Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007150.1

Orthogroup ID

OG0005923

Physical Location & Seq

Genomic Coordinates Forward (+)

40672 .. 45552

Gene Structure 4881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007150.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

atggctttgaatctgtctcgtggctcagttctgcctaagtatccttccccagagcatagtttatgttcttctgttaggtgttctaatgggtatgtgagggatcaatgtaaagagaagagtttggatggtgatgcatcgagttcaaatgcggagttgaagaagaatacccattacaagggtgaattgggtggctattgtgagccttccgttgatgatattcttgataggttgcctgttgatccttttgggatggatatgaggtctacttttacggcgattagtggttggcttgaggattttgagaaggggtgtgagtcttatgggtttggggtggatgagcagaagaagaaggtagtggatggtgggttgtttgctggtctgaattgggtttggaatagcgctgtgatatttcagccggaactgggtgaggtgaagtttgatggaatatcgattccatatgatagctttgatgggtttgggatcaatgatggaggttttgtattggacgacaatgtggaggagtttctgggttttggccatgtggtgaacttggatgttggttatggagctaaggaactgccggttggaactatggaaaggccagaatgtagcataaagaattttgatagtgaaggcggtgctccacatgatgctatgttttatgcattgggttatctcggcgttcaggatcttctttcagttcaacgggtttgcaggtctttgaatcatgcagtcaaaagtgatcctcttttatggaggagcattaacattgattggccattgaatgagaggatcactgatgatgctcttgtaaatttaactagcagggctcagggtaatcttcaaaccttaagtctagtgcattgtgcatggattaccgatgttgggctgcatcgcgtgtttgacagcaatccaaggctgacaaaattaagtattccaggatgtataaaaataagtgttgagagcatcttgttaaacctaaggaccttgaagtctgcaggcaaacctggaataaagcagttaagaattggaggtctctctggtataacagacaagcagttcgaagagttaaaattcttgctgggtgcagataaccatacccaggttaaagccccaaaaccacggtattttcatggtgggctatcgtacctctcttgtgatgatgattgcgccattgacattgaagcatgccccaggtgccagagactaagtttagtttatgattgcccagcagagagttgccaagggaaatatcagaaggctcagatgtgcagggcttgcatactctgcataactcgctgtattagctgtgggtgttgccttggagactgcgattatgtcaagcagcctggactagagatgtcaactgtccaaagtgaattagacttgtcatatgggcaacgttatcaaggggtgacaatcccagaggcgtatgaacgcctaatccttgatacaataaaaggcgatcaacagcactttgtacgcagagatgagttgaaggcggcctgggaaatcttcacacctcttctgcacagaattgacaacggtgagctaaagccgcttccatacaaaccaggcagtcggggtcctgcagaagcagatgctctgctagagaagatactatgttctgtacttgaaactagcggcggggtcggcggccatctgcgtgtagcgtcggtgacaggcgtgacgggtttcacaggtaggagactgtttgacgggtctggtggcttgcttccgatcttgggatcagtggttaactggttttggtcagagctaaccagcatggtggttgatcaacggcggcggcggttggttggctggccttctcgaggtcggggatcacattttttggcgacgggaattgaggcaattcgatccttgattccggtcggttgtcgcagcttttgggtaggtggttgtcgactggattttgcagttggagaccaagtagttctgatatcgatcggcagcagattacttgcaggttttcggtgcttgatgggatgctggcaaggccggccgccggacagattggcgactgcggcaacaatggagcggcctagggcttctgcccagttttctcgggtttgggttggggtctttgggccttggctcaaatccgggttggtgggccttaattcgtgggcttgtaaggagggtgccttgccaccctcacttgtcacttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box-like

Protein Analysis

729

Amino Acids

79.97

Weight (kDa)

6.17

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005923)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g52710 FvH4_6g52710 FvH4_6g52710
malus_domestica	MD09G1017100.v1.1 MD17G1017800.v1.1
prunus_persica	Prupe.3G300300_v2.0.a1 Prupe.3G300300_v2.0.a1 Prupe.3G300300_v2.0.a1
pyrus_communis	pycom111g01390 pycom17g01420 pycom17g01430
rosa_chinensis	RchiOBHm_Chr2g0174221 RchiOBHm_Chr2g0174321
rosa_laevigata	RLG00000022257
rosa_multiflora	Rmu_sc0000954.1_g000005 Rmu_sc0000954.1_g000009 Rmu_sc0007150.1_g000009 Rmu_sc0015388.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078320
rosa_rugosa	Rorug02G0576100
rosa_samantha	Rh2AG655700 Rh2AG655900 Rh2BG666900 Rh2BG667100 Rh2CG630800 Rh2DG681300 Rh2DG681600
rosa_wichuraiana	Rw2G053800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	991
Acc36I	ACCTGC	2 cut(s)	705, 1976
AccB1I	GGYRCC	2 cut(s)	1197, 2162
AccBSI	CCGCTC	1 cut(s)	2059
AccI	GTMKAC	2 cut(s)	263, 1924
AccII	CGCG	1 cut(s)	897
AclI	AACGTT	1 cut(s)	1402
AclWI	GGATC	9 cut(s)	108, 233, 488, 696, 737, 800, 1756, 1849, 1872
AcoI	YGGCCR	4 cut(s)	535, 776, 1657, 2021
AcsI	RAATTY	3 cut(s)	619, 814, 1073
AfaI	GTAC	3 cut(s)	1148, 1482, 1632
AfeI	AGCGCT	1 cut(s)	400
AfiI	CCNNNNNNNGG	7 cut(s)	175, 422, 885, 1102, 1745, 1832, 2026
AflII	CTTAAG	1 cut(s)	850
AjnI	CCWGG	7 cut(s)	937, 1006, 1101, 1193, 1348, 1505, 1573
AjuI	GAANNNNNNNTTGG	2 cut(s)	567, 599
AloI	GAACNNNNNNTCC	2 cut(s)	1428, 1460
AluBI	AGCT	6 cut(s)	465, 569, 1308, 1552, 1777, 1905
AluI	AGCT	6 cut(s)	465, 569, 1308, 1552, 1777, 1905
Alw21I	GWGCWC	1 cut(s)	643
Alw26I	GTCTC	6 cut(s)	21, 1040, 1198, 1320, 1702, 1938
AlwI	GGATC	9 cut(s)	108, 233, 488, 696, 737, 800, 1756, 1849, 1872
Ama87I	CYCGRG	2 cut(s)	1830, 2085
Aor51HI	AGCGCT	1 cut(s)	400
ApeKI	GCWGC	4 cut(s)	889, 1345, 1902, 1971
ApoI	RAATTY	3 cut(s)	619, 814, 1073
ArsI	GACNNNNNNTTYG	4 cut(s)	838, 870, 1043, 1075
AspA2I	CCTAGG	1 cut(s)	2063
AspLEI	GCGC	2 cut(s)	401, 1172
AspS9I	GGNCC	4 cut(s)	984, 1586, 2108, 2134
AsuC2I	CCSGG	1 cut(s)	2125
AsuHPI	GGTGA	8 cut(s)	140, 191, 437, 442, 556, 1426, 1559, 1690
AsuII	TTCGAA	1 cut(s)	1062
AvaI	CYCGRG	2 cut(s)	1830, 2085
AvaII	GGWCC	2 cut(s)	984, 1586
AvrII	CCTAGG	1 cut(s)	2063
AxyI	CCTNAGG	1 cut(s)	980
BalI	TGGCCA	2 cut(s)	537, 778
BanI	GGYRCC	2 cut(s)	1197, 2162
BanII	GRGCYC	1 cut(s)	832
BauI	CACGAG	1 cut(s)	18
Bbv12I	GWGCWC	1 cut(s)	643
BbvI	GCAGC	4 cut(s)	876, 1357, 1914, 1983
BccI	CCATC	8 cut(s)	119, 244, 353, 434, 464, 482, 1668, 1996
BceAI	ACGGC	2 cut(s)	288, 1817
BciT130I	CCWGG	7 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575
BciVI	GTATCC	1 cut(s)	51
BclI	TGATCA	1 cut(s)	1795
BcnI	CCSGG	1 cut(s)	2125
BcoDI	GTCTC	6 cut(s)	21, 1040, 1198, 1320, 1702, 1938
BfaI	CTAG	6 cut(s)	822, 857, 1355, 1610, 1641, 2064
BfmI	CTRYAG	2 cut(s)	996, 1590
BfoI	RGCGCY	1 cut(s)	402
BfrI	CTTAAG	1 cut(s)	850
BfuAI	ACCTGC	2 cut(s)	705, 1976
BfuI	GTATCC	1 cut(s)	51
BlnI	CCTAGG	1 cut(s)	2063
Bme1390I	CCNGG	8 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575, 2125
Bme18I	GGWCC	2 cut(s)	984, 1586
BmeT110I	CYCGRG	2 cut(s)	1830, 2085
BmgT120I	GGNCC	4 cut(s)	984, 1586, 2108, 2134
BmiI	GGNNCC	3 cut(s)	1199, 1587, 2164
BmrFI	CCNGG	8 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575, 2125
BmrI	ACTGGG	2 cut(s)	431, 2071
BmsI	GCATC	8 cut(s)	121, 143, 640, 793, 901, 975, 1591, 1997
BmuI	ACTGGG	2 cut(s)	431, 2071
Bpu10I	CCTNAGC	2 cut(s)	570, 831
Bpu14I	TTCGAA	1 cut(s)	1062
BpuEI	CTTGAG	1 cut(s)	311
BpuMI	CCSGG	1 cut(s)	2125
Bsa29I	ATCGAT	2 cut(s)	449, 1964
BsaBI	GATNNNNATC	1 cut(s)	1964
BsaI	GGTCTC	2 cut(s)	1040, 1938
BsaJI	CCNNGG	9 cut(s)	914, 1101, 1121, 1193, 1243, 1321, 1506, 2063, 2111
BsaWI	WCCGGW	1 cut(s)	1888
BsaXI	ACNNNNNCTCC	4 cut(s)	483, 513, 1935, 1965
Bsc4I	CCNNNNNNNGG	7 cut(s)	175, 422, 885, 1102, 1745, 1832, 2026
Bse118I	RCCGGY	2 cut(s)	580, 2019
Bse1I	ACTGG	4 cut(s)	426, 1766, 1932, 2077
Bse21I	CCTNAGG	1 cut(s)	980
Bse8I	GATNNNNATC	1 cut(s)	1964
BseBI	CCWGG	7 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575
BseCI	ATCGAT	2 cut(s)	449, 1964
BseDI	CCNNGG	9 cut(s)	914, 1101, 1121, 1193, 1243, 1321, 1506, 2063, 2111
BseGI	GGATG	7 cut(s)	130, 255, 340, 364, 559, 947, 2012
BseJI	GATNNNNATC	1 cut(s)	1964
BseLI	CCNNNNNNNGG	7 cut(s)	175, 422, 885, 1102, 1745, 1832, 2026
BseMII	CTCAG	3 cut(s)	39, 845, 1277
BseNI	ACTGG	4 cut(s)	426, 1766, 1932, 2077
BseRI	GAGGAG	2 cut(s)	533, 772
BseX3I	CGGCCG	1 cut(s)	2021
BseXI	GCAGC	4 cut(s)	876, 1357, 1914, 1983
BseYI	CCCAGC	2 cut(s)	1081, 1228
BsgI	GTGCAG	3 cut(s)	1107, 1291, 1514
Bsh1236I	CGCG	1 cut(s)	897
Bsh1285I	CGRYCG	3 cut(s)	1893, 1968, 2024
BshNI	GGYRCC	2 cut(s)	1197, 2162
BshVI	ATCGAT	2 cut(s)	449, 1964
BsiEI	CGRYCG	3 cut(s)	1893, 1968, 2024
BsiHKAI	GWGCWC	1 cut(s)	643
BsiHKCI	CYCGRG	2 cut(s)	1830, 2085
BsiSI	CCGG	6 cut(s)	416, 581, 1889, 2020, 2027, 2124
BslI	CCNNNNNNNGG	7 cut(s)	175, 422, 885, 1102, 1745, 1832, 2026
BsmAI	GTCTC	6 cut(s)	21, 1040, 1198, 1320, 1702, 1938
Bso31I	GGTCTC	2 cut(s)	1040, 1938
BsoBI	CYCGRG	2 cut(s)	1830, 2085
Bsp119I	TTCGAA	1 cut(s)	1062
Bsp1286I	GDGCHC	2 cut(s)	643, 832
BspCNI	CTCAG	3 cut(s)	38, 844, 1276
BspDI	ATCGAT	2 cut(s)	449, 1964
BspFNI	CGCG	1 cut(s)	897
BspLI	GGNNCC	3 cut(s)	1199, 1587, 2164
BspMAI	CTGCAG	2 cut(s)	1000, 1594
BspMI	ACCTGC	2 cut(s)	705, 1976
BspPI	GGATC	9 cut(s)	108, 233, 488, 696, 737, 800, 1756, 1849, 1872
BspT104I	TTCGAA	1 cut(s)	1062
BspT107I	GGYRCC	2 cut(s)	1197, 2162
BspTI	CTTAAG	1 cut(s)	850
BspTNI	GGTCTC	2 cut(s)	1040, 1938
BsrBI	CCGCTC	1 cut(s)	2059
BsrFI	RCCGGY	2 cut(s)	580, 2019
BsrI	ACTGG	4 cut(s)	426, 1766, 1932, 2077
BssAI	RCCGGY	2 cut(s)	580, 2019
BssECI	CCNNGG	9 cut(s)	914, 1101, 1121, 1193, 1243, 1321, 1506, 2063, 2111
BssSI	CACGAG	1 cut(s)	18
BssT1I	CCWWGG	5 cut(s)	914, 1243, 1321, 2063, 2111
Bst2BI	CACGAG	1 cut(s)	18
Bst2UI	CCWGG	7 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575
Bst4CI	ACNGT	4 cut(s)	1125, 1369, 1547, 1713
Bst6I	CTCTTC	3 cut(s)	110, 1059, 1530
BstAFI	CTTAAG	1 cut(s)	850
BstAPI	GCANNNNNTGC	2 cut(s)	1278, 1287
BstBI	TTCGAA	1 cut(s)	1062
BstC8I	GCNNGC	7 cut(s)	1000, 1189, 1279, 1733, 1823, 2012, 2021
BstDEI	CTNAG	8 cut(s)	25, 36, 570, 831, 980, 1208, 1263, 2187
BstDSI	CCRYGG	1 cut(s)	1121
BstENI	CCTNNNNNAGG	1 cut(s)	1830
BstF5I	GGATG	7 cut(s)	130, 255, 340, 364, 559, 947, 2012
BstFNI	CGCG	1 cut(s)	897
BstH2I	RGCGCY	1 cut(s)	402
BstHHI	GCGC	2 cut(s)	401, 1172
BstMAI	GTCTC	6 cut(s)	21, 1040, 1198, 1320, 1702, 1938
BstMCI	CGRYCG	3 cut(s)	1893, 1968, 2024
BstNI	CCWGG	7 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575
BstNSI	RCATGY	1 cut(s)	1191
BstSCI	CCNGG	8 cut(s)	937, 1006, 1101, 1193, 1348, 1505, 1573, 2123
BstSFI	CTRYAG	2 cut(s)	996, 1590
BstUI	CGCG	1 cut(s)	897
BstV1I	GCAGC	4 cut(s)	876, 1357, 1914, 1983
BstX2I	RGATCY	1 cut(s)	688
BstXI	CCANNNNNNTGG	1 cut(s)	1789
BstYI	RGATCY	1 cut(s)	688
BstZI	CGGCCG	1 cut(s)	2021
Bsu15I	ATCGAT	2 cut(s)	449, 1964
Bsu36I	CCTNAGG	1 cut(s)	980
BsuI	GTATCC	1 cut(s)	51
BsuTUI	ATCGAT	2 cut(s)	449, 1964
BtgI	CCRYGG	1 cut(s)	1121
BtgZI	GCGATG	1 cut(s)	878
BtsCI	GGATG	7 cut(s)	130, 255, 340, 364, 559, 947, 2012
BtsIMutI	CAGTG	2 cut(s)	795, 1758
BveI	ACCTGC	2 cut(s)	705, 1976
Cac8I	GCNNGC	7 cut(s)	1000, 1189, 1279, 1733, 1823, 2012, 2021
CfoI	GCGC	2 cut(s)	401, 1172
Cfr10I	RCCGGY	2 cut(s)	580, 2019
Cfr13I	GGNCC	4 cut(s)	984, 1586, 2108, 2134
ClaI	ATCGAT	2 cut(s)	449, 1964
CseI	GACGC	1 cut(s)	1662
Csp6I	GTAC	3 cut(s)	1147, 1481, 1631
CviAII	CATG	7 cut(s)	539, 647, 728, 870, 1133, 1188, 1786
CviQI	GTAC	3 cut(s)	1147, 1481, 1631
DdeI	CTNAG	8 cut(s)	25, 36, 570, 831, 980, 1208, 1263, 2187
DrdI	GACNNNNNNGTC	1 cut(s)	991
DseDI	GACNNNNNNGTC	1 cut(s)	991
EaeI	YGGCCR	4 cut(s)	535, 776, 1657, 2021
EagI	CGGCCG	1 cut(s)	2021
Eam1104I	CTCTTC	3 cut(s)	110, 1059, 1530
EarI	CTCTTC	3 cut(s)	110, 1059, 1530
EclXI	CGGCCG	1 cut(s)	2021
Eco130I	CCWWGG	5 cut(s)	914, 1243, 1321, 2063, 2111
Eco24I	GRGCYC	1 cut(s)	832
Eco31I	GGTCTC	2 cut(s)	1040, 1938
Eco32I	GATATC	1 cut(s)	1962
Eco47I	GGWCC	2 cut(s)	984, 1586
Eco47III	AGCGCT	1 cut(s)	400
Eco52I	CGGCCG	1 cut(s)	2021
Eco81I	CCTNAGG	1 cut(s)	980
Eco88I	CYCGRG	2 cut(s)	1830, 2085
EcoNI	CCTNNNNNAGG	1 cut(s)	1830
EcoO109I	RGGNCCY	2 cut(s)	984, 1586
EcoRII	CCWGG	7 cut(s)	937, 1006, 1101, 1193, 1348, 1505, 1573
EcoRV	GATATC	1 cut(s)	1962
EcoT14I	CCWWGG	5 cut(s)	914, 1243, 1321, 2063, 2111
EcoT22I	ATGCAT	2 cut(s)	136, 667
EcoT38I	GRGCYC	1 cut(s)	832
ErhI	CCWWGG	5 cut(s)	914, 1243, 1321, 2063, 2111
FaeI	CATG	7 cut(s)	542, 650, 731, 873, 1136, 1191, 1789
FatI	CATG	7 cut(s)	538, 646, 727, 869, 1132, 1187, 1785
FauI	CCCGC	1 cut(s)	1640
FauNDI	CATATG	2 cut(s)	457, 1393
FbaI	TGATCA	1 cut(s)	1795
FblI	GTMKAC	2 cut(s)	263, 1924
FokI	GGATG	7 cut(s)	137, 262, 347, 371, 566, 954, 2019
FriOI	GRGCYC	1 cut(s)	832
FseI	GGCCGGCC	1 cut(s)	2023
FspBI	CTAG	6 cut(s)	822, 857, 1355, 1610, 1641, 2064
GlaI	GCGC	2 cut(s)	400, 1171
GsaI	CCCAGC	2 cut(s)	1085, 1232
HaeII	RGCGCY	1 cut(s)	402
HapII	CCGG	6 cut(s)	416, 581, 1889, 2020, 2027, 2124
HgaI	GACGC	1 cut(s)	1662
HhaI	GCGC	2 cut(s)	401, 1172
Hin1II	CATG	7 cut(s)	542, 650, 731, 873, 1136, 1191, 1789
Hin6I	GCGC	2 cut(s)	399, 1170
HinP1I	GCGC	2 cut(s)	399, 1170
HincII	GTYRAC	3 cut(s)	1365, 1759, 1925
HindII	GTYRAC	3 cut(s)	1365, 1759, 1925
HinfI	GANTC	5 cut(s)	10, 314, 451, 724, 1885
HpaI	GTTAAC	1 cut(s)	1759
HpaII	CCGG	6 cut(s)	416, 581, 1889, 2020, 2027, 2124
HphI	GGTGA	8 cut(s)	140, 191, 437, 442, 556, 1426, 1559, 1690
Hpy166II	GTNNAC	5 cut(s)	264, 547, 1365, 1759, 1925
Hpy188I	TCNGA	6 cut(s)	381, 1257, 1266, 1740, 1774, 1959
Hpy188III	TCNNGA	3 cut(s)	221, 686, 1830
Hpy8I	GTNNAC	5 cut(s)	264, 547, 1365, 1759, 1925
Hpy99I	CGWCG	2 cut(s)	1678, 1861
HpyAV	CCTTC	8 cut(s)	54, 213, 298, 343, 626, 1252, 1492, 1836
HpyCH4III	ACNGT	4 cut(s)	1125, 1369, 1547, 1713
HpyCH4IV	ACGT	1 cut(s)	1402
HpyF3I	CTNAG	8 cut(s)	25, 36, 570, 831, 980, 1208, 1263, 2187
HpySE526I	ACGT	1 cut(s)	1402
Hsp92II	CATG	7 cut(s)	542, 650, 731, 873, 1136, 1191, 1789
HspAI	GCGC	2 cut(s)	399, 1170
KroI	GCCGGC	1 cut(s)	2019
KroNI	GCCGGC	1 cut(s)	2021
Ksp22I	TGATCA	1 cut(s)	1795
KspAI	GTTAAC	1 cut(s)	1759
LmnI	GCTCC	4 cut(s)	566, 646, 759, 2056
Lsp1109I	GCAGC	4 cut(s)	876, 1357, 1914, 1983
LweI	GCATC	8 cut(s)	121, 143, 640, 793, 901, 975, 1591, 1997
MaeI	CTAG	6 cut(s)	822, 857, 1355, 1610, 1641, 2064
MaeII	ACGT	1 cut(s)	1402
MaeIII	GTNAC	4 cut(s)	1414, 1678, 1687, 2182
MbiI	CCGCTC	1 cut(s)	2059
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	2 cut(s)	643, 832
MlsI	TGGCCA	2 cut(s)	537, 778
MluNI	TGGCCA	2 cut(s)	537, 778
MlyI	GAGTC	1 cut(s)	323
MmeI	TCCRAC	2 cut(s)	565, 1921
Mox20I	TGGCCA	2 cut(s)	537, 778
Mph1103I	ATGCAT	2 cut(s)	136, 667
MroNI	GCCGGC	1 cut(s)	2019
MscI	TGGCCA	2 cut(s)	537, 778
MslI	CAYNNNNRTG	1 cut(s)	1665
Msp20I	TGGCCA	2 cut(s)	537, 778
MspCI	CTTAAG	1 cut(s)	850
MspI	CCGG	6 cut(s)	416, 581, 1889, 2020, 2027, 2124
MspR9I	CCNGG	8 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575, 2125
MvaI	CCWGG	7 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575
MvnI	CGCG	1 cut(s)	897
NaeI	GCCGGC	1 cut(s)	2021
NciI	CCSGG	1 cut(s)	2125
NdeI	CATATG	2 cut(s)	457, 1393
NgoMIV	GCCGGC	1 cut(s)	2019
NlaIII	CATG	7 cut(s)	542, 650, 731, 873, 1136, 1191, 1789
NlaIV	GGNNCC	3 cut(s)	1199, 1587, 2164
NmeAIII	GCCGAG	1 cut(s)	657
NmuCI	GTSAC	4 cut(s)	1414, 1678, 1687, 2182
NsiI	ATGCAT	2 cut(s)	136, 667
NspI	RCATGY	1 cut(s)	1191
NspV	TTCGAA	1 cut(s)	1062
PaeI	GCATGC	1 cut(s)	1191
PaeR7I	CTCGAG	1 cut(s)	1830
PdiI	GCCGGC	1 cut(s)	2021
PfeI	GAWTC	4 cut(s)	10, 451, 724, 1885
PfoI	TCCNGGA	1 cut(s)	937
Ple19I	CGATCG	1 cut(s)	1968
PleI	GAGTC	1 cut(s)	322
PpsI	GAGTC	1 cut(s)	322
PpuMI	RGGWCCY	2 cut(s)	984, 1586
Psp1406I	AACGTT	1 cut(s)	1402
Psp5II	RGGWCCY	2 cut(s)	984, 1586
Psp6I	CCWGG	7 cut(s)	937, 1006, 1101, 1193, 1348, 1505, 1573
PspFI	CCCAGC	2 cut(s)	1081, 1228
PspGI	CCWGG	7 cut(s)	937, 1006, 1101, 1193, 1348, 1505, 1573
PspN4I	GGNNCC	3 cut(s)	1199, 1587, 2164
PspPI	GGNCC	4 cut(s)	984, 1586, 2108, 2134
PspPPI	RGGWCCY	2 cut(s)	984, 1586
PstI	CTGCAG	2 cut(s)	1000, 1594
PsuI	RGATCY	1 cut(s)	688
PvuI	CGATCG	1 cut(s)	1968
RigI	GGCCGGCC	1 cut(s)	2023
RsaI	GTAC	3 cut(s)	1148, 1482, 1632
RsaNI	GTAC	3 cut(s)	1147, 1481, 1631
RseI	CAYNNNNRTG	1 cut(s)	1665
SalI	GTCGAC	1 cut(s)	1923
Sau96I	GGNCC	4 cut(s)	984, 1586, 2108, 2134
SchI	GAGTC	1 cut(s)	323
ScrFI	CCNGG	8 cut(s)	939, 1008, 1103, 1195, 1350, 1507, 1575, 2125
SduI	GDGCHC	2 cut(s)	643, 832
SfaNI	GCATC	8 cut(s)	121, 143, 640, 793, 901, 975, 1591, 1997
SfcI	CTRYAG	2 cut(s)	996, 1590
Sfr274I	CTCGAG	1 cut(s)	1830
SfuI	TTCGAA	1 cut(s)	1062
SinI	GGWCC	2 cut(s)	984, 1586
SlaI	CTCGAG	1 cut(s)	1830
SmiMI	CAYNNNNRTG	1 cut(s)	1665
SmlI	CTYRAG	3 cut(s)	290, 850, 1830
SmoI	CTYRAG	3 cut(s)	290, 850, 1830
SphI	GCATGC	1 cut(s)	1191
SspMI	CTAG	6 cut(s)	822, 857, 1355, 1610, 1641, 2064
StyD4I	CCNGG	8 cut(s)	937, 1006, 1101, 1193, 1348, 1505, 1573, 2123
StyI	CCWWGG	5 cut(s)	914, 1243, 1321, 2063, 2111
TaaI	ACNGT	4 cut(s)	1125, 1369, 1547, 1713
TaiI	ACGT	1 cut(s)	1405
TaqI	TCGA	7 cut(s)	137, 449, 1062, 1831, 1876, 1924, 1964
TatI	WGTACW	1 cut(s)	1630
TauI	GCSGC	9 cut(s)	1505, 1561, 1647, 1659, 1807, 1810, 2026, 2048, 2062
TfiI	GAWTC	4 cut(s)	10, 451, 724, 1885
TscAI	CASTG	2 cut(s)	802, 1758
TseFI	GTSAC	4 cut(s)	1414, 1678, 1687, 2182
TseI	GCWGC	4 cut(s)	889, 1345, 1902, 1971
Tsp45I	GTSAC	4 cut(s)	1414, 1678, 1687, 2182
TspDTI	ATGAA	2 cut(s)	1121, 1449
TspGWI	ACGGA	1 cut(s)	196
TspRI	CASTG	2 cut(s)	802, 1758
Vha464I	CTTAAG	1 cut(s)	850
VpaK11BI	GGWCC	2 cut(s)	984, 1586
XagI	CCTNNNNNAGG	1 cut(s)	1830
XapI	RAATTY	3 cut(s)	619, 814, 1073
XceI	RCATGY	1 cut(s)	1191
XhoI	CTCGAG	1 cut(s)	1830
XmaJI	CCTAGG	1 cut(s)	2063
XmiI	GTMKAC	2 cut(s)	263, 1924
XspI	CTAG	6 cut(s)	822, 857, 1355, 1610, 1641, 2064
Zsp2I	ATGCAT	2 cut(s)	136, 667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.