
| SphI | GCATGC | 1 cut(s) | 563 |
| SsiI | CCGC | 4 cut(s) | 504, 1855, 2104, 2106 |
| SspMI | CTAG | 5 cut(s) | 530, 833, 894, 1422, 2291 |
| StyD4I | CCNGG | 3 cut(s) | 695, 2122, 2256 |
| StyI | CCWWGG | 3 cut(s) | 1004, 1477, 2244 |
| TaaI | ACNGT | 5 cut(s) | 13, 21, 400, 866, 1035 |
| TaiI | ACGT | 2 cut(s) | 208, 1716 |
| TaqI | TCGA | 2 cut(s) | 326, 725 |
| TaqII | GACCGA | 1 cut(s) | 802 |
| TatI | WGTACW | 5 cut(s) | 416, 927, 1090, 1267, 1426 |
| TauI | GCSGC | 1 cut(s) | 1857 |
| TfiI | GAWTC | 1 cut(s) | 650 |
| TscAI | CASTG | 3 cut(s) | 814, 1038, 1525 |
| TseFI | GTSAC | 1 cut(s) | 1324 |
| TseI | GCWGC | 5 cut(s) | 1116, 1136, 1743, 1940, 1982 |
| Tsp45I | GTSAC | 1 cut(s) | 1324 |
| TspRI | CASTG | 3 cut(s) | 814, 1038, 1525 |
| VneI | GTGCAC | 1 cut(s) | 1516 |
| VpaK11BI | GGWCC | 1 cut(s) | 1951 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1490 |
| XapI | RAATTY | 5 cut(s) | 491, 976, 1145, 1167, 2162 |
| XbaI | TCTAGA | 1 cut(s) | 529 |
| XceI | RCATGY | 5 cut(s) | 522, 563, 625, 1440, 1947 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 521, 2130 |
| XmiI | GTMKAC | 1 cut(s) | 797 |
| XspI | CTAG | 5 cut(s) | 530, 833, 894, 1422, 2291 |
| Zsp2I | ATGCAT | 1 cut(s) | 1240 |