Rroxscaffold_2G00102350

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
24472288 .. 24476294
4007 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00102350.1

Sequence Viewer

Length: 3207 bp
ATGGATCAAAGTTTTGAACTCTGTTTGGTGGGGGTGCTCCTTGCATTGGTATCCGCTCTAAACACTGAAATATTGGTAAGAACCCACAACATTGACATTCTTGATGTACTGACATGGCCAGTCAACTTTTTACTTCTCATATGTGCTGTTAGAAACCTCCGTCATTGTTTTTACCAACATACACGAGATCCTAACAGCCTATCTGAGCCTCTATTAGCCAAAAGGTTTGCTGGAGAGAGCCAGCAATCAGAACTAGACCGAGCCAGTTTCCTAAGCAAATTGACATTTTCTTGGATCAGCCCTTTACTCAACTTAGGTTCCTCGAAAACGTTAGCTCTTGAAGACATCCCATCACTGGTTAAAGAAGATAAAGCAAATTTAGCATTCCAGAAGTTTGCTCGAGCATGGGATTCACTATCTGCGGAGAAGAACTCCAGCAATACCAGGAACCTGGTTCTGAGAGCAATAGCAAACGTTTACATGAAAGAAAATTTATTTATAGCCTTTTGTGCAATCCTCAGAACAATTTCAGTTGTAGTTTCTCCTCTTATAGTGTATGCTTTTATAAATTATTCAAATGTCGAGGAGGAAAATGTCTCCAAAGGCCTCATCATAGTGGGGTGTCTAATTCTTTCCAAGGTGGTTGAATCTTTGAGCCAGAGATATTGGTTCTTTGAGTCTAGGAGGTCTGGAATGAGAATGAGGTCGGCTTTGATGGTGGCTGTTTATCGAAAGCAGCTAAAGCTTTCTACTGTGGGAAGGAGAAGGCACTCAGCAGGAGAGATTGTGAATTACATAGCAGTTGATGCCTATCGAATGGGTGAGTTCCCGTGGTGGTTTCATTCAACATGGAGCCTTGCATTGCAATTATTCCTTGCCATTGGTGTTCTTTTCTGGGTGGTTGGTCTTGGTGCTCTTCCTGGATTAGTACCTCTCATTGCCTGTGGCCTCCTAAATGTGCCATTTGCAAAAGTTCTTCAGAAGTGTCAGTCCCAGTTCATGATAGCTCAGGACGAGAGGCTTAGAGCCACTTCTGAGATCCTAAACAGTATGAAAATCATCAAGTTACAATCATGGGAGGAGAAATTCAAGAACTTGGTTGATTCACTTCGTGAAAGAGAGTTCAAACGGTTGGCTGAGACGCAATTTAAAAAGGCTTATGGACCTCTAGTGTATTGGATGTCACCAACCATAATCACTTCAGTAATCTTTGTAGGATGTTTCCTTTTCCAAAGTGTCCCTCTAAATGCAAGTACCATATTTACAGTGCTTGCTTCATTAAGGAGCATGGGAGAACCTGTCAGAATGATACCAGAGGCTCTTTCAGTACTGATTCAAGTCAAGGTCTCTTTTGACCGGCTAAATACATTTTTACTTGATGATGAGGTAAATGATAATGAAATAAAGAAATTACCATCACAAGATTCTGAAGAGAGCTTGAAAATAGATAAAGGCATGTTCAGTTGGTATGCTGAATCATCAATTCCAACTCTGAGAGATTTAAATTTGGAAATCCATAGGAACCAGAAAATTGCAGTTTGTGGACCAGTTGGTGCTGGAAAGTCATCACTTTTATACGCTATACTGGGAGAGATGCCGAAAGTTTCAGGAACTGTTGATGTATTTGGGACCATAGCCTATGTTTCTCAGAATTCTTGGATACAAAGTGGGACAGTTCGTGATAACATTCTCTACGGGAAAACAATGGAGAAGAATAAGTATGAAAAGACCATAGAAGCTTGTGCTTTGGATAAGGACCTTAGTAGTTTTGACCATGGTGATCTTACTGAAATAGGCGAGAGAGGACTTAACTTGAGCGGAGGACAGAAGCAGAGGATTCAGCTGGCGCGAGCTGTTTATAGTGATGCTGATATCTATCTCCTTGATGACCCCTTTAGTGCCGTGGATGCACATACAGCTGCAATTCTATTTCATGATTATGTAATGGCTGCTCTGGCACAGAAAACTGTAATTCTAGTGACTCATCAAGTTGAATTTCTCTCAAAAGTCGATAAGATTTTGGTAATGGAACATGGACAAATTACTGAATCAGGAACCTTTGAGAATCTCTTGACAGCAGGAACAGCGTTTGAGCAACTTGTTAATGCTCACCGAGATGCAGTGACATCAGGTACTTCAAATTATCAAAGTCAGGGAGCATTCAAGAAGGAAGAAATGGTTGTTCCGGAGGAGTCCTTTCGGATTAACCTCAATGAAGATAGCAGTGAAGGGGATATTTCTGCGAAGGGCGTACCTGGGGTGCAACTAATAGAAGAAGAAGAGAAAGAGACCGTTTCAACGTTTAGTGCTATCTTTGTTCATCTAAGGTCATACCTTGCAGCCCTTGTTGGATTGAAAGCTTCTAAAGCATTTTTCTCTGGTTTCACTGATGCTATCTTTAAGGCTCCCATGCTTTTCTTTGACTCAACTCCTGTTGGGCGAATTTTAACACGAGCTTCATCAGATTTAAGTATTTTGGATTTTGACATACCCTTCTCCATTTTCTTTATTGTTGCTGGTGGCATTGAAATGCTGACAACAATTGGAATTATGGCTTCTGTCACATGGCAAGTTCTTATTGTAGCCATTCTCGCCATGGTTGCTGCCAAATATGTTCAGGTGGATTTGAATTTCACGTCTGCAAGAGAATTGATAAGAATCAATGGAACAACCAAAGCTCCTGTAATGAATTATGCAGCTGAGACATCACTCGGAGTGTTCACTATAAGAGCTTTTAAAATGGTAGACAGGTTCTTTGACAACTATACAAAGCTAGTTGACACTGATGCAAGGCTCTTTTTTCATTCTAATGCAACCATGGAGTGGTTAATAATAAGGACAGAAGCACTTCAGAATTTGACCCTTTTCGCTGCTGCTTTACTCCTCATTTTACTTCCCAAGGGTTATGTTGCTCCAGGGCTTGTGGGGCTTTCTCTTTCTTATTCTTTGACACTGACCGGAGCACAAATATTTGTGACTCGATGGTATTGCAACTTATCGAATTACATTATATCAGTTGAAAGGATAAAACAGTTCATGCAGATTTCACCAGAGCCTCCAGCAATTGTGGAGGACAAGAGGCCCCCATATTCATGGCCTCGAAAGGGTAGAATAGAGCTTTATTCACTGAAGGTAAGATATGCTTTAGTAATCCACATGAGCTTCCTGCTGATGGACCACTTATCAATTGATCACTACAAATTCTAA

Protein Analysis

1068

Amino Acids

119.8

Weight (kDa)

6.66

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 166 - 427 1.8e-24 ABC transporter transmembrane region
ABC_tran PF00005 498 - 632 5.9e-21 ABC transporter
ABC_membrane PF00664 768 - 988 3.7e-21 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 566
AccB7I CCANNNNNTGG 1 cut(s) 2823
AccBSI CCGCTC 2 cut(s) 56, 1818
AccI GTMKAC 1 cut(s) 2745
AccII CGCG 1 cut(s) 1849
AccIII TCCGGA 1 cut(s) 2185
AciI CCGC 3 cut(s) 54, 422, 1818
AclI AACGTT 3 cut(s) 329, 474, 2300
AclWI GGATC 4 cut(s) 12, 182, 302, 1033
AcoI YGGCCR 1 cut(s) 116
AcuI CTGAAG 5 cut(s) 962, 1185, 1449, 2834, 3149
AdeI CACNNNGTG 1 cut(s) 1112
AfaI GTAC 6 cut(s) 108, 930, 1255, 1329, 2134, 2253
AfiI CCNNNNNNNGG 5 cut(s) 46, 355, 2823, 3104, 3172
AjiI CACGTC 1 cut(s) 2637
AjnI CCWGG 5 cut(s) 443, 450, 919, 2254, 2914
Alw21I GWGCWC 3 cut(s) 39, 916, 2965
Alw26I GTCTC 5 cut(s) 601, 1133, 1351, 2282, 2696
AlwI GGATC 4 cut(s) 12, 182, 302, 1033
AlwNI CAGNNNCTG 1 cut(s) 1613
Ama87I CYCGRG 1 cut(s) 399
Aor13HI TCCGGA 1 cut(s) 2185
AoxI GGCC 5 cut(s) 116, 604, 946, 3080, 3095
ApeKI GCWGC 8 cut(s) 736, 1919, 1949, 2339, 2603, 2696, 2870, 2873
ArsI GACNNNNNNTTYG 2 cut(s) 2738, 2770
Asp700I GAANNNNTTC 2 cut(s) 526, 2847
AspLEI GCGC 1 cut(s) 1849
AspS9I GGNCC 6 cut(s) 1163, 1544, 1629, 1756, 3081, 3175
AsuHPI GGTGA 5 cut(s) 833, 1176, 1790, 2102, 3039
AvaI CYCGRG 1 cut(s) 399
AvaII GGWCC 5 cut(s) 1163, 1544, 1629, 1756, 3175
BalI TGGCCA 1 cut(s) 118
BauI CACGAG 2 cut(s) 183, 2451
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 3 cut(s) 39, 916, 2965
BbvI GCAGC 8 cut(s) 748, 1906, 1936, 2351, 2590, 2708, 2857, 2860
BccI CCATC 5 cut(s) 358, 709, 1423, 2976, 3166
BceAI ACGGC 1 cut(s) 1886
BcgI CGANNNNNNTGC 2 cut(s) 2970, 3004
BciT130I CCWGG 5 cut(s) 445, 452, 921, 2256, 2916
BciVI GTATCC 2 cut(s) 61, 1653
BclI TGATCA 1 cut(s) 3190
BcoDI GTCTC 5 cut(s) 601, 1133, 1351, 2282, 2696
BfaI CTAG 5 cut(s) 254, 681, 1169, 1976, 2774
BfuI GTATCC 2 cut(s) 61, 1653
BisI GCNGC 8 cut(s) 737, 1920, 1950, 2340, 2604, 2697, 2871, 2874
BlsI GCNGC 8 cut(s) 738, 1921, 1951, 2341, 2605, 2698, 2872, 2875
BmcAI AGTACT 1 cut(s) 1329
Bme1390I CCNGG 5 cut(s) 445, 452, 921, 2256, 2916
Bme18I GGWCC 5 cut(s) 1163, 1544, 1629, 1756, 3175
BmeT110I CYCGRG 1 cut(s) 399
BmgBI CACGTC 1 cut(s) 2637
BmgT120I GGNCC 6 cut(s) 1163, 1544, 1629, 1756, 3081, 3175
BmiI GGNNCC 8 cut(s) 319, 449, 854, 1523, 1630, 2056, 2406, 3083
BmrFI CCNGG 5 cut(s) 445, 452, 921, 2256, 2916
BmrI ACTGGG 2 cut(s) 988, 1595
BmsI GCATC 7 cut(s) 796, 1584, 1855, 1897, 2107, 2380, 2776
BmuI ACTGGG 2 cut(s) 988, 1595
BpiI GAAGAC 1 cut(s) 348
BplI GAGNNNNNCTC 2 cut(s) 416, 448
BpmI CTGGAG 4 cut(s) 252, 418, 2898, 3042
Bpu10I CCTNAGC 2 cut(s) 272, 1008
BpuEI CTTGAG 1 cut(s) 1834
BsaBI GATNNNNATC 3 cut(s) 810, 1875, 2657
BsaI GGTCTC 2 cut(s) 1351, 2282
BsaJI CCNNGG 9 cut(s) 636, 830, 1774, 1902, 2255, 2595, 2817, 2898, 2915
BsaWI WCCGGW 2 cut(s) 2185, 2957
BsaXI ACNNNNNCTCC 6 cut(s) 771, 801, 1284, 1314, 2662, 2692
Bsc4I CCNNNNNNNGG 5 cut(s) 46, 355, 2823, 3104, 3172
Bse118I RCCGGY 1 cut(s) 1356
Bse1I ACTGG 6 cut(s) 119, 264, 360, 994, 1547, 1590
Bse3DI GCAATG 2 cut(s) 860, 936
Bse8I GATNNNNATC 3 cut(s) 810, 1875, 2657
BseAI TCCGGA 1 cut(s) 2185
BseBI CCWGG 5 cut(s) 445, 452, 921, 2256, 2916
BseDI CCNNGG 9 cut(s) 636, 830, 1774, 1902, 2255, 2595, 2817, 2898, 2915
BseGI GGATG 4 cut(s) 345, 1185, 1223, 1912
BseJI GATNNNNATC 3 cut(s) 810, 1875, 2657
BseLI CCNNNNNNNGG 5 cut(s) 46, 355, 2823, 3104, 3172
BseMI GCAATG 2 cut(s) 860, 936
BseNI ACTGG 6 cut(s) 119, 264, 360, 994, 1547, 1590
BseRI GAGGAG 5 cut(s) 534, 599, 1094, 2204, 2873
BseXI GCAGC 8 cut(s) 748, 1906, 1936, 2351, 2590, 2708, 2857, 2860
Bsh1236I CGCG 1 cut(s) 1849
BshFI GGCC 5 cut(s) 118, 606, 948, 3082, 3097
BsiHKAI GWGCWC 3 cut(s) 39, 916, 2965
BsiHKCI CYCGRG 1 cut(s) 399
BsiSI CCGG 3 cut(s) 1357, 2186, 2958
BslFI GGGAC 4 cut(s) 976, 1223, 1642, 1684
BslI CCNNNNNNNGG 5 cut(s) 46, 355, 2823, 3104, 3172
BsmAI GTCTC 5 cut(s) 601, 1133, 1351, 2282, 2696
BsmBI CGTCTC 1 cut(s) 1133
BsmFI GGGAC 4 cut(s) 976, 1223, 1642, 1684
BsmI GAATGC 2 cut(s) 383, 2159
BsnI GGCC 5 cut(s) 118, 606, 948, 3082, 3097
Bso31I GGTCTC 2 cut(s) 1351, 2282
BsoBI CYCGRG 1 cut(s) 399
Bsp1286I GDGCHC 3 cut(s) 39, 916, 2965
Bsp13I TCCGGA 1 cut(s) 2185
Bsp143I GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
Bsp19I CCATGG 3 cut(s) 1774, 2595, 2817
BspACI CCGC 3 cut(s) 54, 422, 1818
BspANI GGCC 5 cut(s) 118, 606, 948, 3082, 3097
BspEI TCCGGA 1 cut(s) 2185
BspFNI CGCG 1 cut(s) 1849
BspHI TCATGA 2 cut(s) 999, 1933
BspLI GGNNCC 8 cut(s) 319, 449, 854, 1523, 1630, 2056, 2406, 3083
BspPI GGATC 4 cut(s) 12, 182, 302, 1033
BspQI GCTCTTC 1 cut(s) 921
BspTNI GGTCTC 2 cut(s) 1351, 2282
BsrBI CCGCTC 2 cut(s) 56, 1818
BsrDI GCAATG 2 cut(s) 860, 936
BsrFI RCCGGY 1 cut(s) 1356
BsrI ACTGG 6 cut(s) 119, 264, 360, 994, 1547, 1590
BssAI RCCGGY 1 cut(s) 1356
BssECI CCNNGG 9 cut(s) 636, 830, 1774, 1902, 2255, 2595, 2817, 2898, 2915
BssMI GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
BssSI CACGAG 2 cut(s) 183, 2451
BssT1I CCWWGG 5 cut(s) 636, 1774, 2595, 2817, 2898
Bst2BI CACGAG 2 cut(s) 183, 2451
Bst2UI CCWGG 5 cut(s) 445, 452, 921, 2256, 2916
Bst4CI ACNGT 9 cut(s) 754, 1049, 1131, 1267, 1615, 1675, 1969, 2293, 3033
Bst6I CTCTTC 3 cut(s) 921, 1425, 2274
BstAPI GCANNNNNTGC 1 cut(s) 806
BstC8I GCNNGC 4 cut(s) 242, 1272, 1845, 1851
BstDSI CCRYGG 5 cut(s) 830, 1774, 1902, 2595, 2817
BstF5I GGATG 4 cut(s) 345, 1185, 1223, 1912
BstFNI CGCG 1 cut(s) 1849
BstHHI GCGC 1 cut(s) 1849
BstKTI GATC 6 cut(s) 7, 190, 297, 1041, 1783, 3193
BstMAI GTCTC 5 cut(s) 601, 1133, 1351, 2282, 2696
BstMBI GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
BstNI CCWGG 5 cut(s) 445, 452, 921, 2256, 2916
BstNSI RCATGY 1 cut(s) 1459
BstSCI CCNGG 5 cut(s) 443, 450, 919, 2254, 2914
BstUI CGCG 1 cut(s) 1849
BstV1I GCAGC 8 cut(s) 748, 1906, 1936, 2351, 2590, 2708, 2857, 2860
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 2 cut(s) 187, 1038
BstXI CCANNNNNNTGG 2 cut(s) 451, 3093
BstYI RGATCY 2 cut(s) 187, 1038
BsuI GTATCC 2 cut(s) 61, 1653
BsuRI GGCC 5 cut(s) 118, 606, 948, 3082, 3097
BtgI CCRYGG 5 cut(s) 830, 1774, 1902, 2595, 2817
BtrI CACGTC 1 cut(s) 2637
BtsCI GGATG 4 cut(s) 345, 1185, 1223, 1912
BtsI GCAGTG 2 cut(s) 2127, 2230
BtsIMutI CAGTG 9 cut(s) 63, 353, 1272, 2127, 2230, 2385, 2781, 2951, 3125
Cac8I GCNNGC 4 cut(s) 242, 1272, 1845, 1851
CaiI CAGNNNCTG 1 cut(s) 1613
CciI TCATGA 2 cut(s) 999, 1933
CfoI GCGC 1 cut(s) 1849
Cfr10I RCCGGY 1 cut(s) 1356
Cfr13I GGNCC 6 cut(s) 1163, 1544, 1629, 1756, 3081, 3175
CseI GACGC 1 cut(s) 1150
CsiI ACCWGGT 1 cut(s) 450
Csp6I GTAC 6 cut(s) 107, 929, 1254, 1328, 2133, 2252
CviQI GTAC 6 cut(s) 107, 929, 1254, 1328, 2133, 2252
DpnI GATC 6 cut(s) 6, 189, 296, 1040, 1782, 3192
DpnII GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
DraI TTTAAA 3 cut(s) 1150, 1503, 2737
DraIII CACNNNGTG 1 cut(s) 1112
EaeI YGGCCR 1 cut(s) 116
Eam1104I CTCTTC 3 cut(s) 921, 1425, 2274
EarI CTCTTC 3 cut(s) 921, 1425, 2274
Eco130I CCWWGG 5 cut(s) 636, 1774, 2595, 2817, 2898
Eco147I AGGCCT 1 cut(s) 606
Eco31I GGTCTC 2 cut(s) 1351, 2282
Eco32I GATATC 1 cut(s) 1873
Eco47I GGWCC 5 cut(s) 1163, 1544, 1629, 1756, 3175
Eco57I CTGAAG 5 cut(s) 962, 1185, 1449, 2834, 3149
Eco88I CYCGRG 1 cut(s) 399
EcoO109I RGGNCCY 2 cut(s) 1756, 3081
EcoRI GAATTC 1 cut(s) 1651
EcoRII CCWGG 5 cut(s) 443, 450, 919, 2254, 2914
EcoRV GATATC 1 cut(s) 1873
EcoT14I CCWWGG 5 cut(s) 636, 1774, 2595, 2817, 2898
ErhI CCWWGG 5 cut(s) 636, 1774, 2595, 2817, 2898
Esp3I CGTCTC 1 cut(s) 1133
FalI AAGNNNNNCTT 2 cut(s) 3127, 3159
FaqI GGGAC 4 cut(s) 976, 1223, 1642, 1684
FauNDI CATATG 1 cut(s) 140
FbaI TGATCA 1 cut(s) 3190
FblI GTMKAC 1 cut(s) 2745
Fnu4HI GCNGC 8 cut(s) 737, 1920, 1950, 2340, 2604, 2697, 2871, 2874
FokI GGATG 4 cut(s) 332, 1192, 1230, 1919
Fsp4HI GCNGC 8 cut(s) 737, 1920, 1950, 2340, 2604, 2697, 2871, 2874
FspBI CTAG 5 cut(s) 254, 681, 1169, 1976, 2774
GlaI GCGC 1 cut(s) 1848
GluI GCNGC 8 cut(s) 737, 1920, 1950, 2340, 2604, 2697, 2871, 2874
GsuI CTGGAG 4 cut(s) 252, 418, 2898, 3042
HaeIII GGCC 5 cut(s) 118, 606, 948, 3082, 3097
HapII CCGG 3 cut(s) 1357, 2186, 2958
HgaI GACGC 1 cut(s) 1150
HhaI GCGC 1 cut(s) 1849
Hin6I GCGC 1 cut(s) 1847
HinP1I GCGC 1 cut(s) 1847
HincII GTYRAC 2 cut(s) 124, 2779
HindII GTYRAC 2 cut(s) 124, 2779
HindIII AAGCTT 3 cut(s) 743, 1737, 2358
HpaII CCGG 3 cut(s) 1357, 2186, 2958
HphI GGTGA 5 cut(s) 833, 1176, 1790, 2102, 3039
Hpy166II GTNNAC 6 cut(s) 124, 478, 1544, 2721, 2746, 2779
Hpy8I GTNNAC 6 cut(s) 124, 478, 1544, 2721, 2746, 2779
HpyAV CCTTC 7 cut(s) 753, 759, 2161, 2222, 2239, 2503, 3124
HpyCH4III ACNGT 9 cut(s) 754, 1049, 1131, 1267, 1615, 1675, 1969, 2293, 3033
HpyCH4IV ACGT 4 cut(s) 329, 474, 2300, 2636
HpySE526I ACGT 4 cut(s) 329, 474, 2300, 2636
HspAI GCGC 1 cut(s) 1847
Kpn2I TCCGGA 1 cut(s) 2185
Ksp22I TGATCA 1 cut(s) 3190
Kzo9I GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
LguI GCTCTTC 1 cut(s) 921
LmnI GCTCC 8 cut(s) 42, 852, 1284, 2156, 2410, 2683, 2917, 2960
Lsp1109I GCAGC 8 cut(s) 748, 1906, 1936, 2351, 2590, 2708, 2857, 2860
LweI GCATC 7 cut(s) 796, 1584, 1855, 1897, 2107, 2380, 2776
MabI ACCWGGT 1 cut(s) 450
MaeI CTAG 5 cut(s) 254, 681, 1169, 1976, 2774
MaeII ACGT 4 cut(s) 329, 474, 2300, 2636
MaeIII GTNAC 6 cut(s) 1065, 1182, 1978, 2122, 2560, 2974
MalI GATC 6 cut(s) 6, 189, 296, 1040, 1782, 3192
MbiI CCGCTC 2 cut(s) 56, 1818
MboI GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
MfeI CAATTG 3 cut(s) 2541, 3063, 3186
MflI RGATCY 2 cut(s) 187, 1038
MhlI GDGCHC 3 cut(s) 39, 916, 2965
MlsI TGGCCA 1 cut(s) 118
MluNI TGGCCA 1 cut(s) 118
MlyI GAGTC 5 cut(s) 686, 1975, 2201, 2417, 2971
MmeI TCCRAC 2 cut(s) 1511, 2329
Mox20I TGGCCA 1 cut(s) 118
MroI TCCGGA 1 cut(s) 2185
MroXI GAANNNNTTC 2 cut(s) 526, 2847
MscI TGGCCA 1 cut(s) 118
MslI CAYNNNNRTG 6 cut(s) 614, 1938, 2115, 2528, 2808, 3091
Msp20I TGGCCA 1 cut(s) 118
MspA1I CMGCKG 3 cut(s) 1843, 1919, 2699
MspI CCGG 3 cut(s) 1357, 2186, 2958
MspR9I CCNGG 5 cut(s) 445, 452, 921, 2256, 2916
MunI CAATTG 3 cut(s) 2541, 3063, 3186
Mva1269I GAATGC 2 cut(s) 383, 2159
MvaI CCWGG 5 cut(s) 445, 452, 921, 2256, 2916
MvnI CGCG 1 cut(s) 1849
NcoI CCATGG 3 cut(s) 1774, 2595, 2817
NdeI CATATG 1 cut(s) 140
NdeII GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
NlaIV GGNNCC 8 cut(s) 319, 449, 854, 1523, 1630, 2056, 2406, 3083
NmuCI GTSAC 5 cut(s) 1182, 1978, 2122, 2560, 2974
NspI RCATGY 1 cut(s) 1459
PaeR7I CTCGAG 1 cut(s) 399
PagI TCATGA 2 cut(s) 999, 1933
PceI AGGCCT 1 cut(s) 606
PciSI GCTCTTC 1 cut(s) 921
PctI GAATGC 2 cut(s) 383, 2159
PdmI GAANNNNTTC 2 cut(s) 526, 2847
PflMI CCANNNNNTGG 1 cut(s) 2823
PfoI TCCNGGA 1 cut(s) 919
PkrI GCNGC 8 cut(s) 738, 1921, 1951, 2341, 2605, 2698, 2872, 2875
PleI GAGTC 5 cut(s) 685, 1975, 2200, 2417, 2971
PpsI GAGTC 5 cut(s) 685, 1975, 2200, 2417, 2971
PpuMI RGGWCCY 1 cut(s) 1756
PsiI TTATAA 1 cut(s) 566
Psp1406I AACGTT 3 cut(s) 329, 474, 2300
Psp5II RGGWCCY 1 cut(s) 1756
Psp6I CCWGG 5 cut(s) 443, 450, 919, 2254, 2914
PspGI CCWGG 5 cut(s) 443, 450, 919, 2254, 2914
PspN4I GGNNCC 8 cut(s) 319, 449, 854, 1523, 1630, 2056, 2406, 3083
PspPI GGNCC 6 cut(s) 1163, 1544, 1629, 1756, 3081, 3175
PspPPI RGGWCCY 1 cut(s) 1756
PspXI VCTCGAGB 1 cut(s) 399
PstNI CAGNNNCTG 1 cut(s) 1613
PsuI RGATCY 2 cut(s) 187, 1038
PvuII CAGCTG 3 cut(s) 1843, 1919, 2699
RsaI GTAC 6 cut(s) 108, 930, 1255, 1329, 2134, 2253
RsaNI GTAC 6 cut(s) 107, 929, 1254, 1328, 2133, 2252
RseI CAYNNNNRTG 6 cut(s) 614, 1938, 2115, 2528, 2808, 3091
SapI GCTCTTC 1 cut(s) 921
SatI GCNGC 8 cut(s) 737, 1920, 1950, 2340, 2604, 2697, 2871, 2874
Sau3AI GATC 6 cut(s) 4, 187, 294, 1038, 1780, 3190
Sau96I GGNCC 6 cut(s) 1163, 1544, 1629, 1756, 3081, 3175
ScaI AGTACT 1 cut(s) 1329
SchI GAGTC 5 cut(s) 686, 1975, 2201, 2417, 2971
ScrFI CCNGG 5 cut(s) 445, 452, 921, 2256, 2916
SduI GDGCHC 3 cut(s) 39, 916, 2965
SexAI ACCWGGT 1 cut(s) 450
SfaNI GCATC 7 cut(s) 796, 1584, 1855, 1897, 2107, 2380, 2776
Sfr274I CTCGAG 1 cut(s) 399
SinI GGWCC 5 cut(s) 1163, 1544, 1629, 1756, 3175
SlaI CTCGAG 1 cut(s) 399
SmiI ATTTAAAT 1 cut(s) 1503
SmiMI CAYNNNNRTG 6 cut(s) 614, 1938, 2115, 2528, 2808, 3091
SmlI CTYRAG 2 cut(s) 399, 1813
SmoI CTYRAG 2 cut(s) 399, 1813
SseBI AGGCCT 1 cut(s) 606
SsiI CCGC 3 cut(s) 54, 422, 1818
SspI AATATT 2 cut(s) 72, 2970
SspMI CTAG 5 cut(s) 254, 681, 1169, 1976, 2774
StuI AGGCCT 1 cut(s) 606
StyD4I CCNGG 5 cut(s) 443, 450, 919, 2254, 2914
StyI CCWWGG 5 cut(s) 636, 1774, 2595, 2817, 2898
SwaI ATTTAAAT 1 cut(s) 1503
TaaI ACNGT 9 cut(s) 754, 1049, 1131, 1267, 1615, 1675, 1969, 2293, 3033
TaiI ACGT 4 cut(s) 332, 477, 2303, 2639
TaqI TCGA 9 cut(s) 323, 400, 582, 730, 814, 2010, 2980, 2999, 3100
TaqII GACCGA 1 cut(s) 273
TatI WGTACW 2 cut(s) 106, 1327
TscAI CASTG 9 cut(s) 70, 360, 1272, 2127, 2230, 2392, 2788, 2958, 3132
TseFI GTSAC 5 cut(s) 1182, 1978, 2122, 2560, 2974
TseI GCWGC 8 cut(s) 736, 1919, 1949, 2339, 2603, 2696, 2870, 2873
Tsp45I GTSAC 5 cut(s) 1182, 1978, 2122, 2560, 2974
TspGWI ACGGA 1 cut(s) 149
TspRI CASTG 9 cut(s) 70, 360, 1272, 2127, 2230, 2392, 2788, 2958, 3132
Van91I CCANNNNNTGG 1 cut(s) 2823
VpaK11BI GGWCC 5 cut(s) 1163, 1544, 1629, 1756, 3175
XceI RCATGY 1 cut(s) 1459
XcmI CCANNNNNNNNNTGG 1 cut(s) 2593
XhoI CTCGAG 1 cut(s) 399
XmiI GTMKAC 1 cut(s) 2745
XmnI GAANNNNTTC 2 cut(s) 526, 2847
XspI CTAG 5 cut(s) 254, 681, 1169, 1976, 2774
ZrmI AGTACT 1 cut(s) 1329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.