Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002358.1

Orthogroup ID

OG0001566

Physical Location & Seq

Genomic Coordinates Forward (+)

60079 .. 64045

Gene Structure 3967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002358.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

atgagtcgagaacagaagaggatgaagcaggagaagggatcggatgacgccgagaaggtggtggttgcggttaaggcgtccaaggagattcccaagactgctctggtgtgggcattgactcatgtcgttcaacctggagattgcattacactgcttgtagttgtcccatctcaaagttcaggtagaaaattatggggcttcccaagattcgcaggggactgtgcaagtggtaacaagaagtctcagtcaggaacaacctcagagctgaaaggtgatatctcagattcctgctctcagatgatccttcagcttcatgaagtttatgatccaaataagataaacgtgaagataaagattatatctggatcaccttctgggtctgtggctgtggaggccaagagagctcaagctagttgggttgtgttagacaaacaccttaaacatgaagaaaaacggtgtatggaagagctgcagtgtaacattgtggttatgaagcgttcccagccaaaagttcttcgcttaaatttgaataattcacctaaaaaggatgctgagtctgtctgtcaagtagcttctgagcttgaaggatctgaaaagcataccaaaaagatgaataattcttccattcgaggaccggatgtgactccaactagtagtccggagctagggacaccatttacagctactgaggctggaacttcatccgtgtcaagttcagatccaggaacttcaccttttttcatttctggagtaaatggagataaaaagatagtggaatcattggttggtaaagaaaatcaggtccttgatgacagcagttcggatacagatagtgaatgtttatctacatcttcagcaagtgtgaggttccaaccatggatagcagagtttctaaattctcatcatcaatcctcacaacagatagaagaaagttcacacagaactaatgataatcctaaagcacctactaccaaagacttgcttgagaaaatttcaaaacttgaaagagatgctggaattggaatgtcaaattatagaggtgacatggacttcagtggaaatctgagagaagcaatttcattgtctaggaacgcgcctccagggccacctccattgtgctcgatatgccaacacaaggcacctgtgtttggaaaacctccaaggtggttcagctatgcagagctggagcttgctactgggggattttcacaggccaacttcttggctgaaggagggttcggttctgttcatagaggggtgctaccagatggccaggctgttgctgttaagcaacacaaattggctagttctcaaggggatcaagagttctgttcagaagtcgaagtcctgagctgtgctcagcaccgaaatgttgtcatgttgattggcttctgtattgaggacaaaagaagattgctggtttatgaatacatatgcaatgggtcattagattctcatctatatagacgaaatcgtgagcctttagaatggtctgcacggcaaaaaattgctgtgggagctgctcgagggctgcgttatcttcatgaagaatgtagagtgggttgcattgtgcaccgtgacatgcggcccaacaacatcctcatcactcatgattttgagccactggttggggattttggcctcgcaaggtggcaacctgatggagacctggctgtggacacgagagtaattggaacattcggatatttggcacctgaatatgctcaaagtggtcaaatcacggaaaaagctgatgtttattcctttggggtggtattggtggaacttgttaccgggcgaaaagcagtggaccttaaccggccaaaagggcagcaatgtctcactgaatgggcacgcccattattagaagaatatgccattgatgaactggttgaccctagcctggaaagcttttcagaacacgaggtttattgcatgcttcaagctgcctctctatgcatacggcgtgatcctcaaactaggcctcgcatgtcacaggttctgcgtatactagaaggcgacatggtaatggactcaaattacatgccaactcctgggtatgatgtcgggtgccggagtggtcggatttggtcggagcaccagcagaaggaacgttatagtggacccctggacgaggcattggatgggtatggaaagctctctcttgaaaattcgaggtcttctttctgggagagggacaaggcaaggaggacttcttcatgtgaagaccatctgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

745

Amino Acids

82.49

Weight (kDa)

6.15

Isoelectric Point (pI)

51.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55200 AT1G55200 AT1G55200 AT1G55200 AT3G13690 AT3G13690 AT3G13690
fragaria_vesca	FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080 FvH4_6g33080
malus_domestica	MD09G1194900.v1.1 MD17G1175400.v1.1
prunus_persica	Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1 Prupe.3G051500_v2.0.a1
pyrus_communis	pycom09g11200 pycom17g18180
rosa_chinensis	RchiOBHm_Chr2g0142801
rosa_laevigata	RLG00000019986
rosa_multiflora	Rmu_sc0002358.1_g000015
rosa_roxburghii	Rroxscaffold_2G00102310 Rroxscaffold_2G00103360
rosa_rugosa	Rorug02G0375100 Rorug02G0375200 Rorug02G0375300
rosa_samantha	Rh2BG437900 Rh2CG414000 Rh2DG447700
rosa_wichuraiana	Rw2G035030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	1138, 1711, 2070
AccB7I	CCANNNNNTGG	2 cut(s)	1628, 2054
AccI	GTMKAC	1 cut(s)	2008
AccII	CGCG	1 cut(s)	1094
AccIII	TCCGGA	1 cut(s)	658
AciI	CCGC	2 cut(s)	68, 1585
AclI	AACGTT	1 cut(s)	2113
AclWI	GGATC	8 cut(s)	46, 295, 320, 373, 595, 713, 1326, 1964
AcoI	YGGCCR	2 cut(s)	1270, 1820
AcsI	RAATTY	4 cut(s)	523, 895, 990, 2170
AcuI	CTGAAG	4 cut(s)	290, 837, 1036, 1248
AcyI	GRCGYC	2 cut(s)	48, 77
AfiI	CCNNNNNNNGG	9 cut(s)	665, 1135, 1148, 1628, 1675, 1903, 2054, 2107, 2134
AgsI	TTSAA	7 cut(s)	131, 529, 584, 996, 1004, 1943, 2168
AhlI	ACTAGT	1 cut(s)	650
AjnI	CCWGG	8 cut(s)	133, 721, 1099, 1272, 1668, 1902, 2053, 2127
AjuI	GAANNNNNNNTTGG	2 cut(s)	768, 800
AloI	GAACNNNNNNTCC	2 cut(s)	1310, 1342
Alw21I	GWGCWC	5 cut(s)	406, 1121, 1360, 1575, 2100
Alw26I	GTCTC	3 cut(s)	246, 1659, 1844
Alw44I	GTGCAC	1 cut(s)	1571
AlwI	GGATC	8 cut(s)	46, 295, 320, 373, 595, 713, 1326, 1964
AlwNI	CAGNNNCTG	2 cut(s)	686, 2002
Ama87I	CYCGRG	1 cut(s)	1524
Aor13HI	TCCGGA	1 cut(s)	658
AoxI	GGCC	8 cut(s)	393, 1103, 1212, 1270, 1586, 1639, 1820, 1982
ApaLI	GTGCAC	1 cut(s)	1571
ApeKI	GCWGC	5 cut(s)	469, 1520, 1531, 1831, 1946
ApoI	RAATTY	4 cut(s)	523, 895, 990, 2170
AspLEI	GCGC	1 cut(s)	1096
AspS9I	GGNCC	6 cut(s)	632, 802, 1103, 1587, 1810, 2123
AsuC2I	CCSGG	1 cut(s)	1795
AsuHPI	GGTGA	5 cut(s)	284, 360, 528, 723, 1052
AvaI	CYCGRG	1 cut(s)	1524
AvaII	GGWCC	4 cut(s)	632, 802, 1810, 2123
BaeGI	GKGCMC	2 cut(s)	1575, 1855
BalI	TGGCCA	1 cut(s)	1272
BanI	GGYRCC	3 cut(s)	1138, 1711, 2070
BanII	GRGCYC	1 cut(s)	406
BauI	CACGAG	2 cut(s)	1681, 1922
BbsI	GAAGAC	2 cut(s)	2172, 2232
Bbv12I	GWGCWC	5 cut(s)	406, 1121, 1360, 1575, 2100
BbvI	GCAGC	5 cut(s)	456, 1507, 1518, 1843, 1933
BccI	CCATC	4 cut(s)	175, 1262, 1655, 2138
BceAI	ACGGC	2 cut(s)	1514, 1979
BciT130I	CCWGG	8 cut(s)	135, 723, 1101, 1274, 1670, 1904, 2055, 2129
BciVI	GTATCC	1 cut(s)	817
BcnI	CCSGG	1 cut(s)	1795
BcoDI	GTCTC	3 cut(s)	246, 1659, 1844
BcuI	ACTAGT	1 cut(s)	650
BfaI	CTAG	8 cut(s)	411, 651, 665, 1086, 1305, 1899, 1980, 2012
BfmI	CTRYAG	1 cut(s)	470
BfuI	GTATCC	1 cut(s)	817
BglI	GCCNNNNNGGC	2 cut(s)	1102, 1828
BisI	GCNGC	6 cut(s)	470, 1521, 1532, 1586, 1832, 1947
BlpI	GCTNAGC	1 cut(s)	1359
BlsI	GCNGC	6 cut(s)	471, 1522, 1533, 1587, 1833, 1948
Bme1390I	CCNGG	9 cut(s)	135, 723, 1101, 1274, 1670, 1795, 1904, 2055, 2129
Bme18I	GGWCC	4 cut(s)	632, 802, 1810, 2123
BmeT110I	CYCGRG	1 cut(s)	1524
BmgT120I	GGNCC	6 cut(s)	632, 802, 1103, 1587, 1810, 2123
BmiI	GGNNCC	5 cut(s)	869, 1140, 1713, 2072, 2125
BmrFI	CCNGG	9 cut(s)	135, 723, 1101, 1274, 1670, 1795, 1904, 2055, 2129
BmrI	ACTGGG	1 cut(s)	1206
BmsI	GCATC	2 cut(s)	538, 1000
BmuI	ACTGGG	1 cut(s)	1206
BoxI	GACNNNNGTC	1 cut(s)	122
BpiI	GAAGAC	2 cut(s)	2172, 2232
BplI	GAGNNNNNCTC	2 cut(s)	1342, 1374
BpmI	CTGGAG	4 cut(s)	156, 768, 1083, 1205
Bpu10I	CCTNAGC	1 cut(s)	1349
Bpu1102I	GCTNAGC	1 cut(s)	1359
BpuEI	CTTGAG	3 cut(s)	390, 1004, 1296
BpuMI	CCSGG	1 cut(s)	1795
BsaBI	GATNNNNATC	1 cut(s)	1455
BsaHI	GRCGYC	2 cut(s)	48, 77
BsaI	GGTCTC	1 cut(s)	1659
BsaJI	CCNNGG	6 cut(s)	81, 875, 1100, 1160, 2054, 2127
BsaWI	WCCGGW	2 cut(s)	634, 658
Bsc4I	CCNNNNNNNGG	9 cut(s)	665, 1135, 1148, 1628, 1675, 1903, 2054, 2107, 2134
Bse118I	RCCGGY	1 cut(s)	1818
Bse1I	ACTGG	3 cut(s)	1201, 1629, 1893
Bse3DI	GCAATG	2 cut(s)	1444, 1841
Bse8I	GATNNNNATC	1 cut(s)	1455
BseAI	TCCGGA	1 cut(s)	658
BseBI	CCWGG	8 cut(s)	135, 723, 1101, 1274, 1670, 1904, 2055, 2129
BseDI	CCNNGG	6 cut(s)	81, 875, 1100, 1160, 2054, 2127
BseGI	GGATG	7 cut(s)	27, 49, 553, 643, 701, 1596, 2149
BseJI	GATNNNNATC	1 cut(s)	1455
BseLI	CCNNNNNNNGG	9 cut(s)	665, 1135, 1148, 1628, 1675, 1903, 2054, 2107, 2134
BseMI	GCAATG	2 cut(s)	1444, 1841
BseNI	ACTGG	3 cut(s)	1201, 1629, 1893
BseSI	GKGCMC	2 cut(s)	1575, 1855
BseXI	GCAGC	5 cut(s)	456, 1507, 1518, 1843, 1933
BseYI	CCCAGC	1 cut(s)	501
BsgI	GTGCAG	1 cut(s)	1479
Bsh1236I	CGCG	1 cut(s)	1094
BshFI	GGCC	8 cut(s)	395, 1105, 1214, 1272, 1588, 1641, 1822, 1984
BshNI	GGYRCC	3 cut(s)	1138, 1711, 2070
BsiHKAI	GWGCWC	5 cut(s)	406, 1121, 1360, 1575, 2100
BsiHKCI	CYCGRG	1 cut(s)	1524
BsiSI	CCGG	5 cut(s)	635, 659, 1794, 1819, 2074
BslFI	GGGAC	4 cut(s)	149, 230, 682, 2210
BslI	CCNNNNNNNGG	9 cut(s)	665, 1135, 1148, 1628, 1675, 1903, 2054, 2107, 2134
BsmAI	GTCTC	3 cut(s)	246, 1659, 1844
BsmFI	GGGAC	4 cut(s)	149, 230, 682, 2210
BsnI	GGCC	8 cut(s)	395, 1105, 1214, 1272, 1588, 1641, 1822, 1984
Bso31I	GGTCTC	1 cut(s)	1659
BsoBI	CYCGRG	1 cut(s)	1524
Bsp1286I	GDGCHC	6 cut(s)	406, 1121, 1360, 1575, 1855, 2100
Bsp13I	TCCGGA	1 cut(s)	658
Bsp143I	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
Bsp1720I	GCTNAGC	1 cut(s)	1359
Bsp19I	CCATGG	1 cut(s)	875
BspACI	CCGC	2 cut(s)	68, 1585
BspANI	GGCC	8 cut(s)	395, 1105, 1214, 1272, 1588, 1641, 1822, 1984
BspEI	TCCGGA	1 cut(s)	658
BspFNI	CGCG	1 cut(s)	1094
BspHI	TCATGA	3 cut(s)	313, 1543, 1609
BspLI	GGNNCC	5 cut(s)	869, 1140, 1713, 2072, 2125
BspMAI	CTGCAG	1 cut(s)	474
BspPI	GGATC	8 cut(s)	46, 295, 320, 373, 595, 713, 1326, 1964
BspQI	GCTCTTC	1 cut(s)	459
BspT107I	GGYRCC	3 cut(s)	1138, 1711, 2070
BspTNI	GGTCTC	1 cut(s)	1659
BsrDI	GCAATG	2 cut(s)	1444, 1841
BsrFI	RCCGGY	1 cut(s)	1818
BsrI	ACTGG	3 cut(s)	1201, 1629, 1893
BssAI	RCCGGY	1 cut(s)	1818
BssECI	CCNNGG	6 cut(s)	81, 875, 1100, 1160, 2054, 2127
BssMI	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
BssNAI	GTATAC	1 cut(s)	2009
BssNI	GRCGYC	2 cut(s)	48, 77
BssSI	CACGAG	2 cut(s)	1681, 1922
BssT1I	CCWWGG	3 cut(s)	81, 875, 1160
Bst1107I	GTATAC	1 cut(s)	2009
Bst2BI	CACGAG	2 cut(s)	1681, 1922
Bst2UI	CCWGG	8 cut(s)	135, 723, 1101, 1274, 1670, 1904, 2055, 2129
Bst4CI	ACNGT	3 cut(s)	221, 456, 1577
Bst6I	CTCTTC	2 cut(s)	11, 459
BstACI	GRCGYC	2 cut(s)	48, 77
BstC8I	GCNNGC	3 cut(s)	1191, 1855, 1937
BstDSI	CCRYGG	1 cut(s)	875
BstENI	CCTNNNNNAGG	1 cut(s)	2132
BstF5I	GGATG	7 cut(s)	27, 49, 553, 643, 701, 1596, 2149
BstFNI	CGCG	1 cut(s)	1094
BstHHI	GCGC	1 cut(s)	1096
BstKTI	GATC	8 cut(s)	41, 303, 328, 368, 590, 721, 1321, 1972
BstMAI	GTCTC	3 cut(s)	246, 1659, 1844
BstMBI	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
BstNI	CCWGG	8 cut(s)	135, 723, 1101, 1274, 1670, 1904, 2055, 2129
BstNSI	RCATGY	4 cut(s)	1585, 1939, 1993, 2047
BstPAI	GACNNNNGTC	1 cut(s)	122
BstSCI	CCNGG	9 cut(s)	133, 721, 1099, 1272, 1668, 1793, 1902, 2053, 2127
BstSFI	CTRYAG	1 cut(s)	470
BstSLI	GKGCMC	2 cut(s)	1575, 1855
BstUI	CGCG	1 cut(s)	1094
BstV1I	GCAGC	5 cut(s)	456, 1507, 1518, 1843, 1933
BstV2I	GAAGAC	2 cut(s)	2172, 2232
BstX2I	RGATCY	2 cut(s)	587, 718
BstXI	CCANNNNNNTGG	1 cut(s)	1222
BstYI	RGATCY	2 cut(s)	587, 718
BstZ17I	GTATAC	1 cut(s)	2009
BsuI	GTATCC	1 cut(s)	817
BsuRI	GGCC	8 cut(s)	395, 1105, 1214, 1272, 1588, 1641, 1822, 1984
BtgI	CCRYGG	1 cut(s)	875
BtsCI	GGATG	7 cut(s)	27, 49, 553, 643, 701, 1596, 2149
BtsI	GCAGTG	3 cut(s)	149, 479, 1812
BtsIMutI	CAGTG	6 cut(s)	149, 479, 1060, 1622, 1812, 1842
Cac8I	GCNNGC	3 cut(s)	1191, 1855, 1937
CaiI	CAGNNNCTG	2 cut(s)	686, 2002
CciI	TCATGA	3 cut(s)	313, 1543, 1609
CfoI	GCGC	1 cut(s)	1096
Cfr10I	RCCGGY	1 cut(s)	1818
Cfr13I	GGNCC	6 cut(s)	632, 802, 1103, 1587, 1810, 2123
CseI	GACGC	2 cut(s)	56, 66
CspCI	CAANNNNNGTGG	2 cut(s)	1095, 1130
DpnI	GATC	8 cut(s)	40, 302, 327, 367, 589, 720, 1320, 1971
DpnII	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
EaeI	YGGCCR	2 cut(s)	1270, 1820
Eam1104I	CTCTTC	2 cut(s)	11, 459
EarI	CTCTTC	2 cut(s)	11, 459
Ecl136II	GAGCTC	1 cut(s)	404
Eco130I	CCWWGG	3 cut(s)	81, 875, 1160
Eco147I	AGGCCT	1 cut(s)	1984
Eco24I	GRGCYC	1 cut(s)	406
Eco31I	GGTCTC	1 cut(s)	1659
Eco32I	GATATC	1 cut(s)	277
Eco47I	GGWCC	4 cut(s)	632, 802, 1810, 2123
Eco53kI	GAGCTC	1 cut(s)	404
Eco57I	CTGAAG	4 cut(s)	290, 837, 1036, 1248
Eco88I	CYCGRG	1 cut(s)	1524
EcoICRI	GAGCTC	1 cut(s)	404
EcoNI	CCTNNNNNAGG	1 cut(s)	2132
EcoO109I	RGGNCCY	1 cut(s)	802
EcoRII	CCWGG	8 cut(s)	133, 721, 1099, 1272, 1668, 1902, 2053, 2127
EcoRV	GATATC	1 cut(s)	277
EcoT14I	CCWWGG	3 cut(s)	81, 875, 1160
EcoT22I	ATGCAT	1 cut(s)	1961
EcoT38I	GRGCYC	1 cut(s)	406
ErhI	CCWWGG	3 cut(s)	81, 875, 1160
FalI	AAGNNNNNCTT	4 cut(s)	966, 998, 2197, 2229
FaqI	GGGAC	4 cut(s)	149, 230, 682, 2210
FauNDI	CATATG	1 cut(s)	1433
FblI	GTMKAC	1 cut(s)	2008
Fnu4HI	GCNGC	6 cut(s)	470, 1521, 1532, 1586, 1832, 1947
FokI	GGATG	7 cut(s)	34, 56, 560, 650, 688, 1583, 2156
FriOI	GRGCYC	1 cut(s)	406
Fsp4HI	GCNGC	6 cut(s)	470, 1521, 1532, 1586, 1832, 1947
FspBI	CTAG	8 cut(s)	411, 651, 665, 1086, 1305, 1899, 1980, 2012
GlaI	GCGC	1 cut(s)	1095
GluI	GCNGC	6 cut(s)	470, 1521, 1532, 1586, 1832, 1947
GsaI	CCCAGC	1 cut(s)	505
GsuI	CTGGAG	4 cut(s)	156, 768, 1083, 1205
HaeIII	GGCC	8 cut(s)	395, 1105, 1214, 1272, 1588, 1641, 1822, 1984
HapII	CCGG	5 cut(s)	635, 659, 1794, 1819, 2074
HgaI	GACGC	2 cut(s)	56, 66
HhaI	GCGC	1 cut(s)	1096
Hin1I	GRCGYC	2 cut(s)	48, 77
Hin6I	GCGC	1 cut(s)	1094
HinP1I	GCGC	1 cut(s)	1094
HincII	GTYRAC	1 cut(s)	1894
HindII	GTYRAC	1 cut(s)	1894
HindIII	AAGCTT	1 cut(s)	1909
HpaII	CCGG	5 cut(s)	635, 659, 1794, 1819, 2074
HphI	GGTGA	5 cut(s)	284, 360, 528, 723, 1052
Hpy166II	GTNNAC	7 cut(s)	935, 1573, 1678, 1810, 1894, 2009, 2123
Hpy8I	GTNNAC	7 cut(s)	935, 1573, 1678, 1810, 1894, 2009, 2123
HpyAV	CCTTC	8 cut(s)	28, 49, 314, 381, 578, 1223, 2009, 2101
HpyCH4III	ACNGT	3 cut(s)	221, 456, 1577
HpyCH4IV	ACGT	2 cut(s)	342, 2113
HpySE526I	ACGT	2 cut(s)	342, 2113
Hsp92I	GRCGYC	2 cut(s)	48, 77
HspAI	GCGC	1 cut(s)	1094
Kpn2I	TCCGGA	1 cut(s)	658
Kzo9I	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
LguI	GCTCTTC	1 cut(s)	459
LmnI	GCTCC	4 cut(s)	661, 1186, 1517, 2095
Lsp1109I	GCAGC	5 cut(s)	456, 1507, 1518, 1843, 1933
LweI	GCATC	2 cut(s)	538, 1000
MaeI	CTAG	8 cut(s)	411, 651, 665, 1086, 1305, 1899, 1980, 2012
MaeII	ACGT	2 cut(s)	342, 2113
MaeIII	GTNAC	7 cut(s)	230, 476, 640, 1040, 1577, 1789, 1992
MalI	GATC	8 cut(s)	40, 302, 327, 367, 589, 720, 1320, 1971
MboI	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
MflI	RGATCY	2 cut(s)	587, 718
MhlI	GDGCHC	6 cut(s)	406, 1121, 1360, 1575, 1855, 2100
MlsI	TGGCCA	1 cut(s)	1272
MluNI	TGGCCA	1 cut(s)	1272
MlyI	GAGTC	5 cut(s)	13, 112, 563, 637, 2027
MmeI	TCCRAC	4 cut(s)	671, 895, 2063, 2073
Mox20I	TGGCCA	1 cut(s)	1272
Mph1103I	ATGCAT	1 cut(s)	1961
MroI	TCCGGA	1 cut(s)	658
MscI	TGGCCA	1 cut(s)	1272
MseI	TTAA	5 cut(s)	72, 438, 521, 1287, 1815
MslI	CAYNNNNRTG	2 cut(s)	1368, 2027
Msp20I	TGGCCA	1 cut(s)	1272
MspI	CCGG	5 cut(s)	635, 659, 1794, 1819, 2074
MspR9I	CCNGG	9 cut(s)	135, 723, 1101, 1274, 1670, 1795, 1904, 2055, 2129
MvaI	CCWGG	8 cut(s)	135, 723, 1101, 1274, 1670, 1904, 2055, 2129
MvnI	CGCG	1 cut(s)	1094
NciI	CCSGG	1 cut(s)	1795
NcoI	CCATGG	1 cut(s)	875
NdeI	CATATG	1 cut(s)	1433
NdeII	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
NlaIV	GGNNCC	5 cut(s)	869, 1140, 1713, 2072, 2125
NmeAIII	GCCGAG	1 cut(s)	76
NmuCI	GTSAC	4 cut(s)	640, 1040, 1577, 1992
NsiI	ATGCAT	1 cut(s)	1961
NspI	RCATGY	4 cut(s)	1585, 1939, 1993, 2047
PaeI	GCATGC	1 cut(s)	1939
PaeR7I	CTCGAG	1 cut(s)	1524
PagI	TCATGA	3 cut(s)	313, 1543, 1609
PceI	AGGCCT	1 cut(s)	1984
PciSI	GCTCTTC	1 cut(s)	459
PcsI	WCGNNNNNNNCGW	1 cut(s)	1531
PfeI	GAWTC	5 cut(s)	88, 207, 284, 776, 1451
PflMI	CCANNNNNTGG	2 cut(s)	1628, 2054
PfoI	TCCNGGA	1 cut(s)	721
PkrI	GCNGC	6 cut(s)	471, 1522, 1533, 1587, 1833, 1948
PleI	GAGTC	5 cut(s)	12, 112, 562, 637, 2027
PpsI	GAGTC	5 cut(s)	12, 112, 562, 637, 2027
PpuMI	RGGWCCY	1 cut(s)	802
PshAI	GACNNNNGTC	1 cut(s)	122
Psp124BI	GAGCTC	1 cut(s)	406
Psp1406I	AACGTT	1 cut(s)	2113
Psp5II	RGGWCCY	1 cut(s)	802
Psp6I	CCWGG	8 cut(s)	133, 721, 1099, 1272, 1668, 1902, 2053, 2127
PspFI	CCCAGC	1 cut(s)	501
PspGI	CCWGG	8 cut(s)	133, 721, 1099, 1272, 1668, 1902, 2053, 2127
PspN4I	GGNNCC	5 cut(s)	869, 1140, 1713, 2072, 2125
PspPI	GGNCC	6 cut(s)	632, 802, 1103, 1587, 1810, 2123
PspPPI	RGGWCCY	1 cut(s)	802
PspXI	VCTCGAGB	1 cut(s)	1524
PstI	CTGCAG	1 cut(s)	474
PstNI	CAGNNNCTG	2 cut(s)	686, 2002
PsuI	RGATCY	2 cut(s)	587, 718
RseI	CAYNNNNRTG	2 cut(s)	1368, 2027
SacI	GAGCTC	1 cut(s)	406
SapI	GCTCTTC	1 cut(s)	459
SaqAI	TTAA	5 cut(s)	72, 438, 521, 1287, 1815
SatI	GCNGC	6 cut(s)	470, 1521, 1532, 1586, 1832, 1947
Sau3AI	GATC	8 cut(s)	38, 300, 325, 365, 587, 718, 1318, 1969
Sau96I	GGNCC	6 cut(s)	632, 802, 1103, 1587, 1810, 2123
SchI	GAGTC	5 cut(s)	13, 112, 563, 637, 2027
ScrFI	CCNGG	9 cut(s)	135, 723, 1101, 1274, 1670, 1795, 1904, 2055, 2129
SduI	GDGCHC	6 cut(s)	406, 1121, 1360, 1575, 1855, 2100
SfaNI	GCATC	2 cut(s)	538, 1000
SfcI	CTRYAG	1 cut(s)	470
Sfr274I	CTCGAG	1 cut(s)	1524
SinI	GGWCC	4 cut(s)	632, 802, 1810, 2123
SlaI	CTCGAG	1 cut(s)	1524
SmiMI	CAYNNNNRTG	2 cut(s)	1368, 2027
SmlI	CTYRAG	4 cut(s)	405, 983, 1311, 1524
SmoI	CTYRAG	4 cut(s)	405, 983, 1311, 1524
SpeI	ACTAGT	1 cut(s)	650
SphI	GCATGC	1 cut(s)	1939
SseBI	AGGCCT	1 cut(s)	1984
SsiI	CCGC	2 cut(s)	68, 1585
SspMI	CTAG	8 cut(s)	411, 651, 665, 1086, 1305, 1899, 1980, 2012
SstI	GAGCTC	1 cut(s)	406
StuI	AGGCCT	1 cut(s)	1984
StyD4I	CCNGG	9 cut(s)	133, 721, 1099, 1272, 1668, 1793, 1902, 2053, 2127
StyI	CCWWGG	3 cut(s)	81, 875, 1160
TaaI	ACNGT	3 cut(s)	221, 456, 1577
TaiI	ACGT	2 cut(s)	345, 2116
TaqI	TCGA	6 cut(s)	7, 628, 1121, 1341, 1525, 2174
TauI	GCSGC	1 cut(s)	1588
TfiI	GAWTC	5 cut(s)	88, 207, 284, 776, 1451
Tru1I	TTAA	5 cut(s)	72, 438, 521, 1287, 1815
Tru9I	TTAA	5 cut(s)	72, 438, 521, 1287, 1815
TscAI	CASTG	6 cut(s)	156, 479, 1060, 1629, 1812, 1849
TseFI	GTSAC	4 cut(s)	640, 1040, 1577, 1992
TseI	GCWGC	5 cut(s)	469, 1520, 1531, 1831, 1946
Tsp45I	GTSAC	4 cut(s)	640, 1040, 1577, 1992
TspGWI	ACGGA	2 cut(s)	694, 1757
TspRI	CASTG	6 cut(s)	156, 479, 1060, 1629, 1812, 1849
Van91I	CCANNNNNTGG	2 cut(s)	1628, 2054
VneI	GTGCAC	1 cut(s)	1571
VpaK11BI	GGWCC	4 cut(s)	632, 802, 1810, 2123
XagI	CCTNNNNNAGG	1 cut(s)	2132
XapI	RAATTY	4 cut(s)	523, 895, 990, 2170
XceI	RCATGY	4 cut(s)	1585, 1939, 1993, 2047
XcmI	CCANNNNNNNNNTGG	2 cut(s)	100, 1885
XhoI	CTCGAG	1 cut(s)	1524
XmiI	GTMKAC	1 cut(s)	2008
XspI	CTAG	8 cut(s)	411, 651, 665, 1086, 1305, 1899, 1980, 2012
Zsp2I	ATGCAT	1 cut(s)	1961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.