Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002031.1

Orthogroup ID

OG0012828

Physical Location & Seq

Genomic Coordinates Reverse (-)

54898 .. 57770

Gene Structure 2873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002031.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

atggaaggacctttcactcaccaagaggaaagagaaggagcccatctacaaaaccagtaccaacagctcaagctttgtctgccattggtgaggttcagaggacccaatatccagaacccagtttccatatttgggttttgcctgtccaagtacataagaagcctctattccagagctcgaatctctaactcttgttgcttggggaggctgacttacaatggtatggtagtgatgaacaactctgcattttgtgattcaactgaagaaggaatagctgcaatggaaagtgaggggcttgatgaaattgtgggtaaaggtgagacctttggggagttgattgagattgaggagaagggtcgtgagagctgttcaagttcagattttttgacatctgagactacagtgcatgaggagcagagtcacagtagctctgaggagacatcttctccaccctcattgggttggcctgttaagaaatctgaggcaccagattgtaccagtgagaatggggctgaagcccatttggatgataggaaattacagaaacaagggtctacaatctcagagactgagttgatgaaggagaggttttcaaaattgctgcttggagaagatatgtcaggttgtggaaatggggtttgtacagcattggctatatcgaatgcgattactaatctttgtgcaaccctatttgggcaactttggagactagaacctctaccgcgggagaagaaattgatgtggcgaagagagatggaatggcttctttgtgtgagtgatcacatcgttgagttgaaaccttcttggcagacatttccagacggaagcaaattggaggtcatgagttgcagaccccgctcagatctttatgttaatctcccagcccttcgcaaattggataacatgcttcttgaaatattagatggttttgacgagacagagttctggtatgttgaccaaggaattctggctccagatgctgatgggtcaacctccttccgaagagcatttcaacgccaagaagagaagtggtggctccctgtgccccgagttcctcctggtggactccatgaaagtacaagaaagcaagtgcagcacaagcgtgattgcacaaatcaaatacttaaagctgcaatggcaatcaatagtatcactttagctgatatcgaagtccctgaatcatatctggaagctcttccaaagaatggaagagcaagcttaggggatgttatttatcgatatatttcatcagatcaattctcccctgaatgtctgcttgattgccttgatctgtcctctgaacatcaagctatagagattgccaacagagttgagtcctcaatctacttgtggcgccaaaagacaaactcaaaacctaaaaataacaacaccagaaatagtaagtcgtcatgggaaatggtcaaggacatgatggtggttgatgcagataaaagggaattacttgcagaaagagcagaaagtctcttaatttgtttgaagcaacgcttccctggtcttccacagacatccctcgatatgagcaagattcagtacaataaggatgttgggaaatccatcttggagagctattcaagggttcttgagagcctggcattcaacattgtggcacgcattgatgatctgctttatgtagatgacttgaccaggcattcagatcagttcccatcaaggcactccgatcagttcccatcaatctccaaagttagtgtgatttcacacaaggcaactcctattccgtactcatcagtgcccatctcaagcactccatataaaacagcttatgccacaccaagcttttcacctgcacatcgagctagccctctccgggtagaacgatcaccattcatgaccaatgccaggatttctcctcagcacggattgggcgtaaagaaagttctgaccgattatcttagcattgatgcaaaaggaaagaattacagcaactcaactgagacaccggattcagcctcagacacaatgcaaacaactcttgaatctcaaatgggactaggttcttttgagtcttcaaatgcatcaagcagcccagcaactcaggactcggacacgcaagaaagaacccacgtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

702

Amino Acids

78.72

Weight (kDa)

5.41

Isoelectric Point (pI)

55.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02010
fragaria_vesca	FvH4_6g12700
malus_domestica	MD04G1139300.v1.1 MD12G1155100.v1.1
prunus_persica	Prupe.6G264800_v2.0.a1
pyrus_communis	pycom04g12750 pycom12g14720
rosa_chinensis	RchiOBHm_Chr3g0464551
rosa_laevigata	RLG00000024683
rosa_multiflora	Rmu_sc0002031.1_g000015 Rmu_sc0014550.1_g000001 Rmu_sc0042806.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415540
rosa_rugosa	Rorug03G0073100
rosa_samantha	Rh3BG135300 Rh3CG138000 Rh3DG136900
rosa_wichuraiana	Rw3G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1831
Acc36I	ACCTGC	1 cut(s)	1831
AccB1I	GGYRCC	2 cut(s)	484, 1353
AccB7I	CCANNNNNTGG	1 cut(s)	1205
AccBSI	CCGCTC	1 cut(s)	858
AccI	GTMKAC	1 cut(s)	554
AccII	CGCG	1 cut(s)	724
AciI	CCGC	3 cut(s)	722, 724, 856
AcsI	RAATTY	1 cut(s)	963
AcuI	CTGAAG	2 cut(s)	282, 534
AcyI	GRCGYC	1 cut(s)	1354
AfaI	GTAC	7 cut(s)	59, 152, 496, 643, 1078, 1553, 1760
AfiI	CCNNNNNNNGG	8 cut(s)	132, 458, 693, 1061, 1205, 1846, 1878, 1895
AjnI	CCWGG	5 cut(s)	1057, 1510, 1608, 1664, 1877
AjuI	GAANNNNNNNTTGG	2 cut(s)	1562, 1594
AleI	CACNNNNGTG	1 cut(s)	1101
AloI	GAACNNNNNNTCC	2 cut(s)	107, 139
Alw21I	GWGCWC	1 cut(s)	178
Alw26I	GTCTC	8 cut(s)	314, 389, 431, 560, 700, 929, 1487, 1967
AlwNI	CAGNNNCTG	2 cut(s)	569, 980
Ama87I	CYCGRG	1 cut(s)	1047
AoxI	GGCC	1 cut(s)	464
ApeKI	GCWGC	5 cut(s)	275, 601, 1093, 1130, 2061
ApoI	RAATTY	1 cut(s)	963
ArsI	GACNNNNNNTTYG	2 cut(s)	822, 854
Asp700I	GAANNNNTTC	2 cut(s)	762, 1194
AspLEI	GCGC	1 cut(s)	1356
AspS9I	GGNCC	2 cut(s)	8, 101
AsuC2I	CCSGG	1 cut(s)	1847
AsuHPI	GGTGA	5 cut(s)	11, 100, 329, 1812, 1851
AsuNHI	GCTAGC	1 cut(s)	1835
AvaI	CYCGRG	1 cut(s)	1047
AvaII	GGWCC	2 cut(s)	8, 101
BaeGI	GKGCMC	2 cut(s)	1047, 1773
BanI	GGYRCC	2 cut(s)	484, 1353
BanII	GRGCYC	2 cut(s)	43, 178
BbsI	GAAGAC	2 cut(s)	1508, 2037
Bbv12I	GWGCWC	1 cut(s)	178
BbvCI	CCTCAGC	1 cut(s)	1890
BbvI	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2073
BccI	CCATC	9 cut(s)	51, 748, 917, 977, 1426, 1583, 1693, 1717, 1781
BciT130I	CCWGG	5 cut(s)	1059, 1512, 1610, 1666, 1879
BclI	TGATCA	1 cut(s)	778
BcnI	CCSGG	1 cut(s)	1847
BcoDI	GTCTC	8 cut(s)	314, 389, 431, 560, 700, 929, 1487, 1967
BfaI	CTAG	3 cut(s)	710, 1836, 2030
BfmI	CTRYAG	2 cut(s)	399, 1311
BfoI	RGCGCY	1 cut(s)	1357
BfuAI	ACCTGC	1 cut(s)	1831
BglII	AGATCT	1 cut(s)	862
BisI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2062
BlsI	GCNGC	5 cut(s)	277, 603, 1095, 1132, 2063
Bme1390I	CCNGG	6 cut(s)	1059, 1512, 1610, 1666, 1847, 1879
Bme18I	GGWCC	2 cut(s)	8, 101
BmeT110I	CYCGRG	1 cut(s)	1047
BmgT120I	GGNCC	2 cut(s)	8, 101
BmiI	GGNNCC	6 cut(s)	40, 103, 486, 972, 1037, 1355
BmrFI	CCNGG	6 cut(s)	1059, 1512, 1610, 1666, 1847, 1879
BmrI	ACTGGG	1 cut(s)	113
BmsI	GCATC	4 cut(s)	967, 1432, 1930, 2063
BmtI	GCTAGC	1 cut(s)	1839
BmuI	ACTGGG	1 cut(s)	113
BpiI	GAAGAC	2 cut(s)	1508, 2037
BpmI	CTGGAG	1 cut(s)	957
Bpu10I	CCTNAGC	2 cut(s)	1219, 1890
BpuEI	CTTGAG	3 cut(s)	53, 1622, 1762
BpuMI	CCSGG	1 cut(s)	1847
Bsa29I	ATCGAT	1 cut(s)	1237
BsaHI	GRCGYC	1 cut(s)	1354
BsaI	GGTCTC	1 cut(s)	314
BsaJI	CCNNGG	3 cut(s)	722, 958, 1510
BsaWI	WCCGGW	1 cut(s)	1978
BsaXI	ACNNNNNCTCC	2 cut(s)	430, 460
Bsc4I	CCNNNNNNNGG	8 cut(s)	132, 458, 693, 1061, 1205, 1846, 1878, 1895
Bse1I	ACTGG	3 cut(s)	55, 119, 498
Bse3DI	GCAATG	2 cut(s)	285, 1140
BseBI	CCWGG	5 cut(s)	1059, 1512, 1610, 1666, 1879
BseCI	ATCGAT	1 cut(s)	1237
BseDI	CCNNGG	3 cut(s)	722, 958, 1510
BseGI	GGATG	4 cut(s)	532, 1231, 1526, 1567
BseLI	CCNNNNNNNGG	8 cut(s)	132, 458, 693, 1061, 1205, 1846, 1878, 1895
BseMI	GCAATG	2 cut(s)	285, 1140
BseNI	ACTGG	3 cut(s)	55, 119, 498
BseRI	GAGGAG	4 cut(s)	362, 425, 449, 1878
BseSI	GKGCMC	2 cut(s)	1047, 1773
BseXI	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2073
BseYI	CCCAGC	2 cut(s)	880, 2065
BsgI	GTGCAG	2 cut(s)	1112, 1809
Bsh1236I	CGCG	1 cut(s)	724
BshFI	GGCC	1 cut(s)	466
BshNI	GGYRCC	2 cut(s)	484, 1353
BshVI	ATCGAT	1 cut(s)	1237
BsiHKAI	GWGCWC	1 cut(s)	178
BsiHKCI	CYCGRG	1 cut(s)	1047
BsiSI	CCGG	2 cut(s)	1846, 1979
BslFI	GGGAC	2 cut(s)	1157, 2040
BslI	CCNNNNNNNGG	8 cut(s)	132, 458, 693, 1061, 1205, 1846, 1878, 1895
BsmAI	GTCTC	8 cut(s)	314, 389, 431, 560, 700, 929, 1487, 1967
BsmFI	GGGAC	2 cut(s)	1157, 2040
BsmI	GAATGC	3 cut(s)	667, 1613, 1669
BsnI	GGCC	1 cut(s)	466
Bso31I	GGTCTC	1 cut(s)	314
BsoBI	CYCGRG	1 cut(s)	1047
Bsp1286I	GDGCHC	4 cut(s)	43, 178, 1047, 1773
Bsp1407I	TGTACA	1 cut(s)	641
Bsp143I	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
BspACI	CCGC	3 cut(s)	722, 724, 856
BspANI	GGCC	1 cut(s)	466
BspDI	ATCGAT	1 cut(s)	1237
BspFNI	CGCG	1 cut(s)	724
BspHI	TCATGA	2 cut(s)	840, 1866
BspLI	GGNNCC	6 cut(s)	40, 103, 486, 972, 1037, 1355
BspMI	ACCTGC	1 cut(s)	1831
BspOI	GCTAGC	1 cut(s)	1839
BspQI	GCTCTTC	3 cut(s)	997, 1200, 1204
BspT107I	GGYRCC	2 cut(s)	484, 1353
BspTNI	GGTCTC	1 cut(s)	314
BsrBI	CCGCTC	1 cut(s)	858
BsrDI	GCAATG	2 cut(s)	285, 1140
BsrGI	TGTACA	1 cut(s)	641
BsrI	ACTGG	3 cut(s)	55, 119, 498
BssECI	CCNNGG	3 cut(s)	722, 958, 1510
BssMI	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
BssNI	GRCGYC	1 cut(s)	1354
BssT1I	CCWWGG	1 cut(s)	958
Bst2UI	CCWGG	5 cut(s)	1059, 1512, 1610, 1666, 1879
Bst4CI	ACNGT	2 cut(s)	403, 425
Bst6I	CTCTTC	5 cut(s)	742, 997, 1017, 1200, 1204
BstACI	GRCGYC	1 cut(s)	1354
BstAUI	TGTACA	1 cut(s)	641
BstC8I	GCNNGC	3 cut(s)	1216, 1630, 1837
BstDSI	CCRYGG	1 cut(s)	722
BstF5I	GGATG	4 cut(s)	532, 1231, 1526, 1567
BstFNI	CGCG	1 cut(s)	724
BstH2I	RGCGCY	1 cut(s)	1357
BstHHI	GCGC	1 cut(s)	1356
BstKTI	GATC	8 cut(s)	781, 865, 1255, 1291, 1642, 1678, 1702, 1859
BstMAI	GTCTC	8 cut(s)	314, 389, 431, 560, 700, 929, 1487, 1967
BstMBI	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
BstNI	CCWGG	5 cut(s)	1059, 1512, 1610, 1666, 1879
BstNSI	RCATGY	1 cut(s)	907
BstSCI	CCNGG	6 cut(s)	1057, 1510, 1608, 1664, 1845, 1877
BstSFI	CTRYAG	2 cut(s)	399, 1311
BstSLI	GKGCMC	2 cut(s)	1047, 1773
BstUI	CGCG	1 cut(s)	724
BstV1I	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2073
BstV2I	GAAGAC	2 cut(s)	1508, 2037
BstX2I	RGATCY	1 cut(s)	862
BstYI	RGATCY	1 cut(s)	862
Bsu15I	ATCGAT	1 cut(s)	1237
BsuRI	GGCC	1 cut(s)	466
BsuTUI	ATCGAT	1 cut(s)	1237
BtgI	CCRYGG	1 cut(s)	722
BtsCI	GGATG	4 cut(s)	532, 1231, 1526, 1567
BtsIMutI	CAGTG	3 cut(s)	408, 505, 1773
BveI	ACCTGC	1 cut(s)	1831
Cac8I	GCNNGC	3 cut(s)	1216, 1630, 1837
CaiI	CAGNNNCTG	2 cut(s)	569, 980
CciI	TCATGA	2 cut(s)	840, 1866
CfoI	GCGC	1 cut(s)	1356
Cfr13I	GGNCC	2 cut(s)	8, 101
Cfr42I	CCGCGG	1 cut(s)	725
ClaI	ATCGAT	1 cut(s)	1237
Csp6I	GTAC	7 cut(s)	58, 151, 495, 642, 1077, 1552, 1759
CspCI	CAANNNNNGTGG	2 cut(s)	438, 473
CviAII	CATG	7 cut(s)	407, 841, 904, 1070, 1410, 1429, 1867
CviQI	GTAC	7 cut(s)	58, 151, 495, 642, 1077, 1552, 1759
DinI	GGCGCC	1 cut(s)	1355
DpnI	GATC	8 cut(s)	780, 864, 1254, 1290, 1641, 1677, 1701, 1858
DpnII	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
Eam1104I	CTCTTC	5 cut(s)	742, 997, 1017, 1200, 1204
EarI	CTCTTC	5 cut(s)	742, 997, 1017, 1200, 1204
Ecl136II	GAGCTC	1 cut(s)	176
Eco130I	CCWWGG	1 cut(s)	958
Eco24I	GRGCYC	2 cut(s)	43, 178
Eco31I	GGTCTC	1 cut(s)	314
Eco32I	GATATC	1 cut(s)	1165
Eco47I	GGWCC	2 cut(s)	8, 101
Eco53kI	GAGCTC	1 cut(s)	176
Eco57I	CTGAAG	2 cut(s)	282, 534
Eco88I	CYCGRG	1 cut(s)	1047
EcoICRI	GAGCTC	1 cut(s)	176
EcoO109I	RGGNCCY	2 cut(s)	8, 101
EcoRI	GAATTC	1 cut(s)	963
EcoRII	CCWGG	5 cut(s)	1057, 1510, 1608, 1664, 1877
EcoRV	GATATC	1 cut(s)	1165
EcoT14I	CCWWGG	1 cut(s)	958
EcoT22I	ATGCAT	1 cut(s)	2056
EcoT38I	GRGCYC	2 cut(s)	43, 178
EgeI	GGCGCC	1 cut(s)	1355
EheI	GGCGCC	1 cut(s)	1355
ErhI	CCWWGG	1 cut(s)	958
FaeI	CATG	7 cut(s)	410, 844, 907, 1073, 1413, 1432, 1870
FalI	AAGNNNNNCTT	2 cut(s)	1490, 1522
FaqI	GGGAC	2 cut(s)	1157, 2040
FatI	CATG	7 cut(s)	406, 840, 903, 1069, 1409, 1428, 1866
FauI	CCCGC	2 cut(s)	717, 863
FbaI	TGATCA	1 cut(s)	778
FblI	GTMKAC	1 cut(s)	554
Fnu4HI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2062
FokI	GGATG	4 cut(s)	539, 1238, 1513, 1574
FriOI	GRGCYC	2 cut(s)	43, 178
Fsp4HI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2062
FspBI	CTAG	3 cut(s)	710, 1836, 2030
GlaI	GCGC	1 cut(s)	1355
GluI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2062
GsaI	CCCAGC	2 cut(s)	884, 2069
GsuI	CTGGAG	1 cut(s)	957
HaeII	RGCGCY	1 cut(s)	1357
HaeIII	GGCC	1 cut(s)	466
HapII	CCGG	2 cut(s)	1846, 1979
HhaI	GCGC	1 cut(s)	1356
Hin1I	GRCGYC	1 cut(s)	1354
Hin1II	CATG	7 cut(s)	410, 844, 907, 1073, 1413, 1432, 1870
Hin6I	GCGC	1 cut(s)	1354
HinP1I	GCGC	1 cut(s)	1354
HincII	GTYRAC	2 cut(s)	955, 990
HindII	GTYRAC	2 cut(s)	955, 990
HindIII	AAGCTT	3 cut(s)	71, 1216, 1813
HpaII	CCGG	2 cut(s)	1846, 1979
HphI	GGTGA	5 cut(s)	11, 100, 329, 1812, 1851
Hpy166II	GTNNAC	4 cut(s)	555, 955, 990, 1064
Hpy8I	GTNNAC	4 cut(s)	555, 955, 990, 1064
HpyAV	CCTTC	7 cut(s)	29, 260, 346, 574, 810, 896, 1006
HpyCH4III	ACNGT	2 cut(s)	403, 425
HpyCH4IV	ACGT	1 cut(s)	2103
HpySE526I	ACGT	1 cut(s)	2103
Hsp92I	GRCGYC	1 cut(s)	1354
Hsp92II	CATG	7 cut(s)	410, 844, 907, 1073, 1413, 1432, 1870
HspAI	GCGC	1 cut(s)	1354
KasI	GGCGCC	1 cut(s)	1353
Ksp22I	TGATCA	1 cut(s)	778
KspI	CCGCGG	1 cut(s)	725
Kzo9I	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
LguI	GCTCTTC	3 cut(s)	997, 1200, 1204
LmnI	GCTCC	4 cut(s)	38, 412, 976, 1041
Lsp1109I	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2073
LweI	GCATC	4 cut(s)	967, 1432, 1930, 2063
MaeI	CTAG	3 cut(s)	710, 1836, 2030
MaeII	ACGT	1 cut(s)	2103
MaeIII	GTNAC	1 cut(s)	419
MalI	GATC	8 cut(s)	780, 864, 1254, 1290, 1641, 1677, 1701, 1858
MbiI	CCGCTC	1 cut(s)	858
MboI	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
MflI	RGATCY	1 cut(s)	862
MhlI	GDGCHC	4 cut(s)	43, 178, 1047, 1773
Mly113I	GGCGCC	1 cut(s)	1354
MlyI	GAGTC	5 cut(s)	427, 1059, 1343, 2051, 2072
Mph1103I	ATGCAT	1 cut(s)	2056
MroXI	GAANNNNTTC	2 cut(s)	762, 1194
MseI	TTAA	4 cut(s)	471, 873, 1125, 1487
MslI	CAYNNNNRTG	3 cut(s)	525, 1101, 1433
MspA1I	CMGCKG	1 cut(s)	724
MspI	CCGG	2 cut(s)	1846, 1979
MspR9I	CCNGG	6 cut(s)	1059, 1512, 1610, 1666, 1847, 1879
Mva1269I	GAATGC	3 cut(s)	667, 1613, 1669
MvaI	CCWGG	5 cut(s)	1059, 1512, 1610, 1666, 1879
MvnI	CGCG	1 cut(s)	724
NarI	GGCGCC	1 cut(s)	1354
NciI	CCSGG	1 cut(s)	1847
NdeII	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
NheI	GCTAGC	1 cut(s)	1835
NlaIII	CATG	7 cut(s)	410, 844, 907, 1073, 1413, 1432, 1870
NlaIV	GGNNCC	6 cut(s)	40, 103, 486, 972, 1037, 1355
NmuCI	GTSAC	1 cut(s)	419
NsiI	ATGCAT	1 cut(s)	2056
NspI	RCATGY	1 cut(s)	907
OliI	CACNNNNGTG	1 cut(s)	1101
PagI	TCATGA	2 cut(s)	840, 1866
PaqCI	CACCTGC	1 cut(s)	1831
PciSI	GCTCTTC	3 cut(s)	997, 1200, 1204
PcsI	WCGNNNNNNNCGW	1 cut(s)	1902
PctI	GAATGC	3 cut(s)	667, 1613, 1669
PdmI	GAANNNNTTC	2 cut(s)	762, 1194
PfeI	GAWTC	6 cut(s)	180, 254, 1178, 1546, 1982, 2015
PflMI	CCANNNNNTGG	1 cut(s)	1205
PkrI	GCNGC	5 cut(s)	277, 603, 1095, 1132, 2063
PleI	GAGTC	5 cut(s)	426, 1059, 1342, 2050, 2072
PluTI	GGCGCC	1 cut(s)	1357
PpsI	GAGTC	5 cut(s)	426, 1059, 1342, 2050, 2072
PpuMI	RGGWCCY	2 cut(s)	8, 101
Psp124BI	GAGCTC	1 cut(s)	178
Psp5II	RGGWCCY	2 cut(s)	8, 101
Psp6I	CCWGG	5 cut(s)	1057, 1510, 1608, 1664, 1877
PspFI	CCCAGC	2 cut(s)	880, 2065
PspGI	CCWGG	5 cut(s)	1057, 1510, 1608, 1664, 1877
PspN4I	GGNNCC	6 cut(s)	40, 103, 486, 972, 1037, 1355
PspPI	GGNCC	2 cut(s)	8, 101
PspPPI	RGGWCCY	2 cut(s)	8, 101
PsrI	GAACNNNNNNTAC	2 cut(s)	1899, 1931
PstNI	CAGNNNCTG	2 cut(s)	569, 980
PsuI	RGATCY	1 cut(s)	862
RsaI	GTAC	7 cut(s)	59, 152, 496, 643, 1078, 1553, 1760
RsaNI	GTAC	7 cut(s)	58, 151, 495, 642, 1077, 1552, 1759
RseI	CAYNNNNRTG	3 cut(s)	525, 1101, 1433
SacI	GAGCTC	1 cut(s)	178
SacII	CCGCGG	1 cut(s)	725
SapI	GCTCTTC	3 cut(s)	997, 1200, 1204
SaqAI	TTAA	4 cut(s)	471, 873, 1125, 1487
SatI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2062
Sau3AI	GATC	8 cut(s)	778, 862, 1252, 1288, 1639, 1675, 1699, 1856
Sau96I	GGNCC	2 cut(s)	8, 101
SchI	GAGTC	5 cut(s)	427, 1059, 1343, 2051, 2072
ScrFI	CCNGG	6 cut(s)	1059, 1512, 1610, 1666, 1847, 1879
SduI	GDGCHC	4 cut(s)	43, 178, 1047, 1773
SfaNI	GCATC	4 cut(s)	967, 1432, 1930, 2063
SfcI	CTRYAG	2 cut(s)	399, 1311
SfoI	GGCGCC	1 cut(s)	1355
Sfr303I	CCGCGG	1 cut(s)	725
SgrBI	CCGCGG	1 cut(s)	725
SinI	GGWCC	2 cut(s)	8, 101
SmiMI	CAYNNNNRTG	3 cut(s)	525, 1101, 1433
SmlI	CTYRAG	3 cut(s)	68, 1601, 1777
SmoI	CTYRAG	3 cut(s)	68, 1601, 1777
SsiI	CCGC	3 cut(s)	722, 724, 856
SspDI	GGCGCC	1 cut(s)	1353
SspI	AATATT	1 cut(s)	918
SspMI	CTAG	3 cut(s)	710, 1836, 2030
SstI	GAGCTC	1 cut(s)	178
StyD4I	CCNGG	6 cut(s)	1057, 1510, 1608, 1664, 1845, 1877
StyI	CCWWGG	1 cut(s)	958
TaaI	ACNGT	2 cut(s)	403, 425
TaiI	ACGT	1 cut(s)	2106
TaqI	TCGA	6 cut(s)	178, 659, 1167, 1237, 1533, 1831
TaqII	GACCGA	1 cut(s)	1937
TatI	WGTACW	4 cut(s)	150, 641, 1076, 1551
TfiI	GAWTC	6 cut(s)	180, 254, 1178, 1546, 1982, 2015
Tru1I	TTAA	4 cut(s)	471, 873, 1125, 1487
Tru9I	TTAA	4 cut(s)	471, 873, 1125, 1487
TscAI	CASTG	3 cut(s)	408, 505, 1773
TseFI	GTSAC	1 cut(s)	419
TseI	GCWGC	5 cut(s)	275, 601, 1093, 1130, 2061
Tsp45I	GTSAC	1 cut(s)	419
TspDTI	ATGAA	6 cut(s)	248, 315, 593, 1086, 1236, 1855
TspGWI	ACGGA	3 cut(s)	837, 1746, 1911
TspRI	CASTG	3 cut(s)	408, 505, 1773
Van91I	CCANNNNNTGG	1 cut(s)	1205
VpaK11BI	GGWCC	2 cut(s)	8, 101
XapI	RAATTY	1 cut(s)	963
XceI	RCATGY	1 cut(s)	907
XmiI	GTMKAC	1 cut(s)	554
XmnI	GAANNNNTTC	2 cut(s)	762, 1194
XspI	CTAG	3 cut(s)	710, 1836, 2030
Zsp2I	ATGCAT	1 cut(s)	2056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.