Rorug01G0364300

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0017394
Physical Location & Seq
Reverse (-)
47909217 .. 47911833
2617 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0364300.1

Sequence Viewer

Length: 1950 bp
ATGGCCGGAAAAGGAGAGGGACCGGCGATCGGAATCGACCTCGGCACCACCTACTCCTGCGTCGGAGTGTGGCAGCACGACCGTGTTGAGATCATAGCCAACGATCAGGGGAACCGGACGACGCCGTCTTATGTGGCGTTCACTGACACCGAGCGTTTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTATCAACACCGTTTTCGATGCAAAGCGGTTGATTGGTAGGAGGTTTAGTGACTCCACTGTTCAGGGTGACATGAAGCTATGGCCTTTCAAGGTCACTGCTGGGCCAGGTGACAAACCCATGATTGGTGTTACTTACAAAGCAGAGGAGAAACAGTTTGCAGCAGAAGAAGTTTCGTCTATGGTTCTCATTAAGATGAGGGAGATCGCAGAGGCTTATCTTGGCACAACAGTCAAGAATGCAGTTGTGACTGTGCCTGCATACTTCAATGACTCTCAGAGGCAGGCTACAAAGGATGCTGGGGTCATTGCTGGCCTTAATGTGATGCGAATCATCAATGAGCCTACAGCTGCAGCCATTGCATATGGTCTTGACAAGAAGGCAACCAGTGTTGGAGAGAAGAATGTGTTGATTTTCGATCTTGGTGGAGGTACTTTCGATGTCTCTCTACTTACCATTGAAGAAGGTATTTTTGAGGTGAAGGCTACTGCTGGAGATACCCATTTGGGAGGAGAGGATTTTGATAATAGGATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAGAACAAGAAGGACATCAGTGGAAATCCAAGAGCTCTTAGGAGGTTGAGGACATCTTGTGAGAGAGCAAAGAGGACTCTCTCATCCACTGCTCAGACTACCATTGAGATCGACTCCCTGTTTGAGGGTATTGACTTCTATTCAACCATTACCCGTGCTAGGTTTGAAGAGCTTAACATGGATCTGTTTAGAAAGTGTATGGAGCCGGTTGAGAAGTGTCTGAGAGATGCAAAGATGGACAAGAGTACTGTCCATGATGTGGTCCTTGTGGGTGGTTCTACTAGGATTCCCAAAGTCCAACAGTTGTTGCAAGACTTCTTCAATGGAAAGGAACTGTGCAAAAGCATTAACCCGGACGAAGCTGTTGCTTATGGAGCCGCTGTGCAGGCTGCTATTCTTAGTGGTGAGGGTAATGAGAAGGTGCAGGACCTATTGCTTCTTGATGTGACTCCTCTGTCCTTGGGTTTGGAAACAGCTGGAGGTGTGATGACCGTGTTGATTCCCAGGAATACCACCATTCCAACCAAGAAAGAGCAAGTGTTCTCTACTTATTCAGATAATCAGCCTGGTGTCTTGATCCAGGTTTATGAGGGTGAGCGGACAAGGACTCGTGACAACAATTTGCTGGGCAAATTTGAGCTTTCTGGCATTCCTCCAGCTCCTAGGGGAGTTCCTCAGATTACTGTTTGCTTTGACATCGATGCCAATGGCATTCTCAATGTGTCTGCTGAGGACAAGACCACAGGGCAGAAGAACAAGATTACTATTACCAATGACAAGGGAAGGCTATCGAAGGAGGAAATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAAGCAGAAGATGAGGAGCACAAGAAGAAGGTCGAGGCTAAGAATGCTCTTGAGAATTATGCTTACAACATGAGGAACACCATCAAGGATGACAAGATTGCTTCAAAGATTGACCCATCTGACAAAAAGAAGATTGAAGATGCAATTGATCAGGCCATTCAGTGGCTCGATAATAATCAGCTAGCAGAGGCTGATGAATTCGAGGACAAGATGAAGGAGCTCGAGAGTCTTTGCAACCCTATCATTGCCAAGATGTACCAGGGTGGTGCTGCTCCTGACATGGGTGGCGGTGGGGAAGCTGATGTTCCTCCTTCTGGTGGAAGTGGGGCTGGTCCAAAGATTGAAGAAGTCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

649

Amino Acids

71.09

Weight (kDa)

5.14

Isoelectric Point (pI)

32.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 618 5.7e-262 Hsp70 protein
MreB_Mbl PF06723 141 - 380 4.1e-13 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017394)

Species Orthologous Gene IDs
malus_domestica MD07G1229500.v1.1
prunus_persica Prupe.2G259700_v2.0.a1
pyrus_communis pycom07g20760
rosa_laevigata RLG00000026956
rosa_multiflora Rmu_sc0000809.1_g000018
rosa_roxburghii Rroxscaffold_4G00285630
rosa_rugosa Rorug01G0364300 Rorug01G0364400
rosa_samantha Rh1AG374700 Rh1BG338100 Rh1CG351400 Rh1DG369100
rosa_wichuraiana Rw1G032960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 124, 1213
AccB1I GGYRCC 1 cut(s) 44
AccB7I CCANNNNNTGG 2 cut(s) 1018, 1755
AccBSI CCGCTC 1 cut(s) 1357
AccI GTMKAC 1 cut(s) 1944
AciI CCGC 5 cut(s) 171, 223, 1137, 1357, 1881
AclWI GGATC 2 cut(s) 948, 1330
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 1391, 1790
AcyI GRCGYC 1 cut(s) 122
AfaI GTAC 4 cut(s) 628, 1006, 1592, 1850
AfiI CCNNNNNNNGG 9 cut(s) 29, 320, 883, 918, 1018, 1755, 1874, 1907, 1910
AjnI CCWGG 6 cut(s) 180, 301, 1262, 1324, 1338, 1851
AleI CACNNNNGTG 1 cut(s) 81
Alw21I GWGCWC 3 cut(s) 796, 1614, 1815
Alw26I GTCTC 1 cut(s) 643
AlwI GGATC 2 cut(s) 948, 1330
AlwNI CAGNNNCTG 1 cut(s) 1784
Ama87I CYCGRG 1 cut(s) 1814
AoxI GGCC 5 cut(s) 3, 278, 299, 508, 1746
ApeKI GCWGC 6 cut(s) 73, 356, 545, 548, 1148, 1862
ApoI RAATTY 2 cut(s) 1391, 1790
ArsI GACNNNNNNTTYG 2 cut(s) 863, 895
AspA2I CCTAGG 1 cut(s) 1421
AspS9I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1925
AsuC2I CCSGG 1 cut(s) 1112
AsuHPI GGTGA 7 cut(s) 176, 275, 317, 685, 742, 1175, 1364
AsuNHI GCTAGC 1 cut(s) 1774
AvaI CYCGRG 1 cut(s) 1814
AvaII GGWCC 4 cut(s) 20, 1021, 1186, 1925
AvrII CCTAGG 1 cut(s) 1421
BanI GGYRCC 1 cut(s) 44
BanII GRGCYC 2 cut(s) 796, 1815
BauI CACGAG 1 cut(s) 1368
Bbv12I GWGCWC 3 cut(s) 796, 1614, 1815
BbvCI CCTCAGC 1 cut(s) 1488
BbvI GCAGC 6 cut(s) 85, 368, 532, 560, 1135, 1849
BccI CCATC 5 cut(s) 721, 988, 1564, 1682, 1717
BceAI ACGGC 1 cut(s) 109
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciT130I CCWGG 6 cut(s) 182, 303, 1264, 1326, 1340, 1853
BclI TGATCA 1 cut(s) 1741
BcnI CCSGG 1 cut(s) 1112
BcoDI GTCTC 1 cut(s) 643
BfaI CTAG 4 cut(s) 918, 1041, 1422, 1775
BfmI CTRYAG 2 cut(s) 540, 546
BisI GCNGC 8 cut(s) 74, 171, 357, 546, 549, 1137, 1149, 1863
BlnI CCTAGG 1 cut(s) 1421
BlsI GCNGC 8 cut(s) 75, 172, 358, 547, 550, 1138, 1150, 1864
BmcAI AGTACT 1 cut(s) 1006
Bme1390I CCNGG 7 cut(s) 182, 303, 1112, 1264, 1326, 1340, 1853
Bme18I GGWCC 4 cut(s) 20, 1021, 1186, 1925
BmeT110I CYCGRG 1 cut(s) 1814
BmgT120I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1925
BmiI GGNNCC 5 cut(s) 21, 46, 113, 963, 1135
BmrFI CCNGG 7 cut(s) 182, 303, 1112, 1264, 1326, 1340, 1853
BmsI GCATC 7 cut(s) 157, 205, 481, 510, 976, 1450, 1723
BmtI GCTAGC 1 cut(s) 1778
BplI GAGNNNNNCTC 2 cut(s) 857, 889
BpmI CTGGAG 3 cut(s) 708, 1257, 1398
Bpu10I CCTNAGC 1 cut(s) 1488
BpuEI CTTGAG 1 cut(s) 1664
BpuMI CCSGG 1 cut(s) 1112
Bsa29I ATCGAT 1 cut(s) 1458
BsaBI GATNNNNATC 3 cut(s) 32, 524, 1767
BsaHI GRCGYC 1 cut(s) 122
BsaJI CCNNGG 5 cut(s) 40, 1218, 1262, 1421, 1852
BsaWI WCCGGW 1 cut(s) 114
BsaXI ACNNNNNCTCC 6 cut(s) 229, 259, 335, 365, 1125, 1155
Bsc4I CCNNNNNNNGG 9 cut(s) 29, 320, 883, 918, 1018, 1755, 1874, 1907, 1910
Bse118I RCCGGY 2 cut(s) 22, 964
Bse1I ACTGG 1 cut(s) 582
Bse3DI GCAATG 3 cut(s) 501, 552, 1836
Bse8I GATNNNNATC 3 cut(s) 32, 524, 1767
BseBI CCWGG 6 cut(s) 182, 303, 1264, 1326, 1340, 1853
BseCI ATCGAT 1 cut(s) 1458
BseDI CCNNGG 5 cut(s) 40, 1218, 1262, 1421, 1852
BseGI GGATG 4 cut(s) 496, 732, 842, 1687
BseJI GATNNNNATC 3 cut(s) 32, 524, 1767
BseLI CCNNNNNNNGG 9 cut(s) 29, 320, 883, 918, 1018, 1755, 1874, 1907, 1910
BseMI GCAATG 3 cut(s) 501, 552, 1836
BseMII CTCAG 6 cut(s) 485, 866, 971, 1448, 1479, 1575
BseNI ACTGG 1 cut(s) 582
BseRI GAGGAG 4 cut(s) 356, 720, 1200, 1622
BseXI GCAGC 6 cut(s) 85, 368, 532, 560, 1135, 1849
BseYI CCCAGC 3 cut(s) 296, 494, 1384
BsgI GTGCAG 2 cut(s) 1163, 1202
Bsh1285I CGRYCG 2 cut(s) 30, 82
BshFI GGCC 5 cut(s) 5, 280, 301, 510, 1748
BshNI GGYRCC 1 cut(s) 44
BshVI ATCGAT 1 cut(s) 1458
BsiEI CGRYCG 2 cut(s) 30, 82
BsiHKAI GWGCWC 3 cut(s) 796, 1614, 1815
BsiHKCI CYCGRG 1 cut(s) 1814
BsiSI CCGG 5 cut(s) 6, 23, 115, 965, 1112
BslFI GGGAC 1 cut(s) 33
BslI CCNNNNNNNGG 9 cut(s) 29, 320, 883, 918, 1018, 1755, 1874, 1907, 1910
BsmAI GTCTC 1 cut(s) 643
BsmFI GGGAC 1 cut(s) 33
BsmI GAATGC 4 cut(s) 439, 1407, 1470, 1642
BsnI GGCC 5 cut(s) 5, 280, 301, 510, 1748
BsoBI CYCGRG 1 cut(s) 1814
Bsp1286I GDGCHC 3 cut(s) 796, 1614, 1815
BspACI CCGC 5 cut(s) 171, 223, 1137, 1357, 1881
BspANI GGCC 5 cut(s) 5, 280, 301, 510, 1748
BspCNI CTCAG 6 cut(s) 484, 865, 972, 1447, 1480, 1576
BspDI ATCGAT 1 cut(s) 1458
BspLI GGNNCC 5 cut(s) 21, 46, 113, 963, 1135
BspMAI CTGCAG 1 cut(s) 550
BspOI GCTAGC 1 cut(s) 1778
BspPI GGATC 2 cut(s) 948, 1330
BspQI GCTCTTC 1 cut(s) 921
BspT107I GGYRCC 1 cut(s) 44
BsrBI CCGCTC 1 cut(s) 1357
BsrDI GCAATG 3 cut(s) 501, 552, 1836
BsrFI RCCGGY 2 cut(s) 22, 964
BsrI ACTGG 1 cut(s) 582
BssAI RCCGGY 2 cut(s) 22, 964
BssECI CCNNGG 5 cut(s) 40, 1218, 1262, 1421, 1852
BssNI GRCGYC 1 cut(s) 122
BssSI CACGAG 1 cut(s) 1368
BssT1I CCWWGG 2 cut(s) 1218, 1421
Bst2BI CACGAG 1 cut(s) 1368
Bst2UI CCWGG 6 cut(s) 182, 303, 1264, 1326, 1340, 1853
Bst6I CTCTTC 1 cut(s) 921
BstACI GRCGYC 1 cut(s) 122
BstAPI GCANNNNNTGC 1 cut(s) 554
BstC8I GCNNGC 5 cut(s) 453, 480, 508, 1146, 1776
BstDEI CTNAG 9 cut(s) 471, 797, 852, 980, 1157, 1434, 1488, 1584, 1632
BstENI CCTNNNNNAGG 1 cut(s) 881
BstF5I GGATG 4 cut(s) 496, 732, 842, 1687
BstMAI GTCTC 1 cut(s) 643
BstMCI CGRYCG 2 cut(s) 30, 82
BstMWI GCNNNNNNNGC 4 cut(s) 554, 1133, 1145, 1637
BstNI CCWGG 6 cut(s) 182, 303, 1264, 1326, 1340, 1853
BstSCI CCNGG 7 cut(s) 180, 301, 1110, 1262, 1324, 1338, 1851
BstSFI CTRYAG 2 cut(s) 540, 546
BstV1I GCAGC 6 cut(s) 85, 368, 532, 560, 1135, 1849
BstX2I RGATCY 1 cut(s) 940
BstYI RGATCY 1 cut(s) 940
Bsu15I ATCGAT 1 cut(s) 1458
BsuRI GGCC 5 cut(s) 5, 280, 301, 510, 1748
BsuTUI ATCGAT 1 cut(s) 1458
BtsCI GGATG 4 cut(s) 496, 732, 842, 1687
BtsI GCAGTG 2 cut(s) 291, 846
BtsIMutI CAGTG 7 cut(s) 141, 252, 291, 589, 784, 846, 1760
Cac8I GCNNGC 5 cut(s) 453, 480, 508, 1146, 1776
CaiI CAGNNNCTG 1 cut(s) 1784
Cfr10I RCCGGY 2 cut(s) 22, 964
Cfr13I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1925
ClaI ATCGAT 1 cut(s) 1458
CseI GACGC 2 cut(s) 49, 130
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 4 cut(s) 627, 1005, 1591, 1849
CviAII CATG 7 cut(s) 190, 268, 316, 937, 1013, 1663, 1873
CviQI GTAC 4 cut(s) 627, 1005, 1591, 1849
DdeI CTNAG 9 cut(s) 471, 797, 852, 980, 1157, 1434, 1488, 1584, 1632
DrdI GACNNNNNNGTC 2 cut(s) 124, 1213
DseDI GACNNNNNNGTC 2 cut(s) 124, 1213
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 921
EarI CTCTTC 1 cut(s) 921
Ecl136II GAGCTC 2 cut(s) 794, 1813
Eco130I CCWWGG 2 cut(s) 1218, 1421
Eco24I GRGCYC 2 cut(s) 796, 1815
Eco47I GGWCC 4 cut(s) 20, 1021, 1186, 1925
Eco53kI GAGCTC 2 cut(s) 794, 1813
Eco88I CYCGRG 1 cut(s) 1814
EcoICRI GAGCTC 2 cut(s) 794, 1813
EcoNI CCTNNNNNAGG 1 cut(s) 881
EcoO109I RGGNCCY 1 cut(s) 1186
EcoRI GAATTC 1 cut(s) 1790
EcoRII CCWGG 6 cut(s) 180, 301, 1262, 1324, 1338, 1851
EcoT14I CCWWGG 2 cut(s) 1218, 1421
EcoT38I GRGCYC 2 cut(s) 796, 1815
ErhI CCWWGG 2 cut(s) 1218, 1421
FaeI CATG 7 cut(s) 193, 271, 319, 940, 1016, 1666, 1876
FaqI GGGAC 1 cut(s) 33
FatI CATG 7 cut(s) 189, 267, 315, 936, 1012, 1662, 1872
FauNDI CATATG 1 cut(s) 559
FbaI TGATCA 1 cut(s) 1741
FblI GTMKAC 1 cut(s) 1944
Fnu4HI GCNGC 8 cut(s) 74, 171, 357, 546, 549, 1137, 1149, 1863
FokI GGATG 4 cut(s) 503, 739, 829, 1694
FriOI GRGCYC 2 cut(s) 796, 1815
Fsp4HI GCNGC 8 cut(s) 74, 171, 357, 546, 549, 1137, 1149, 1863
FspBI CTAG 4 cut(s) 918, 1041, 1422, 1775
GluI GCNGC 8 cut(s) 74, 171, 357, 546, 549, 1137, 1149, 1863
GsaI CCCAGC 3 cut(s) 300, 498, 1388
GsuI CTGGAG 3 cut(s) 708, 1257, 1398
HaeIII GGCC 5 cut(s) 5, 280, 301, 510, 1748
HapII CCGG 5 cut(s) 6, 23, 115, 965, 1112
HgaI GACGC 2 cut(s) 49, 130
Hin1I GRCGYC 1 cut(s) 122
Hin1II CATG 7 cut(s) 193, 271, 319, 940, 1016, 1666, 1876
HincII GTYRAC 1 cut(s) 1945
HindII GTYRAC 1 cut(s) 1945
HpaII CCGG 5 cut(s) 6, 23, 115, 965, 1112
HphI GGTGA 7 cut(s) 176, 275, 317, 685, 742, 1175, 1364
Hpy166II GTNNAC 3 cut(s) 141, 733, 1945
Hpy188I TCNGA 8 cut(s) 32, 65, 474, 855, 981, 1315, 1437, 1714
Hpy8I GTNNAC 3 cut(s) 141, 733, 1945
Hpy99I CGWCG 2 cut(s) 65, 124
HpyF10VI GCNNNNNNNGC 4 cut(s) 554, 1133, 1145, 1637
HpyF3I CTNAG 9 cut(s) 471, 797, 852, 980, 1157, 1434, 1488, 1584, 1632
Hsp92I GRCGYC 1 cut(s) 122
Hsp92II CATG 7 cut(s) 193, 271, 319, 940, 1016, 1666, 1876
Ksp22I TGATCA 1 cut(s) 1741
LguI GCTCTTC 1 cut(s) 921
LmnI GCTCC 6 cut(s) 961, 1133, 1423, 1609, 1810, 1870
Lsp1109I GCAGC 6 cut(s) 85, 368, 532, 560, 1135, 1849
LweI GCATC 7 cut(s) 157, 205, 481, 510, 976, 1450, 1723
MabI ACCWGGT 1 cut(s) 180
MaeI CTAG 4 cut(s) 918, 1041, 1422, 1775
MaeIII GTNAC 8 cut(s) 245, 263, 289, 305, 325, 442, 1204, 1370
MbiI CCGCTC 1 cut(s) 1357
MfeI CAATTG 1 cut(s) 1737
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 3 cut(s) 796, 1614, 1815
MluCI AATT 6 cut(s) 1378, 1391, 1560, 1648, 1737, 1790
MlyI GAGTC 7 cut(s) 242, 461, 829, 866, 1201, 1360, 1828
MmeI TCCRAC 4 cut(s) 43, 568, 1081, 1304
MseI TTAA 4 cut(s) 387, 513, 933, 1107
MslI CAYNNNNRTG 2 cut(s) 81, 389
MspA1I CMGCKG 3 cut(s) 545, 1139, 1235
MspI CCGG 5 cut(s) 6, 23, 115, 965, 1112
MspR9I CCNGG 7 cut(s) 182, 303, 1112, 1264, 1326, 1340, 1853
MunI CAATTG 1 cut(s) 1737
Mva1269I GAATGC 4 cut(s) 439, 1407, 1470, 1642
MvaI CCWGG 6 cut(s) 182, 303, 1264, 1326, 1340, 1853
MwoI GCNNNNNNNGC 4 cut(s) 554, 1133, 1145, 1637
NciI CCSGG 1 cut(s) 1112
NdeI CATATG 1 cut(s) 559
NheI GCTAGC 1 cut(s) 1774
NlaIII CATG 7 cut(s) 193, 271, 319, 940, 1016, 1666, 1876
NlaIV GGNNCC 5 cut(s) 21, 46, 113, 963, 1135
NmeAIII GCCGAG 1 cut(s) 21
NmuCI GTSAC 7 cut(s) 245, 263, 289, 305, 442, 1204, 1370
OliI CACNNNNGTG 1 cut(s) 81
PaeR7I CTCGAG 1 cut(s) 1814
PciSI GCTCTTC 1 cut(s) 921
PctI GAATGC 4 cut(s) 439, 1407, 1470, 1642
PfeI GAWTC 4 cut(s) 33, 525, 1045, 1258
PflFI GACNNNGTC 1 cut(s) 124
PflMI CCANNNNNTGG 2 cut(s) 1018, 1755
PkrI GCNGC 8 cut(s) 75, 172, 358, 547, 550, 1138, 1150, 1864
Ple19I CGATCG 1 cut(s) 30
PleI GAGTC 7 cut(s) 242, 461, 829, 866, 1201, 1360, 1827
PpsI GAGTC 7 cut(s) 242, 461, 829, 866, 1201, 1360, 1827
PpuMI RGGWCCY 1 cut(s) 1186
Psp124BI GAGCTC 2 cut(s) 796, 1815
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 6 cut(s) 180, 301, 1262, 1324, 1338, 1851
PspFI CCCAGC 3 cut(s) 296, 494, 1384
PspGI CCWGG 6 cut(s) 180, 301, 1262, 1324, 1338, 1851
PspN4I GGNNCC 5 cut(s) 21, 46, 113, 963, 1135
PspPI GGNCC 5 cut(s) 20, 299, 1021, 1186, 1925
PspPPI RGGWCCY 1 cut(s) 1186
PstI CTGCAG 1 cut(s) 550
PstNI CAGNNNCTG 1 cut(s) 1784
PsuI RGATCY 1 cut(s) 940
PsyI GACNNNGTC 1 cut(s) 124
PvuI CGATCG 1 cut(s) 30
PvuII CAGCTG 2 cut(s) 545, 1235
RsaI GTAC 4 cut(s) 628, 1006, 1592, 1850
RsaNI GTAC 4 cut(s) 627, 1005, 1591, 1849
RseI CAYNNNNRTG 2 cut(s) 81, 389
SacI GAGCTC 2 cut(s) 796, 1815
SalI GTCGAC 1 cut(s) 1943
SapI GCTCTTC 1 cut(s) 921
SaqAI TTAA 4 cut(s) 387, 513, 933, 1107
SatI GCNGC 8 cut(s) 74, 171, 357, 546, 549, 1137, 1149, 1863
Sau96I GGNCC 5 cut(s) 20, 299, 1021, 1186, 1925
ScaI AGTACT 1 cut(s) 1006
SchI GAGTC 7 cut(s) 242, 461, 829, 866, 1201, 1360, 1828
ScrFI CCNGG 7 cut(s) 182, 303, 1112, 1264, 1326, 1340, 1853
SduI GDGCHC 3 cut(s) 796, 1614, 1815
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 7 cut(s) 157, 205, 481, 510, 976, 1450, 1723
SfcI CTRYAG 2 cut(s) 540, 546
Sfr274I CTCGAG 1 cut(s) 1814
SinI GGWCC 4 cut(s) 20, 1021, 1186, 1925
SlaI CTCGAG 1 cut(s) 1814
SmiMI CAYNNNNRTG 2 cut(s) 81, 389
SmlI CTYRAG 2 cut(s) 1643, 1814
SmoI CTYRAG 2 cut(s) 1643, 1814
Sse9I AATT 6 cut(s) 1378, 1391, 1560, 1648, 1737, 1790
SsiI CCGC 5 cut(s) 171, 223, 1137, 1357, 1881
SspMI CTAG 4 cut(s) 918, 1041, 1422, 1775
SstI GAGCTC 2 cut(s) 796, 1815
StyD4I CCNGG 7 cut(s) 180, 301, 1110, 1262, 1324, 1338, 1851
StyI CCWWGG 2 cut(s) 1218, 1421
TasI AATT 6 cut(s) 1378, 1391, 1560, 1648, 1737, 1790
TatI WGTACW 2 cut(s) 1004, 1590
TauI GCSGC 2 cut(s) 173, 1139
TfiI GAWTC 4 cut(s) 33, 525, 1045, 1258
Tru1I TTAA 4 cut(s) 387, 513, 933, 1107
Tru9I TTAA 4 cut(s) 387, 513, 933, 1107
TscAI CASTG 7 cut(s) 148, 259, 298, 589, 784, 853, 1760
TseFI GTSAC 7 cut(s) 245, 263, 289, 305, 442, 1204, 1370
TseI GCWGC 6 cut(s) 73, 356, 545, 548, 1148, 1862
Tsp45I GTSAC 7 cut(s) 245, 263, 289, 305, 442, 1204, 1370
TspDTI ATGAA 4 cut(s) 206, 284, 1803, 1820
TspRI CASTG 7 cut(s) 148, 259, 298, 589, 784, 853, 1760
Tth111I GACNNNGTC 1 cut(s) 124
Van91I CCANNNNNTGG 2 cut(s) 1018, 1755
VpaK11BI GGWCC 4 cut(s) 20, 1021, 1186, 1925
XagI CCTNNNNNAGG 1 cut(s) 881
XapI RAATTY 2 cut(s) 1391, 1790
XhoI CTCGAG 1 cut(s) 1814
XmaJI CCTAGG 1 cut(s) 1421
XmiI GTMKAC 1 cut(s) 1944
XspI CTAG 4 cut(s) 918, 1041, 1422, 1775
ZrmI AGTACT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.