Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001001

Physical Location & Seq

Genomic Coordinates Forward (+)

29358680 .. 29364450

Gene Structure 5771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g37260.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3783 bp

ATGGATGGCAACCTATCTGAGCCTTTACTAGCCAAAACAAAACTAGACCATGCCAGCTTCCTTAGCAGACTGACATTTTCTTGGGTCAATCCTCTCCTTAAGTTGGGATCCTCAAAAGCATTAGACCTCGAGGACATCCCTTCTCTGGGTTCTGAAGATGAAGCAAATGTAGCATACCAGAAGTTTTCTGATGCATTGGAGTCCCTGTTGAGGGAGAAGAGCTCAAGTAGTACATCGAGGAACTTGGTTCTCAGAGCCATGGCAAGAGTTTACATGAAGGAAAATGTATGGATAATCATTTGTGCATTCCTCAGGACCATTGCTGTTATAGTTTCTCCTCTTATACTCTATGCTTTTGTGAACTATTCAAATAGTGACGATGAAAGTCTCTCTGAAGGCTTCATTATAGTGGGGTATCTAGTTCTTACCAAAGTAGTTGAATCTTTGAGCCAGAGACAGTGGTATTTCGACTCAAGGAGGTCTGGCATGAGAATGAGGTCAGCCTTGATGGTTTCAGTCTATCAAAAGCAGCTGAAGCTTTCTAGTTTGGGAAGGAAAAGGCACTCAGCAGGAGAGATAGTGAATTACATAGCAGTAGACGCTTATCGAATGGGGGAGTTCCTTTGGTGGTTTCATGTGACATGGAGCTTTTCATTGCAGCTATTGCTTTCCATTGTTGTACTTTATCTGGTGGTGGGTGTTGGTGCTCTACCTGGTTTAGTTCCACTTATCATTTTCGGTCTTCTGAATGTCCCATTTGCTAAGGTAATTCAGAAGTGTCAGTCCGAGTTCATGGTAGCTCAGGATGAGAGGCTTAGAGCCACTTCTGAGATCTTAAATAGCATGAAAGTCATTAAGTTACAATCATGGGAAGAGAAATTCAAAAACTTGGTTGATGCCCTTCGCGAAAGAGAGTTCAAACCATTAGCTGAGGCACAATTCCAAAAGGCTTTCGCAACTGTATTGTTTTGGATGTCACCAACCATCATCTCTTCAGTTATTTTTCTAGGATGCATTTTATTCAACAGTGCTCCTCTAAATGCGACTACTATATTCACAATTTTAGCATCATTGAAGAACATGGGGGAACCTGTCAGGATTATACCAGAAGCTCTTTCAGTTATGATACAAGTCAAGGTCTCATTTGATCGGCTGAATGTTTTTCTGCTTGATGATGAGCTAAAGGATAGTGAAAAATGGAAAGCCCCATCACAGAATTCAGATGAGAGCTTACAAATAGTAAGTGGCACGTTCAGCTGGAATCCTGAACTAACAACAATCCCAACTCTGAGAAATGTGAATTTGGAAGTAAAATGGGAGCAGAAAATAGCAGTTTGTGGACCAGTTGGTGCTGGAAAATCATCACTTTTGCATGCTATACTTGGAGAGATGCCCAAAATGTCAGGAATGGTTCATATATTTGGAAGCATAGCCTATGTATCTCAGATTCCTTGGATACAAAGTGGGACGGTTCGTGATAACATACTCTACGGCAAGCCAATGGAGAAGAACAGATATGAGAAGGCCATAAAAGCTTGTGCTTTGGATAAGGATATTACTAGCTTTGATCATGGTGATCTTACTGAAATAGGGCAGAGGGGACTTAACATGAGTGGAGGACAGAAGCAACGGATTCAGCTAGCTCGAGCTGTCTATAATGATGCCGATATCTATCTCCTTGATGATCCCTTTAGTGCAGTGGATGCAAATACAGCTGCAATTCTATTTCATGACTGTGTCATGTCTGCTCTAGCAAAGAAAACTGTAATTCTGGTGACTCATCAAGTTGAATTTCTATCACAAGTTGACAAGATTATGGTAATTGAGGATGGACAAATTACTCAATCTGGAAGCTACGAGAGTCTCTTGACAGCAGGAACTGCATTTGAGAAGCTTGTGAATGCGCACAATGATGCAGTAACAACATTAGGTCCTTCAAACTATCAAGAAGAAGAATTTGAAAAGGAAGATGTGATCCAGCCAGAGTATTATGGGAGTAACAGTGGTGCACCTGTAGTGCAGCTAACAGAAGAAGAAGAGAAGGTGATTGGTGATGTGGGATTAAAGCCCTTTTGGGATTACATTTATCTTTCCAAGGCAACACTTCTTCTATGCTTAGGCACAATAGCACAGATTAGTTTTCTTGGTCTTCAGGTTGCCTCAACTTTGTGGCTAGCTCTAGCCATTCAAATTTCTACAATAACAAACGGTATACTCATCGGAGTTTATACTGCAATATCCACACTTAGTCTTGTCTTTGTATATCTAAGGTCCTACTTCTCAGCCCTTATGGGATTGAAGGCTTCTAGAGCATTTTTCTCTAGTTTCACAGATGCTATCTTCAAGGCTCCCATGCTCTTCTTCGACTCAACTCCTGTCGGACGAATTTTGACACGAGCTTCATCAGATTTTAACATATTAGATCTTGACATACCTTTCACTGCTATCTATGTGATGACTTCTGGTACTGAACTGCTGACAGTGATTGTAATGATGGGTTATGTCACATGGGAAGTTGTCATTGTAGCCATTTTAGCCTTTGTTGCTGCACAATATGTTCAGAGATACTATCTAACCTCTGCAAGGGAGCTGATAAGAATAAATGGAACAACAAAAGCTCCTGTAATAAATTATACAGCTGAGACATCACTTGGAGTGGTCACTATAAGAGCTTTTGGAATGGCTGACAGGTTCTTCCTCAACTTCCTAAAGCTAGTTGACACAGATGCAAGTCTCTTCTTTTACTCCAATGCAACCTTGGAGTGGTTACTTTTGAGAGCAGAAGCACTTCAAAATGTGACCCTTTTCACAGCAGCTTTTCTTCTCATTCTACTTCCCAAGGGTTATGTTTCTCCAGGGCTTGTGGGACTCGCTCTTTCATATGCTTTGACATTAACAACGACGCAACTCTATCAGACTCGATGGTATTGCAATTTATCTAACCACATCATCTCAGTCGAAAGAATAAAACAATTCATGCAGATTTCTCCAGAGCCTCCAGCAATTGTAGAGGACAAGAGGCCGCCGAGTTCATGGCCATTCAAGGGTAGGATCGAGCTGTATTCTCTGAATATAAAATACCGTGAGAACGCTCCACTCGTTCTCAAGGGAATCACATGCACATTCAAGGAAGGAACTAGAGTAGGAGTTGTGGGAAGGACAGGAAGTGGGAAAACTACACTCATTAGTGCTTTGTTTCGATTAGTAGAGCCAAGCAGTGGTAGCATTGTTATAGATGGAATTGACATCTGCTCTATTGGTCTAAAAGATTTGAGAATGAAGCTCAGCATCATCCCTCAAGAACCGGTTCTTTTTAGAGGTAGCATTCGAACCAACTTGGATCCTCTAGGCCTGTACTCTGATGATGAAATATGGACGGCACTAGAGAAGTGTCAGCTTAAGGCAACAGTCAGCAGCCTACCTAATCTACTAGACTCATCTGTGAGTGATGAAGGGGGAAATTGGAGTGCCGGGCAACGCCAGCTGTTTTGCCTTGGAAGAGTGCTTCTTAAGAGGAACAGAATTCTAGTTCTAGATGAGGCTACTGCTTCCATTGATTCTGCAACAGATGCCATTCTTCAAAGAATAATCAGGCTAGAATTTGCAGAATGCACAGTGATAACTGTTGCTCATAGAGTTCCAACAGTTATAGACAGCAACATGGTCATGGTCCTCTCCTATGGGAAGCTGGTGGAGTATGATGAACCCTCAAAGCTCTTGGATACCAATTCCTACTTCTCTAAGCTTGTAGCTGAGTATTGGTCAAGCTGCCATAGAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1261

Amino Acids

140.39

Weight (kDa)

5.94

Isoelectric Point (pI)

36.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	98 - 357	7.1e-28	ABC transporter transmembrane region
ABC_tran	PF00005	430 - 564	2.8e-19	ABC transporter
ABC_membrane	PF00664	720 - 967	7.6e-21	ABC transporter transmembrane region
ABC_tran	PF00005	1035 - 1135	3.7e-16	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21250 AT3G21250 AT3G21250 AT3G21250 AT3G21250 AT3G21250
fragaria_vesca	FvH4_6g33070 FvH4_6g33070 FvH4_6g33070 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260
malus_domestica	MD09G1195100.v1.1 MD14G1118300.v1.1 MD17G1175700.v1.1 MD17G1175800.v1.1
prunus_persica	Prupe.3G051600_v2.0.a1 Prupe.3G051800_v2.0.a1 Prupe.3G051800_v2.0.a1
pyrus_communis	pycom09g11210
rosa_chinensis	RchiOBHm_Chr2g0142721 RchiOBHm_Chr2g0142761 RchiOBHm_Chr2g0142771 RchiOBHm_Chr2g0150061
rosa_laevigata	RLG00000019980 RLG00000019982 RLG00000019984
rosa_multiflora	Rmu_co8521907.1_g000001 Rmu_sc0004112.1_g000013 Rmu_sc0004610.1_g000003
rosa_roxburghii	Rroxscaffold_2G00097480 Rroxscaffold_2G00102330 Rroxscaffold_2G00102350 Rroxscaffold_2G00102380 Rroxscaffold_2G00103380
rosa_rugosa	Rorug02G0374800 Rorug02G0374900 Rorug02G0375000 Rorug02G0375100 Rorug02G0418200
rosa_samantha	Rh1DG425700 Rh2AG427200 Rh2AG427900 Rh2AG428000 Rh2AG477500 Rh2BG437100 Rh2BG437400 Rh2BG437600 Rh2CG463300 Rh2DG446800 Rh2DG447100 Rh2DG447200 Rh2DG447300 Rh2DG447400 Rh2DG498700 Rh7DG155300
rosa_wichuraiana	Rw2G035000 Rw2G035010 Rw2G035020 Rw2G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	128
Acc16I	TGCGCA	1 cut(s)	1905
AccB7I	CCANNNNNTGG	1 cut(s)	3218
AccI	GTMKAC	2 cut(s)	597, 2212
AccII	CGCG	1 cut(s)	906
AciI	CCGC	1 cut(s)	3023
AclWI	GGATC	7 cut(s)	102, 115, 1679, 1969, 3059, 3335, 3348
AcoI	YGGCCR	1 cut(s)	3035
AcsI	RAATTY	9 cut(s)	878, 1216, 1300, 1790, 1955, 2190, 2385, 3522, 3599
AcuI	CTGAAG	5 cut(s)	174, 414, 554, 978, 2135
AfaI	GTAC	4 cut(s)	232, 681, 2467, 3356
AfiI	CCNNNNNNNGG	9 cut(s)	103, 145, 146, 210, 211, 2583, 2763, 3044, 3218
AflII	CTTAAG	3 cut(s)	98, 3398, 3509
AgeI	ACCGGT	1 cut(s)	3304
AjnI	CCWGG	2 cut(s)	712, 2854
AjuI	GAANNNNNNNTTGG	2 cut(s)	3719, 3751
Alw21I	GWGCWC	4 cut(s)	224, 709, 1033, 2011
Alw26I	GTCTC	6 cut(s)	392, 448, 1144, 1868, 2636, 2738
Alw44I	GTGCAC	1 cut(s)	2007
AlwI	GGATC	7 cut(s)	102, 115, 1679, 1969, 3059, 3335, 3348
AlwNI	CAGNNNCTG	1 cut(s)	1880
Ama87I	CYCGRG	2 cut(s)	128, 1644
AoxI	GGCC	4 cut(s)	1524, 3020, 3035, 3349
ApaLI	GTGCAC	1 cut(s)	2007
ApeKI	GCWGC	8 cut(s)	529, 658, 1715, 2020, 2546, 2813, 3414, 3768
ApoI	RAATTY	9 cut(s)	878, 1216, 1300, 1790, 1955, 2190, 2385, 3522, 3599
AsiGI	ACCGGT	1 cut(s)	3304
Asp700I	GAANNNNTTC	2 cut(s)	2787, 3306
AspLEI	GCGC	1 cut(s)	1906
AspS9I	GGNCC	5 cut(s)	315, 1340, 1931, 2271, 3670
AsuC2I	CCSGG	1 cut(s)	3472
AsuHPI	GGTGA	5 cut(s)	969, 1586, 1786, 2056, 2063
AsuII	TTCGAA	1 cut(s)	3328
AsuNHI	GCTAGC	2 cut(s)	1639, 2173
AvaI	CYCGRG	2 cut(s)	128, 1644
AvaII	GGWCC	5 cut(s)	315, 1340, 1931, 2271, 3670
AxyI	CCTNAGG	1 cut(s)	311
BaeGI	GKGCMC	1 cut(s)	2011
BalI	TGGCCA	1 cut(s)	3037
BamHI	GGATCC	2 cut(s)	107, 3340
BanII	GRGCYC	1 cut(s)	224
BauI	CACGAG	1 cut(s)	2394
BbsI	GAAGAC	2 cut(s)	734, 2141
Bbv12I	GWGCWC	4 cut(s)	224, 709, 1033, 2011
BbvCI	CCTCAGC	1 cut(s)	930
BbvI	GCAGC	8 cut(s)	541, 670, 1702, 2032, 2533, 2825, 3426, 3755
BccI	CCATC	7 cut(s)	502, 992, 1216, 1823, 2488, 2916, 3230
BceAI	ACGGC	2 cut(s)	1507, 3393
BcgI	CGANNNNNNTGC	2 cut(s)	2910, 2944
BciT130I	CCWGG	2 cut(s)	714, 2856
BciVI	GTATCC	2 cut(s)	1449, 3715
BclI	TGATCA	1 cut(s)	1567
BcnI	CCSGG	1 cut(s)	3472
BcoDI	GTCTC	6 cut(s)	392, 448, 1144, 1868, 2636, 2738
BfmI	CTRYAG	1 cut(s)	2013
BfrI	CTTAAG	3 cut(s)	98, 3398, 3509
BfuI	GTATCC	2 cut(s)	1449, 3715
BglII	AGATCT	2 cut(s)	831, 2422
BisI	GCNGC	9 cut(s)	530, 659, 1716, 2021, 2547, 2814, 3023, 3415, 3769
BlpI	GCTNAGC	1 cut(s)	3284
BlsI	GCNGC	9 cut(s)	531, 660, 1717, 2022, 2548, 2815, 3024, 3416, 3770
Bme1390I	CCNGG	3 cut(s)	714, 2856, 3472
Bme18I	GGWCC	5 cut(s)	315, 1340, 1931, 2271, 3670
BmeT110I	CYCGRG	2 cut(s)	128, 1644
BmgT120I	GGNCC	5 cut(s)	315, 1340, 1931, 2271, 3670
BmiI	GGNNCC	4 cut(s)	109, 1089, 2349, 3342
BmrFI	CCNGG	3 cut(s)	714, 2856, 3472
BmtI	GCTAGC	2 cut(s)	1643, 2177
BpiI	GAAGAC	2 cut(s)	734, 2141
BplI	GAGNNNNNCTC	2 cut(s)	206, 238
BpmI	CTGGAG	3 cut(s)	2838, 2973, 2982
Bpu10I	CCTNAGC	5 cut(s)	62, 762, 801, 930, 2116
Bpu1102I	GCTNAGC	1 cut(s)	3284
Bpu14I	TTCGAA	1 cut(s)	3328
BpuEI	CTTGAG	4 cut(s)	208, 457, 3089, 3282
BpuMI	CCSGG	1 cut(s)	3472
BsaBI	GATNNNNATC	1 cut(s)	1671
BsaI	GGTCTC	1 cut(s)	1144
BsaJI	CCNNGG	7 cut(s)	258, 1451, 2094, 2757, 2838, 2855, 3493
BsaWI	WCCGGW	1 cut(s)	3304
BsaXI	ACNNNNNCTCC	8 cut(s)	191, 221, 564, 594, 1987, 2017, 2602, 2632
Bsc4I	CCNNNNNNNGG	9 cut(s)	103, 145, 146, 210, 211, 2583, 2763, 3044, 3218
Bse118I	RCCGGY	1 cut(s)	3304
Bse1I	ACTGG	1 cut(s)	1343
Bse21I	CCTNAGG	1 cut(s)	311
Bse3DI	GCAATG	2 cut(s)	318, 653
Bse8I	GATNNNNATC	1 cut(s)	1671
BseBI	CCWGG	2 cut(s)	714, 2856
BseDI	CCNNGG	7 cut(s)	258, 1451, 2094, 2757, 2838, 2855, 3493
BseGI	GGATG	8 cut(s)	10, 135, 811, 978, 1016, 1708, 1834, 3291
BseJI	GATNNNNATC	1 cut(s)	1671
BseLI	CCNNNNNNNGG	9 cut(s)	103, 145, 146, 210, 211, 2583, 2763, 3044, 3218
BseMI	GCAATG	2 cut(s)	318, 653
BseNI	ACTGG	1 cut(s)	1343
BseRI	GAGGAG	2 cut(s)	327, 1023
BseSI	GKGCMC	1 cut(s)	2011
BseXI	GCAGC	8 cut(s)	541, 670, 1702, 2032, 2533, 2825, 3426, 3755
BsgI	GTGCAG	3 cut(s)	1716, 2039, 2532
Bsh1236I	CGCG	1 cut(s)	906
BshFI	GGCC	4 cut(s)	1526, 3022, 3037, 3351
BshTI	ACCGGT	1 cut(s)	3304
BsiHKAI	GWGCWC	4 cut(s)	224, 709, 1033, 2011
BsiHKCI	CYCGRG	2 cut(s)	128, 1644
BsiSI	CCGG	2 cut(s)	3305, 3471
BslFI	GGGAC	5 cut(s)	187, 737, 1480, 1614, 2880
BslI	CCNNNNNNNGG	9 cut(s)	103, 145, 146, 210, 211, 2583, 2763, 3044, 3218
BsmAI	GTCTC	6 cut(s)	392, 448, 1144, 1868, 2636, 2738
BsmFI	GGGAC	5 cut(s)	187, 737, 1480, 1614, 2880
BsmI	GAATGC	4 cut(s)	305, 1906, 3324, 3614
BsnI	GGCC	4 cut(s)	1526, 3022, 3037, 3351
Bso31I	GGTCTC	1 cut(s)	1144
BsoBI	CYCGRG	2 cut(s)	128, 1644
Bsp119I	TTCGAA	1 cut(s)	3328
Bsp1286I	GDGCHC	4 cut(s)	224, 709, 1033, 2011
Bsp1720I	GCTNAGC	1 cut(s)	3284
Bsp19I	CCATGG	1 cut(s)	258
Bsp68I	TCGCGA	1 cut(s)	906
BspACI	CCGC	1 cut(s)	3023
BspANI	GGCC	4 cut(s)	1526, 3022, 3037, 3351
BspFNI	CGCG	1 cut(s)	906
BspHI	TCATGA	1 cut(s)	1729
BspLI	GGNNCC	4 cut(s)	109, 1089, 2349, 3342
BspOI	GCTAGC	2 cut(s)	1643, 2177
BspPI	GGATC	7 cut(s)	102, 115, 1679, 1969, 3059, 3335, 3348
BspQI	GCTCTTC	2 cut(s)	212, 2363
BspT104I	TTCGAA	1 cut(s)	3328
BspTI	CTTAAG	3 cut(s)	98, 3398, 3509
BspTNI	GGTCTC	1 cut(s)	1144
BsrDI	GCAATG	2 cut(s)	318, 653
BsrFI	RCCGGY	1 cut(s)	3304
BsrI	ACTGG	1 cut(s)	1343
BssAI	RCCGGY	1 cut(s)	3304
BssECI	CCNNGG	7 cut(s)	258, 1451, 2094, 2757, 2838, 2855, 3493
BssNAI	GTATAC	1 cut(s)	2213
BssSI	CACGAG	1 cut(s)	2394
BssT1I	CCWWGG	6 cut(s)	258, 1451, 2094, 2757, 2838, 3493
Bst1107I	GTATAC	1 cut(s)	2213
Bst2BI	CACGAG	1 cut(s)	2394
Bst2UI	CCWGG	2 cut(s)	714, 2856
Bst6I	CTCTTC	7 cut(s)	212, 867, 997, 2031, 2363, 2741, 3493
BstAFI	CTTAAG	3 cut(s)	98, 3398, 3509
BstAPI	GCANNNNNTGC	4 cut(s)	664, 1703, 1880, 3569
BstBI	TTCGAA	1 cut(s)	3328
BstC8I	GCNNGC	6 cut(s)	55, 1374, 1496, 1641, 2175, 3482
BstDSI	CCRYGG	1 cut(s)	258
BstENI	CCTNNNNNAGG	1 cut(s)	2581
BstF5I	GGATG	8 cut(s)	10, 135, 811, 978, 1016, 1708, 1834, 3291
BstFNI	CGCG	1 cut(s)	906
BstHHI	GCGC	1 cut(s)	1906
BstMAI	GTCTC	6 cut(s)	392, 448, 1144, 1868, 2636, 2738
BstNI	CCWGG	2 cut(s)	714, 2856
BstNSI	RCATGY	2 cut(s)	1376, 3120
BstSCI	CCNGG	3 cut(s)	712, 2854, 3470
BstSFI	CTRYAG	1 cut(s)	2013
BstSLI	GKGCMC	1 cut(s)	2011
BstUI	CGCG	1 cut(s)	906
BstV1I	GCAGC	8 cut(s)	541, 670, 1702, 2032, 2533, 2825, 3426, 3755
BstV2I	GAAGAC	2 cut(s)	734, 2141
BstX2I	RGATCY	4 cut(s)	107, 831, 2422, 3340
BstYI	RGATCY	4 cut(s)	107, 831, 2422, 3340
BstZ17I	GTATAC	1 cut(s)	2213
Bsu36I	CCTNAGG	1 cut(s)	311
BsuI	GTATCC	2 cut(s)	1449, 3715
BsuRI	GGCC	4 cut(s)	1526, 3022, 3037, 3351
BtgI	CCRYGG	1 cut(s)	258
BtsCI	GGATG	8 cut(s)	10, 135, 811, 978, 1016, 1708, 1834, 3291
BtsI	GCAGTG	3 cut(s)	1704, 2439, 3223
BtsIMutI	CAGTG	8 cut(s)	464, 1033, 1704, 2008, 2439, 2487, 3223, 3621
BtuMI	TCGCGA	1 cut(s)	906
Cac8I	GCNNGC	6 cut(s)	55, 1374, 1496, 1641, 2175, 3482
CaiI	CAGNNNCTG	1 cut(s)	1880
CciI	TCATGA	1 cut(s)	1729
CfoI	GCGC	1 cut(s)	1906
Cfr10I	RCCGGY	1 cut(s)	3304
Cfr13I	GGNCC	5 cut(s)	315, 1340, 1931, 2271, 3670
CseI	GACGC	2 cut(s)	608, 2911
CsiI	ACCWGGT	1 cut(s)	712
Csp6I	GTAC	4 cut(s)	231, 680, 2466, 3355
CspAI	ACCGGT	1 cut(s)	3304
CviQI	GTAC	4 cut(s)	231, 680, 2466, 3355
EaeI	YGGCCR	1 cut(s)	3035
Eam1104I	CTCTTC	7 cut(s)	212, 867, 997, 2031, 2363, 2741, 3493
EarI	CTCTTC	7 cut(s)	212, 867, 997, 2031, 2363, 2741, 3493
Ecl136II	GAGCTC	1 cut(s)	222
Eco130I	CCWWGG	6 cut(s)	258, 1451, 2094, 2757, 2838, 3493
Eco147I	AGGCCT	1 cut(s)	3351
Eco24I	GRGCYC	1 cut(s)	224
Eco31I	GGTCTC	1 cut(s)	1144
Eco32I	GATATC	1 cut(s)	1669
Eco47I	GGWCC	5 cut(s)	315, 1340, 1931, 2271, 3670
Eco53kI	GAGCTC	1 cut(s)	222
Eco57I	CTGAAG	5 cut(s)	174, 414, 554, 978, 2135
Eco81I	CCTNAGG	1 cut(s)	311
Eco88I	CYCGRG	2 cut(s)	128, 1644
EcoICRI	GAGCTC	1 cut(s)	222
EcoNI	CCTNNNNNAGG	1 cut(s)	2581
EcoO109I	RGGNCCY	2 cut(s)	1931, 2271
EcoRI	GAATTC	2 cut(s)	1216, 3522
EcoRII	CCWGG	2 cut(s)	712, 2854
EcoRV	GATATC	1 cut(s)	1669
EcoT14I	CCWWGG	6 cut(s)	258, 1451, 2094, 2757, 2838, 3493
EcoT22I	ATGCAT	2 cut(s)	196, 1016
EcoT38I	GRGCYC	1 cut(s)	224
ErhI	CCWWGG	6 cut(s)	258, 1451, 2094, 2757, 2838, 3493
FaqI	GGGAC	5 cut(s)	187, 737, 1480, 1614, 2880
FauNDI	CATATG	1 cut(s)	2881
FbaI	TGATCA	1 cut(s)	1567
FblI	GTMKAC	2 cut(s)	597, 2212
Fnu4HI	GCNGC	9 cut(s)	530, 659, 1716, 2021, 2547, 2814, 3023, 3415, 3769
FokI	GGATG	8 cut(s)	17, 122, 818, 985, 1023, 1715, 1841, 3278
FriOI	GRGCYC	1 cut(s)	224
Fsp4HI	GCNGC	9 cut(s)	530, 659, 1716, 2021, 2547, 2814, 3023, 3415, 3769
FspAI	RTGCGCAY	1 cut(s)	1905
FspI	TGCGCA	1 cut(s)	1905
GlaI	GCGC	1 cut(s)	1905
GluI	GCNGC	9 cut(s)	530, 659, 1716, 2021, 2547, 2814, 3023, 3415, 3769
GsuI	CTGGAG	3 cut(s)	2838, 2973, 2982
HaeIII	GGCC	4 cut(s)	1526, 3022, 3037, 3351
HapII	CCGG	2 cut(s)	3305, 3471
HgaI	GACGC	2 cut(s)	608, 2911
HhaI	GCGC	1 cut(s)	1906
Hin6I	GCGC	1 cut(s)	1904
HinP1I	GCGC	1 cut(s)	1904
HincII	GTYRAC	2 cut(s)	1807, 2719
HindII	GTYRAC	2 cut(s)	1807, 2719
HindIII	AAGCTT	4 cut(s)	536, 1533, 1892, 3743
HpaII	CCGG	2 cut(s)	3305, 3471
HphI	GGTGA	5 cut(s)	969, 1586, 1786, 2056, 2063
Hpy166II	GTNNAC	8 cut(s)	271, 361, 598, 1340, 1807, 2009, 2213, 2719
Hpy8I	GTNNAC	8 cut(s)	271, 361, 598, 1340, 1807, 2009, 2213, 2719
Hpy99I	CGWCG	1 cut(s)	2905
HpyCH4IV	ACGT	1 cut(s)	1250
HpySE526I	ACGT	1 cut(s)	1250
HspAI	GCGC	1 cut(s)	1904
Ksp22I	TGATCA	1 cut(s)	1567
LguI	GCTCTTC	2 cut(s)	212, 2363
LmnI	GCTCC	7 cut(s)	645, 1036, 1318, 2353, 2587, 2623, 3097
Lsp1109I	GCAGC	8 cut(s)	541, 670, 1702, 2032, 2533, 2825, 3426, 3755
MabI	ACCWGGT	1 cut(s)	712
MaeII	ACGT	1 cut(s)	1250
MfeI	CAATTG	1 cut(s)	3003
MflI	RGATCY	4 cut(s)	107, 831, 2422, 3340
MhlI	GDGCHC	4 cut(s)	224, 709, 1033, 2011
MlsI	TGGCCA	1 cut(s)	3037
MluNI	TGGCCA	1 cut(s)	3037
MlyI	GAGTC	8 cut(s)	209, 464, 1771, 1870, 2360, 2862, 2911, 3428
MmeI	TCCRAC	2 cut(s)	2359, 3665
Mox20I	TGGCCA	1 cut(s)	3037
Mph1103I	ATGCAT	2 cut(s)	196, 1016
MroXI	GAANNNNTTC	2 cut(s)	2787, 3306
MscI	TGGCCA	1 cut(s)	3037
MseI	TTAA	9 cut(s)	99, 836, 855, 1605, 2063, 2412, 2894, 3399, 3510
MslI	CAYNNNNRTG	5 cut(s)	407, 491, 1734, 1911, 3665
Msp20I	TGGCCA	1 cut(s)	3037
MspA1I	CMGCKG	5 cut(s)	532, 1257, 1715, 2639, 3484
MspCI	CTTAAG	3 cut(s)	98, 3398, 3509
MspI	CCGG	2 cut(s)	3305, 3471
MspR9I	CCNGG	3 cut(s)	714, 2856, 3472
MunI	CAATTG	1 cut(s)	3003
Mva1269I	GAATGC	4 cut(s)	305, 1906, 3324, 3614
MvaI	CCWGG	2 cut(s)	714, 2856
MvnI	CGCG	1 cut(s)	906
NciI	CCSGG	1 cut(s)	3472
NcoI	CCATGG	1 cut(s)	258
NdeI	CATATG	1 cut(s)	2881
NheI	GCTAGC	2 cut(s)	1639, 2173
NlaIV	GGNNCC	4 cut(s)	109, 1089, 2349, 3342
NmeAIII	GCCGAG	1 cut(s)	3051
NmuCI	GTSAC	7 cut(s)	374, 637, 975, 1774, 2503, 2659, 2797
NruI	TCGCGA	1 cut(s)	906
NsbI	TGCGCA	1 cut(s)	1905
NsiI	ATGCAT	2 cut(s)	196, 1016
NspI	RCATGY	2 cut(s)	1376, 3120
NspV	TTCGAA	1 cut(s)	3328
PaeI	GCATGC	1 cut(s)	1376
PaeR7I	CTCGAG	2 cut(s)	128, 1644
PagI	TCATGA	1 cut(s)	1729
PceI	AGGCCT	1 cut(s)	3351
PciSI	GCTCTTC	2 cut(s)	212, 2363
PcsI	WCGNNNNNNNCGW	1 cut(s)	3096
PctI	GAATGC	4 cut(s)	305, 1906, 3324, 3614
PdmI	GAANNNNTTC	2 cut(s)	2787, 3306
PfeI	GAWTC	6 cut(s)	440, 1261, 1447, 1633, 3111, 3557
PflFI	GACNNNGTC	1 cut(s)	1736
PflMI	CCANNNNNTGG	1 cut(s)	3218
PinAI	ACCGGT	1 cut(s)	3304
PkrI	GCNGC	9 cut(s)	531, 660, 1717, 2022, 2548, 2815, 3024, 3416, 3770
PleI	GAGTC	8 cut(s)	208, 464, 1771, 1869, 2360, 2862, 2911, 3428
PpsI	GAGTC	8 cut(s)	208, 464, 1771, 1869, 2360, 2862, 2911, 3428
PpuMI	RGGWCCY	2 cut(s)	1931, 2271
Psp124BI	GAGCTC	1 cut(s)	224
Psp5II	RGGWCCY	2 cut(s)	1931, 2271
Psp6I	CCWGG	2 cut(s)	712, 2854
PspGI	CCWGG	2 cut(s)	712, 2854
PspN4I	GGNNCC	4 cut(s)	109, 1089, 2349, 3342
PspPI	GGNCC	5 cut(s)	315, 1340, 1931, 2271, 3670
PspPPI	RGGWCCY	2 cut(s)	1931, 2271
PspXI	VCTCGAGB	2 cut(s)	128, 1644
PstNI	CAGNNNCTG	1 cut(s)	1880
PsuI	RGATCY	4 cut(s)	107, 831, 2422, 3340
PsyI	GACNNNGTC	1 cut(s)	1736
PvuII	CAGCTG	5 cut(s)	532, 1257, 1715, 2639, 3484
RruI	TCGCGA	1 cut(s)	906
RsaI	GTAC	4 cut(s)	232, 681, 2467, 3356
RsaNI	GTAC	4 cut(s)	231, 680, 2466, 3355
RseI	CAYNNNNRTG	5 cut(s)	407, 491, 1734, 1911, 3665
SacI	GAGCTC	1 cut(s)	224
SapI	GCTCTTC	2 cut(s)	212, 2363
SaqAI	TTAA	9 cut(s)	99, 836, 855, 1605, 2063, 2412, 2894, 3399, 3510
SatI	GCNGC	9 cut(s)	530, 659, 1716, 2021, 2547, 2814, 3023, 3415, 3769
Sau96I	GGNCC	5 cut(s)	315, 1340, 1931, 2271, 3670
SchI	GAGTC	8 cut(s)	209, 464, 1771, 1870, 2360, 2862, 2911, 3428
ScrFI	CCNGG	3 cut(s)	714, 2856, 3472
SduI	GDGCHC	4 cut(s)	224, 709, 1033, 2011
SexAI	ACCWGGT	1 cut(s)	712
SfcI	CTRYAG	1 cut(s)	2013
Sfr274I	CTCGAG	2 cut(s)	128, 1644
SfuI	TTCGAA	1 cut(s)	3328
SinI	GGWCC	5 cut(s)	315, 1340, 1931, 2271, 3670
SlaI	CTCGAG	2 cut(s)	128, 1644
SmiMI	CAYNNNNRTG	5 cut(s)	407, 491, 1734, 1911, 3665
SmlI	CTYRAG	9 cut(s)	98, 128, 223, 472, 1644, 3104, 3297, 3398, 3509
SmoI	CTYRAG	9 cut(s)	98, 128, 223, 472, 1644, 3104, 3297, 3398, 3509
SphI	GCATGC	1 cut(s)	1376
SseBI	AGGCCT	1 cut(s)	3351
SsiI	CCGC	1 cut(s)	3023
SstI	GAGCTC	1 cut(s)	224
StuI	AGGCCT	1 cut(s)	3351
StyD4I	CCNGG	3 cut(s)	712, 2854, 3470
StyI	CCWWGG	6 cut(s)	258, 1451, 2094, 2757, 2838, 3493
TaiI	ACGT	1 cut(s)	1253
TaqII	GACCGA	1 cut(s)	728
TatI	WGTACW	3 cut(s)	230, 679, 3354
TauI	GCSGC	1 cut(s)	3025
TfiI	GAWTC	6 cut(s)	440, 1261, 1447, 1633, 3111, 3557
Tru1I	TTAA	9 cut(s)	99, 836, 855, 1605, 2063, 2412, 2894, 3399, 3510
Tru9I	TTAA	9 cut(s)	99, 836, 855, 1605, 2063, 2412, 2894, 3399, 3510
TscAI	CASTG	8 cut(s)	464, 1033, 1704, 2008, 2446, 2487, 3223, 3621
TseFI	GTSAC	7 cut(s)	374, 637, 975, 1774, 2503, 2659, 2797
TseI	GCWGC	8 cut(s)	529, 658, 1715, 2020, 2546, 2813, 3414, 3768
Tsp45I	GTSAC	7 cut(s)	374, 637, 975, 1774, 2503, 2659, 2797
TspGWI	ACGGA	1 cut(s)	1645
TspRI	CASTG	8 cut(s)	464, 1033, 1704, 2008, 2446, 2487, 3223, 3621
Tth111I	GACNNNGTC	1 cut(s)	1736
Van91I	CCANNNNNTGG	1 cut(s)	3218
Vha464I	CTTAAG	3 cut(s)	98, 3398, 3509
VneI	GTGCAC	1 cut(s)	2007
VpaK11BI	GGWCC	5 cut(s)	315, 1340, 1931, 2271, 3670
XagI	CCTNNNNNAGG	1 cut(s)	2581
XapI	RAATTY	9 cut(s)	878, 1216, 1300, 1790, 1955, 2190, 2385, 3522, 3599
XbaI	TCTAGA	2 cut(s)	2306, 3532
XceI	RCATGY	2 cut(s)	1376, 3120
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2755
XhoI	CTCGAG	2 cut(s)	128, 1644
XmiI	GTMKAC	2 cut(s)	597, 2212
XmnI	GAANNNNTTC	2 cut(s)	2787, 3306
Zsp2I	ATGCAT	2 cut(s)	196, 1016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.