Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0012828

Physical Location & Seq

Genomic Coordinates Reverse (-)

37698167 .. 37701202

Gene Structure 3036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00415540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGAAGGACCTTTCACTCACCAAGAGGAAAGAGAAGGAGCCCATCTACAAAACCAGTACCAACAGCTCAAGCTTTGTCTGCCATTGGTGAGGTTCAGAGGCCCCAATATCCAGAACCCAGTTTCCATATTTGGGTTTTGCCTGTCCAAGTACATAAGAAGCCTCTATTCCAGAGCTCGAATCTCTAACTCTTGTTGCTTGGGGAGGCTGACTTACAATGGTATGGTAGTGATGAACAACTCTGCATTTTGTGATTCAACTGAAGAAGGAATAGCTGCAATGGAAAGCGAGGGGCTTGATGAAATTGTGGGTAAAGGTGAGACCTTTGCGGAGTTGATTGAGATTGAGGAGAAGGGTCGTGAGAGCTGTTCAAGTTCAGATTTTTTGACATCTGAGACTACAGTGCATGAGGAGCAGAGTCACAGTAGCTCTGAGGAGTCATCTTCTCCACCCTCATTGGGGTGGCCTGTTAAGAAATCTGAGGCACCAGATTGTACCAGTGAGAATCGGGCTGAAGCTCATTTGGATGATAGGAAATTACAGAAACAAGGGTCTACAATCTCAGAGACTGAGTTGATGAAGGAGAGGTTTTCGAAATTGCTGCTTGGAGAAGATATGTCAGGTTGTGGAAATGGGGTTTGTACAGCATTGGCTATATCGAATGCGATTACTAATCTTTGTGCAACCCTATTTGGGCAACTTTGGAGGCTAGAACCTCTACCGCGGGAGAAGAAATTGATGTGGCGAAGAGAGATGGAATGGCTTCTTTGTGTGAGTGATCACATTGTTGAGTTGAAACCTTCTTGGCAGACATTTCCAGACGGAAGCAAATTGGAGGTCATGAGTTGCAGACCTCGCTCAGATCTTTATGTTAATCTCCCAGCCCTTCGCAAATTGGATAACATGCTTCTTGAAATATTAGATGGTTTTGACGAGACAGAGTTCTGGTATGTTGACCAAGGAATTCTGGCTCCAGATGCTGATGGGTCAACCTCCTTCCGAAGAGCATTTCAGCGCCAAGAAGAGAAGTGGTGGCTTCCTGTGCCCCGAGTTCCTCCTGGTGGACTCCATGAAAGTACAAGAAAGCAAGTGCAGCACAAGCGTGATTGCACAAATCAAATACTTAAAGCTGCAATGGCAATCAATAGTATCACTTTAGCTGATATCGAAGTCCCTGAATCATATCTGGAAGCTCTTCCAAAGAATGGAAGAGCAAGCTTAGGGGATGTTATTTATCGATATATTTCATCAGATCAATTCTCCCCTGAATGTCTACTTGATTGCCTTGATCTGTCCTCTGAACACCAAGCTATAGAGATTGCCAACAGAGTTGAGTCCTCAATCTACTTGTGGCGCCAAAAGACAAACTCAAAACCTAAAAATAACAATACCAGAAATAGTTCAAAGTCATCATGGGAAATGGTCAAGGACATGATGGTGGTTGATGCAGATAAAAGGGAATTACTTGCAGAAAGAGCAGAAAGTCTCTTAATTTGTTTGAAGCAACGCTTCCCGGATGTTGGGAAATCCATCTTGGAGAGTTATTCAAGGGTTCTTGAGAGCCTGGCATTCAACATTGTGGCACGCATTGATGATCTGCTTTATGTAGATGACTTGACCAGGCATTCAGATCAGTTCCCATCAAGGCACTCCGATCAGTTCCCATCAATCTCCAAAGTTAGTGTGATTTCACACAAGGCAACTCCTATTCCGTACTCATCAGTGCCCATCTCAAGCACTCCATATAAAACAGCTTATGCCACACCAAGCTTTTCACCTGCACAGCGAGCTAGCCCTCTCCGGGTAGAACGATCACCATTCACGACCAATGCCAGGATTTCTCCTCAGCGCGGATTGGGCGTAAAGAAAGTTCTGACCGATTATCTTAGCATTGATGCAAAAGGAAAGAATTACAGCAACTCAACTGAGACACCGGATTCAGCCTCGGACACAATGCAAACAACTCTTGGATCTCAAATGGGACTAGGTTCTTTTGAGTCTTCAAATGCATCAAGCAGCCCAGCAACTCAGGACTCGGACACACAAGAAAGAACCCACGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

687

Amino Acids

77.01

Weight (kDa)

5.43

Isoelectric Point (pI)

56.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	188 - 541	9.7e-165	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02010
fragaria_vesca	FvH4_6g12700
malus_domestica	MD04G1139300.v1.1 MD12G1155100.v1.1
prunus_persica	Prupe.6G264800_v2.0.a1
pyrus_communis	pycom04g12750 pycom12g14720
rosa_chinensis	RchiOBHm_Chr3g0464551
rosa_laevigata	RLG00000024683
rosa_multiflora	Rmu_sc0002031.1_g000015 Rmu_sc0014550.1_g000001 Rmu_sc0042806.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415540
rosa_rugosa	Rorug03G0073100
rosa_samantha	Rh3BG135300 Rh3CG138000 Rh3DG136900
rosa_wichuraiana	Rw3G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1786
Acc36I	ACCTGC	1 cut(s)	1786
AccB1I	GGYRCC	2 cut(s)	484, 1353
AccB7I	CCANNNNNTGG	1 cut(s)	1205
AccI	GTMKAC	2 cut(s)	554, 1273
AccII	CGCG	2 cut(s)	724, 1851
AciI	CCGC	4 cut(s)	329, 722, 724, 1851
AclWI	GGATC	1 cut(s)	1978
AcsI	RAATTY	1 cut(s)	963
AcuI	CTGAAG	2 cut(s)	282, 534
AcyI	GRCGYC	1 cut(s)	1354
AfaI	GTAC	6 cut(s)	59, 152, 496, 643, 1078, 1715
AgsI	TTSAA	9 cut(s)	258, 372, 796, 914, 1404, 1501, 1548, 1573, 2004
AjnI	CCWGG	4 cut(s)	1057, 1563, 1619, 1832
AjuI	GAANNNNNNNTTGG	2 cut(s)	1517, 1549
AleI	CACNNNNGTG	1 cut(s)	1101
AloI	GAACNNNNNNTCC	2 cut(s)	107, 139
Alw21I	GWGCWC	1 cut(s)	178
Alw26I	GTCTC	6 cut(s)	314, 389, 560, 929, 1490, 1922
AlwI	GGATC	1 cut(s)	1978
AlwNI	CAGNNNCTG	2 cut(s)	569, 980
Ama87I	CYCGRG	1 cut(s)	1047
AoxI	GGCC	2 cut(s)	100, 464
ApeKI	GCWGC	5 cut(s)	275, 601, 1093, 1130, 2016
ApoI	RAATTY	1 cut(s)	963
ArsI	GACNNNNNNTTYG	2 cut(s)	822, 854
Asp700I	GAANNNNTTC	3 cut(s)	762, 1194, 1399
AspLEI	GCGC	3 cut(s)	1017, 1356, 1851
AspS9I	GGNCC	2 cut(s)	8, 101
AsuC2I	CCSGG	2 cut(s)	1514, 1802
AsuHPI	GGTGA	5 cut(s)	11, 100, 329, 1767, 1806
AsuII	TTCGAA	1 cut(s)	593
AsuNHI	GCTAGC	1 cut(s)	1790
AvaI	CYCGRG	1 cut(s)	1047
AvaII	GGWCC	1 cut(s)	8
BaeGI	GKGCMC	2 cut(s)	1047, 1728
BanI	GGYRCC	2 cut(s)	484, 1353
BanII	GRGCYC	2 cut(s)	43, 178
BbsI	GAAGAC	1 cut(s)	1992
Bbv12I	GWGCWC	1 cut(s)	178
BbvCI	CCTCAGC	1 cut(s)	1845
BbvI	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2028
BccI	CCATC	9 cut(s)	51, 748, 917, 977, 1429, 1538, 1648, 1672, 1736
BcgI	CGANNNNNNTGC	2 cut(s)	583, 617
BciT130I	CCWGG	4 cut(s)	1059, 1565, 1621, 1834
BclI	TGATCA	1 cut(s)	778
BcnI	CCSGG	2 cut(s)	1514, 1802
BcoDI	GTCTC	6 cut(s)	314, 389, 560, 929, 1490, 1922
BfaI	CTAG	3 cut(s)	710, 1791, 1985
BfmI	CTRYAG	2 cut(s)	399, 1311
BfoI	RGCGCY	2 cut(s)	1018, 1357
BfuAI	ACCTGC	1 cut(s)	1786
BglII	AGATCT	1 cut(s)	862
BisI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2017
BlsI	GCNGC	5 cut(s)	277, 603, 1095, 1132, 2018
Bme1390I	CCNGG	6 cut(s)	1059, 1514, 1565, 1621, 1802, 1834
Bme18I	GGWCC	1 cut(s)	8
BmeT110I	CYCGRG	1 cut(s)	1047
BmgT120I	GGNCC	2 cut(s)	8, 101
BmiI	GGNNCC	5 cut(s)	40, 103, 486, 972, 1355
BmrFI	CCNGG	6 cut(s)	1059, 1514, 1565, 1621, 1802, 1834
BmrI	ACTGGG	1 cut(s)	113
BmsI	GCATC	4 cut(s)	967, 1435, 1885, 2018
BmtI	GCTAGC	1 cut(s)	1794
BmuI	ACTGGG	1 cut(s)	113
BpiI	GAAGAC	1 cut(s)	1992
BpmI	CTGGAG	1 cut(s)	957
Bpu10I	CCTNAGC	2 cut(s)	1219, 1845
Bpu14I	TTCGAA	1 cut(s)	593
BpuEI	CTTGAG	3 cut(s)	53, 1577, 1717
BpuMI	CCSGG	2 cut(s)	1514, 1802
Bsa29I	ATCGAT	1 cut(s)	1237
BsaHI	GRCGYC	1 cut(s)	1354
BsaI	GGTCTC	1 cut(s)	314
BsaJI	CCNNGG	3 cut(s)	722, 958, 1944
BsaWI	WCCGGW	1 cut(s)	1933
Bse1I	ACTGG	3 cut(s)	55, 119, 498
Bse3DI	GCAATG	2 cut(s)	285, 1140
BseBI	CCWGG	4 cut(s)	1059, 1565, 1621, 1834
BseCI	ATCGAT	1 cut(s)	1237
BseDI	CCNNGG	3 cut(s)	722, 958, 1944
BseGI	GGATG	3 cut(s)	532, 1231, 1522
BseMI	GCAATG	2 cut(s)	285, 1140
BseMII	CTCAG	9 cut(s)	384, 423, 471, 561, 576, 873, 1859, 1917, 2042
BseNI	ACTGG	3 cut(s)	55, 119, 498
BseRI	GAGGAG	4 cut(s)	362, 425, 449, 1833
BseSI	GKGCMC	2 cut(s)	1047, 1728
BseXI	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2028
BseYI	CCCAGC	2 cut(s)	880, 2020
BsgI	GTGCAG	2 cut(s)	1112, 1764
Bsh1236I	CGCG	2 cut(s)	724, 1851
BshFI	GGCC	2 cut(s)	102, 466
BshNI	GGYRCC	2 cut(s)	484, 1353
BshVI	ATCGAT	1 cut(s)	1237
BsiHKAI	GWGCWC	1 cut(s)	178
BsiHKCI	CYCGRG	1 cut(s)	1047
BsiSI	CCGG	3 cut(s)	1514, 1801, 1934
BslFI	GGGAC	2 cut(s)	1157, 1995
BsmAI	GTCTC	6 cut(s)	314, 389, 560, 929, 1490, 1922
BsmFI	GGGAC	2 cut(s)	1157, 1995
BsmI	GAATGC	3 cut(s)	667, 1568, 1624
BsnI	GGCC	2 cut(s)	102, 466
Bso31I	GGTCTC	1 cut(s)	314
BsoBI	CYCGRG	1 cut(s)	1047
Bsp119I	TTCGAA	1 cut(s)	593
Bsp1286I	GDGCHC	4 cut(s)	43, 178, 1047, 1728
Bsp1407I	TGTACA	1 cut(s)	641
Bsp143I	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
BspACI	CCGC	4 cut(s)	329, 722, 724, 1851
BspANI	GGCC	2 cut(s)	102, 466
BspCNI	CTCAG	9 cut(s)	385, 424, 472, 562, 575, 872, 1858, 1918, 2041
BspDI	ATCGAT	1 cut(s)	1237
BspFNI	CGCG	2 cut(s)	724, 1851
BspHI	TCATGA	1 cut(s)	840
BspLI	GGNNCC	5 cut(s)	40, 103, 486, 972, 1355
BspMI	ACCTGC	1 cut(s)	1786
BspOI	GCTAGC	1 cut(s)	1794
BspPI	GGATC	1 cut(s)	1978
BspQI	GCTCTTC	3 cut(s)	997, 1200, 1204
BspT104I	TTCGAA	1 cut(s)	593
BspT107I	GGYRCC	2 cut(s)	484, 1353
BspTNI	GGTCTC	1 cut(s)	314
BsrDI	GCAATG	2 cut(s)	285, 1140
BsrGI	TGTACA	1 cut(s)	641
BsrI	ACTGG	3 cut(s)	55, 119, 498
BssECI	CCNNGG	3 cut(s)	722, 958, 1944
BssMI	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
BssNI	GRCGYC	1 cut(s)	1354
BssT1I	CCWWGG	1 cut(s)	958
Bst2UI	CCWGG	4 cut(s)	1059, 1565, 1621, 1834
Bst4CI	ACNGT	2 cut(s)	403, 425
Bst6I	CTCTTC	5 cut(s)	742, 997, 1017, 1200, 1204
BstACI	GRCGYC	1 cut(s)	1354
BstAUI	TGTACA	1 cut(s)	641
BstBI	TTCGAA	1 cut(s)	593
BstC8I	GCNNGC	4 cut(s)	1216, 1585, 1788, 1792
BstDSI	CCRYGG	1 cut(s)	722
BstF5I	GGATG	3 cut(s)	532, 1231, 1522
BstFNI	CGCG	2 cut(s)	724, 1851
BstH2I	RGCGCY	2 cut(s)	1018, 1357
BstHHI	GCGC	3 cut(s)	1017, 1356, 1851
BstKTI	GATC	9 cut(s)	781, 865, 1255, 1291, 1597, 1633, 1657, 1814, 1973
BstMAI	GTCTC	6 cut(s)	314, 389, 560, 929, 1490, 1922
BstMBI	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
BstNI	CCWGG	4 cut(s)	1059, 1565, 1621, 1834
BstNSI	RCATGY	1 cut(s)	907
BstSCI	CCNGG	6 cut(s)	1057, 1512, 1563, 1619, 1800, 1832
BstSFI	CTRYAG	2 cut(s)	399, 1311
BstSLI	GKGCMC	2 cut(s)	1047, 1728
BstUI	CGCG	2 cut(s)	724, 1851
BstV1I	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2028
BstV2I	GAAGAC	1 cut(s)	1992
BstX2I	RGATCY	2 cut(s)	862, 1970
BstYI	RGATCY	2 cut(s)	862, 1970
Bsu15I	ATCGAT	1 cut(s)	1237
BsuRI	GGCC	2 cut(s)	102, 466
BsuTUI	ATCGAT	1 cut(s)	1237
BtgI	CCRYGG	1 cut(s)	722
BtsCI	GGATG	3 cut(s)	532, 1231, 1522
BtsIMutI	CAGTG	3 cut(s)	408, 505, 1728
BveI	ACCTGC	1 cut(s)	1786
Cac8I	GCNNGC	4 cut(s)	1216, 1585, 1788, 1792
CaiI	CAGNNNCTG	2 cut(s)	569, 980
CciI	TCATGA	1 cut(s)	840
CfoI	GCGC	3 cut(s)	1017, 1356, 1851
Cfr13I	GGNCC	2 cut(s)	8, 101
Cfr42I	CCGCGG	1 cut(s)	725
ClaI	ATCGAT	1 cut(s)	1237
Csp6I	GTAC	6 cut(s)	58, 151, 495, 642, 1077, 1714
CspCI	CAANNNNNGTGG	2 cut(s)	438, 473
CviAII	CATG	6 cut(s)	407, 841, 904, 1070, 1413, 1432
CviQI	GTAC	6 cut(s)	58, 151, 495, 642, 1077, 1714
DinI	GGCGCC	1 cut(s)	1355
DpnI	GATC	9 cut(s)	780, 864, 1254, 1290, 1596, 1632, 1656, 1813, 1972
DpnII	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
Eam1104I	CTCTTC	5 cut(s)	742, 997, 1017, 1200, 1204
EarI	CTCTTC	5 cut(s)	742, 997, 1017, 1200, 1204
Ecl136II	GAGCTC	1 cut(s)	176
Eco130I	CCWWGG	1 cut(s)	958
Eco24I	GRGCYC	2 cut(s)	43, 178
Eco31I	GGTCTC	1 cut(s)	314
Eco32I	GATATC	1 cut(s)	1165
Eco47I	GGWCC	1 cut(s)	8
Eco53kI	GAGCTC	1 cut(s)	176
Eco57I	CTGAAG	2 cut(s)	282, 534
Eco88I	CYCGRG	1 cut(s)	1047
EcoICRI	GAGCTC	1 cut(s)	176
EcoO109I	RGGNCCY	2 cut(s)	8, 101
EcoRI	GAATTC	1 cut(s)	963
EcoRII	CCWGG	4 cut(s)	1057, 1563, 1619, 1832
EcoRV	GATATC	1 cut(s)	1165
EcoT14I	CCWWGG	1 cut(s)	958
EcoT22I	ATGCAT	1 cut(s)	2011
EcoT38I	GRGCYC	2 cut(s)	43, 178
EgeI	GGCGCC	1 cut(s)	1355
EheI	GGCGCC	1 cut(s)	1355
ErhI	CCWWGG	1 cut(s)	958
FaeI	CATG	6 cut(s)	410, 844, 907, 1073, 1416, 1435
FalI	AAGNNNNNCTT	2 cut(s)	1493, 1525
FaqI	GGGAC	2 cut(s)	1157, 1995
FatI	CATG	6 cut(s)	406, 840, 903, 1069, 1412, 1431
FauI	CCCGC	1 cut(s)	717
FbaI	TGATCA	1 cut(s)	778
FblI	GTMKAC	2 cut(s)	554, 1273
Fnu4HI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2017
FokI	GGATG	3 cut(s)	539, 1238, 1529
FriOI	GRGCYC	2 cut(s)	43, 178
Fsp4HI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2017
FspBI	CTAG	3 cut(s)	710, 1791, 1985
GlaI	GCGC	3 cut(s)	1016, 1355, 1850
GluI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2017
GsaI	CCCAGC	2 cut(s)	884, 2024
GsuI	CTGGAG	1 cut(s)	957
HaeII	RGCGCY	2 cut(s)	1018, 1357
HaeIII	GGCC	2 cut(s)	102, 466
HapII	CCGG	3 cut(s)	1514, 1801, 1934
HhaI	GCGC	3 cut(s)	1017, 1356, 1851
Hin1I	GRCGYC	1 cut(s)	1354
Hin1II	CATG	6 cut(s)	410, 844, 907, 1073, 1416, 1435
Hin6I	GCGC	3 cut(s)	1015, 1354, 1849
HinP1I	GCGC	3 cut(s)	1015, 1354, 1849
HincII	GTYRAC	2 cut(s)	955, 990
HindII	GTYRAC	2 cut(s)	955, 990
HindIII	AAGCTT	3 cut(s)	71, 1216, 1768
HpaII	CCGG	3 cut(s)	1514, 1801, 1934
HphI	GGTGA	5 cut(s)	11, 100, 329, 1767, 1806
Hpy166II	GTNNAC	5 cut(s)	555, 955, 990, 1064, 1274
Hpy8I	GTNNAC	5 cut(s)	555, 955, 990, 1064, 1274
HpyAV	CCTTC	7 cut(s)	29, 260, 346, 574, 810, 896, 1006
HpyCH4III	ACNGT	2 cut(s)	403, 425
HpyCH4IV	ACGT	1 cut(s)	2058
HpySE526I	ACGT	1 cut(s)	2058
Hsp92I	GRCGYC	1 cut(s)	1354
Hsp92II	CATG	6 cut(s)	410, 844, 907, 1073, 1416, 1435
HspAI	GCGC	3 cut(s)	1015, 1354, 1849
KasI	GGCGCC	1 cut(s)	1353
Ksp22I	TGATCA	1 cut(s)	778
KspI	CCGCGG	1 cut(s)	725
Kzo9I	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
LguI	GCTCTTC	3 cut(s)	997, 1200, 1204
LmnI	GCTCC	3 cut(s)	38, 412, 976
Lsp1109I	GCAGC	5 cut(s)	262, 588, 1105, 1117, 2028
LweI	GCATC	4 cut(s)	967, 1435, 1885, 2018
MaeI	CTAG	3 cut(s)	710, 1791, 1985
MaeII	ACGT	1 cut(s)	2058
MaeIII	GTNAC	1 cut(s)	419
MalI	GATC	9 cut(s)	780, 864, 1254, 1290, 1596, 1632, 1656, 1813, 1972
MboI	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
MflI	RGATCY	2 cut(s)	862, 1970
MhlI	GDGCHC	4 cut(s)	43, 178, 1047, 1728
Mly113I	GGCGCC	1 cut(s)	1354
MlyI	GAGTC	6 cut(s)	427, 446, 1059, 1343, 2006, 2027
Mph1103I	ATGCAT	1 cut(s)	2011
MroXI	GAANNNNTTC	3 cut(s)	762, 1194, 1399
MseI	TTAA	4 cut(s)	471, 873, 1125, 1490
MslI	CAYNNNNRTG	4 cut(s)	460, 525, 1101, 1436
MspA1I	CMGCKG	1 cut(s)	724
MspI	CCGG	3 cut(s)	1514, 1801, 1934
MspR9I	CCNGG	6 cut(s)	1059, 1514, 1565, 1621, 1802, 1834
Mva1269I	GAATGC	3 cut(s)	667, 1568, 1624
MvaI	CCWGG	4 cut(s)	1059, 1565, 1621, 1834
MvnI	CGCG	2 cut(s)	724, 1851
NarI	GGCGCC	1 cut(s)	1354
NciI	CCSGG	2 cut(s)	1514, 1802
NdeII	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
NheI	GCTAGC	1 cut(s)	1790
NlaIII	CATG	6 cut(s)	410, 844, 907, 1073, 1416, 1435
NlaIV	GGNNCC	5 cut(s)	40, 103, 486, 972, 1355
NmuCI	GTSAC	1 cut(s)	419
NsiI	ATGCAT	1 cut(s)	2011
NspI	RCATGY	1 cut(s)	907
NspV	TTCGAA	1 cut(s)	593
OliI	CACNNNNGTG	1 cut(s)	1101
PagI	TCATGA	1 cut(s)	840
PaqCI	CACCTGC	1 cut(s)	1786
PciSI	GCTCTTC	3 cut(s)	997, 1200, 1204
PctI	GAATGC	3 cut(s)	667, 1568, 1624
PdmI	GAANNNNTTC	3 cut(s)	762, 1194, 1399
PfeI	GAWTC	5 cut(s)	180, 254, 505, 1178, 1937
PflMI	CCANNNNNTGG	1 cut(s)	1205
PfoI	TCCNGGA	1 cut(s)	1512
PkrI	GCNGC	5 cut(s)	277, 603, 1095, 1132, 2018
PleI	GAGTC	6 cut(s)	426, 445, 1059, 1342, 2005, 2027
PluTI	GGCGCC	1 cut(s)	1357
PpsI	GAGTC	6 cut(s)	426, 445, 1059, 1342, 2005, 2027
PpuMI	RGGWCCY	1 cut(s)	8
Psp124BI	GAGCTC	1 cut(s)	178
Psp5II	RGGWCCY	1 cut(s)	8
Psp6I	CCWGG	4 cut(s)	1057, 1563, 1619, 1832
PspFI	CCCAGC	2 cut(s)	880, 2020
PspGI	CCWGG	4 cut(s)	1057, 1563, 1619, 1832
PspN4I	GGNNCC	5 cut(s)	40, 103, 486, 972, 1355
PspPI	GGNCC	2 cut(s)	8, 101
PspPPI	RGGWCCY	1 cut(s)	8
PsrI	GAACNNNNNNTAC	2 cut(s)	1854, 1886
PstNI	CAGNNNCTG	2 cut(s)	569, 980
PsuI	RGATCY	2 cut(s)	862, 1970
RsaI	GTAC	6 cut(s)	59, 152, 496, 643, 1078, 1715
RsaNI	GTAC	6 cut(s)	58, 151, 495, 642, 1077, 1714
RseI	CAYNNNNRTG	4 cut(s)	460, 525, 1101, 1436
SacI	GAGCTC	1 cut(s)	178
SacII	CCGCGG	1 cut(s)	725
SapI	GCTCTTC	3 cut(s)	997, 1200, 1204
SaqAI	TTAA	4 cut(s)	471, 873, 1125, 1490
SatI	GCNGC	5 cut(s)	276, 602, 1094, 1131, 2017
Sau3AI	GATC	9 cut(s)	778, 862, 1252, 1288, 1594, 1630, 1654, 1811, 1970
Sau96I	GGNCC	2 cut(s)	8, 101
SchI	GAGTC	6 cut(s)	427, 446, 1059, 1343, 2006, 2027
ScrFI	CCNGG	6 cut(s)	1059, 1514, 1565, 1621, 1802, 1834
SduI	GDGCHC	4 cut(s)	43, 178, 1047, 1728
SfaNI	GCATC	4 cut(s)	967, 1435, 1885, 2018
SfcI	CTRYAG	2 cut(s)	399, 1311
SfoI	GGCGCC	1 cut(s)	1355
Sfr303I	CCGCGG	1 cut(s)	725
SfuI	TTCGAA	1 cut(s)	593
SgrBI	CCGCGG	1 cut(s)	725
SinI	GGWCC	1 cut(s)	8
SmiMI	CAYNNNNRTG	4 cut(s)	460, 525, 1101, 1436
SmlI	CTYRAG	3 cut(s)	68, 1556, 1732
SmoI	CTYRAG	3 cut(s)	68, 1556, 1732
SsiI	CCGC	4 cut(s)	329, 722, 724, 1851
SspDI	GGCGCC	1 cut(s)	1353
SspI	AATATT	1 cut(s)	918
SspMI	CTAG	3 cut(s)	710, 1791, 1985
SstI	GAGCTC	1 cut(s)	178
StyD4I	CCNGG	6 cut(s)	1057, 1512, 1563, 1619, 1800, 1832
StyI	CCWWGG	1 cut(s)	958
TaaI	ACNGT	2 cut(s)	403, 425
TaiI	ACGT	1 cut(s)	2061
TaqI	TCGA	5 cut(s)	178, 593, 659, 1167, 1237
TaqII	GACCGA	1 cut(s)	1892
TatI	WGTACW	3 cut(s)	150, 641, 1076
TfiI	GAWTC	5 cut(s)	180, 254, 505, 1178, 1937
Tru1I	TTAA	4 cut(s)	471, 873, 1125, 1490
Tru9I	TTAA	4 cut(s)	471, 873, 1125, 1490
TscAI	CASTG	3 cut(s)	408, 505, 1728
TseFI	GTSAC	1 cut(s)	419
TseI	GCWGC	5 cut(s)	275, 601, 1093, 1130, 2016
Tsp45I	GTSAC	1 cut(s)	419
TspDTI	ATGAA	5 cut(s)	248, 315, 593, 1086, 1236
TspGWI	ACGGA	2 cut(s)	837, 1701
TspRI	CASTG	3 cut(s)	408, 505, 1728
Van91I	CCANNNNNTGG	1 cut(s)	1205
VpaK11BI	GGWCC	1 cut(s)	8
XapI	RAATTY	1 cut(s)	963
XceI	RCATGY	1 cut(s)	907
XmiI	GTMKAC	2 cut(s)	554, 1273
XmnI	GAANNNNTTC	3 cut(s)	762, 1194, 1399
XspI	CTAG	3 cut(s)	710, 1791, 1985
Zsp2I	ATGCAT	1 cut(s)	2011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.