Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000954.1

Orthogroup ID

OG0005923

Physical Location & Seq

Genomic Coordinates Reverse (-)

15197 .. 24485

Gene Structure 9289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000954.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2694 bp

atgtacgtgtttggattgatatggggttttcatagattggagataattaacaaggggcattgtaaatctgctccggaatatgtcttgagcgttatggacaccattctcttgtctataagtgtgtatatcaacagttctgtgttccttaagcaaaagcagacctcgcttaaggcagcctgtaattccacagaggaaacagtggttcatcctctcccgacattgttccagttgcttggcctaactcctttccagaaggacagttctgggctttgtgcctcaattgtacatgcaaataagcataaaaatcctactagaaatgaagatgaagttgaaaacaaggaatgtatttcggatgctgaggttgataacatcgttggggttggagatagctctgagttagaggaaatggatcttcctgctgcacttctgtgtgaatttcatccgtaccaaaagcaggctcttcattggatgatccaactagaaaagggaaaatgcatggatgagggagcaatgactcttcagtcttcacccttgctgggaggcatatcgtcttgcagacaaatcctagctgatgctgtgggcctggggaagatgattatgacaatagcactccttgttgctcatgcaggacatgaatcatcaggtagtcaacctatgagccggtcctccgctgaagatattgaagccagtgacatgcatgtcagaccattcatcaaaactcccaaaggcgctaggtggaataaactcatccagaaaccctttgaggagggtgatgagagaggattaaagcttgttcaatctatcttgaagacgattatgttcaggagaaccaagtttagcactgatcgtgaaggcaggccaattttagtccttcctcctgctgatattcagatggtttactgtgagctgcaaaagacttttattaggccctttgtaaaagatcaaggtatatcaaaatattgcctggcttatggtgggttgtttgctggtctgaattgggtttggaatagcgctgtgatatttcagccggaactgggtgagatgaagtttgatggaatatcgattccatatgatagctttgatgggtttgggatcaatgatggaggttttgtattggacgacaatgtggaggaggttctgggttttggccatgtggtgaacttggatgttagttatggagctaaggaactgctggttggaactatggaaaggccggaatatagcataaagaattttgatagtgaagggggtgctccacatgatgctatgttttatgcgttgggttatcttggtgttcaggatcttttttcggttgaatgggtctgcaggtctttgaatcatgcagtcaaaaatgacccccttttatggaggagcatgcacattgattggccattgaatgagaggatcaccgatgatgctcttgtaaatttaactagcagggctcaaagtaatcttcaaaccttaagtctagtgcaatgtgcatggatcaccgatattgggctgcatcgtgtgtttgacagcaatccaaggtcgacaaaattaagtattccaggatgtataaaaataagtgttcagagcatcttgttaaacctaaggaccttgaagtctgcaggaaaacctggaataaagcagttaagaattggaggtctctctggtataacagacaagcagttcgaagagttaaaattcttgcttggtgcagataaccatatccaggttaaagccccaaaaccacggtattttcatggtgggctattgtatctctcttgtgatgatgattgcgccatcgacattgaagcatgccccaggtgccagagactaagtttagtttatgattgcccagcagagagttgccaagggaaacatcagaagtctcagatgtgcagggcttgcatactatgtataactcgctgtattagctgtgggtgctgcctcggagactgcgattatgtcgagacgttttgcttacagttgctttgtttggaatgtttggagaacctactcaactgtcaagagaggcatggagaaaaaggtgctaccaaatgtgccatattttgtcaggagagcagtttcatcctgccactaggaggttgcgaccatttggcaaagcaaggaactcgctgccttcctagggaaaatcaggcacacaaggtgtgcagtccgggacggagtccacgtcgccctaccacaataggtcatcccaccagattaggcccagcagccaagggcaggcccaagagcccagaaaccaagcaaatgagtgcaactgacttcgccgatcggatcgtcttggatctggattccaacccaaaacctgatccgaaacaggatcgatcaccacagcctccatcagactctctcaaccccaaaacaggggaaaccgcaacggcaatccgcctctgccgcgcaccagaaccccttcgccgcaccgcccttgctcaaaacctccacaacgcagatcggaaaccaacaaggaggaccccttctggttgttgttccctctccggacgagacccgatcattcccagccccctgctccatccccagaacccctgtccctcaccggtgagcgcacagagccagttcgcctgttcgacgacaacgtcccatagacgcgctgccaaacacggcattgacaatttcctagggttttcgcactccaatgttaccaacataggaatgaaaagttcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box-like

Protein Analysis

897

Amino Acids

99.0

Weight (kDa)

7.09

Isoelectric Point (pI)

54.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005923)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g52710 FvH4_6g52710 FvH4_6g52710
malus_domestica	MD09G1017100.v1.1 MD17G1017800.v1.1
prunus_persica	Prupe.3G300300_v2.0.a1 Prupe.3G300300_v2.0.a1 Prupe.3G300300_v2.0.a1
pyrus_communis	pycom111g01390 pycom17g01420 pycom17g01430
rosa_chinensis	RchiOBHm_Chr2g0174221 RchiOBHm_Chr2g0174321
rosa_laevigata	RLG00000022257
rosa_multiflora	Rmu_sc0000954.1_g000005 Rmu_sc0000954.1_g000009 Rmu_sc0007150.1_g000009 Rmu_sc0015388.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078320
rosa_rugosa	Rorug02G0576100
rosa_samantha	Rh2AG655700 Rh2AG655900 Rh2BG666900 Rh2BG667100 Rh2CG630800 Rh2DG681300 Rh2DG681600
rosa_wichuraiana	Rw2G053800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	520, 698, 1603, 2602
Acc36I	ACCTGC	1 cut(s)	1317
AccB1I	GGYRCC	1 cut(s)	1809
AccI	GTMKAC	1 cut(s)	1532
AccII	CGCG	2 cut(s)	2406, 2616
AccIII	TCCGGA	2 cut(s)	73, 2504
AciI	CCGC	6 cut(s)	669, 2382, 2395, 2404, 2425, 2430
AcoI	YGGCCR	2 cut(s)	1147, 1388
AcsI	RAATTY	4 cut(s)	434, 1231, 1426, 1685
AcuI	CTGAAG	2 cut(s)	503, 693
AdeI	CACNNNGTG	1 cut(s)	2152
AfaI	GTAC	3 cut(s)	5, 285, 446
AfeI	AGCGCT	1 cut(s)	1012
AflII	CTTAAG	3 cut(s)	146, 167, 1462
AflIII	ACRYGT	1 cut(s)	6
AgeI	ACCGGT	1 cut(s)	2563
AjiI	CACGTC	1 cut(s)	2177
AjnI	CCWGG	6 cut(s)	582, 963, 1549, 1618, 1713, 1805
AjuI	GAANNNNNNNTTGG	2 cut(s)	1179, 1211
AleI	CACNNNNGTG	1 cut(s)	427
AluBI	AGCT	7 cut(s)	390, 569, 790, 907, 1077, 1181, 1920
AluI	AGCT	7 cut(s)	390, 569, 790, 907, 1077, 1181, 1920
Alw21I	GWGCWC	1 cut(s)	1255
Alw26I	GTCTC	6 cut(s)	1652, 1810, 1878, 1932, 1949, 2505
Aor13HI	TCCGGA	2 cut(s)	73, 2504
Aor51HI	AGCGCT	1 cut(s)	1012
AoxI	GGCC	9 cut(s)	235, 580, 857, 926, 1147, 1211, 1388, 2212, 2231
ApeKI	GCWGC	8 cut(s)	173, 419, 907, 1501, 1929, 2121, 2219, 2618
ApoI	RAATTY	4 cut(s)	434, 1231, 1426, 1685
ArsI	GACNNNNNNTTYG	4 cut(s)	1450, 1482, 1655, 1687
AsiGI	ACCGGT	1 cut(s)	2563
Asp700I	GAANNNNTTC	1 cut(s)	2418
AspA2I	CCTAGG	2 cut(s)	2129, 2644
AspLEI	GCGC	6 cut(s)	731, 1013, 1784, 2408, 2573, 2618
AspS9I	GGNCC	7 cut(s)	580, 663, 927, 1596, 2213, 2232, 2478
AsuC2I	CCSGG	1 cut(s)	2163
AsuHPI	GGTGA	9 cut(s)	519, 782, 1049, 1168, 1399, 1480, 2328, 2553, 2578
AsuII	TTCGAA	1 cut(s)	1674
AvaII	GGWCC	3 cut(s)	663, 1596, 2478
AvrII	CCTAGG	2 cut(s)	2129, 2644
AxyI	CCTNAGG	1 cut(s)	1592
BalI	TGGCCA	2 cut(s)	1149, 1390
BanI	GGYRCC	1 cut(s)	1809
BanII	GRGCYC	2 cut(s)	1444, 2243
BbsI	GAAGAC	2 cut(s)	516, 815
Bbv12I	GWGCWC	1 cut(s)	1255
BbvCI	CCTCAGC	1 cut(s)	357
BbvI	GCAGC	8 cut(s)	185, 406, 894, 1488, 1916, 2108, 2231, 2605
BccI	CCATC	7 cut(s)	886, 1046, 1076, 1094, 1793, 2356, 2547
BceAI	ACGGC	2 cut(s)	2403, 2644
BcgI	CGANNNNNNTGC	2 cut(s)	2099, 2133
BciT130I	CCWGG	6 cut(s)	584, 965, 1551, 1620, 1715, 1807
BcnI	CCSGG	1 cut(s)	2163
BcoDI	GTCTC	6 cut(s)	1652, 1810, 1878, 1932, 1949, 2505
BfaI	CTAG	9 cut(s)	312, 479, 566, 732, 1434, 1469, 2084, 2130, 2645
BfmI	CTRYAG	2 cut(s)	1324, 1608
BfoI	RGCGCY	2 cut(s)	732, 1014
BfrI	CTTAAG	3 cut(s)	146, 167, 1462
BfuAI	ACCTGC	1 cut(s)	1317
BlnI	CCTAGG	2 cut(s)	2129, 2644
Bme1390I	CCNGG	7 cut(s)	584, 965, 1551, 1620, 1715, 1807, 2163
Bme18I	GGWCC	3 cut(s)	663, 1596, 2478
BmgBI	CACGTC	1 cut(s)	2177
BmgT120I	GGNCC	7 cut(s)	580, 663, 927, 1596, 2213, 2232, 2478
BmiI	GGNNCC	2 cut(s)	1811, 2480
BmrFI	CCNGG	7 cut(s)	584, 965, 1551, 1620, 1715, 1807, 2163
BmrI	ACTGGG	1 cut(s)	1043
BmsI	GCATC	6 cut(s)	343, 562, 1252, 1405, 1513, 1587
BmuI	ACTGGG	1 cut(s)	1043
BpiI	GAAGAC	2 cut(s)	516, 815
Bpu10I	CCTNAGC	2 cut(s)	357, 1182
Bpu14I	TTCGAA	1 cut(s)	1674
BpuEI	CTTGAG	1 cut(s)	106
BpuMI	CCSGG	1 cut(s)	2163
Bsa29I	ATCGAT	2 cut(s)	1061, 2332
BsaAI	YACGTR	1 cut(s)	7
BsaI	GGTCTC	2 cut(s)	1652, 2505
BsaJI	CCNNGG	9 cut(s)	583, 1526, 1733, 1805, 1855, 1933, 2129, 2223, 2644
BsaWI	WCCGGW	3 cut(s)	73, 2504, 2563
BsaXI	ACNNNNNCTCC	4 cut(s)	1095, 1125, 2161, 2191
Bse118I	RCCGGY	2 cut(s)	660, 2563
Bse1I	ACTGG	4 cut(s)	226, 687, 1038, 2581
Bse21I	CCTNAGG	1 cut(s)	1592
Bse3DI	GCAATG	2 cut(s)	516, 1481
BseAI	TCCGGA	2 cut(s)	73, 2504
BseBI	CCWGG	6 cut(s)	584, 965, 1551, 1620, 1715, 1807
BseCI	ATCGAT	2 cut(s)	1061, 2332
BseDI	CCNNGG	9 cut(s)	583, 1526, 1733, 1805, 1855, 1933, 2129, 2223, 2644
BseMI	GCAATG	2 cut(s)	516, 1481
BseMII	CTCAG	3 cut(s)	348, 384, 1889
BseNI	ACTGG	4 cut(s)	226, 687, 1038, 2581
BseRI	GAGGAG	3 cut(s)	779, 1145, 1384
BseXI	GCAGC	8 cut(s)	185, 406, 894, 1488, 1916, 2108, 2231, 2605
BseYI	CCCAGC	4 cut(s)	535, 1840, 2215, 2525
BsgI	GTGCAG	4 cut(s)	405, 1719, 1903, 2176
Bsh1236I	CGCG	2 cut(s)	2406, 2616
Bsh1285I	CGRYCG	1 cut(s)	2281
BshFI	GGCC	9 cut(s)	237, 582, 859, 928, 1149, 1213, 1390, 2214, 2233
BshNI	GGYRCC	1 cut(s)	1809
BshTI	ACCGGT	1 cut(s)	2563
BshVI	ATCGAT	2 cut(s)	1061, 2332
BsiEI	CGRYCG	1 cut(s)	2281
BsiHKAI	GWGCWC	1 cut(s)	1255
BsiSI	CCGG	7 cut(s)	74, 661, 1028, 1214, 2162, 2505, 2564
BslFI	GGGAC	3 cut(s)	2178, 2541, 2590
BsmAI	GTCTC	6 cut(s)	1652, 1810, 1878, 1932, 1949, 2505
BsmBI	CGTCTC	1 cut(s)	1949
BsmFI	GGGAC	3 cut(s)	2178, 2541, 2590
BsnI	GGCC	9 cut(s)	237, 582, 859, 928, 1149, 1213, 1390, 2214, 2233
Bso31I	GGTCTC	2 cut(s)	1652, 2505
Bsp119I	TTCGAA	1 cut(s)	1674
Bsp1286I	GDGCHC	3 cut(s)	1255, 1444, 2243
Bsp13I	TCCGGA	2 cut(s)	73, 2504
Bsp1407I	TGTACA	1 cut(s)	283
BspACI	CCGC	6 cut(s)	669, 2382, 2395, 2404, 2425, 2430
BspANI	GGCC	9 cut(s)	237, 582, 859, 928, 1149, 1213, 1390, 2214, 2233
BspCNI	CTCAG	3 cut(s)	349, 385, 1888
BspDI	ATCGAT	2 cut(s)	1061, 2332
BspEI	TCCGGA	2 cut(s)	73, 2504
BspFNI	CGCG	2 cut(s)	2406, 2616
BspLI	GGNNCC	2 cut(s)	1811, 2480
BspMAI	CTGCAG	2 cut(s)	1328, 1612
BspMI	ACCTGC	1 cut(s)	1317
BspQI	GCTCTTC	1 cut(s)	465
BspT104I	TTCGAA	1 cut(s)	1674
BspT107I	GGYRCC	1 cut(s)	1809
BspTI	CTTAAG	3 cut(s)	146, 167, 1462
BspTNI	GGTCTC	2 cut(s)	1652, 2505
BsrDI	GCAATG	2 cut(s)	516, 1481
BsrFI	RCCGGY	2 cut(s)	660, 2563
BsrGI	TGTACA	1 cut(s)	283
BsrI	ACTGG	4 cut(s)	226, 687, 1038, 2581
BssAI	RCCGGY	2 cut(s)	660, 2563
BssECI	CCNNGG	9 cut(s)	583, 1526, 1733, 1805, 1855, 1933, 2129, 2223, 2644
BssT1I	CCWWGG	5 cut(s)	1526, 1855, 2129, 2223, 2644
Bst2UI	CCWGG	6 cut(s)	584, 965, 1551, 1620, 1715, 1807
Bst4CI	ACNGT	7 cut(s)	134, 199, 260, 902, 1737, 1971, 2009
Bst6I	CTCTTC	3 cut(s)	465, 522, 1671
BstAFI	CTTAAG	3 cut(s)	146, 167, 1462
BstAPI	GCANNNNNTGC	1 cut(s)	1890
BstAUI	TGTACA	1 cut(s)	283
BstBAI	YACGTR	1 cut(s)	7
BstBI	TTCGAA	1 cut(s)	1674
BstC8I	GCNNGC	6 cut(s)	456, 857, 1376, 1801, 1891, 2231
BstDEI	CTNAG	6 cut(s)	357, 393, 1182, 1592, 1820, 1875
BstDSI	CCRYGG	1 cut(s)	1733
BstFNI	CGCG	2 cut(s)	2406, 2616
BstH2I	RGCGCY	2 cut(s)	732, 1014
BstHHI	GCGC	6 cut(s)	731, 1013, 1784, 2408, 2573, 2618
BstMAI	GTCTC	6 cut(s)	1652, 1810, 1878, 1932, 1949, 2505
BstMCI	CGRYCG	1 cut(s)	2281
BstMWI	GCNNNNNNNGC	7 cut(s)	163, 1809, 1890, 1917, 1926, 2403, 2577
BstNI	CCWGG	6 cut(s)	584, 965, 1551, 1620, 1715, 1807
BstNSI	RCATGY	5 cut(s)	290, 697, 701, 1378, 1803
BstSCI	CCNGG	7 cut(s)	582, 963, 1549, 1618, 1713, 1805, 2161
BstSFI	CTRYAG	2 cut(s)	1324, 1608
BstUI	CGCG	2 cut(s)	2406, 2616
BstV1I	GCAGC	8 cut(s)	185, 406, 894, 1488, 1916, 2108, 2231, 2605
BstV2I	GAAGAC	2 cut(s)	516, 815
BstX2I	RGATCY	3 cut(s)	409, 1300, 2293
BstXI	CCANNNNNNTGG	1 cut(s)	233
BstYI	RGATCY	3 cut(s)	409, 1300, 2293
Bsu15I	ATCGAT	2 cut(s)	1061, 2332
Bsu36I	CCTNAGG	1 cut(s)	1592
BsuRI	GGCC	9 cut(s)	237, 582, 859, 928, 1149, 1213, 1390, 2214, 2233
BsuTUI	ATCGAT	2 cut(s)	1061, 2332
BtgI	CCRYGG	1 cut(s)	1733
BtrI	CACGTC	1 cut(s)	2177
BtsIMutI	CAGTG	3 cut(s)	204, 694, 840
BveI	ACCTGC	1 cut(s)	1317
Cac8I	GCNNGC	6 cut(s)	456, 857, 1376, 1801, 1891, 2231
CfoI	GCGC	6 cut(s)	731, 1013, 1784, 2408, 2573, 2618
Cfr10I	RCCGGY	2 cut(s)	660, 2563
Cfr13I	GGNCC	7 cut(s)	580, 663, 927, 1596, 2213, 2232, 2478
ClaI	ATCGAT	2 cut(s)	1061, 2332
CseI	GACGC	1 cut(s)	2622
Csp6I	GTAC	3 cut(s)	4, 284, 445
CspAI	ACCGGT	1 cut(s)	2563
CviQI	GTAC	3 cut(s)	4, 284, 445
DdeI	CTNAG	6 cut(s)	357, 393, 1182, 1592, 1820, 1875
DraIII	CACNNNGTG	1 cut(s)	2152
DrdI	GACNNNNNNGTC	4 cut(s)	520, 698, 1603, 2602
DseDI	GACNNNNNNGTC	4 cut(s)	520, 698, 1603, 2602
EaeI	YGGCCR	2 cut(s)	1147, 1388
Eam1104I	CTCTTC	3 cut(s)	465, 522, 1671
EarI	CTCTTC	3 cut(s)	465, 522, 1671
EciI	GGCGGA	1 cut(s)	2384
Eco130I	CCWWGG	5 cut(s)	1526, 1855, 2129, 2223, 2644
Eco24I	GRGCYC	2 cut(s)	1444, 2243
Eco31I	GGTCTC	2 cut(s)	1652, 2505
Eco47I	GGWCC	3 cut(s)	663, 1596, 2478
Eco47III	AGCGCT	1 cut(s)	1012
Eco57I	CTGAAG	2 cut(s)	503, 693
Eco81I	CCTNAGG	1 cut(s)	1592
EcoO109I	RGGNCCY	3 cut(s)	927, 1596, 2478
EcoRII	CCWGG	6 cut(s)	582, 963, 1549, 1618, 1713, 1805
EcoT14I	CCWWGG	5 cut(s)	1526, 1855, 2129, 2223, 2644
EcoT22I	ATGCAT	2 cut(s)	497, 699
EcoT38I	GRGCYC	2 cut(s)	1444, 2243
ErhI	CCWWGG	5 cut(s)	1526, 1855, 2129, 2223, 2644
Esp3I	CGTCTC	1 cut(s)	1949
FaqI	GGGAC	3 cut(s)	2178, 2541, 2590
FauNDI	CATATG	1 cut(s)	1069
FblI	GTMKAC	1 cut(s)	1532
FriOI	GRGCYC	2 cut(s)	1444, 2243
FspBI	CTAG	9 cut(s)	312, 479, 566, 732, 1434, 1469, 2084, 2130, 2645
GlaI	GCGC	6 cut(s)	730, 1012, 1783, 2407, 2572, 2617
GsaI	CCCAGC	4 cut(s)	539, 1844, 2219, 2529
HaeII	RGCGCY	2 cut(s)	732, 1014
HaeIII	GGCC	9 cut(s)	237, 582, 859, 928, 1149, 1213, 1390, 2214, 2233
HapII	CCGG	7 cut(s)	74, 661, 1028, 1214, 2162, 2505, 2564
HgaI	GACGC	1 cut(s)	2622
HhaI	GCGC	6 cut(s)	731, 1013, 1784, 2408, 2573, 2618
Hin6I	GCGC	6 cut(s)	729, 1011, 1782, 2406, 2571, 2616
HinP1I	GCGC	6 cut(s)	729, 1011, 1782, 2406, 2571, 2616
HincII	GTYRAC	2 cut(s)	650, 1533
HindII	GTYRAC	2 cut(s)	650, 1533
HindIII	AAGCTT	1 cut(s)	788
HinfI	GANTC	7 cut(s)	514, 635, 1063, 1336, 2170, 2300, 2354
HpaII	CCGG	7 cut(s)	74, 661, 1028, 1214, 2162, 2505, 2564
HphI	GGTGA	9 cut(s)	519, 782, 1049, 1168, 1399, 1480, 2328, 2553, 2578
Hpy166II	GTNNAC	5 cut(s)	650, 898, 1159, 1533, 2174
Hpy8I	GTNNAC	5 cut(s)	650, 898, 1159, 1533, 2174
Hpy99I	CGWCG	2 cut(s)	2181, 2599
HpyAV	CCTTC	7 cut(s)	247, 845, 881, 1238, 2135, 2429, 2493
HpyCH4III	ACNGT	7 cut(s)	134, 199, 260, 902, 1737, 1971, 2009
HpyCH4IV	ACGT	4 cut(s)	6, 1958, 2176, 2603
HpyF10VI	GCNNNNNNNGC	7 cut(s)	163, 1809, 1890, 1917, 1926, 2403, 2577
HpyF3I	CTNAG	6 cut(s)	357, 393, 1182, 1592, 1820, 1875
HpySE526I	ACGT	4 cut(s)	6, 1958, 2176, 2603
HspAI	GCGC	6 cut(s)	729, 1011, 1782, 2406, 2571, 2616
Kpn2I	TCCGGA	2 cut(s)	73, 2504
LguI	GCTCTTC	1 cut(s)	465
LmnI	GCTCC	6 cut(s)	76, 506, 1178, 1258, 1371, 2541
Lsp1109I	GCAGC	8 cut(s)	185, 406, 894, 1488, 1916, 2108, 2231, 2605
LweI	GCATC	6 cut(s)	343, 562, 1252, 1405, 1513, 1587
MaeI	CTAG	9 cut(s)	312, 479, 566, 732, 1434, 1469, 2084, 2130, 2645
MaeII	ACGT	4 cut(s)	6, 1958, 2176, 2603
MaeIII	GTNAC	2 cut(s)	689, 2665
MfeI	CAATTG	1 cut(s)	279
MflI	RGATCY	3 cut(s)	409, 1300, 2293
MhlI	GDGCHC	3 cut(s)	1255, 1444, 2243
MlsI	TGGCCA	2 cut(s)	1149, 1390
MluNI	TGGCCA	2 cut(s)	1149, 1390
MlyI	GAGTC	3 cut(s)	508, 2179, 2348
MmeI	TCCRAC	4 cut(s)	361, 499, 1177, 2328
Mox20I	TGGCCA	2 cut(s)	1149, 1390
Mph1103I	ATGCAT	2 cut(s)	497, 699
MroI	TCCGGA	2 cut(s)	73, 2504
MroXI	GAANNNNTTC	1 cut(s)	2418
MscI	TGGCCA	2 cut(s)	1149, 1390
MslI	CAYNNNNRTG	3 cut(s)	427, 2661, 2678
Msp20I	TGGCCA	2 cut(s)	1149, 1390
MspA1I	CMGCKG	1 cut(s)	671
MspCI	CTTAAG	3 cut(s)	146, 167, 1462
MspI	CCGG	7 cut(s)	74, 661, 1028, 1214, 2162, 2505, 2564
MspR9I	CCNGG	7 cut(s)	584, 965, 1551, 1620, 1715, 1807, 2163
MunI	CAATTG	1 cut(s)	279
MvaI	CCWGG	6 cut(s)	584, 965, 1551, 1620, 1715, 1807
MvnI	CGCG	2 cut(s)	2406, 2616
MwoI	GCNNNNNNNGC	7 cut(s)	163, 1809, 1890, 1917, 1926, 2403, 2577
NciI	CCSGG	1 cut(s)	2163
NdeI	CATATG	1 cut(s)	1069
NlaIV	GGNNCC	2 cut(s)	1811, 2480
NmuCI	GTSAC	1 cut(s)	689
NsiI	ATGCAT	2 cut(s)	497, 699
NspI	RCATGY	5 cut(s)	290, 697, 701, 1378, 1803
NspV	TTCGAA	1 cut(s)	1674
OliI	CACNNNNGTG	1 cut(s)	427
PaeI	GCATGC	2 cut(s)	1378, 1803
PciSI	GCTCTTC	1 cut(s)	465
PcsI	WCGNNNNNNNCGW	3 cut(s)	1941, 2173, 2600
PdmI	GAANNNNTTC	1 cut(s)	2418
PfeI	GAWTC	4 cut(s)	635, 1063, 1336, 2300
PflFI	GACNNNGTC	2 cut(s)	2169, 2602
PfoI	TCCNGGA	2 cut(s)	1549, 2161
PinAI	ACCGGT	1 cut(s)	2563
Ple19I	CGATCG	1 cut(s)	2281
PleI	GAGTC	3 cut(s)	508, 2178, 2348
PpsI	GAGTC	3 cut(s)	508, 2178, 2348
Ppu21I	YACGTR	1 cut(s)	7
PpuMI	RGGWCCY	2 cut(s)	1596, 2478
Psp5II	RGGWCCY	2 cut(s)	1596, 2478
Psp6I	CCWGG	6 cut(s)	582, 963, 1549, 1618, 1713, 1805
PspFI	CCCAGC	4 cut(s)	535, 1840, 2215, 2525
PspGI	CCWGG	6 cut(s)	582, 963, 1549, 1618, 1713, 1805
PspN4I	GGNNCC	2 cut(s)	1811, 2480
PspPI	GGNCC	7 cut(s)	580, 663, 927, 1596, 2213, 2232, 2478
PspPPI	RGGWCCY	2 cut(s)	1596, 2478
PstI	CTGCAG	2 cut(s)	1328, 1612
PsuI	RGATCY	3 cut(s)	409, 1300, 2293
PsyI	GACNNNGTC	2 cut(s)	2169, 2602
PvuI	CGATCG	1 cut(s)	2281
RsaI	GTAC	3 cut(s)	5, 285, 446
RsaNI	GTAC	3 cut(s)	4, 284, 445
RseI	CAYNNNNRTG	3 cut(s)	427, 2661, 2678
SalI	GTCGAC	1 cut(s)	1531
SapI	GCTCTTC	1 cut(s)	465
Sau96I	GGNCC	7 cut(s)	580, 663, 927, 1596, 2213, 2232, 2478
SchI	GAGTC	3 cut(s)	508, 2179, 2348
ScrFI	CCNGG	7 cut(s)	584, 965, 1551, 1620, 1715, 1807, 2163
SduI	GDGCHC	3 cut(s)	1255, 1444, 2243
SfaNI	GCATC	6 cut(s)	343, 562, 1252, 1405, 1513, 1587
SfcI	CTRYAG	2 cut(s)	1324, 1608
SfuI	TTCGAA	1 cut(s)	1674
SgrAI	CRCCGGYG	1 cut(s)	2563
SinI	GGWCC	3 cut(s)	663, 1596, 2478
SmiMI	CAYNNNNRTG	3 cut(s)	427, 2661, 2678
SmlI	CTYRAG	4 cut(s)	85, 146, 167, 1462
SmoI	CTYRAG	4 cut(s)	85, 146, 167, 1462
SphI	GCATGC	2 cut(s)	1378, 1803
SsiI	CCGC	6 cut(s)	669, 2382, 2395, 2404, 2425, 2430
SspI	AATATT	1 cut(s)	959
SspMI	CTAG	9 cut(s)	312, 479, 566, 732, 1434, 1469, 2084, 2130, 2645
StyD4I	CCNGG	7 cut(s)	582, 963, 1549, 1618, 1713, 1805, 2161
StyI	CCWWGG	5 cut(s)	1526, 1855, 2129, 2223, 2644
TaaI	ACNGT	7 cut(s)	134, 199, 260, 902, 1737, 1971, 2009
TaiI	ACGT	4 cut(s)	9, 1961, 2179, 2606
TaqI	TCGA	7 cut(s)	1061, 1532, 1674, 1788, 1953, 2332, 2594
TatI	WGTACW	1 cut(s)	283
TauI	GCSGC	2 cut(s)	2406, 2427
TfiI	GAWTC	4 cut(s)	635, 1063, 1336, 2300
TscAI	CASTG	3 cut(s)	204, 694, 847
TseFI	GTSAC	1 cut(s)	689
TseI	GCWGC	8 cut(s)	173, 419, 907, 1501, 1929, 2121, 2219, 2618
Tsp45I	GTSAC	1 cut(s)	689
TspGWI	ACGGA	2 cut(s)	432, 2182
TspRI	CASTG	3 cut(s)	204, 694, 847
Tth111I	GACNNNGTC	2 cut(s)	2169, 2602
Vha464I	CTTAAG	3 cut(s)	146, 167, 1462
VpaK11BI	GGWCC	3 cut(s)	663, 1596, 2478
XapI	RAATTY	4 cut(s)	434, 1231, 1426, 1685
XceI	RCATGY	5 cut(s)	290, 697, 701, 1378, 1803
XmaJI	CCTAGG	2 cut(s)	2129, 2644
XmiI	GTMKAC	1 cut(s)	1532
XmnI	GAANNNNTTC	1 cut(s)	2418
XspI	CTAG	9 cut(s)	312, 479, 566, 732, 1434, 1469, 2084, 2130, 2645
Zsp2I	ATGCAT	2 cut(s)	497, 699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.