Rorug01G0364400

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0017394
Physical Location & Seq
Reverse (-)
47913295 .. 47915848
2554 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0364400.1

Sequence Viewer

Length: 1956 bp
ATGGCCGGAAAAGGAGAGGGACCAGCGATCGGAATCGATCTCGGAACCACGTACAGTTGCGTCGGAGTTTGGCAGCACGACCGTGTCGAGATCATCGCCAACGATCAGGGGAACCGAACGACGCCGTCTTATGTGGGGTTTACTGATACCGAGCGTTTGATCGGTGACGCGGCTAAGAACCAGGTCGCGATGAACCCTATCAACACTGTTTTCGATGCAAAGCGGCTAATTGGTAGGAGATTTAGTGACGCCTCTGTTCAGGGAGACATGAAGTTATGGCCTTTCAAGGTTGTTGCCGGCCCTGGTGACAAGCCCATGATTAATGTTACTTACAAAGGTGAAGAGAAACAGTTTGCTGCAGAAGAAATCTCATCTATGGTTCTAGTCAAGATGCGAGAGATTGCAGAGGCTTATCTTGGGATAACAATTAAGAATGCTGTTGTTACTGTGCCAGCATACTTCAACGACTCTCAGAGACAGGCCACAAAGGATGCTGGGGTCATTGCTGGCCTTAATGTGCTTCGTATCATCAATGAGCCTACTGCTGCTGCCATTGCATATGGTCTTGACAAGAAGGCAACCAGTGTTGGTGAAAAGAATGTGTTGATTTTCGATCTTGGTGGAGGTACTTTTGATGTCTCTCTACTTACAATTGAAGAAGGGATATTTGAGGTGAAGTCTACTGCTGGAGATACCCATTTGGGTGGTGAGGATTTTGATAACAGGATGGTGAATCACTTTGTTCAGGAGTTCAAGAGGAAGAACAAAAAAGACATCAGTGGAAACCCAAGAGCTCTTAGGAGGTTGAGGACAGCTTGTGAGAGAGCAAAGAGGACTCTCTCGTCCACTGCTCAGACTACCATTGAGATTGACTCGCTCTTTGAGGGTATCGACTTCTATTCCACCATTACCCGTGCTAGGTTTGAAGAGCTTAACATGGATCTGTTTAGAAAGTGTATGGAGCCGGTTGAGAAGTGTCTGAGAGATGCAAAGATGGACAAGAGTACTGTCCATGATGTGGTCCTTGTGGGTGGTTCTACTAGGATTCCCAAAGTTCAGCAGTTGTTGCAAGACTTCTTCAATGGAAAGGAACTGTGCAAAAGCATCAACCCAGACGAAGCTGTTGCTTATGGAGCAGCTGTGCAGGCGGCTATTCTTAGTGGTGAGGGTAATGAGAAGGTGCAGGACCTATTGCTTCTTGATGTGACTCCTCTGTCCCAGGGTCTGGAAACAGCTGGAGGTGTGATGACTGTGTTGATTCCCAGGAATACAACAATTCCAACAAAAAAGGAGCAGGTTTTCTCTACTTACTCAGACAATCAACCCGGTGTCTTGATTCAAGTCTTTGAGGGTGAAAGGGCGAGGACTCGTGATAACAACTTGCTGGGCAAGTTTGAGCTTTCAGGCATTCCTCCAGCACCAAGGGGAGTACCTCAGATCACTGTTTGCTTTGACATCGATGCTAATGGCATTCTCAATGTCTCTGCTGAGGACAAGACTACAGGCCAGAAGAACAAGATTACAATCACTAATGACAAGGGAAGGCTGTCCAAAGAGGAGATCGAGAAGATGGTTCAAGAAGCTGAGAAGTACAAGTCAGAAGATGAGGAGCTCAAGAAGAAGGTGGAATCAAAGAATGCCCTGGAGAACTATGCTTATAACATGAGGAACACAATCAGAGATGAGAAGATTGCTTCCAAGCTTGACGCTGCAGACAAGAAGAAGATTGAAGATGCAATTGAGCAAGCCATTCAATGGCTGGATGGGAATCAGCTTGCCGAGGCTGAGGAATATGATGACAAGGTGAAGGAGCTTGAAGGCATTTGCAATCCCATCATTGCCAAGATGTATCAGGGGGGTGCTGCTCCCGACATGGGTATGGGTGGAGGCATGGATGAAGATGTTCCTCCTGCTGGTGGCAGTGGTGCTGGTCCCAAGATCGAGGAAGTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

651

Amino Acids

71.27

Weight (kDa)

5.08

Isoelectric Point (pI)

34.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 618 4.2e-260 Hsp70 protein
MreB_Mbl PF06723 139 - 380 1.7e-13 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017394)

Species Orthologous Gene IDs
malus_domestica MD07G1229500.v1.1
prunus_persica Prupe.2G259700_v2.0.a1
pyrus_communis pycom07g20760
rosa_laevigata RLG00000026956
rosa_multiflora Rmu_sc0000809.1_g000018
rosa_roxburghii Rroxscaffold_4G00285630
rosa_rugosa Rorug01G0364300 Rorug01G0364400
rosa_samantha Rh1AG374700 Rh1BG338100 Rh1CG351400 Rh1DG369100
rosa_wichuraiana Rw1G032960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1659
AasI GACNNNNNNGTC 2 cut(s) 841, 1213
Acc36I ACCTGC 1 cut(s) 1285
AccB7I CCANNNNNTGG 3 cut(s) 1018, 1225, 1755
AccI GTMKAC 1 cut(s) 680
AccII CGCG 2 cut(s) 170, 188
AciI CCGC 3 cut(s) 170, 223, 1148
AclWI GGATC 1 cut(s) 948
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 2 cut(s) 122, 249
AfaI GTAC 5 cut(s) 53, 628, 1006, 1431, 1592
AfiI CCNNNNNNNGG 8 cut(s) 29, 918, 1018, 1225, 1755, 1874, 1913, 1916
AjnI CCWGG 5 cut(s) 180, 301, 1218, 1262, 1641
AleI CACNNNNGTG 1 cut(s) 81
Alw21I GWGCWC 2 cut(s) 796, 1614
Alw26I GTCTC 4 cut(s) 258, 469, 643, 1486
AlwI GGATC 1 cut(s) 948
AlwNI CAGNNNCTG 1 cut(s) 1225
AoxI GGCC 6 cut(s) 3, 278, 298, 480, 508, 1504
ApeKI GCWGC 7 cut(s) 73, 356, 545, 548, 1136, 1709, 1862
ArsI GACNNNNNNTTYG 2 cut(s) 863, 895
AseI ATTAAT 1 cut(s) 321
Asp700I GAANNNNTTC 1 cut(s) 1902
AspS9I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1931
AsuC2I CCSGG 1 cut(s) 1326
AvaII GGWCC 4 cut(s) 20, 1021, 1186, 1931
BanII GRGCYC 2 cut(s) 796, 1614
BauI CACGAG 1 cut(s) 1368
Bbv12I GWGCWC 2 cut(s) 796, 1614
BbvCI CCTCAGC 2 cut(s) 1488, 1785
BbvI GCAGC 7 cut(s) 85, 343, 532, 535, 1148, 1696, 1849
BccI CCATC 5 cut(s) 721, 988, 1564, 1757, 1841
BceAI ACGGC 1 cut(s) 109
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciT130I CCWGG 5 cut(s) 182, 303, 1220, 1264, 1643
BcnI CCSGG 1 cut(s) 1326
BcoDI GTCTC 4 cut(s) 258, 469, 643, 1486
BfaI CTAG 3 cut(s) 383, 918, 1041
BfmI CTRYAG 3 cut(s) 357, 1500, 1710
BfuAI ACCTGC 1 cut(s) 1285
BmcAI AGTACT 1 cut(s) 1006
Bme1390I CCNGG 6 cut(s) 182, 303, 1220, 1264, 1326, 1643
Bme18I GGWCC 4 cut(s) 20, 1021, 1186, 1931
BmgT120I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1931
BmiI GGNNCC 5 cut(s) 21, 46, 113, 963, 1933
BmrFI CCNGG 6 cut(s) 182, 303, 1220, 1264, 1326, 1643
BmsI GCATC 7 cut(s) 205, 381, 481, 976, 1113, 1450, 1723
BplI GAGNNNNNCTC 2 cut(s) 857, 889
BpmI CTGGAG 4 cut(s) 708, 1257, 1398, 1664
Bpu10I CCTNAGC 2 cut(s) 1488, 1785
BpuEI CTTGAG 1 cut(s) 1598
BpuMI CCSGG 1 cut(s) 1326
Bsa29I ATCGAT 2 cut(s) 36, 1458
BsaAI YACGTR 1 cut(s) 51
BsaBI GATNNNNATC 3 cut(s) 32, 1523, 1767
BsaHI GRCGYC 2 cut(s) 122, 249
BsaJI CCNNGG 7 cut(s) 301, 1218, 1219, 1262, 1421, 1641, 1779
BsaXI ACNNNNNCTCC 4 cut(s) 229, 259, 1125, 1155
Bsc4I CCNNNNNNNGG 8 cut(s) 29, 918, 1018, 1225, 1755, 1874, 1913, 1916
Bse118I RCCGGY 2 cut(s) 296, 964
Bse1I ACTGG 1 cut(s) 582
Bse3DI GCAATG 3 cut(s) 501, 552, 1836
Bse8I GATNNNNATC 3 cut(s) 32, 1523, 1767
BseBI CCWGG 5 cut(s) 182, 303, 1220, 1264, 1643
BseCI ATCGAT 2 cut(s) 36, 1458
BseDI CCNNGG 7 cut(s) 301, 1218, 1219, 1262, 1421, 1641, 1779
BseGI GGATG 4 cut(s) 496, 732, 1768, 1900
BseJI GATNNNNATC 3 cut(s) 32, 1523, 1767
BseLI CCNNNNNNNGG 8 cut(s) 29, 918, 1018, 1225, 1755, 1874, 1913, 1916
BseMI GCAATG 3 cut(s) 501, 552, 1836
BseMII CTCAG 8 cut(s) 485, 866, 971, 1326, 1448, 1479, 1575, 1776
BseNI ACTGG 1 cut(s) 582
BseRI GAGGAG 3 cut(s) 1200, 1571, 1622
BseXI GCAGC 7 cut(s) 85, 343, 532, 535, 1148, 1696, 1849
BseYI CCCAGC 2 cut(s) 494, 1384
BsgI GTGCAG 2 cut(s) 1163, 1202
Bsh1236I CGCG 2 cut(s) 170, 188
Bsh1285I CGRYCG 2 cut(s) 30, 82
BshFI GGCC 6 cut(s) 5, 280, 300, 482, 510, 1506
BshVI ATCGAT 2 cut(s) 36, 1458
BsiEI CGRYCG 2 cut(s) 30, 82
BsiHKAI GWGCWC 2 cut(s) 796, 1614
BsiSI CCGG 4 cut(s) 6, 297, 965, 1326
BslFI GGGAC 3 cut(s) 33, 1201, 1917
BslI CCNNNNNNNGG 8 cut(s) 29, 918, 1018, 1225, 1755, 1874, 1913, 1916
BsmAI GTCTC 4 cut(s) 258, 469, 643, 1486
BsmFI GGGAC 3 cut(s) 33, 1201, 1917
BsmI GAATGC 4 cut(s) 439, 1407, 1470, 1642
BsnI GGCC 6 cut(s) 5, 280, 300, 482, 510, 1506
Bsp1286I GDGCHC 2 cut(s) 796, 1614
Bsp68I TCGCGA 1 cut(s) 188
BspACI CCGC 3 cut(s) 170, 223, 1148
BspANI GGCC 6 cut(s) 5, 280, 300, 482, 510, 1506
BspCNI CTCAG 8 cut(s) 484, 865, 972, 1325, 1447, 1480, 1576, 1777
BspDI ATCGAT 2 cut(s) 36, 1458
BspFNI CGCG 2 cut(s) 170, 188
BspLI GGNNCC 5 cut(s) 21, 46, 113, 963, 1933
BspMAI CTGCAG 2 cut(s) 361, 1714
BspMI ACCTGC 1 cut(s) 1285
BspPI GGATC 1 cut(s) 948
BspQI GCTCTTC 1 cut(s) 921
BsrDI GCAATG 3 cut(s) 501, 552, 1836
BsrFI RCCGGY 2 cut(s) 296, 964
BsrI ACTGG 1 cut(s) 582
BssAI RCCGGY 2 cut(s) 296, 964
BssECI CCNNGG 7 cut(s) 301, 1218, 1219, 1262, 1421, 1641, 1779
BssNI GRCGYC 2 cut(s) 122, 249
BssSI CACGAG 1 cut(s) 1368
BssT1I CCWWGG 1 cut(s) 1421
Bst2BI CACGAG 1 cut(s) 1368
Bst2UI CCWGG 5 cut(s) 182, 303, 1220, 1264, 1643
Bst4CI ACNGT 9 cut(s) 56, 83, 208, 351, 448, 1009, 1095, 1252, 1444
Bst6I CTCTTC 2 cut(s) 336, 921
BstACI GRCGYC 2 cut(s) 122, 249
BstAPI GCANNNNNTGC 1 cut(s) 1066
BstBAI YACGTR 1 cut(s) 51
BstC8I GCNNGC 6 cut(s) 298, 453, 508, 1146, 1746, 1776
BstF5I GGATG 4 cut(s) 496, 732, 1768, 1900
BstFNI CGCG 2 cut(s) 170, 188
BstMAI GTCTC 4 cut(s) 258, 469, 643, 1486
BstMCI CGRYCG 2 cut(s) 30, 82
BstMWI GCNNNNNNNGC 4 cut(s) 554, 1066, 1133, 1145
BstNI CCWGG 5 cut(s) 182, 303, 1220, 1264, 1643
BstSCI CCNGG 6 cut(s) 180, 301, 1218, 1262, 1324, 1641
BstSFI CTRYAG 3 cut(s) 357, 1500, 1710
BstUI CGCG 2 cut(s) 170, 188
BstV1I GCAGC 7 cut(s) 85, 343, 532, 535, 1148, 1696, 1849
BstX2I RGATCY 1 cut(s) 940
BstXI CCANNNNNNTGG 1 cut(s) 704
BstYI RGATCY 1 cut(s) 940
Bsu15I ATCGAT 2 cut(s) 36, 1458
BsuRI GGCC 6 cut(s) 5, 280, 300, 482, 510, 1506
BsuTUI ATCGAT 2 cut(s) 36, 1458
BtgZI GCGATG 2 cut(s) 79, 203
BtsCI GGATG 4 cut(s) 496, 732, 1768, 1900
BtsI GCAGTG 2 cut(s) 846, 1927
BtsIMutI CAGTG 6 cut(s) 204, 589, 784, 846, 1440, 1927
BtuMI TCGCGA 1 cut(s) 188
BveI ACCTGC 1 cut(s) 1285
Cac8I GCNNGC 6 cut(s) 298, 453, 508, 1146, 1746, 1776
CaiI CAGNNNCTG 1 cut(s) 1225
Cfr10I RCCGGY 2 cut(s) 296, 964
Cfr13I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1931
ClaI ATCGAT 2 cut(s) 36, 1458
CseI GACGC 5 cut(s) 49, 130, 176, 257, 1715
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 5 cut(s) 52, 627, 1005, 1430, 1591
CviAII CATG 7 cut(s) 268, 316, 937, 1013, 1663, 1873, 1891
CviQI GTAC 5 cut(s) 52, 627, 1005, 1430, 1591
DrdI GACNNNNNNGTC 2 cut(s) 841, 1213
DseDI GACNNNNNNGTC 2 cut(s) 841, 1213
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 336, 921
EarI CTCTTC 2 cut(s) 336, 921
Ecl136II GAGCTC 2 cut(s) 794, 1612
Eco130I CCWWGG 1 cut(s) 1421
Eco24I GRGCYC 2 cut(s) 796, 1614
Eco47I GGWCC 4 cut(s) 20, 1021, 1186, 1931
Eco53kI GAGCTC 2 cut(s) 794, 1612
EcoICRI GAGCTC 2 cut(s) 794, 1612
EcoO109I RGGNCCY 1 cut(s) 1186
EcoRII CCWGG 5 cut(s) 180, 301, 1218, 1262, 1641
EcoT14I CCWWGG 1 cut(s) 1421
EcoT38I GRGCYC 2 cut(s) 796, 1614
ErhI CCWWGG 1 cut(s) 1421
FaeI CATG 7 cut(s) 271, 319, 940, 1016, 1666, 1876, 1894
FaqI GGGAC 3 cut(s) 33, 1201, 1917
FatI CATG 7 cut(s) 267, 315, 936, 1012, 1662, 1872, 1890
FauNDI CATATG 1 cut(s) 559
FblI GTMKAC 1 cut(s) 680
FokI GGATG 4 cut(s) 503, 739, 1775, 1907
FriOI GRGCYC 2 cut(s) 796, 1614
FspBI CTAG 3 cut(s) 383, 918, 1041
GsaI CCCAGC 2 cut(s) 498, 1388
GsuI CTGGAG 4 cut(s) 708, 1257, 1398, 1664
HaeIII GGCC 6 cut(s) 5, 280, 300, 482, 510, 1506
HapII CCGG 4 cut(s) 6, 297, 965, 1326
HgaI GACGC 5 cut(s) 49, 130, 176, 257, 1715
Hin1I GRCGYC 2 cut(s) 122, 249
Hin1II CATG 7 cut(s) 271, 319, 940, 1016, 1666, 1876, 1894
HindIII AAGCTT 1 cut(s) 1700
HpaII CCGG 4 cut(s) 6, 297, 965, 1326
Hpy166II GTNNAC 3 cut(s) 141, 681, 846
Hpy8I GTNNAC 3 cut(s) 141, 681, 846
Hpy99I CGWCG 2 cut(s) 65, 124
HpyAV CCTTC 7 cut(s) 568, 653, 1171, 1536, 1615, 1801, 1811
HpyCH4III ACNGT 9 cut(s) 56, 83, 208, 351, 448, 1009, 1095, 1252, 1444
HpyCH4IV ACGT 1 cut(s) 50
HpyF10VI GCNNNNNNNGC 4 cut(s) 554, 1066, 1133, 1145
HpySE526I ACGT 1 cut(s) 50
Hsp92I GRCGYC 2 cut(s) 122, 249
Hsp92II CATG 7 cut(s) 271, 319, 940, 1016, 1666, 1876, 1894
KroI GCCGGC 1 cut(s) 296
KroNI GCCGGC 1 cut(s) 298
LguI GCTCTTC 1 cut(s) 921
LmnI GCTCC 6 cut(s) 961, 1133, 1291, 1609, 1810, 1870
Lsp1109I GCAGC 7 cut(s) 85, 343, 532, 535, 1148, 1696, 1849
LweI GCATC 7 cut(s) 205, 381, 481, 976, 1113, 1450, 1723
MabI ACCWGGT 1 cut(s) 180
MaeI CTAG 3 cut(s) 383, 918, 1041
MaeII ACGT 1 cut(s) 50
MaeIII GTNAC 6 cut(s) 164, 245, 305, 325, 442, 1204
MfeI CAATTG 2 cut(s) 651, 1737
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 2 cut(s) 796, 1614
MluCI AATT 5 cut(s) 228, 426, 651, 1275, 1737
MlyI GAGTC 5 cut(s) 461, 829, 866, 1201, 1360
MmeI TCCRAC 2 cut(s) 43, 1304
MroNI GCCGGC 1 cut(s) 296
MroXI GAANNNNTTC 1 cut(s) 1902
MseI TTAA 5 cut(s) 321, 429, 513, 933, 1954
MslI CAYNNNNRTG 3 cut(s) 81, 702, 1877
MspA1I CMGCKG 2 cut(s) 1139, 1235
MspI CCGG 4 cut(s) 6, 297, 965, 1326
MspR9I CCNGG 6 cut(s) 182, 303, 1220, 1264, 1326, 1643
MunI CAATTG 2 cut(s) 651, 1737
Mva1269I GAATGC 4 cut(s) 439, 1407, 1470, 1642
MvaI CCWGG 5 cut(s) 182, 303, 1220, 1264, 1643
MvnI CGCG 2 cut(s) 170, 188
MwoI GCNNNNNNNGC 4 cut(s) 554, 1066, 1133, 1145
NaeI GCCGGC 1 cut(s) 298
NciI CCSGG 1 cut(s) 1326
NdeI CATATG 1 cut(s) 559
NgoMIV GCCGGC 1 cut(s) 296
NlaIII CATG 7 cut(s) 271, 319, 940, 1016, 1666, 1876, 1894
NlaIV GGNNCC 5 cut(s) 21, 46, 113, 963, 1933
NmeAIII GCCGAG 1 cut(s) 1804
NmuCI GTSAC 4 cut(s) 164, 245, 305, 1204
NruI TCGCGA 1 cut(s) 188
OliI CACNNNNGTG 1 cut(s) 81
PasI CCCWGGG 1 cut(s) 1219
PciSI GCTCTTC 1 cut(s) 921
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 4 cut(s) 439, 1407, 1470, 1642
PdiI GCCGGC 1 cut(s) 298
PdmI GAANNNNTTC 1 cut(s) 1902
PfeI GAWTC 7 cut(s) 33, 733, 1045, 1258, 1336, 1628, 1768
PflFI GACNNNGTC 2 cut(s) 83, 124
PflMI CCANNNNNTGG 3 cut(s) 1018, 1225, 1755
Ple19I CGATCG 1 cut(s) 30
PleI GAGTC 5 cut(s) 461, 829, 866, 1201, 1360
PpsI GAGTC 5 cut(s) 461, 829, 866, 1201, 1360
Ppu21I YACGTR 1 cut(s) 51
PpuMI RGGWCCY 1 cut(s) 1186
PshBI ATTAAT 1 cut(s) 321
PsiI TTATAA 1 cut(s) 1659
Psp124BI GAGCTC 2 cut(s) 796, 1614
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 5 cut(s) 180, 301, 1218, 1262, 1641
PspFI CCCAGC 2 cut(s) 494, 1384
PspGI CCWGG 5 cut(s) 180, 301, 1218, 1262, 1641
PspN4I GGNNCC 5 cut(s) 21, 46, 113, 963, 1933
PspPI GGNCC 5 cut(s) 20, 299, 1021, 1186, 1931
PspPPI RGGWCCY 1 cut(s) 1186
PstI CTGCAG 2 cut(s) 361, 1714
PstNI CAGNNNCTG 1 cut(s) 1225
PsuI RGATCY 1 cut(s) 940
PsyI GACNNNGTC 2 cut(s) 83, 124
PvuI CGATCG 1 cut(s) 30
PvuII CAGCTG 2 cut(s) 1139, 1235
RruI TCGCGA 1 cut(s) 188
RsaI GTAC 5 cut(s) 53, 628, 1006, 1431, 1592
RsaNI GTAC 5 cut(s) 52, 627, 1005, 1430, 1591
RseI CAYNNNNRTG 3 cut(s) 81, 702, 1877
SacI GAGCTC 2 cut(s) 796, 1614
SapI GCTCTTC 1 cut(s) 921
SaqAI TTAA 5 cut(s) 321, 429, 513, 933, 1954
Sau96I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1931
ScaI AGTACT 1 cut(s) 1006
SchI GAGTC 5 cut(s) 461, 829, 866, 1201, 1360
ScrFI CCNGG 6 cut(s) 182, 303, 1220, 1264, 1326, 1643
SduI GDGCHC 2 cut(s) 796, 1614
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 7 cut(s) 205, 381, 481, 976, 1113, 1450, 1723
SfcI CTRYAG 3 cut(s) 357, 1500, 1710
SinI GGWCC 4 cut(s) 20, 1021, 1186, 1931
SmiMI CAYNNNNRTG 3 cut(s) 81, 702, 1877
SmlI CTYRAG 1 cut(s) 1613
SmoI CTYRAG 1 cut(s) 1613
Sse9I AATT 5 cut(s) 228, 426, 651, 1275, 1737
SsiI CCGC 3 cut(s) 170, 223, 1148
SspMI CTAG 3 cut(s) 383, 918, 1041
SstI GAGCTC 2 cut(s) 796, 1614
StyD4I CCNGG 6 cut(s) 180, 301, 1218, 1262, 1324, 1641
StyI CCWWGG 1 cut(s) 1421
TaaI ACNGT 9 cut(s) 56, 83, 208, 351, 448, 1009, 1095, 1252, 1444
TaiI ACGT 1 cut(s) 53
TaqI TCGA 8 cut(s) 36, 87, 213, 612, 891, 1458, 1563, 1941
TasI AATT 5 cut(s) 228, 426, 651, 1275, 1737
TatI WGTACW 2 cut(s) 1004, 1590
TauI GCSGC 3 cut(s) 173, 226, 1151
TfiI GAWTC 7 cut(s) 33, 733, 1045, 1258, 1336, 1628, 1768
Tru1I TTAA 5 cut(s) 321, 429, 513, 933, 1954
Tru9I TTAA 5 cut(s) 321, 429, 513, 933, 1954
TscAI CASTG 6 cut(s) 211, 589, 784, 853, 1447, 1927
TseFI GTSAC 4 cut(s) 164, 245, 305, 1204
TseI GCWGC 7 cut(s) 73, 356, 545, 548, 1136, 1709, 1862
Tsp45I GTSAC 4 cut(s) 164, 245, 305, 1204
TspDTI ATGAA 3 cut(s) 206, 284, 1911
TspRI CASTG 6 cut(s) 211, 589, 784, 853, 1447, 1927
Tth111I GACNNNGTC 2 cut(s) 83, 124
Van91I CCANNNNNTGG 3 cut(s) 1018, 1225, 1755
VpaK11BI GGWCC 4 cut(s) 20, 1021, 1186, 1931
VspI ATTAAT 1 cut(s) 321
XcmI CCANNNNNNNNNTGG 1 cut(s) 1756
XmiI GTMKAC 1 cut(s) 680
XmnI GAANNNNTTC 1 cut(s) 1902
XspI CTAG 3 cut(s) 383, 918, 1041
ZrmI AGTACT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.