Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001001

Physical Location & Seq

Genomic Coordinates Forward (+)

47809506 .. 47812019

Gene Structure 2514 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0375100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGCAGCAAATGATGGAGCAAAGCAATACTCGGTTCTCTGAGACTACTCAGAGGCTGAGAGACAAGAAAGTTGTGGACATGATGGCAAACAAGAGGAGGCTGGTGGAGGTTCCGTACACGGCGACTCTGGCTCACACCATGAGCTCATTGGTGGCCAACCAGGTGCTGGCGGTGCCCGTGGCGGCCCCTCCGGGTCATTGGATCGGAGCAGGCGGCTCGATGATTGTGGAAACTGACAGGCAAACCGGGGCTGCGCGGAAGCACTATATAGGGATGGCAACCATGCTTGATATCCTGGCTCATATTGCAGGAAATGATGGAGATCAATTGATGGTTGATGAGGGAGGCGTTCATGATGGGGGGTTTGATCTAGAGCATAAGATGTCTGTCCCCGTTTCTTCGATTATTGGGCATTGCCTCGAGGGTTTAAGCTTGTGGACTCTAAACCCCAACACAAGACTTTTTAACTCGCGTGTGCTCAGCATCATAGACTGTATGGAAGTGTTTAGCAAAGGAATACACCGTGCTTTGGTACCACTAGACAGCCACATGGACAACGTCTCTGGAGTTGAACTTGTGGAGTCTGCTTCCAGCTATCGAATGCTAACACAAATGGATGTCCTAAGGTTCCTGAAGGAACATGCTGAAGCTAGCAATGAACTAAATGGCATTCTGTCACGCACCGTTTCTGAATTGGGGGCTGTGACAGAGAGGGTTTATGCAATTACTGATCGCACCAAGGTTATAGATGCCATCAAGTGCATGCGAATTGCTTTGCTAAACGCTGTTCCGATAGTTAGGTCCTCCCCTGCCAACGAAGATGACCACAAGCAGCTTGTAAATGGAAGGGGTAGGCAGGTATTGGGCACATTTTCTGCAACAGATATAAGGGGATGCCACTTGTCAACACTGAAAACATGGTTACCAATAAGCGCACTGGAGTACACAGAGACGATTTCAGCCAGCCCTTTATTATCAAGCAATCCTAATGCGGGCGAGAGTGCAAGAGAACTAGTGGCGTGTCGAGTTGACTCGACACTGGCTGAAGTAATCGACAAGGTCGTCACTAAACACGTGCACAGAATTTGGGTGGTGGATCAACAAGGTTTGCTCATGGGGCTTACTTCACTCACTGATATAATCCGAGTGTTGAGGCACGCCGTGATGTCTGAAACCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

393

Amino Acids

43.08

Weight (kDa)

6.2

Isoelectric Point (pI)

39.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBS	PF00571	336 - 385	8.2e-07	CBS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21250 AT3G21250 AT3G21250 AT3G21250 AT3G21250 AT3G21250
fragaria_vesca	FvH4_6g33070 FvH4_6g33070 FvH4_6g33070 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260
malus_domestica	MD09G1195100.v1.1 MD14G1118300.v1.1 MD17G1175700.v1.1 MD17G1175800.v1.1
prunus_persica	Prupe.3G051600_v2.0.a1 Prupe.3G051800_v2.0.a1 Prupe.3G051800_v2.0.a1
pyrus_communis	pycom09g11210
rosa_chinensis	RchiOBHm_Chr2g0142721 RchiOBHm_Chr2g0142761 RchiOBHm_Chr2g0142771 RchiOBHm_Chr2g0150061
rosa_laevigata	RLG00000019980 RLG00000019982 RLG00000019984
rosa_multiflora	Rmu_co8521907.1_g000001 Rmu_sc0004112.1_g000013 Rmu_sc0004610.1_g000003
rosa_roxburghii	Rroxscaffold_2G00097480 Rroxscaffold_2G00102330 Rroxscaffold_2G00102350 Rroxscaffold_2G00102380 Rroxscaffold_2G00103380
rosa_rugosa	Rorug02G0374800 Rorug02G0374900 Rorug02G0375000 Rorug02G0375100 Rorug02G0418200
rosa_samantha	Rh1DG425700 Rh2AG427200 Rh2AG427900 Rh2AG428000 Rh2AG477500 Rh2BG437100 Rh2BG437400 Rh2BG437600 Rh2CG463300 Rh2DG446800 Rh2DG447100 Rh2DG447200 Rh2DG447300 Rh2DG447400 Rh2DG498700 Rh7DG155300
rosa_wichuraiana	Rw2G035000 Rw2G035010 Rw2G035020 Rw2G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1061
AbsI	CCTCGAGG	1 cut(s)	419
Acc36I	ACCTGC	1 cut(s)	847
Acc65I	GGTACC	1 cut(s)	532
AccB1I	GGYRCC	2 cut(s)	172, 532
AccB7I	CCANNNNNTGG	1 cut(s)	166
AccII	CGCG	2 cut(s)	256, 472
AciI	CCGC	5 cut(s)	170, 182, 213, 256, 992
AclWI	GGATC	2 cut(s)	209, 1104
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	1 cut(s)	1083
AcuI	CTGAAG	3 cut(s)	653, 666, 1065
AcvI	CACGTG	1 cut(s)	1075
AdeI	CACNNNGTG	1 cut(s)	1162
AfaI	GTAC	3 cut(s)	116, 534, 944
AfiI	CCNNNNNNNGG	3 cut(s)	166, 529, 992
AflIII	ACRYGT	1 cut(s)	1072
AgsI	TTSAA	1 cut(s)	572
AhlI	ACTAGT	1 cut(s)	1012
AjnI	CCWGG	2 cut(s)	159, 294
AluBI	AGCT	5 cut(s)	144, 432, 594, 650, 835
AluI	AGCT	5 cut(s)	144, 432, 594, 650, 835
Alw21I	GWGCWC	3 cut(s)	146, 480, 1080
Alw26I	GTCTC	4 cut(s)	35, 54, 565, 944
Alw44I	GTGCAC	1 cut(s)	1076
AlwI	GGATC	2 cut(s)	209, 1104
AlwNI	CAGNNNCTG	2 cut(s)	55, 166
Ama87I	CYCGRG	1 cut(s)	419
AoxI	GGCC	2 cut(s)	153, 183
ApaLI	GTGCAC	1 cut(s)	1076
ApeKI	GCWGC	3 cut(s)	4, 251, 832
ApoI	RAATTY	1 cut(s)	1083
Asp718I	GGTACC	1 cut(s)	532
AspLEI	GCGC	2 cut(s)	256, 935
AspS9I	GGNCC	2 cut(s)	184, 801
AsuC2I	CCSGG	2 cut(s)	192, 247
AsuNHI	GCTAGC	1 cut(s)	650
AvaI	CYCGRG	1 cut(s)	419
AvaII	GGWCC	1 cut(s)	801
AxyI	CCTNAGG	1 cut(s)	623
BaeGI	GKGCMC	3 cut(s)	177, 869, 1080
BalI	TGGCCA	1 cut(s)	155
BanI	GGYRCC	2 cut(s)	172, 532
BanII	GRGCYC	1 cut(s)	146
BbrPI	CACGTG	1 cut(s)	1075
Bbv12I	GWGCWC	3 cut(s)	146, 480, 1080
BbvI	GCAGC	3 cut(s)	16, 238, 844
BccI	CCATC	7 cut(s)	7, 76, 268, 311, 325, 350, 761
BceAI	ACGGC	2 cut(s)	135, 1145
BcgI	CGANNNNNNTGC	2 cut(s)	198, 232
BciT130I	CCWGG	2 cut(s)	161, 296
BcnI	CCSGG	2 cut(s)	192, 247
BcoDI	GTCTC	4 cut(s)	35, 54, 565, 944
BcuI	ACTAGT	1 cut(s)	1012
BfaI	CTAG	4 cut(s)	371, 539, 651, 1013
BfuAI	ACCTGC	1 cut(s)	847
BisI	GCNGC	5 cut(s)	5, 183, 214, 252, 833
BlpI	GCTNAGC	1 cut(s)	479
BlsI	GCNGC	5 cut(s)	6, 184, 215, 253, 834
Bme1390I	CCNGG	4 cut(s)	161, 192, 247, 296
Bme18I	GGWCC	1 cut(s)	801
BmeT110I	CYCGRG	1 cut(s)	419
BmgT120I	GGNCC	2 cut(s)	184, 801
BmiI	GGNNCC	5 cut(s)	111, 174, 186, 534, 629
BmrFI	CCNGG	4 cut(s)	161, 192, 247, 296
BmsI	GCATC	3 cut(s)	492, 739, 884
BmtI	GCTAGC	1 cut(s)	654
BpmI	CTGGAG	2 cut(s)	585, 959
Bpu1102I	GCTNAGC	1 cut(s)	479
BpuMI	CCSGG	2 cut(s)	192, 247
BsaAI	YACGTR	1 cut(s)	1075
BsaBI	GATNNNNATC	1 cut(s)	321
BsaJI	CCNNGG	3 cut(s)	177, 246, 738
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	3 cut(s)	166, 529, 992
Bse1I	ACTGG	2 cut(s)	942, 1044
Bse21I	CCTNAGG	1 cut(s)	623
Bse3DI	GCAATG	2 cut(s)	412, 661
Bse8I	GATNNNNATC	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	161, 296
BseDI	CCNNGG	3 cut(s)	177, 246, 738
BseGI	GGATG	3 cut(s)	279, 622, 899
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	3 cut(s)	166, 529, 992
BseMI	GCAATG	2 cut(s)	412, 661
BseMII	CTCAG	4 cut(s)	30, 47, 62, 493
BseNI	ACTGG	2 cut(s)	942, 1044
BseRI	GAGGAG	1 cut(s)	109
BseSI	GKGCMC	3 cut(s)	177, 869, 1080
BseXI	GCAGC	3 cut(s)	16, 238, 844
Bsh1236I	CGCG	2 cut(s)	256, 472
BshFI	GGCC	2 cut(s)	155, 185
BshNI	GGYRCC	2 cut(s)	172, 532
BsiHKAI	GWGCWC	3 cut(s)	146, 480, 1080
BsiHKCI	CYCGRG	1 cut(s)	419
BsiSI	CCGG	2 cut(s)	191, 246
BslFI	GGGAC	1 cut(s)	374
BslI	CCNNNNNNNGG	3 cut(s)	166, 529, 992
BsmAI	GTCTC	4 cut(s)	35, 54, 565, 944
BsmBI	CGTCTC	2 cut(s)	565, 944
BsmFI	GGGAC	1 cut(s)	374
BsmI	GAATGC	2 cut(s)	606, 669
BsnI	GGCC	2 cut(s)	155, 185
BsoBI	CYCGRG	1 cut(s)	419
Bsp1286I	GDGCHC	5 cut(s)	146, 177, 480, 869, 1080
Bsp143I	GATC	5 cut(s)	201, 322, 367, 730, 1096
Bsp1720I	GCTNAGC	1 cut(s)	479
BspACI	CCGC	5 cut(s)	170, 182, 213, 256, 992
BspANI	GGCC	2 cut(s)	155, 185
BspCNI	CTCAG	4 cut(s)	31, 48, 61, 492
BspFNI	CGCG	2 cut(s)	256, 472
BspHI	TCATGA	1 cut(s)	352
BspLI	GGNNCC	5 cut(s)	111, 174, 186, 534, 629
BspMI	ACCTGC	1 cut(s)	847
BspOI	GCTAGC	1 cut(s)	654
BspPI	GGATC	2 cut(s)	209, 1104
BspT107I	GGYRCC	2 cut(s)	172, 532
BsrDI	GCAATG	2 cut(s)	412, 661
BsrI	ACTGG	2 cut(s)	942, 1044
BssECI	CCNNGG	3 cut(s)	177, 246, 738
BssMI	GATC	5 cut(s)	201, 322, 367, 730, 1096
BssT1I	CCWWGG	1 cut(s)	738
Bst2UI	CCWGG	2 cut(s)	161, 296
Bst4CI	ACNGT	3 cut(s)	494, 524, 685
BstBAI	YACGTR	1 cut(s)	1075
BstC8I	GCNNGC	7 cut(s)	168, 211, 652, 764, 964, 994, 1158
BstDEI	CTNAG	5 cut(s)	39, 48, 56, 479, 623
BstDSI	CCRYGG	1 cut(s)	177
BstEII	GGTNACC	1 cut(s)	921
BstF5I	GGATG	3 cut(s)	279, 622, 899
BstFNI	CGCG	2 cut(s)	256, 472
BstHHI	GCGC	2 cut(s)	256, 935
BstKTI	GATC	5 cut(s)	204, 325, 370, 733, 1099
BstMAI	GTCTC	4 cut(s)	35, 54, 565, 944
BstMBI	GATC	5 cut(s)	201, 322, 367, 730, 1096
BstMWI	GCNNNNNNNGC	4 cut(s)	128, 172, 305, 1117
BstNI	CCWGG	2 cut(s)	161, 296
BstNSI	RCATGY	2 cut(s)	644, 766
BstPI	GGTNACC	1 cut(s)	921
BstSCI	CCNGG	4 cut(s)	159, 190, 245, 294
BstSLI	GKGCMC	3 cut(s)	177, 869, 1080
BstUI	CGCG	2 cut(s)	256, 472
BstV1I	GCAGC	3 cut(s)	16, 238, 844
Bsu36I	CCTNAGG	1 cut(s)	623
BsuRI	GGCC	2 cut(s)	155, 185
BtgI	CCRYGG	1 cut(s)	177
BtsCI	GGATG	3 cut(s)	279, 622, 899
BtsIMutI	CAGTG	4 cut(s)	908, 935, 1037, 1131
BveI	ACCTGC	1 cut(s)	847
Cac8I	GCNNGC	7 cut(s)	168, 211, 652, 764, 964, 994, 1158
CaiI	CAGNNNCTG	2 cut(s)	55, 166
CciI	TCATGA	1 cut(s)	352
CfoI	GCGC	2 cut(s)	256, 935
Cfr13I	GGNCC	2 cut(s)	184, 801
CsiI	ACCWGGT	1 cut(s)	159
Csp6I	GTAC	3 cut(s)	115, 533, 943
CviAII	CATG	9 cut(s)	79, 139, 283, 353, 550, 641, 763, 918, 1114
CviQI	GTAC	3 cut(s)	115, 533, 943
DdeI	CTNAG	5 cut(s)	39, 48, 56, 479, 623
DpnI	GATC	5 cut(s)	203, 324, 369, 732, 1098
DpnII	GATC	5 cut(s)	201, 322, 367, 730, 1096
DraIII	CACNNNGTG	1 cut(s)	1162
DrdI	GACNNNNNNGTC	1 cut(s)	1061
DseDI	GACNNNNNNGTC	1 cut(s)	1061
EaeI	YGGCCR	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	144
Eco130I	CCWWGG	1 cut(s)	738
Eco24I	GRGCYC	1 cut(s)	146
Eco32I	GATATC	1 cut(s)	292
Eco47I	GGWCC	1 cut(s)	801
Eco53kI	GAGCTC	1 cut(s)	144
Eco57I	CTGAAG	3 cut(s)	653, 666, 1065
Eco72I	CACGTG	1 cut(s)	1075
Eco81I	CCTNAGG	1 cut(s)	623
Eco88I	CYCGRG	1 cut(s)	419
Eco91I	GGTNACC	1 cut(s)	921
EcoICRI	GAGCTC	1 cut(s)	144
EcoO109I	RGGNCCY	1 cut(s)	801
EcoO65I	GGTNACC	1 cut(s)	921
EcoRII	CCWGG	2 cut(s)	159, 294
EcoRV	GATATC	1 cut(s)	292
EcoT14I	CCWWGG	1 cut(s)	738
EcoT38I	GRGCYC	1 cut(s)	146
ErhI	CCWWGG	1 cut(s)	738
Esp3I	CGTCTC	2 cut(s)	565, 944
FaeI	CATG	9 cut(s)	82, 142, 286, 356, 553, 644, 766, 921, 1117
FaqI	GGGAC	1 cut(s)	374
FatI	CATG	9 cut(s)	78, 138, 282, 352, 549, 640, 762, 917, 1113
FauI	CCCGC	1 cut(s)	985
Fnu4HI	GCNGC	5 cut(s)	5, 183, 214, 252, 833
FokI	GGATG	3 cut(s)	286, 629, 906
FriOI	GRGCYC	1 cut(s)	146
Fsp4HI	GCNGC	5 cut(s)	5, 183, 214, 252, 833
FspBI	CTAG	4 cut(s)	371, 539, 651, 1013
GlaI	GCGC	2 cut(s)	255, 934
GluI	GCNGC	5 cut(s)	5, 183, 214, 252, 833
GsuI	CTGGAG	2 cut(s)	585, 959
HaeIII	GGCC	2 cut(s)	155, 185
HapII	CCGG	2 cut(s)	191, 246
HhaI	GCGC	2 cut(s)	256, 935
Hin1II	CATG	9 cut(s)	82, 142, 286, 356, 553, 644, 766, 921, 1117
Hin6I	GCGC	2 cut(s)	254, 933
HinP1I	GCGC	2 cut(s)	254, 933
HincII	GTYRAC	2 cut(s)	906, 1030
HindII	GTYRAC	2 cut(s)	906, 1030
HindIII	AAGCTT	1 cut(s)	430
HinfI	GANTC	4 cut(s)	124, 439, 581, 1031
HpaII	CCGG	2 cut(s)	191, 246
Hpy166II	GTNNAC	7 cut(s)	76, 117, 438, 906, 945, 1030, 1078
Hpy188I	TCNGA	7 cut(s)	40, 51, 206, 691, 792, 1145, 1171
Hpy188III	TCNNGA	5 cut(s)	353, 371, 564, 631, 1179
Hpy8I	GTNNAC	7 cut(s)	76, 117, 438, 906, 945, 1030, 1078
HpyAV	CCTTC	2 cut(s)	628, 840
HpyCH4III	ACNGT	3 cut(s)	494, 524, 685
HpyCH4IV	ACGT	2 cut(s)	558, 1074
HpyCH4V	TGCA	7 cut(s)	4, 308, 722, 762, 878, 1004, 1078
HpyF10VI	GCNNNNNNNGC	4 cut(s)	128, 172, 305, 1117
HpyF3I	CTNAG	5 cut(s)	39, 48, 56, 479, 623
HpySE526I	ACGT	2 cut(s)	558, 1074
Hsp92II	CATG	9 cut(s)	82, 142, 286, 356, 553, 644, 766, 921, 1117
HspAI	GCGC	2 cut(s)	254, 933
KpnI	GGTACC	1 cut(s)	536
Kzo9I	GATC	5 cut(s)	201, 322, 367, 730, 1096
LmnI	GCTCC	2 cut(s)	16, 206
Lsp1109I	GCAGC	3 cut(s)	16, 238, 844
LweI	GCATC	3 cut(s)	492, 739, 884
MabI	ACCWGGT	1 cut(s)	159
MaeI	CTAG	4 cut(s)	371, 539, 651, 1013
MaeII	ACGT	2 cut(s)	558, 1074
MaeIII	GTNAC	4 cut(s)	675, 703, 921, 1063
MalI	GATC	5 cut(s)	203, 324, 369, 732, 1098
MboI	GATC	5 cut(s)	201, 322, 367, 730, 1096
MboII	GAAGA	2 cut(s)	390, 830
MfeI	CAATTG	1 cut(s)	326
MhlI	GDGCHC	5 cut(s)	146, 177, 480, 869, 1080
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	5 cut(s)	326, 692, 723, 768, 1083
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	4 cut(s)	118, 433, 590, 1025
Mox20I	TGGCCA	1 cut(s)	155
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	2 cut(s)	428, 465
Msp20I	TGGCCA	1 cut(s)	155
MspI	CCGG	2 cut(s)	191, 246
MspR9I	CCNGG	4 cut(s)	161, 192, 247, 296
MunI	CAATTG	1 cut(s)	326
Mva1269I	GAATGC	2 cut(s)	606, 669
MvaI	CCWGG	2 cut(s)	161, 296
MvnI	CGCG	2 cut(s)	256, 472
MwoI	GCNNNNNNNGC	4 cut(s)	128, 172, 305, 1117
NciI	CCSGG	2 cut(s)	192, 247
NdeII	GATC	5 cut(s)	201, 322, 367, 730, 1096
NheI	GCTAGC	1 cut(s)	650
NlaIII	CATG	9 cut(s)	82, 142, 286, 356, 553, 644, 766, 921, 1117
NlaIV	GGNNCC	5 cut(s)	111, 174, 186, 534, 629
NmuCI	GTSAC	3 cut(s)	675, 703, 1063
NspI	RCATGY	2 cut(s)	644, 766
PaeI	GCATGC	1 cut(s)	766
PaeR7I	CTCGAG	1 cut(s)	419
PagI	TCATGA	1 cut(s)	352
PcsI	WCGNNNNNNNCGW	1 cut(s)	1059
PctI	GAATGC	2 cut(s)	606, 669
PflFI	GACNNNGTC	2 cut(s)	557, 1058
PflMI	CCANNNNNTGG	1 cut(s)	166
PkrI	GCNGC	5 cut(s)	6, 184, 215, 253, 834
PleI	GAGTC	4 cut(s)	118, 433, 589, 1025
PmaCI	CACGTG	1 cut(s)	1075
PmlI	CACGTG	1 cut(s)	1075
PpsI	GAGTC	4 cut(s)	118, 433, 589, 1025
Ppu21I	YACGTR	1 cut(s)	1075
PpuMI	RGGWCCY	1 cut(s)	801
Psp124BI	GAGCTC	1 cut(s)	146
Psp5II	RGGWCCY	1 cut(s)	801
Psp6I	CCWGG	2 cut(s)	159, 294
PspCI	CACGTG	1 cut(s)	1075
PspEI	GGTNACC	1 cut(s)	921
PspGI	CCWGG	2 cut(s)	159, 294
PspN4I	GGNNCC	5 cut(s)	111, 174, 186, 534, 629
PspPI	GGNCC	2 cut(s)	184, 801
PspPPI	RGGWCCY	1 cut(s)	801
PspXI	VCTCGAGB	1 cut(s)	419
PstNI	CAGNNNCTG	2 cut(s)	55, 166
PsyI	GACNNNGTC	2 cut(s)	557, 1058
RsaI	GTAC	3 cut(s)	116, 534, 944
RsaNI	GTAC	3 cut(s)	115, 533, 943
SacI	GAGCTC	1 cut(s)	146
SaqAI	TTAA	2 cut(s)	428, 465
SatI	GCNGC	5 cut(s)	5, 183, 214, 252, 833
Sau3AI	GATC	5 cut(s)	201, 322, 367, 730, 1096
Sau96I	GGNCC	2 cut(s)	184, 801
SchI	GAGTC	4 cut(s)	118, 433, 590, 1025
ScrFI	CCNGG	4 cut(s)	161, 192, 247, 296
SduI	GDGCHC	5 cut(s)	146, 177, 480, 869, 1080
SexAI	ACCWGGT	1 cut(s)	159
SfaNI	GCATC	3 cut(s)	492, 739, 884
Sfr274I	CTCGAG	1 cut(s)	419
SinI	GGWCC	1 cut(s)	801
SlaI	CTCGAG	1 cut(s)	419
SmlI	CTYRAG	1 cut(s)	419
SmoI	CTYRAG	1 cut(s)	419
SpeI	ACTAGT	1 cut(s)	1012
SphI	GCATGC	1 cut(s)	766
Sse9I	AATT	5 cut(s)	326, 692, 723, 768, 1083
SsiI	CCGC	5 cut(s)	170, 182, 213, 256, 992
SspMI	CTAG	4 cut(s)	371, 539, 651, 1013
SstI	GAGCTC	1 cut(s)	146
StyD4I	CCNGG	4 cut(s)	159, 190, 245, 294
StyI	CCWWGG	1 cut(s)	738
TaaI	ACNGT	3 cut(s)	494, 524, 685
TaiI	ACGT	2 cut(s)	561, 1077
TaqI	TCGA	7 cut(s)	218, 401, 420, 598, 1024, 1034, 1053
TasI	AATT	5 cut(s)	326, 692, 723, 768, 1083
TatI	WGTACW	1 cut(s)	942
TauI	GCSGC	2 cut(s)	185, 216
Tru1I	TTAA	2 cut(s)	428, 465
Tru9I	TTAA	2 cut(s)	428, 465
TscAI	CASTG	4 cut(s)	915, 942, 1044, 1138
TseFI	GTSAC	3 cut(s)	675, 703, 1063
TseI	GCWGC	3 cut(s)	4, 251, 832
Tsp45I	GTSAC	3 cut(s)	675, 703, 1063
TspDTI	ATGAA	2 cut(s)	341, 672
TspGWI	ACGGA	1 cut(s)	102
TspRI	CASTG	4 cut(s)	915, 942, 1044, 1138
Tth111I	GACNNNGTC	2 cut(s)	557, 1058
Van91I	CCANNNNNTGG	1 cut(s)	166
VneI	GTGCAC	1 cut(s)	1076
VpaK11BI	GGWCC	1 cut(s)	801
XapI	RAATTY	1 cut(s)	1083
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	2 cut(s)	644, 766
XcmI	CCANNNNNNNNNTGG	2 cut(s)	145, 163
XhoI	CTCGAG	1 cut(s)	419
XspI	CTAG	4 cut(s)	371, 539, 651, 1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.