Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001374.1

Orthogroup ID

OG0015938

Physical Location & Seq

Genomic Coordinates Reverse (-)

54811 .. 57483

Gene Structure 2673 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001374.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

atggcggtttcagctaatacctctcaaattcctcacagccaacacctcccaaatcctcagttccccaaaacccacaagctcgaaaccctaagcttctccaccaagctccaaagtccccatatttcttctagaaaaaccacccaagaactcactgtctgcagcacctcctccgtcaccaccaccaacacccagaaccccaactccgacctaaacgagctctgccgccatgggaacctcgagaaagctctgaagctcttggactctatgcaggaggttcaggttaaggtggaagaagatgcttatgttgctttggttaggctatgcgagtggaagagaacacacgaggatggggctcgtgtgtacaagtgcatatcgaattcgatgacccttttgagcgttaggcttggtaatgcgttgttgagcatgtttgtgaggtttggcaatttggttgatgcttggtatgtgtttgggagaatgggtgagagggatgtgttttcttggaatgttttggttggtgggtatgcgaaagccgggtttttcgatgaggctttgaacttgtatcatagaatgttgtgggttgggattgtgcctgatgtgtatacgtttccttgtgttctcagaacttgtgggggagtgccggacttggcgagagggagggagattcatgtgcatgtgattcgatttgggtttgagtcggatgtcgatattgtgaatgctttgattacaatgtatgtcaaatgtggggtggttggtagtgcacgggtgctgttcgatagaatgcctaggagagataggatttcctggaatgcaatgatttcggggtattttgagaatggggagtatttggaaggactgagattgtttcttatgatgcgggagaattcagttgatccggatttgatgaccgtgactagtttgttatctgcttgcgaggttcttggtgatgacaagttagggagggaaatacatggttatgttttgaaaacagagttggtggacgatgtttcggtgtgtagttctttgattcagatgtattcagttgttggggatttgggggaagcggaggaagtattttctaggatggaagataaagatgtggtgttatggacatcgatgatttcgggttatgtgaataacgcactgcctgagaaggctgtggaaacctacaaagtgatggagcaggagggtattttgccagatgaaataactatagccagtgttatatctgcttgtgcttgtttagggaacttagatatgggtatcaagcttcatgagcttgctgacaggactgggctcatatcgtatgtgatagttgctaatactctcattgatatgtattctaagtgtaaatgcattgacaaagcattggaagtgttccaccagatcccaggaaagaatgtcatatcttggacttcaatcatactcggccttcggataaacaatcggtgctttgaggctttaattttctttcggcaaatgaaactcaggttaaaaccaaattctattaccttggtttccgtcctagctgcttgtgctagaataggagctctgatgtgtggaaaggagattcatgctcatgcactaaggagtggtgtagcatttgatggttttttacccaatgcccttcttgacatgtatgtaaggtgtggaaggatgggatccgcatggaaccagttcaaccataacaagaacgatgtcactggatggaatatcatactaactgggtatgcccagagggggcaaggaaggaatgccgttgagctattccacacaatggctgagtcaagggtagacccagatgagatcacatttatggcgctactatgtgcttgtagtaggtctggtatggttagtgaaggtttggagtatttcattagcatgaaacttaattatggcattgcacctaatctgaaacactatgcctgcattgttgatctacttggccgcgctgggcaattggctgaagctcatgagtttatacagaagatgcctataaatccagatgcagctatctggggagccttgttaaatgcttgtgtgatccacaggcaggttgaacttggtgaacttgcagcccagaaaatatttgaattggatgcccaaagtgtagggtattatatacttatctgtaacctttatgcagacagtggtatgtgggaagaagttgcagtggtaagaaacatgatgagggagagggggctaactgtagatcccgggtgcagttgggttgaggtaaagggaaaagttcatgctttcctaagtggcgataacttccaccctcaaatagaggaacttaatgcagttttggagggattttatgagaaaatgagatcattggctttcacagagccagaaagtaggcttaaagatgaagttgaagcttcaaaagctgagatcttttgtggacacagtgagagactagcagttgcatttggcctcattaatacagccccggggacgcctatatgggtgacaaagaatctttatatgtgccaaagctgtcacagtactgtcaaatttatctctaaggttgtgcgccgggagatttgtgtaagggatactgaaaaattccaccattttaaggatggcttctgtacttgtggggatgaaggttattggggaaagccagataagcgagatgttaaacagatgttgagtagaattcagacgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009451 GO:0009507 GO:0009536 GO:0009628 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

890

Amino Acids

99.79

Weight (kDa)

6.06

Isoelectric Point (pI)

32.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015938)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15510
fragaria_vesca	FvH4_6g30690
malus_domestica	MD17G1201500.v1.1
prunus_persica	Prupe.3G077400_v2.0.a1
pyrus_communis	pycom17g20540
rosa_chinensis	RchiOBHm_Chr2g0137061
rosa_laevigata	RLG00000019603
rosa_multiflora	Rmu_sc0001374.1_g000025
rosa_roxburghii	Rroxscaffold_2G00107710
rosa_rugosa	Rorug02G0337700
rosa_samantha	Rh2AG386800 Rh2BG393600 Rh2CG374100 Rh2DG409700
rosa_wichuraiana	Rw2G031650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2041
AccB7I	CCANNNNNTGG	1 cut(s)	1774
AccI	GTMKAC	2 cut(s)	599, 1791
AccII	CGCG	1 cut(s)	1947
AccIII	TCCGGA	1 cut(s)	892
AciI	CCGC	6 cut(s)	5, 223, 874, 1061, 1662, 1945
AclWI	GGATC	6 cut(s)	884, 1378, 1653, 1666, 2035, 2204
AcoI	YGGCCR	1 cut(s)	1942
AcsI	RAATTY	7 cut(s)	27, 376, 880, 1498, 2516, 2567, 2661
AcuI	CTGAAG	2 cut(s)	269, 1983
AcyI	GRCGYC	1 cut(s)	2459
AfaI	GTAC	3 cut(s)	362, 2509, 2596
AfiI	CCNNNNNNNGG	4 cut(s)	1737, 1774, 2050, 2581
AflIII	ACRYGT	1 cut(s)	1632
AgsI	TTSAA	8 cut(s)	553, 982, 1416, 1678, 2057, 2090, 2378, 2385
AhlI	ACTAGT	1 cut(s)	911
AjiI	CACGTC	1 cut(s)	2670
AjnI	CCWGG	2 cut(s)	800, 1387
AjuI	GAANNNNNNNTTGG	2 cut(s)	974, 1006
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
Alw21I	GWGCWC	3 cut(s)	219, 760, 1549
Alw26I	GTCTC	1 cut(s)	2410
Alw44I	GTGCAC	1 cut(s)	756
AlwI	GGATC	6 cut(s)	884, 1378, 1653, 1666, 2035, 2204
Ama87I	CYCGRG	3 cut(s)	236, 2213, 2452
Aor13HI	TCCGGA	1 cut(s)	892
AoxI	GGCC	3 cut(s)	1426, 1942, 2434
ApaLI	GTGCAC	1 cut(s)	756
ApeKI	GCWGC	4 cut(s)	159, 1526, 2006, 2072
ApoI	RAATTY	7 cut(s)	27, 376, 880, 1498, 2516, 2567, 2661
AseI	ATTAAT	1 cut(s)	2442
Asp700I	GAANNNNTTC	1 cut(s)	1673
AspA2I	CCTAGG	1 cut(s)	782
AspLEI	GCGC	3 cut(s)	1819, 1949, 2538
AsuC2I	CCSGG	6 cut(s)	532, 2214, 2215, 2453, 2454, 2540
AsuHPI	GGTGA	5 cut(s)	166, 491, 953, 2075, 2482
AvaI	CYCGRG	3 cut(s)	236, 2213, 2452
AvrII	CCTAGG	1 cut(s)	782
BaeGI	GKGCMC	1 cut(s)	760
BamHI	GGATCC	1 cut(s)	1658
BanII	GRGCYC	4 cut(s)	219, 355, 1296, 1549
BauI	CACGAG	2 cut(s)	341, 354
Bbv12I	GWGCWC	3 cut(s)	219, 760, 1549
BbvI	GCAGC	4 cut(s)	171, 1513, 2018, 2084
BccI	CCATC	7 cut(s)	341, 1075, 1168, 1598, 1648, 1698, 2579
BceAI	ACGGC	1 cut(s)	1739
BcgI	CGANNNNNNTGC	4 cut(s)	659, 693, 798, 832
BciT130I	CCWGG	2 cut(s)	802, 1389
BciVI	GTATCC	1 cut(s)	2551
BcnI	CCSGG	6 cut(s)	532, 2214, 2215, 2453, 2454, 2540
BcoDI	GTCTC	1 cut(s)	2410
BcuI	ACTAGT	1 cut(s)	911
BfaI	CTAG	7 cut(s)	129, 783, 912, 1077, 1523, 1536, 2420
BfmI	CTRYAG	3 cut(s)	157, 1209, 2205
BfoI	RGCGCY	1 cut(s)	1820
BfuAI	ACCTGC	1 cut(s)	2041
BfuI	GTATCC	1 cut(s)	2551
BglII	AGATCT	1 cut(s)	2394
BisI	GCNGC	6 cut(s)	160, 223, 1527, 1945, 2007, 2073
BlnI	CCTAGG	1 cut(s)	782
BlsI	GCNGC	6 cut(s)	161, 224, 1528, 1946, 2008, 2074
BmcAI	AGTACT	1 cut(s)	2509
Bme1390I	CCNGG	8 cut(s)	532, 802, 1389, 2214, 2215, 2453, 2454, 2540
BmeT110I	CYCGRG	3 cut(s)	236, 2213, 2452
BmgBI	CACGTC	1 cut(s)	2670
BmiI	GGNNCC	4 cut(s)	233, 1660, 1670, 2020
BmrFI	CCNGG	8 cut(s)	532, 802, 1389, 2214, 2215, 2453, 2454, 2540
BmrI	ACTGGG	2 cut(s)	1299, 1731
BmsI	GCATC	6 cut(s)	286, 442, 861, 1977, 1993, 2086
BmuI	ACTGGG	2 cut(s)	1299, 1731
Bpu10I	CCTNAGC	1 cut(s)	89
BpuMI	CCSGG	6 cut(s)	532, 2214, 2215, 2453, 2454, 2540
Bsa29I	ATCGAT	1 cut(s)	1112
BsaHI	GRCGYC	1 cut(s)	2459
BsaJI	CCNNGG	8 cut(s)	226, 782, 1387, 1509, 2213, 2451, 2452, 2453
BsaWI	WCCGGW	1 cut(s)	892
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 215, 463, 493
Bsc4I	CCNNNNNNNGG	4 cut(s)	1737, 1774, 2050, 2581
Bse1I	ACTGG	5 cut(s)	1215, 1294, 1672, 1705, 1726
Bse3DI	GCAATG	2 cut(s)	816, 1896
BseAI	TCCGGA	1 cut(s)	892
BseBI	CCWGG	2 cut(s)	802, 1389
BseCI	ATCGAT	1 cut(s)	1112
BseDI	CCNNGG	8 cut(s)	226, 782, 1387, 1509, 2213, 2451, 2452, 2453
BseGI	GGATG	9 cut(s)	352, 493, 703, 1086, 1659, 1709, 2101, 2590, 2611
BseLI	CCNNNNNNNGG	4 cut(s)	1737, 1774, 2050, 2581
BseMI	GCAATG	2 cut(s)	816, 1896
BseMII	CTCAG	7 cut(s)	71, 631, 845, 1137, 1498, 1770, 2382
BseNI	ACTGG	5 cut(s)	1215, 1294, 1672, 1705, 1726
BseRI	GAGGAG	1 cut(s)	157
BseSI	GKGCMC	1 cut(s)	760
BseXI	GCAGC	4 cut(s)	171, 1513, 2018, 2084
BseYI	CCCAGC	1 cut(s)	1949
BsgI	GTGCAG	1 cut(s)	2239
Bsh1236I	CGCG	1 cut(s)	1947
BshFI	GGCC	3 cut(s)	1428, 1944, 2436
BshVI	ATCGAT	1 cut(s)	1112
BsiHKAI	GWGCWC	3 cut(s)	219, 760, 1549
BsiHKCI	CYCGRG	3 cut(s)	236, 2213, 2452
BsiSI	CCGG	6 cut(s)	531, 638, 893, 2214, 2453, 2539
BslFI	GGGAC	2 cut(s)	99, 2470
BslI	CCNNNNNNNGG	4 cut(s)	1737, 1774, 2050, 2581
BsmAI	GTCTC	1 cut(s)	2410
BsmFI	GGGAC	2 cut(s)	99, 2470
BsmI	GAATGC	4 cut(s)	718, 783, 811, 1756
BsnI	GGCC	3 cut(s)	1428, 1944, 2436
BsoBI	CYCGRG	3 cut(s)	236, 2213, 2452
Bsp1286I	GDGCHC	5 cut(s)	219, 355, 760, 1296, 1549
Bsp13I	TCCGGA	1 cut(s)	892
Bsp1407I	TGTACA	1 cut(s)	360
Bsp143I	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
Bsp19I	CCATGG	1 cut(s)	226
BspACI	CCGC	6 cut(s)	5, 223, 874, 1061, 1662, 1945
BspANI	GGCC	3 cut(s)	1428, 1944, 2436
BspCNI	CTCAG	7 cut(s)	70, 630, 846, 1138, 1497, 1771, 2383
BspDI	ATCGAT	1 cut(s)	1112
BspEI	TCCGGA	1 cut(s)	892
BspFNI	CGCG	1 cut(s)	1947
BspHI	TCATGA	2 cut(s)	1270, 1969
BspLI	GGNNCC	4 cut(s)	233, 1660, 1670, 2020
BspMAI	CTGCAG	1 cut(s)	161
BspMI	ACCTGC	1 cut(s)	2041
BspPI	GGATC	6 cut(s)	884, 1378, 1653, 1666, 2035, 2204
BsrDI	GCAATG	2 cut(s)	816, 1896
BsrGI	TGTACA	1 cut(s)	360
BsrI	ACTGG	5 cut(s)	1215, 1294, 1672, 1705, 1726
BssECI	CCNNGG	8 cut(s)	226, 782, 1387, 1509, 2213, 2451, 2452, 2453
BssMI	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
BssNAI	GTATAC	1 cut(s)	600
BssNI	GRCGYC	1 cut(s)	2459
BssSI	CACGAG	2 cut(s)	341, 354
BssT1I	CCWWGG	3 cut(s)	226, 782, 1509
Bst1107I	GTATAC	1 cut(s)	600
Bst2BI	CACGAG	2 cut(s)	341, 354
Bst2UI	CCWGG	2 cut(s)	802, 1389
Bst4CI	ACNGT	7 cut(s)	154, 907, 2147, 2206, 2411, 2507, 2512
Bst6I	CTCTTC	1 cut(s)	326
BstACI	GRCGYC	1 cut(s)	2459
BstAUI	TGTACA	1 cut(s)	360
BstC8I	GCNNGC	3 cut(s)	928, 1278, 1924
BstDSI	CCRYGG	1 cut(s)	226
BstF5I	GGATG	9 cut(s)	352, 493, 703, 1086, 1659, 1709, 2101, 2590, 2611
BstFNI	CGCG	1 cut(s)	1947
BstH2I	RGCGCY	1 cut(s)	1820
BstHHI	GCGC	3 cut(s)	1819, 1949, 2538
BstKTI	GATC	9 cut(s)	892, 1386, 1661, 1806, 1936, 2043, 2212, 2333, 2397
BstMAI	GTCTC	1 cut(s)	2410
BstMBI	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 305, 1273, 1532, 2387, 2632
BstNI	CCWGG	2 cut(s)	802, 1389
BstNSI	RCATGY	3 cut(s)	427, 674, 1636
BstSCI	CCNGG	8 cut(s)	530, 800, 1387, 2212, 2213, 2451, 2452, 2538
BstSFI	CTRYAG	3 cut(s)	157, 1209, 2205
BstSLI	GKGCMC	1 cut(s)	760
BstUI	CGCG	1 cut(s)	1947
BstV1I	GCAGC	4 cut(s)	171, 1513, 2018, 2084
BstX2I	RGATCY	4 cut(s)	1383, 1658, 2209, 2394
BstYI	RGATCY	4 cut(s)	1383, 1658, 2209, 2394
BstZ17I	GTATAC	1 cut(s)	600
Bsu15I	ATCGAT	1 cut(s)	1112
BsuI	GTATCC	1 cut(s)	2551
BsuRI	GGCC	3 cut(s)	1428, 1944, 2436
BsuTUI	ATCGAT	1 cut(s)	1112
BtgI	CCRYGG	1 cut(s)	226
BtrI	CACGTC	1 cut(s)	2670
BtsCI	GGATG	9 cut(s)	352, 493, 703, 1086, 1659, 1709, 2101, 2590, 2611
BtsI	GCAGTG	2 cut(s)	1139, 2175
BtsIMutI	CAGTG	7 cut(s)	150, 1139, 1222, 1698, 2152, 2175, 2416
BveI	ACCTGC	1 cut(s)	2041
Cac8I	GCNNGC	3 cut(s)	928, 1278, 1924
CciI	TCATGA	2 cut(s)	1270, 1969
CfoI	GCGC	3 cut(s)	1819, 1949, 2538
Cfr9I	CCCGGG	2 cut(s)	2213, 2452
ClaI	ATCGAT	1 cut(s)	1112
CseI	GACGC	1 cut(s)	2467
Csp6I	GTAC	3 cut(s)	361, 2508, 2595
CviQI	GTAC	3 cut(s)	361, 2508, 2595
DpnI	GATC	9 cut(s)	891, 1385, 1660, 1805, 1935, 2042, 2211, 2332, 2396
DpnII	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
EaeI	YGGCCR	1 cut(s)	1942
Eam1104I	CTCTTC	1 cut(s)	326
EarI	CTCTTC	1 cut(s)	326
Ecl136II	GAGCTC	2 cut(s)	217, 1547
Eco130I	CCWWGG	3 cut(s)	226, 782, 1509
Eco24I	GRGCYC	4 cut(s)	219, 355, 1296, 1549
Eco53kI	GAGCTC	2 cut(s)	217, 1547
Eco57I	CTGAAG	2 cut(s)	269, 1983
Eco88I	CYCGRG	3 cut(s)	236, 2213, 2452
EcoICRI	GAGCTC	2 cut(s)	217, 1547
EcoRI	GAATTC	3 cut(s)	376, 880, 2661
EcoRII	CCWGG	2 cut(s)	800, 1387
EcoT14I	CCWWGG	3 cut(s)	226, 782, 1509
EcoT22I	ATGCAT	1 cut(s)	1355
EcoT38I	GRGCYC	4 cut(s)	219, 355, 1296, 1549
ErhI	CCWWGG	3 cut(s)	226, 782, 1509
FalI	AAGNNNNNCTT	2 cut(s)	2573, 2605
FaqI	GGGAC	2 cut(s)	99, 2470
FauI	CCCGC	1 cut(s)	867
FblI	GTMKAC	2 cut(s)	599, 1791
Fnu4HI	GCNGC	6 cut(s)	160, 223, 1527, 1945, 2007, 2073
FokI	GGATG	9 cut(s)	359, 500, 710, 1093, 1666, 1716, 2108, 2597, 2618
FriOI	GRGCYC	4 cut(s)	219, 355, 1296, 1549
Fsp4HI	GCNGC	6 cut(s)	160, 223, 1527, 1945, 2007, 2073
FspBI	CTAG	7 cut(s)	129, 783, 912, 1077, 1523, 1536, 2420
GlaI	GCGC	3 cut(s)	1818, 1948, 2537
GluI	GCNGC	6 cut(s)	160, 223, 1527, 1945, 2007, 2073
GsaI	CCCAGC	1 cut(s)	1953
HaeII	RGCGCY	1 cut(s)	1820
HaeIII	GGCC	3 cut(s)	1428, 1944, 2436
HapII	CCGG	6 cut(s)	531, 638, 893, 2214, 2453, 2539
HgaI	GACGC	1 cut(s)	2467
HhaI	GCGC	3 cut(s)	1819, 1949, 2538
Hin1I	GRCGYC	1 cut(s)	2459
Hin6I	GCGC	3 cut(s)	1817, 1947, 2536
HinP1I	GCGC	3 cut(s)	1817, 1947, 2536
HindIII	AAGCTT	3 cut(s)	91, 1265, 2379
HinfI	GANTC	8 cut(s)	260, 661, 676, 692, 1024, 1567, 1781, 2479
HpaII	CCGG	6 cut(s)	531, 638, 893, 2214, 2453, 2539
HphI	GGTGA	5 cut(s)	166, 491, 953, 2075, 2482
Hpy166II	GTNNAC	7 cut(s)	361, 600, 758, 997, 1792, 2066, 2405
Hpy188I	TCNGA	9 cut(s)	205, 249, 620, 697, 1029, 1434, 1551, 1911, 2667
Hpy188III	TCNNGA	7 cut(s)	129, 238, 893, 1271, 1628, 1970, 2000
Hpy8I	GTNNAC	7 cut(s)	361, 600, 758, 997, 1792, 2066, 2405
HpyAV	CCTTC	8 cut(s)	842, 1144, 1439, 1634, 1644, 1740, 1850, 2603
HpyCH4III	ACNGT	7 cut(s)	154, 907, 2147, 2206, 2411, 2507, 2512
HpyCH4IV	ACGT	2 cut(s)	602, 2669
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 305, 1273, 1532, 2387, 2632
HpySE526I	ACGT	2 cut(s)	602, 2669
Hsp92I	GRCGYC	1 cut(s)	2459
HspAI	GCGC	3 cut(s)	1817, 1947, 2536
Kpn2I	TCCGGA	1 cut(s)	892
Kzo9I	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
LmnI	GCTCC	4 cut(s)	111, 1177, 1544, 2018
Lsp1109I	GCAGC	4 cut(s)	171, 1513, 2018, 2084
LweI	GCATC	6 cut(s)	286, 442, 861, 1977, 1993, 2086
MaeI	CTAG	7 cut(s)	129, 783, 912, 1077, 1523, 1536, 2420
MaeII	ACGT	2 cut(s)	602, 2669
MaeIII	GTNAC	6 cut(s)	172, 907, 1696, 2129, 2470, 2501
MalI	GATC	9 cut(s)	891, 1385, 1660, 1805, 1935, 2042, 2211, 2332, 2396
MboI	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
MboII	GAAGA	7 cut(s)	117, 302, 305, 343, 1097, 1996, 2171
MfeI	CAATTG	1 cut(s)	1955
MflI	RGATCY	4 cut(s)	1383, 1658, 2209, 2394
MhlI	GDGCHC	5 cut(s)	219, 355, 760, 1296, 1549
MlyI	GAGTC	3 cut(s)	254, 701, 1790
MmeI	TCCRAC	2 cut(s)	228, 675
Mph1103I	ATGCAT	1 cut(s)	1355
MroI	TCCGGA	1 cut(s)	892
MroXI	GAANNNNTTC	1 cut(s)	1673
MslI	CAYNNNNRTG	8 cut(s)	345, 428, 669, 972, 1331, 1575, 1811, 1877
MspI	CCGG	6 cut(s)	531, 638, 893, 2214, 2453, 2539
MspR9I	CCNGG	8 cut(s)	532, 802, 1389, 2214, 2215, 2453, 2454, 2540
MunI	CAATTG	1 cut(s)	1955
Mva1269I	GAATGC	4 cut(s)	718, 783, 811, 1756
MvaI	CCWGG	2 cut(s)	802, 1389
MvnI	CGCG	1 cut(s)	1947
MwoI	GCNNNNNNNGC	6 cut(s)	11, 305, 1273, 1532, 2387, 2632
NciI	CCSGG	6 cut(s)	532, 2214, 2215, 2453, 2454, 2540
NcoI	CCATGG	1 cut(s)	226
NdeII	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
NlaIV	GGNNCC	4 cut(s)	233, 1660, 1670, 2020
NmeAIII	GCCGAG	1 cut(s)	1404
NmuCI	GTSAC	5 cut(s)	172, 907, 1696, 2470, 2501
NsiI	ATGCAT	1 cut(s)	1355
NspI	RCATGY	3 cut(s)	427, 674, 1636
PaeR7I	CTCGAG	1 cut(s)	236
PagI	TCATGA	2 cut(s)	1270, 1969
PciI	ACATGT	1 cut(s)	1632
PctI	GAATGC	4 cut(s)	718, 783, 811, 1756
PdmI	GAANNNNTTC	1 cut(s)	1673
PfeI	GAWTC	5 cut(s)	661, 676, 1024, 1567, 2479
PflMI	CCANNNNNTGG	1 cut(s)	1774
PfoI	TCCNGGA	1 cut(s)	800
PkrI	GCNGC	6 cut(s)	161, 224, 1528, 1946, 2008, 2074
PleI	GAGTC	3 cut(s)	254, 700, 1789
PpsI	GAGTC	3 cut(s)	254, 700, 1789
PscI	ACATGT	1 cut(s)	1632
PshBI	ATTAAT	1 cut(s)	2442
Psp124BI	GAGCTC	2 cut(s)	219, 1549
Psp6I	CCWGG	2 cut(s)	800, 1387
PspFI	CCCAGC	1 cut(s)	1949
PspGI	CCWGG	2 cut(s)	800, 1387
PspN4I	GGNNCC	4 cut(s)	233, 1660, 1670, 2020
PstI	CTGCAG	1 cut(s)	161
PsuI	RGATCY	4 cut(s)	1383, 1658, 2209, 2394
RsaI	GTAC	3 cut(s)	362, 2509, 2596
RsaNI	GTAC	3 cut(s)	361, 2508, 2595
RseI	CAYNNNNRTG	8 cut(s)	345, 428, 669, 972, 1331, 1575, 1811, 1877
SacI	GAGCTC	2 cut(s)	219, 1549
SatI	GCNGC	6 cut(s)	160, 223, 1527, 1945, 2007, 2073
Sau3AI	GATC	9 cut(s)	889, 1383, 1658, 1803, 1933, 2040, 2209, 2330, 2394
ScaI	AGTACT	1 cut(s)	2509
SchI	GAGTC	3 cut(s)	254, 701, 1790
ScrFI	CCNGG	8 cut(s)	532, 802, 1389, 2214, 2215, 2453, 2454, 2540
SduI	GDGCHC	5 cut(s)	219, 355, 760, 1296, 1549
SfaNI	GCATC	6 cut(s)	286, 442, 861, 1977, 1993, 2086
SfcI	CTRYAG	3 cut(s)	157, 1209, 2205
Sfr274I	CTCGAG	1 cut(s)	236
SlaI	CTCGAG	1 cut(s)	236
SmaI	CCCGGG	2 cut(s)	2215, 2454
SmiMI	CAYNNNNRTG	8 cut(s)	345, 428, 669, 972, 1331, 1575, 1811, 1877
SmlI	CTYRAG	1 cut(s)	236
SmoI	CTYRAG	1 cut(s)	236
SpeI	ACTAGT	1 cut(s)	911
SsiI	CCGC	6 cut(s)	5, 223, 874, 1061, 1662, 1945
SspI	AATATT	1 cut(s)	2085
SspMI	CTAG	7 cut(s)	129, 783, 912, 1077, 1523, 1536, 2420
SstI	GAGCTC	2 cut(s)	219, 1549
StyD4I	CCNGG	8 cut(s)	530, 800, 1387, 2212, 2213, 2451, 2452, 2538
StyI	CCWWGG	3 cut(s)	226, 782, 1509
TaaI	ACNGT	7 cut(s)	154, 907, 2147, 2206, 2411, 2507, 2512
TaiI	ACGT	2 cut(s)	605, 2672
TaqI	TCGA	9 cut(s)	81, 237, 374, 380, 540, 679, 702, 771, 1112
TatI	WGTACW	3 cut(s)	360, 2507, 2594
TauI	GCSGC	2 cut(s)	225, 1947
TfiI	GAWTC	5 cut(s)	661, 676, 1024, 1567, 2479
TscAI	CASTG	7 cut(s)	157, 1146, 1222, 1705, 2152, 2175, 2416
TseFI	GTSAC	5 cut(s)	172, 907, 1696, 2470, 2501
TseI	GCWGC	4 cut(s)	159, 1526, 2006, 2072
Tsp45I	GTSAC	5 cut(s)	172, 907, 1696, 2470, 2501
TspGWI	ACGGA	2 cut(s)	160, 1507
TspMI	CCCGGG	2 cut(s)	2213, 2452
TspRI	CASTG	7 cut(s)	157, 1146, 1222, 1705, 2152, 2175, 2416
Van91I	CCANNNNNTGG	1 cut(s)	1774
VneI	GTGCAC	1 cut(s)	756
VspI	ATTAAT	1 cut(s)	2442
XapI	RAATTY	7 cut(s)	27, 376, 880, 1498, 2516, 2567, 2661
XbaI	TCTAGA	1 cut(s)	128
XceI	RCATGY	3 cut(s)	427, 674, 1636
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2582
XhoI	CTCGAG	1 cut(s)	236
XmaI	CCCGGG	2 cut(s)	2213, 2452
XmaJI	CCTAGG	1 cut(s)	782
XmiI	GTMKAC	2 cut(s)	599, 1791
XmnI	GAANNNNTTC	1 cut(s)	1673
XspI	CTAG	7 cut(s)	129, 783, 912, 1077, 1523, 1536, 2420
ZrmI	AGTACT	1 cut(s)	2509
Zsp2I	ATGCAT	1 cut(s)	1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.