Rmu_sc0002136.1_g000002

Transcription factor IIIC subunit delta N-term

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002136.1
OG0009196
Physical Location & Seq
Reverse (-)
4367 .. 10824
6458 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2847 bp
atgtctttctttccctccaattcccaactccaaaccgaaaactcaatttcacgcttccaggccgccgtcctcgtcggtgctccctcctaccccaacgccattgcctggtccgacgagaacctcatcgccgtcgcctccggccacctcgtcaccattctgaatccggcgacactgcctttcggaccaagaggtctcatcactatccaaaacggacctccctttccaattggtgtcatagatagacaagatttgttctctgattgcttgctgcctacgattatctcaagggaccatgaaccctgtgttcgatcaatttcgtggtctccggttgggcttgctccgaatgctggctgcttgctggctgtctgcacaacccaaggacttgtcaagctttaccgcccgccgtattgtgatttctgtgccgaatggatagaggttgcggatttatcagccaagctttatgattatcttgcgagtattagtttcggggaggtaccagattgttctttggtacggtgtgataaccgtgaaatagagcagggtggacaatctgtccctacaaaggagggtaagagacgaaaagcaaacatatctggcaaaagctctagtaacccttattccaaacgctatggacaagaagtgcatacggagcttgacagtgactccgaccagatggaagaaaggagttcaactcagattgttccatcatcaaaatctaaagtaaaatctgtcaagaagatacaagaaaactctaccctccctcaaataactgtggatcaatatgcgactcgtagtgcaatgctatcatcgcttgtagttgcttggtcaccgatactgcaatcacgtgccaaaatcagttcaagtcctcaacatggttcatccctgtctttacttgcagtaggagggaagtcgggtcaagtttctgtatggagagtttctgtaccagagtgttattctgttgaccaaagccgggatccaactacgctgatgctcattcaaatcattcaggcgcacaattcatggatcacagcagttagttgggctttgcttgattctgattcgtcaaatcctcaatttctattggctacagcaagttataatggaagtttgaagatctggctggcatattatgaacaattgctaaagtcatcggaacctaataccacttccttttccttgttaaaggaggttggaactgttgatatggttccagtttcagcgctttcagttactgtgcctgctcagtgtccacagacaatgcacttggcagttggcaaaggttctggcttttgtgaagtgtggatatgcaacatctctggccaaaaatttcataaaattagtccacatgatgggcattcccagattgataattttgtacgtggttggattctaaatggaagttccctgtgtgaagtacctattccttcaaatactcctggtctgagaagctcgactgatcttccagaaggatttgtttcttgctttggtgtggcagtatcccctggaaatgttgcaattgcgtgggttcgtaatactgatgttgatcaattaaatccaatgtatgaggcaaggactcaaaaggccatcgtagagtttttctggatcgggggccagcaagttcatgttttgtcaaacaatttcctggatcgtgatactgaagctattcctggctcttctgagaaggaattggttgattgggaaaccaatattatatggtctttaaagcagtttgaaactcaggataagcctcttgttgtttgggatattgctacagcattattggcatttaggcgttctaaaccagagtatgtagatcgcgtagtgattaagtggctctctgtttcctctctgggatctgagttgaactcttctgctgaaaatgttctgttgtatgcctcccgaaatttttcaaaagtcacttctcgccaactacaccttctcaatataatctgtagacgcgtgatactatcggagatgaaggctgatgagataaacaacaaactgctgaacatggaaggagtggatggtgctgaagaagagcaactgactttgtggatcaatctgcttttgaacagtgaaagagaactccgtgagaggcttgtggggtttacattttcttctttcaaaagtcgaatgcttgcttcagccacaaattctcaatctagagattggtttcctgttgggctgacacaaatggagcagtgggttgagcttaaccaagatcatgtgcaggatcaactgagggtccttgcagcagaagttaggaagcatgagcagaggctccaattgagtaattccatagcagcagagaagtgtagctattgttcagcatcagttccattcgaatctccagaagttgccttctgcagcaaaggacacaaactagcaagagatgcacttgaaactgttggagttgttgtagatgatgaagatgtggtggttacagttctcagaggtttaccagctgaatttgcagccaaaaaaactataatcagagctcaatattgcaactcttcattggcaactctcaagaccctgcttaaagctgcagaagtggacattgagaatgagtctcaaaccaatactaactctaagactagacaactcacttgtgtcgacattaaactcaccaaccagagtcctcctgaccagcattggattgaccaagccaacactcgttgtgacctaaactcaaccaagtggattactggacactcagacctgggactaaaaaaccaacaccatcacctccctattgtcaacactatccatcccccgctgctccaaaatgccctcgcctctgacccgatcccagacaggaaggacccactagaaggccaaggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TFIIIC_delta WD40 zf-TFIIIC

Protein Analysis

948

Amino Acids

104.71

Weight (kDa)

5.7

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIIIC_delta PF12657 36 - 378 8.3e-18 Transcription factor IIIC subunit delta bet-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1098
AasI GACNNNNNNGTC 1 cut(s) 189
Acc65I GGTACC 1 cut(s) 493
AccB1I GGYRCC 1 cut(s) 493
AccB7I CCANNNNNTGG 2 cut(s) 105, 1349
AccI GTMKAC 2 cut(s) 1954, 2616
AccII CGCG 2 cut(s) 1818, 1959
AciI CCGC 5 cut(s) 63, 397, 401, 440, 2777
AcoI YGGCCR 2 cut(s) 139, 1318
AcsI RAATTY 4 cut(s) 1325, 1903, 2152, 2468
AcuI CTGAAG 3 cut(s) 1677, 2052, 2127
AcvI CACGTG 1 cut(s) 845
AfaI GTAC 5 cut(s) 495, 513, 942, 1377, 1416
AfeI AGCGCT 1 cut(s) 1221
AfiI CCNNNNNNNGG 7 cut(s) 105, 347, 562, 872, 970, 1349, 2834
AflIII ACRYGT 1 cut(s) 1957
AhdI GACNNNNNGTC 1 cut(s) 551
AjnI CCWGG 7 cut(s) 57, 104, 1435, 1501, 1641, 1666, 2721
AjuI GAANNNNNNNTTGG 2 cut(s) 1920, 1952
Alw21I GWGCWC 2 cut(s) 82, 2500
Alw26I GTCTC 4 cut(s) 197, 327, 568, 2577
AlwNI CAGNNNCTG 1 cut(s) 1232
Aor51HI AGCGCT 1 cut(s) 1221
AoxI GGCC 6 cut(s) 60, 139, 1318, 1581, 1609, 2836
ApeKI GCWGC 8 cut(s) 268, 351, 2252, 2303, 2367, 2474, 2546, 2779
ApoI RAATTY 4 cut(s) 1325, 1903, 2152, 2468
Asp700I GAANNNNTTC 3 cut(s) 1662, 1881, 1906
Asp718I GGTACC 1 cut(s) 493
AspLEI GCGC 2 cut(s) 1012, 1222
AspS9I GGNCC 7 cut(s) 108, 182, 212, 289, 1609, 2245, 2824
AsuC2I CCSGG 1 cut(s) 971
AsuHPI GGTGA 4 cut(s) 142, 819, 2620, 2738
AsuII TTCGAA 1 cut(s) 2343
AvaII GGWCC 6 cut(s) 108, 182, 212, 289, 2245, 2824
BalI TGGCCA 1 cut(s) 1320
BamHI GGATCC 1 cut(s) 973
BanI GGYRCC 1 cut(s) 493
BanII GRGCYC 1 cut(s) 2500
BbrPI CACGTG 1 cut(s) 845
Bbv12I GWGCWC 2 cut(s) 82, 2500
BbvI GCAGC 8 cut(s) 255, 338, 2264, 2315, 2379, 2486, 2533, 2766
BccI CCATC 7 cut(s) 667, 712, 1343, 1592, 2018, 2751, 2778
BceAI ACGGC 3 cut(s) 50, 113, 388
BciT130I CCWGG 7 cut(s) 59, 106, 1437, 1503, 1643, 1668, 2723
BciVI GTATCC 1 cut(s) 1507
BclI TGATCA 1 cut(s) 1543
BcnI CCSGG 1 cut(s) 971
BcoDI GTCTC 4 cut(s) 197, 327, 568, 2577
BfaI CTAG 5 cut(s) 606, 2163, 2384, 2598, 2831
BfmI CTRYAG 5 cut(s) 1086, 1770, 1951, 2365, 2547
BfoI RGCGCY 1 cut(s) 1223
BfuI GTATCC 1 cut(s) 1507
BglII AGATCT 1 cut(s) 1113
BisI GCNGC 9 cut(s) 63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
BlsI GCNGC 9 cut(s) 64, 270, 353, 2254, 2305, 2369, 2476, 2548, 2781
Bme1390I CCNGG 8 cut(s) 59, 106, 971, 1437, 1503, 1643, 1668, 2723
Bme18I GGWCC 6 cut(s) 108, 182, 212, 289, 2245, 2824
BmeRI GACNNNNNGTC 1 cut(s) 551
BmgT120I GGNCC 7 cut(s) 108, 182, 212, 289, 1609, 2245, 2824
BmiI GGNNCC 9 cut(s) 290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
BmrFI CCNGG 8 cut(s) 59, 106, 971, 1437, 1503, 1643, 1668, 2723
BmsI GCATC 3 cut(s) 978, 2339, 2383
BplI GAGNNNNNCTC 4 cut(s) 676, 708, 1850, 1882
BpmI CTGGAG 1 cut(s) 2334
Bpu14I TTCGAA 1 cut(s) 2343
BpuEI CTTGAG 2 cut(s) 268, 2513
BpuMI CCSGG 1 cut(s) 971
BsaAI YACGTR 2 cut(s) 845, 1379
BsaBI GATNNNNATC 1 cut(s) 1542
BsaI GGTCTC 2 cut(s) 197, 327
BsaJI CCNNGG 4 cut(s) 376, 1501, 2722, 2839
BsaWI WCCGGW 1 cut(s) 325
BsaXI ACNNNNNCTCC 4 cut(s) 647, 677, 2403, 2433
Bsc4I CCNNNNNNNGG 7 cut(s) 105, 347, 562, 872, 970, 1349, 2834
Bse1I ACTGG 2 cut(s) 1211, 2713
Bse3DI GCAATG 2 cut(s) 99, 804
Bse8I GATNNNNATC 1 cut(s) 1542
BseBI CCWGG 7 cut(s) 59, 106, 1437, 1503, 1643, 1668, 2723
BseDI CCNNGG 4 cut(s) 376, 1501, 2722, 2839
BseGI GGATG 3 cut(s) 878, 2029, 2770
BseJI GATNNNNATC 1 cut(s) 1542
BseLI CCNNNNNNNGG 7 cut(s) 105, 347, 562, 872, 970, 1349, 2834
BseMI GCAATG 2 cut(s) 99, 804
BseMII CTCAG 9 cut(s) 707, 1256, 1433, 1668, 1751, 1848, 2231, 2464, 2730
BseNI ACTGG 2 cut(s) 1211, 2713
BseXI GCAGC 8 cut(s) 255, 338, 2264, 2315, 2379, 2486, 2533, 2766
BsgI GTGCAG 2 cut(s) 352, 2249
Bsh1236I CGCG 2 cut(s) 1818, 1959
BshFI GGCC 6 cut(s) 62, 141, 1320, 1583, 1611, 2838
BshNI GGYRCC 1 cut(s) 493
BsiHKAI GWGCWC 2 cut(s) 82, 2500
BsiSI CCGG 4 cut(s) 138, 164, 326, 970
BslFI GGGAC 3 cut(s) 302, 539, 2739
BslI CCNNNNNNNGG 7 cut(s) 105, 347, 562, 872, 970, 1349, 2834
BsmAI GTCTC 4 cut(s) 197, 327, 568, 2577
BsmBI CGTCTC 1 cut(s) 568
BsmFI GGGAC 3 cut(s) 302, 539, 2739
BsmI GAATGC 3 cut(s) 349, 1354, 2139
BsnI GGCC 6 cut(s) 62, 141, 1320, 1583, 1611, 2838
Bso31I GGTCTC 2 cut(s) 197, 327
Bsp119I TTCGAA 1 cut(s) 2343
Bsp1286I GDGCHC 2 cut(s) 82, 2500
BspACI CCGC 5 cut(s) 63, 397, 401, 440, 2777
BspANI GGCC 6 cut(s) 62, 141, 1320, 1583, 1611, 2838
BspCNI CTCAG 9 cut(s) 706, 1255, 1434, 1669, 1750, 1849, 2232, 2463, 2729
BspFNI CGCG 2 cut(s) 1818, 1959
BspLI GGNNCC 9 cut(s) 290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
BspMAI CTGCAG 2 cut(s) 2369, 2551
BspQI GCTCTTC 2 cut(s) 1678, 2031
BspT104I TTCGAA 1 cut(s) 2343
BspT107I GGYRCC 1 cut(s) 493
BspTNI GGTCTC 2 cut(s) 197, 327
BsrDI GCAATG 2 cut(s) 99, 804
BsrI ACTGG 2 cut(s) 1211, 2713
BssECI CCNNGG 4 cut(s) 376, 1501, 2722, 2839
BssT1I CCWWGG 2 cut(s) 376, 2839
Bst2UI CCWGG 7 cut(s) 59, 106, 1437, 1503, 1643, 1668, 2723
Bst4CI ACNGT 9 cut(s) 516, 527, 659, 772, 1198, 1234, 2075, 2407, 2446
Bst6I CTCTTC 4 cut(s) 1678, 1873, 2031, 2518
BstAPI GCANNNNNTGC 1 cut(s) 2393
BstBAI YACGTR 2 cut(s) 845, 1379
BstBI TTCGAA 1 cut(s) 2343
BstEII GGTNACC 1 cut(s) 825
BstF5I GGATG 3 cut(s) 878, 2029, 2770
BstFNI CGCG 2 cut(s) 1818, 1959
BstH2I RGCGCY 1 cut(s) 1223
BstHHI GCGC 2 cut(s) 1012, 1222
BstMAI GTCTC 4 cut(s) 197, 327, 568, 2577
BstMWI GCNNNNNNNGC 6 cut(s) 344, 649, 808, 1781, 2393, 2471
BstNI CCWGG 7 cut(s) 59, 106, 1437, 1503, 1643, 1668, 2723
BstPI GGTNACC 1 cut(s) 825
BstSCI CCNGG 8 cut(s) 57, 104, 969, 1435, 1501, 1641, 1666, 2721
BstSFI CTRYAG 5 cut(s) 1086, 1770, 1951, 2365, 2547
BstUI CGCG 2 cut(s) 1818, 1959
BstV1I GCAGC 8 cut(s) 255, 338, 2264, 2315, 2379, 2486, 2533, 2766
BstX2I RGATCY 3 cut(s) 973, 1113, 1853
BstYI RGATCY 3 cut(s) 973, 1113, 1853
BsuI GTATCC 1 cut(s) 1507
BsuRI GGCC 6 cut(s) 62, 141, 1320, 1583, 1611, 2838
BtgZI GCGATG 2 cut(s) 109, 792
BtsCI GGATG 3 cut(s) 878, 2029, 2770
BtsI GCAGTG 2 cut(s) 170, 2207
BtsIMutI CAGTG 5 cut(s) 170, 664, 1250, 2080, 2207
CaiI CAGNNNCTG 1 cut(s) 1232
CfoI GCGC 2 cut(s) 1012, 1222
Cfr13I GGNCC 7 cut(s) 108, 182, 212, 289, 1609, 2245, 2824
CseI GACGC 1 cut(s) 1965
Csp6I GTAC 5 cut(s) 494, 512, 941, 1376, 1415
CviAII CATG 8 cut(s) 293, 872, 1020, 1346, 1622, 2011, 2225, 2270
CviQI GTAC 5 cut(s) 494, 512, 941, 1376, 1415
DraI TTTAAA 1 cut(s) 1722
DrdI GACNNNNNNGTC 1 cut(s) 189
DriI GACNNNNNGTC 1 cut(s) 551
DseDI GACNNNNNNGTC 1 cut(s) 189
EaeI YGGCCR 2 cut(s) 139, 1318
Eam1104I CTCTTC 4 cut(s) 1678, 1873, 2031, 2518
Eam1105I GACNNNNNGTC 1 cut(s) 551
EarI CTCTTC 4 cut(s) 1678, 1873, 2031, 2518
Ecl136II GAGCTC 1 cut(s) 2498
Eco130I CCWWGG 2 cut(s) 376, 2839
Eco24I GRGCYC 1 cut(s) 2500
Eco31I GGTCTC 2 cut(s) 197, 327
Eco47I GGWCC 6 cut(s) 108, 182, 212, 289, 2245, 2824
Eco47III AGCGCT 1 cut(s) 1221
Eco53kI GAGCTC 1 cut(s) 2498
Eco57I CTGAAG 3 cut(s) 1677, 2052, 2127
Eco72I CACGTG 1 cut(s) 845
Eco91I GGTNACC 1 cut(s) 825
EcoICRI GAGCTC 1 cut(s) 2498
EcoO109I RGGNCCY 2 cut(s) 2245, 2824
EcoO65I GGTNACC 1 cut(s) 825
EcoRII CCWGG 7 cut(s) 57, 104, 1435, 1501, 1641, 1666, 2721
EcoT14I CCWWGG 2 cut(s) 376, 2839
EcoT38I GRGCYC 1 cut(s) 2500
ErhI CCWWGG 2 cut(s) 376, 2839
Esp3I CGTCTC 1 cut(s) 568
FaeI CATG 8 cut(s) 296, 875, 1023, 1349, 1625, 2014, 2228, 2273
FaqI GGGAC 3 cut(s) 302, 539, 2739
FatI CATG 8 cut(s) 292, 871, 1019, 1345, 1621, 2010, 2224, 2269
FauI CCCGC 2 cut(s) 408, 2784
FbaI TGATCA 1 cut(s) 1543
FblI GTMKAC 2 cut(s) 1954, 2616
Fnu4HI GCNGC 9 cut(s) 63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
FokI GGATG 3 cut(s) 865, 2036, 2757
FriOI GRGCYC 1 cut(s) 2500
Fsp4HI GCNGC 9 cut(s) 63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
FspBI CTAG 5 cut(s) 606, 2163, 2384, 2598, 2831
GlaI GCGC 2 cut(s) 1011, 1221
GluI GCNGC 9 cut(s) 63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
GsuI CTGGAG 1 cut(s) 2334
HaeII RGCGCY 1 cut(s) 1223
HaeIII GGCC 6 cut(s) 62, 141, 1320, 1583, 1611, 2838
HapII CCGG 4 cut(s) 138, 164, 326, 970
HgaI GACGC 1 cut(s) 1965
HhaI GCGC 2 cut(s) 1012, 1222
Hin1II CATG 8 cut(s) 296, 875, 1023, 1349, 1625, 2014, 2228, 2273
Hin6I GCGC 2 cut(s) 1010, 1220
HinP1I GCGC 2 cut(s) 1010, 1220
HincII GTYRAC 3 cut(s) 961, 2617, 2761
HindII GTYRAC 3 cut(s) 961, 2617, 2761
HindIII AAGCTT 2 cut(s) 389, 455
HpaII CCGG 4 cut(s) 138, 164, 326, 970
HphI GGTGA 4 cut(s) 142, 819, 2620, 2738
Hpy99I CGWCG 3 cut(s) 77, 116, 134
HpyAV CCTTC 9 cut(s) 1434, 1460, 1675, 1946, 1972, 2009, 2371, 2815, 2828
HpyCH4III ACNGT 9 cut(s) 516, 527, 659, 772, 1198, 1234, 2075, 2407, 2446
HpyCH4IV ACGT 2 cut(s) 844, 1378
HpyF10VI GCNNNNNNNGC 6 cut(s) 344, 649, 808, 1781, 2393, 2471
HpySE526I ACGT 2 cut(s) 844, 1378
Hsp92II CATG 8 cut(s) 296, 875, 1023, 1349, 1625, 2014, 2228, 2273
HspAI GCGC 2 cut(s) 1010, 1220
KpnI GGTACC 1 cut(s) 497
Ksp22I TGATCA 1 cut(s) 1543
LguI GCTCTTC 2 cut(s) 1678, 2031
LmnI GCTCC 6 cut(s) 85, 343, 649, 2197, 2286, 2787
Lsp1109I GCAGC 8 cut(s) 255, 338, 2264, 2315, 2379, 2486, 2533, 2766
LweI GCATC 3 cut(s) 978, 2339, 2383
MaeI CTAG 5 cut(s) 606, 2163, 2384, 2598, 2831
MaeII ACGT 2 cut(s) 844, 1378
MaeIII GTNAC 8 cut(s) 148, 608, 659, 825, 1228, 1915, 2440, 2681
MfeI CAATTG 4 cut(s) 225, 1136, 1515, 2285
MflI RGATCY 3 cut(s) 973, 1113, 1853
MhlI GDGCHC 2 cut(s) 82, 2500
MlsI TGGCCA 1 cut(s) 1320
MluI ACGCGT 1 cut(s) 1957
MluNI TGGCCA 1 cut(s) 1320
MlyI GAGTC 5 cut(s) 656, 781, 1567, 2579, 2647
MmeI TCCRAC 6 cut(s) 135, 690, 1001, 1171, 1364, 2389
Mox20I TGGCCA 1 cut(s) 1320
MroXI GAANNNNTTC 3 cut(s) 1662, 1881, 1906
MscI TGGCCA 1 cut(s) 1320
MseI TTAA 7 cut(s) 1181, 1550, 1721, 1827, 2214, 2541, 2622
Msp20I TGGCCA 1 cut(s) 1320
MspA1I CMGCKG 2 cut(s) 2465, 2779
MspI CCGG 4 cut(s) 138, 164, 326, 970
MspR9I CCNGG 8 cut(s) 59, 106, 971, 1437, 1503, 1643, 1668, 2723
MunI CAATTG 4 cut(s) 225, 1136, 1515, 2285
Mva1269I GAATGC 3 cut(s) 349, 1354, 2139
MvaI CCWGG 7 cut(s) 59, 106, 1437, 1503, 1643, 1668, 2723
MvnI CGCG 2 cut(s) 1818, 1959
MwoI GCNNNNNNNGC 6 cut(s) 344, 649, 808, 1781, 2393, 2471
NciI CCSGG 1 cut(s) 971
NlaIII CATG 8 cut(s) 296, 875, 1023, 1349, 1625, 2014, 2228, 2273
NlaIV GGNNCC 9 cut(s) 290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
NmuCI GTSAC 5 cut(s) 148, 659, 825, 1915, 2681
NspV TTCGAA 1 cut(s) 2343
PciSI GCTCTTC 2 cut(s) 1678, 2031
PctI GAATGC 3 cut(s) 349, 1354, 2139
PdmI GAANNNNTTC 3 cut(s) 1662, 1881, 1906
PfeI GAWTC 5 cut(s) 160, 1052, 1058, 1387, 2345
PflMI CCANNNNNTGG 2 cut(s) 105, 1349
PfoI TCCNGGA 1 cut(s) 1641
PkrI GCNGC 9 cut(s) 64, 270, 353, 2254, 2305, 2369, 2476, 2548, 2781
PleI GAGTC 5 cut(s) 656, 781, 1567, 2578, 2646
PmaCI CACGTG 1 cut(s) 845
PmlI CACGTG 1 cut(s) 845
PpsI GAGTC 5 cut(s) 656, 781, 1567, 2578, 2646
Ppu21I YACGTR 2 cut(s) 845, 1379
PpuMI RGGWCCY 2 cut(s) 2245, 2824
PsiI TTATAA 1 cut(s) 1098
Psp124BI GAGCTC 1 cut(s) 2500
Psp5II RGGWCCY 2 cut(s) 2245, 2824
Psp6I CCWGG 7 cut(s) 57, 104, 1435, 1501, 1641, 1666, 2721
PspCI CACGTG 1 cut(s) 845
PspEI GGTNACC 1 cut(s) 825
PspGI CCWGG 7 cut(s) 57, 104, 1435, 1501, 1641, 1666, 2721
PspN4I GGNNCC 9 cut(s) 290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
PspPI GGNCC 7 cut(s) 108, 182, 212, 289, 1609, 2245, 2824
PspPPI RGGWCCY 2 cut(s) 2245, 2824
PsrI GAACNNNNNNTAC 2 cut(s) 2308, 2340
PstI CTGCAG 2 cut(s) 2369, 2551
PstNI CAGNNNCTG 1 cut(s) 1232
PsuI RGATCY 3 cut(s) 973, 1113, 1853
PvuII CAGCTG 1 cut(s) 2465
RsaI GTAC 5 cut(s) 495, 513, 942, 1377, 1416
RsaNI GTAC 5 cut(s) 494, 512, 941, 1376, 1415
SacI GAGCTC 1 cut(s) 2500
SalI GTCGAC 1 cut(s) 2615
SapI GCTCTTC 2 cut(s) 1678, 2031
SaqAI TTAA 7 cut(s) 1181, 1550, 1721, 1827, 2214, 2541, 2622
SatI GCNGC 9 cut(s) 63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
Sau96I GGNCC 7 cut(s) 108, 182, 212, 289, 1609, 2245, 2824
SchI GAGTC 5 cut(s) 656, 781, 1567, 2579, 2647
ScrFI CCNGG 8 cut(s) 59, 106, 971, 1437, 1503, 1643, 1668, 2723
SduI GDGCHC 2 cut(s) 82, 2500
SfaNI GCATC 3 cut(s) 978, 2339, 2383
SfcI CTRYAG 5 cut(s) 1086, 1770, 1951, 2365, 2547
SfuI TTCGAA 1 cut(s) 2343
SinI GGWCC 6 cut(s) 108, 182, 212, 289, 2245, 2824
SmlI CTYRAG 2 cut(s) 283, 2528
SmoI CTYRAG 2 cut(s) 283, 2528
SsiI CCGC 5 cut(s) 63, 397, 401, 440, 2777
SspI AATATT 2 cut(s) 1708, 2504
SspMI CTAG 5 cut(s) 606, 2163, 2384, 2598, 2831
SstI GAGCTC 1 cut(s) 2500
StyD4I CCNGG 8 cut(s) 57, 104, 969, 1435, 1501, 1641, 1666, 2721
StyI CCWWGG 2 cut(s) 376, 2839
TaaI ACNGT 9 cut(s) 516, 527, 659, 772, 1198, 1234, 2075, 2407, 2446
TaiI ACGT 2 cut(s) 847, 1381
TaqI TCGA 5 cut(s) 307, 1451, 2131, 2343, 2616
TauI GCSGC 1 cut(s) 65
TfiI GAWTC 5 cut(s) 160, 1052, 1058, 1387, 2345
Tru1I TTAA 7 cut(s) 1181, 1550, 1721, 1827, 2214, 2541, 2622
Tru9I TTAA 7 cut(s) 1181, 1550, 1721, 1827, 2214, 2541, 2622
TscAI CASTG 5 cut(s) 177, 664, 1250, 2080, 2207
TseFI GTSAC 5 cut(s) 148, 659, 825, 1915, 2681
TseI GCWGC 8 cut(s) 268, 351, 2252, 2303, 2367, 2474, 2546, 2779
Tsp45I GTSAC 5 cut(s) 148, 659, 825, 1915, 2681
TspDTI ATGAA 9 cut(s) 309, 867, 1008, 1146, 1319, 1610, 1991, 2442, 2505
TspGWI ACGGA 3 cut(s) 225, 662, 2078
TspRI CASTG 5 cut(s) 177, 664, 1250, 2080, 2207
Van91I CCANNNNNTGG 2 cut(s) 105, 1349
VpaK11BI GGWCC 6 cut(s) 108, 182, 212, 289, 2245, 2824
XapI RAATTY 4 cut(s) 1325, 1903, 2152, 2468
XbaI TCTAGA 1 cut(s) 2162
XmiI GTMKAC 2 cut(s) 1954, 2616
XmnI GAANNNNTTC 3 cut(s) 1662, 1881, 1906
XspI CTAG 5 cut(s) 606, 2163, 2384, 2598, 2831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.