Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001001

Physical Location & Seq

Genomic Coordinates Forward (+)

19803420 .. 19807396

Gene Structure 3977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1175800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2721 bp

ATGGGGGAACCTGTAAGAATGATACCAGAGGCTCTTTCAATGATGATCCAAGTCAAGGTTTCATTTGACAGGCTCAATGTGTTTTTGCTTGATGACGAGCTGAAAGATGACGAAGTAAGGAAGTTGCCCTCACAAAATTCCCATAAGAGCTTAAGAATAGAAAGGTGTAATTTCAGCTGGTATCCTGATCAATCAACCGATCCAACTCTCAGAGATGTGAATTTAGAAGTGCAACGGGAGCAGAAAGTTGCAGTTTGTGGACCAGTTAGAGCCGGAAAATCATCACTACTATATGCTATACTTGGAGAAATGCCGAAAATTTCAGGAACTGTTGATGTATTTGGAACCATAGCCTATGTTTCTCAGACTGCTTGGATACAAAGTGGGACAGTTCGTGATAACATACTCTACGGCAGGCCAATGGACAAGAACAAATATGAGAATGCCATAAAAGCTTGTGCTTTGGATAAGGACATTGATAGTTTTGACCATGGTGATCTTACTGAAATAGGAGAGAGGGGGCTTAACGTGAGTGGGGGACAAAAGCAGCGGATTCAACTGGCCCGAGCTGTCTATAGTGACACTGATATCTATCTTCTTGATGATCCCTTTAGTGCAGTGGATGCCCATACTGGTGCAACTCTATTTCATGAATGCATCATGGCTACTCTAGCAAAGAAAATTGTGATTCTGGTGACTCATCAAGTTGAATTCCTCTCAAAAGTTGATAAAATTATAGTAATGGAGGTTGGACATGTCACTCAATCAGGAAGCTATGAGAGTCCTTTGACAGCAGGAACAGCATTTGAGCAGCTTGTACATGCTCATAGAGATACGGTAACAACATTGGGTCGTTCCAATAATCAAAGTCAAGGAGAATCTGAAAAGGGAGATATAGTTCGGCCGGAGGAACTTCAGGCGGGTTACCTCACTACAATTAACAGTGAAGGGGATATTTCAGTGAAGGGTGTGCCTGGCGTGCAACTAACAGAAGAAGAAGAGAAAGGGATTGGTGATGTTGGACTGAAACCCATTCGGGATTATTTTCTTGTGTCTAAAGGAACACTTCTTCTAATCTTAGGCATAATGGCACAATCTGGTTTTATCGGATTTCAGGCTGTTTCAACTTATTGGCTAGCTCTAGGCATTCAAATGCCTAACATAACCAATGGCATGCTCATCGGCGTTTATACAGCTATTTCAACATTTAGTGCTGTGTTTGTATATCTAAGGTCATTTTCAACAGCCCATATGGGATTGAAAGCTTCCAAAGCCTTTATCTCTGGTTTCAACAATGCTATATTTAAGGCTCCCATGCTCTTCTTTGACTCAACCCCTGCTGGCCGGATTTTGATACGAGCCTCATCTGATTTAAGTATTTTGGATTTTGATGTACCTTTCTCCATGATCTTCATTGTGTCTGCTGGCATTGAACTGCTAACAACGATTGGAATTATGGCTTCTGTCACATGGCAAGTTCTCATTGTAGGCATTCTCGCCATGGTTGCCGCAAATTATGTTCAGGGGTATTACCTAGCCACTGCAAGGGAACTAATAAGAATCAATGGAACAACTAAAGCTCCGGTTATGAACTATGCATCGGAGACATCACTTGGAGTGGTTACCATAAGAGCTTTTAAAATGGCTGACAGATTCTTCCACAACTACTTGAAGCTAGTTGACACAGATGCTCGACTGTTATTTCATTCTAACGCAACCATGGAGTGGTTAATTTTAAGGACAGAAGCACTTCAGAATTTGACCCTTTTCATGGCTGCTTTCTTACTTATCTTACTCCCCAAGGGTTATGTTGCTCCAGGGCTTATAGGGCTTTTGCTGTCATATGCTTTATCAATAACGGGGACACAGATTTTTGGGACTCGATGGTATTGCAACTTATCCAACTACATTATCTCAGTTGAAAGGATAAAACAATTCATGATGATTCCGCCAGAGCCTCCAGCAATTGTGGAGGATAAGAGGCCACCATATTCATGGCCTAACAAGGGTAGGATAGAGCTCTATTCTCTGAAGATAAAATATCGTTCAAATGCTCCGCTAGTTCTAAGGGGAATTACATGCACATTCAAAGAAGGCACTAGAGTAGGAGTTGTGGGAAGGACAGGAAGCGGAAAAACTACACTCATAAGTGCTTTGTTCCACTTAGTAGAGCCGACCAGTGGTAAAATTCTTATAGATGGACTTGACATCTGTTCAACGGGTCTAAAAGATTTGAGAATGAAGCTCAGCATCATCCCTCAAGAGCCAACTCTTTTCAGAGGTAGCATCCGAACCAACTTGGATCCTCTAGGCCTTTACTCTGATTATGTGATATGGAGGGCGACAGTCAGCAACCTACCTAATCTACTCGACTCCTCTGTGAGTGATGAAGGGGAAAATTGGAGTGTCGGGCAACGCCAGCTCTTTTGCCTTGGAAGAGTCCTTCTCAAGAGGAACAGAATTTTAGTTCTCGATGAGGCTACTGCCTCCATTGATTCTTCAACAGATGCCATTCTGCAGAGAATCATAAGGCAGGAATTTGCAGAATGCACGGTTATAACCGTAGCTCACAGAGTTCCAACTGTTATAGACAGTGACATGGTCATGGTCCTCTCCTATGGGAAGCTGGTGGAGTATGAACAACCTTCAAAGCTGTTGGATACCAACTCCTACTTCTCCAAACTTGTTGCTGAATATTGGTCAAGCTGCAAGAAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

907

Amino Acids

100.37

Weight (kDa)

6.41

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	70 - 204	1.7e-17	ABC transporter
ABC_membrane	PF00664	358 - 621	1.9e-22	ABC transporter transmembrane region
ABC_tran	PF00005	689 - 829	3.9e-25	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21250 AT3G21250 AT3G21250 AT3G21250 AT3G21250 AT3G21250
fragaria_vesca	FvH4_6g33070 FvH4_6g33070 FvH4_6g33070 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260 FvH4_6g37260
malus_domestica	MD09G1195100.v1.1 MD14G1118300.v1.1 MD17G1175700.v1.1 MD17G1175800.v1.1
prunus_persica	Prupe.3G051600_v2.0.a1 Prupe.3G051800_v2.0.a1 Prupe.3G051800_v2.0.a1
pyrus_communis	pycom09g11210
rosa_chinensis	RchiOBHm_Chr2g0142721 RchiOBHm_Chr2g0142761 RchiOBHm_Chr2g0142771 RchiOBHm_Chr2g0150061
rosa_laevigata	RLG00000019980 RLG00000019982 RLG00000019984
rosa_multiflora	Rmu_co8521907.1_g000001 Rmu_sc0004112.1_g000013 Rmu_sc0004610.1_g000003
rosa_roxburghii	Rroxscaffold_2G00097480 Rroxscaffold_2G00102330 Rroxscaffold_2G00102350 Rroxscaffold_2G00102380 Rroxscaffold_2G00103380
rosa_rugosa	Rorug02G0374800 Rorug02G0374900 Rorug02G0375000 Rorug02G0375100 Rorug02G0418200
rosa_samantha	Rh1DG425700 Rh2AG427200 Rh2AG427900 Rh2AG428000 Rh2AG477500 Rh2BG437100 Rh2BG437400 Rh2BG437600 Rh2CG463300 Rh2DG446800 Rh2DG447100 Rh2DG447200 Rh2DG447300 Rh2DG447400 Rh2DG498700 Rh7DG155300
rosa_wichuraiana	Rw2G035000 Rw2G035010 Rw2G035020 Rw2G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2558
AccB7I	CCANNNNNTGG	1 cut(s)	1725
AciI	CCGC	6 cut(s)	550, 920, 1509, 1949, 2057, 2130
AclWI	GGATC	5 cut(s)	40, 194, 599, 2297, 2310
AcoI	YGGCCR	2 cut(s)	902, 1342
AcsI	RAATTY	8 cut(s)	136, 220, 318, 710, 1756, 2187, 2460, 2537
AcuI	CTGAAG	3 cut(s)	899, 1736, 2051
AfaI	GTAC	2 cut(s)	819, 1395
AfiI	CCNNNNNNNGG	6 cut(s)	55, 1545, 1725, 1771, 2006, 2180
AflII	CTTAAG	1 cut(s)	151
AflIII	ACRYGT	1 cut(s)	754
AjnI	CCWGG	2 cut(s)	973, 1816
AjuI	GAANNNNNNNTTGG	2 cut(s)	2657, 2689
AloI	GAACNNNNNNTCC	2 cut(s)	882, 914
Alw21I	GWGCWC	1 cut(s)	2022
Alw26I	GTCTC	1 cut(s)	1598
AlwI	GGATC	5 cut(s)	40, 194, 599, 2297, 2310
AlwNI	CAGNNNCTG	1 cut(s)	329
Ama87I	CYCGRG	1 cut(s)	564
AoxI	GGCC	7 cut(s)	416, 561, 902, 1342, 1982, 1997, 2311
ApeKI	GCWGC	4 cut(s)	547, 811, 1775, 2706
ApoI	RAATTY	8 cut(s)	136, 220, 318, 710, 1756, 2187, 2460, 2537
Asp700I	GAANNNNTTC	1 cut(s)	1749
AspS9I	GGNCC	3 cut(s)	260, 562, 2608
AsuHPI	GGTGA	3 cut(s)	506, 706, 1025
AsuNHI	GCTAGC	1 cut(s)	1135
AvaI	CYCGRG	1 cut(s)	564
AvaII	GGWCC	2 cut(s)	260, 2608
BamHI	GGATCC	1 cut(s)	2302
BanII	GRGCYC	1 cut(s)	2022
Bbv12I	GWGCWC	1 cut(s)	2022
BbvI	GCAGC	4 cut(s)	559, 823, 1762, 2693
BccI	CCATC	2 cut(s)	1878, 2192
BceAI	ACGGC	1 cut(s)	427
BcgI	CGANNNNNNTGC	4 cut(s)	1162, 1196, 1872, 1906
BciT130I	CCWGG	2 cut(s)	975, 1818
BciVI	GTATCC	3 cut(s)	192, 369, 2653
BclI	TGATCA	1 cut(s)	187
BcoDI	GTCTC	1 cut(s)	1598
BfaI	CTAG	8 cut(s)	671, 1136, 1142, 1535, 1676, 2060, 2100, 2309
BfmI	CTRYAG	2 cut(s)	574, 2516
BfrI	CTTAAG	1 cut(s)	151
BfuI	GTATCC	3 cut(s)	192, 369, 2653
BisI	GCNGC	5 cut(s)	548, 812, 1509, 1776, 2707
BlpI	GCTNAGC	1 cut(s)	2246
BlsI	GCNGC	5 cut(s)	549, 813, 1510, 1777, 2708
Bme1390I	CCNGG	2 cut(s)	975, 1818
Bme18I	GGWCC	2 cut(s)	260, 2608
BmeT110I	CYCGRG	1 cut(s)	564
BmgT120I	GGNCC	3 cut(s)	260, 562, 2608
BmiI	GGNNCC	4 cut(s)	9, 346, 1311, 2304
BmrFI	CCNGG	2 cut(s)	975, 1818
BmsI	GCATC	7 cut(s)	613, 666, 1607, 1678, 2259, 2295, 2497
BmtI	GCTAGC	1 cut(s)	1139
BplI	GAGNNNNNCTC	2 cut(s)	2430, 2462
BpmI	CTGGAG	2 cut(s)	1800, 1944
Bpu1102I	GCTNAGC	1 cut(s)	2246
BpuEI	CTTGAG	2 cut(s)	2244, 2432
BsaBI	GATNNNNATC	1 cut(s)	591
BsaJI	CCNNGG	6 cut(s)	490, 1500, 1719, 1800, 1817, 2431
BsaWI	WCCGGW	1 cut(s)	1582
BsaXI	ACNNNNNCTCC	4 cut(s)	882, 912, 1564, 1594
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 1545, 1725, 1771, 2006, 2180
Bse1I	ACTGG	4 cut(s)	263, 564, 637, 2178
Bse8I	GATNNNNATC	1 cut(s)	591
BseBI	CCWGG	2 cut(s)	975, 1818
BseDI	CCNNGG	6 cut(s)	490, 1500, 1719, 1800, 1817, 2431
BseGI	GGATG	3 cut(s)	628, 2253, 2286
BseJI	GATNNNNATC	1 cut(s)	591
BseLI	CCNNNNNNNGG	6 cut(s)	55, 1545, 1725, 1771, 2006, 2180
BseMII	CTCAG	4 cut(s)	223, 377, 1929, 2260
BseNI	ACTGG	4 cut(s)	263, 564, 637, 2178
BseRI	GAGGAG	1 cut(s)	2365
BseX3I	CGGCCG	1 cut(s)	902
BseXI	GCAGC	4 cut(s)	559, 823, 1762, 2693
BsgI	GTGCAG	1 cut(s)	636
Bsh1285I	CGRYCG	1 cut(s)	905
BshFI	GGCC	7 cut(s)	418, 563, 904, 1344, 1984, 1999, 2313
BsiEI	CGRYCG	1 cut(s)	905
BsiHKAI	GWGCWC	1 cut(s)	2022
BsiHKCI	CYCGRG	1 cut(s)	564
BsiSI	CCGG	4 cut(s)	273, 905, 1345, 1583
BslFI	GGGAC	4 cut(s)	400, 552, 1876, 1891
BslI	CCNNNNNNNGG	6 cut(s)	55, 1545, 1725, 1771, 2006, 2180
BsmAI	GTCTC	1 cut(s)	1598
BsmFI	GGGAC	4 cut(s)	400, 552, 1876, 1891
BsmI	GAATGC	5 cut(s)	448, 659, 1146, 1491, 2552
BsnI	GGCC	7 cut(s)	418, 563, 904, 1344, 1984, 1999, 2313
BsoBI	CYCGRG	1 cut(s)	564
Bsp1286I	GDGCHC	1 cut(s)	2022
Bsp1407I	TGTACA	1 cut(s)	817
Bsp143I	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
Bsp1720I	GCTNAGC	1 cut(s)	2246
Bsp19I	CCATGG	3 cut(s)	490, 1500, 1719
BspACI	CCGC	6 cut(s)	550, 920, 1509, 1949, 2057, 2130
BspANI	GGCC	7 cut(s)	418, 563, 904, 1344, 1984, 1999, 2313
BspCNI	CTCAG	4 cut(s)	222, 376, 1928, 2259
BspHI	TCATGA	2 cut(s)	649, 1938
BspLI	GGNNCC	4 cut(s)	9, 346, 1311, 2304
BspMAI	CTGCAG	1 cut(s)	2520
BspOI	GCTAGC	1 cut(s)	1139
BspPI	GGATC	5 cut(s)	40, 194, 599, 2297, 2310
BspQI	GCTCTTC	1 cut(s)	1325
BspTI	CTTAAG	1 cut(s)	151
BsrGI	TGTACA	1 cut(s)	817
BsrI	ACTGG	4 cut(s)	263, 564, 637, 2178
BssECI	CCNNGG	6 cut(s)	490, 1500, 1719, 1800, 1817, 2431
BssMI	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
BssT1I	CCWWGG	5 cut(s)	490, 1500, 1719, 1800, 2431
Bst2UI	CCWGG	2 cut(s)	975, 1818
Bst6I	CTCTTC	3 cut(s)	993, 1325, 2431
BstAFI	CTTAAG	1 cut(s)	151
BstAPI	GCANNNNNTGC	1 cut(s)	623
BstAUI	TGTACA	1 cut(s)	817
BstC8I	GCNNGC	7 cut(s)	416, 980, 1137, 1175, 1342, 1426, 2420
BstDEI	CTNAG	8 cut(s)	209, 363, 1078, 1229, 1915, 2066, 2164, 2246
BstDSI	CCRYGG	3 cut(s)	490, 1500, 1719
BstEII	GGTNACC	2 cut(s)	923, 1621
BstF5I	GGATG	3 cut(s)	628, 2253, 2286
BstKTI	GATC	7 cut(s)	48, 190, 202, 499, 607, 1410, 2305
BstMAI	GTCTC	1 cut(s)	1598
BstMBI	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
BstMCI	CGRYCG	1 cut(s)	905
BstNI	CCWGG	2 cut(s)	975, 1818
BstNSI	RCATGY	4 cut(s)	758, 824, 1177, 2082
BstPI	GGTNACC	2 cut(s)	923, 1621
BstSCI	CCNGG	2 cut(s)	973, 1816
BstSFI	CTRYAG	2 cut(s)	574, 2516
BstV1I	GCAGC	4 cut(s)	559, 823, 1762, 2693
BstX2I	RGATCY	1 cut(s)	2302
BstXI	CCANNNNNNTGG	1 cut(s)	1995
BstYI	RGATCY	1 cut(s)	2302
BstZI	CGGCCG	1 cut(s)	902
BsuI	GTATCC	3 cut(s)	192, 369, 2653
BsuRI	GGCC	7 cut(s)	418, 563, 904, 1344, 1984, 1999, 2313
BtgI	CCRYGG	3 cut(s)	490, 1500, 1719
BtsCI	GGATG	3 cut(s)	628, 2253, 2286
BtsI	GCAGTG	2 cut(s)	624, 1539
BtsIMutI	CAGTG	7 cut(s)	582, 624, 949, 966, 1539, 2185, 2599
Cac8I	GCNNGC	7 cut(s)	416, 980, 1137, 1175, 1342, 1426, 2420
CaiI	CAGNNNCTG	1 cut(s)	329
CciI	TCATGA	2 cut(s)	649, 1938
Cfr13I	GGNCC	3 cut(s)	260, 562, 2608
Csp6I	GTAC	2 cut(s)	818, 1394
CviQI	GTAC	2 cut(s)	818, 1394
DdeI	CTNAG	8 cut(s)	209, 363, 1078, 1229, 1915, 2066, 2164, 2246
DpnI	GATC	7 cut(s)	47, 189, 201, 498, 606, 1409, 2304
DpnII	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
DraI	TTTAAA	1 cut(s)	1639
EaeI	YGGCCR	2 cut(s)	902, 1342
EagI	CGGCCG	1 cut(s)	902
Eam1104I	CTCTTC	3 cut(s)	993, 1325, 2431
EarI	CTCTTC	3 cut(s)	993, 1325, 2431
EciI	GGCGGA	1 cut(s)	1938
Ecl136II	GAGCTC	1 cut(s)	2020
EclXI	CGGCCG	1 cut(s)	902
Eco130I	CCWWGG	5 cut(s)	490, 1500, 1719, 1800, 2431
Eco147I	AGGCCT	1 cut(s)	2313
Eco24I	GRGCYC	1 cut(s)	2022
Eco32I	GATATC	1 cut(s)	589
Eco47I	GGWCC	2 cut(s)	260, 2608
Eco52I	CGGCCG	1 cut(s)	902
Eco53kI	GAGCTC	1 cut(s)	2020
Eco57I	CTGAAG	3 cut(s)	899, 1736, 2051
Eco88I	CYCGRG	1 cut(s)	564
Eco91I	GGTNACC	2 cut(s)	923, 1621
EcoICRI	GAGCTC	1 cut(s)	2020
EcoO65I	GGTNACC	2 cut(s)	923, 1621
EcoRI	GAATTC	1 cut(s)	710
EcoRII	CCWGG	2 cut(s)	973, 1816
EcoRV	GATATC	1 cut(s)	589
EcoT14I	CCWWGG	5 cut(s)	490, 1500, 1719, 1800, 2431
EcoT22I	ATGCAT	2 cut(s)	659, 1600
EcoT38I	GRGCYC	1 cut(s)	2022
ErhI	CCWWGG	5 cut(s)	490, 1500, 1719, 1800, 2431
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	4 cut(s)	400, 552, 1876, 1891
FauI	CCCGC	1 cut(s)	913
FauNDI	CATATG	2 cut(s)	1251, 1843
FbaI	TGATCA	1 cut(s)	187
Fnu4HI	GCNGC	5 cut(s)	548, 812, 1509, 1776, 2707
FokI	GGATG	3 cut(s)	635, 2240, 2273
FriOI	GRGCYC	1 cut(s)	2022
Fsp4HI	GCNGC	5 cut(s)	548, 812, 1509, 1776, 2707
FspBI	CTAG	8 cut(s)	671, 1136, 1142, 1535, 1676, 2060, 2100, 2309
GluI	GCNGC	5 cut(s)	548, 812, 1509, 1776, 2707
GsuI	CTGGAG	2 cut(s)	1800, 1944
HaeIII	GGCC	7 cut(s)	418, 563, 904, 1344, 1984, 1999, 2313
HapII	CCGG	4 cut(s)	273, 905, 1345, 1583
HincII	GTYRAC	1 cut(s)	1681
HindII	GTYRAC	1 cut(s)	1681
HindIII	AAGCTT	2 cut(s)	453, 1263
HpaII	CCGG	4 cut(s)	273, 905, 1345, 1583
HphI	GGTGA	3 cut(s)	506, 706, 1025
Hpy166II	GTNNAC	2 cut(s)	260, 1681
Hpy8I	GTNNAC	2 cut(s)	260, 1681
HpyAV	CCTTC	7 cut(s)	941, 958, 2087, 2112, 2384, 2453, 2655
HpyCH4IV	ACGT	1 cut(s)	528
HpyF3I	CTNAG	8 cut(s)	209, 363, 1078, 1229, 1915, 2066, 2164, 2246
HpySE526I	ACGT	1 cut(s)	528
Ksp22I	TGATCA	1 cut(s)	187
Kzo9I	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
LguI	GCTCTTC	1 cut(s)	1325
LmnI	GCTCC	5 cut(s)	238, 1315, 1585, 1819, 2059
Lsp1109I	GCAGC	4 cut(s)	559, 823, 1762, 2693
LweI	GCATC	7 cut(s)	613, 666, 1607, 1678, 2259, 2295, 2497
MaeI	CTAG	8 cut(s)	671, 1136, 1142, 1535, 1676, 2060, 2100, 2309
MaeII	ACGT	1 cut(s)	528
MaeIII	GTNAC	8 cut(s)	578, 694, 757, 838, 923, 1465, 1621, 2594
MalI	GATC	7 cut(s)	47, 189, 201, 498, 606, 1409, 2304
MboI	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
MfeI	CAATTG	1 cut(s)	1965
MflI	RGATCY	1 cut(s)	2302
MhlI	GDGCHC	1 cut(s)	2022
MlyI	GAGTC	6 cut(s)	691, 790, 1322, 1873, 2366, 2448
MmeI	TCCRAC	6 cut(s)	227, 730, 1000, 1926, 2603, 2637
Mph1103I	ATGCAT	2 cut(s)	659, 1600
MroXI	GAANNNNTTC	1 cut(s)	1749
MseI	TTAA	8 cut(s)	152, 525, 939, 1305, 1373, 1638, 1730, 1736
MslI	CAYNNNNRTG	4 cut(s)	633, 1151, 1993, 2603
MspA1I	CMGCKG	2 cut(s)	177, 550
MspCI	CTTAAG	1 cut(s)	151
MspI	CCGG	4 cut(s)	273, 905, 1345, 1583
MspR9I	CCNGG	2 cut(s)	975, 1818
MunI	CAATTG	1 cut(s)	1965
Mva1269I	GAATGC	5 cut(s)	448, 659, 1146, 1491, 2552
MvaI	CCWGG	2 cut(s)	975, 1818
NcoI	CCATGG	3 cut(s)	490, 1500, 1719
NdeI	CATATG	2 cut(s)	1251, 1843
NdeII	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
NheI	GCTAGC	1 cut(s)	1135
NlaIV	GGNNCC	4 cut(s)	9, 346, 1311, 2304
NmuCI	GTSAC	5 cut(s)	578, 694, 757, 1465, 2594
NsiI	ATGCAT	2 cut(s)	659, 1600
NspI	RCATGY	4 cut(s)	758, 824, 1177, 2082
PaeI	GCATGC	1 cut(s)	1177
PagI	TCATGA	2 cut(s)	649, 1938
PceI	AGGCCT	1 cut(s)	2313
PciI	ACATGT	1 cut(s)	754
PciSI	GCTCTTC	1 cut(s)	1325
PctI	GAATGC	5 cut(s)	448, 659, 1146, 1491, 2552
PdmI	GAANNNNTTC	1 cut(s)	1749
PfeI	GAWTC	8 cut(s)	553, 688, 878, 1560, 1653, 1945, 2495, 2523
PflFI	GACNNNGTC	1 cut(s)	2600
PflMI	CCANNNNNTGG	1 cut(s)	1725
PkrI	GCNGC	5 cut(s)	549, 813, 1510, 1777, 2708
PleI	GAGTC	6 cut(s)	691, 789, 1322, 1873, 2366, 2447
PpsI	GAGTC	6 cut(s)	691, 789, 1322, 1873, 2366, 2447
PscI	ACATGT	1 cut(s)	754
PsiI	TTATAA	1 cut(s)	2558
Psp124BI	GAGCTC	1 cut(s)	2022
Psp6I	CCWGG	2 cut(s)	973, 1816
PspEI	GGTNACC	2 cut(s)	923, 1621
PspGI	CCWGG	2 cut(s)	973, 1816
PspN4I	GGNNCC	4 cut(s)	9, 346, 1311, 2304
PspPI	GGNCC	3 cut(s)	260, 562, 2608
PstI	CTGCAG	1 cut(s)	2520
PstNI	CAGNNNCTG	1 cut(s)	329
PsuI	RGATCY	1 cut(s)	2302
PsyI	GACNNNGTC	1 cut(s)	2600
PvuII	CAGCTG	1 cut(s)	177
RsaI	GTAC	2 cut(s)	819, 1395
RsaNI	GTAC	2 cut(s)	818, 1394
RseI	CAYNNNNRTG	4 cut(s)	633, 1151, 1993, 2603
SacI	GAGCTC	1 cut(s)	2022
SapI	GCTCTTC	1 cut(s)	1325
SaqAI	TTAA	8 cut(s)	152, 525, 939, 1305, 1373, 1638, 1730, 1736
SatI	GCNGC	5 cut(s)	548, 812, 1509, 1776, 2707
Sau3AI	GATC	7 cut(s)	45, 187, 199, 496, 604, 1407, 2302
Sau96I	GGNCC	3 cut(s)	260, 562, 2608
SchI	GAGTC	6 cut(s)	691, 790, 1322, 1873, 2366, 2448
ScrFI	CCNGG	2 cut(s)	975, 1818
SduI	GDGCHC	1 cut(s)	2022
SfaNI	GCATC	7 cut(s)	613, 666, 1607, 1678, 2259, 2295, 2497
SfcI	CTRYAG	2 cut(s)	574, 2516
SinI	GGWCC	2 cut(s)	260, 2608
SmiMI	CAYNNNNRTG	4 cut(s)	633, 1151, 1993, 2603
SmlI	CTYRAG	3 cut(s)	151, 2259, 2447
SmoI	CTYRAG	3 cut(s)	151, 2259, 2447
SphI	GCATGC	1 cut(s)	1177
SseBI	AGGCCT	1 cut(s)	2313
SsiI	CCGC	6 cut(s)	550, 920, 1509, 1949, 2057, 2130
SspI	AATATT	1 cut(s)	2696
SspMI	CTAG	8 cut(s)	671, 1136, 1142, 1535, 1676, 2060, 2100, 2309
SstI	GAGCTC	1 cut(s)	2022
StuI	AGGCCT	1 cut(s)	2313
StyD4I	CCNGG	2 cut(s)	973, 1816
StyI	CCWWGG	5 cut(s)	490, 1500, 1719, 1800, 2431
TaiI	ACGT	1 cut(s)	531
TaqI	TCGA	4 cut(s)	1693, 1882, 2370, 2472
TatI	WGTACW	1 cut(s)	817
TauI	GCSGC	1 cut(s)	1511
TfiI	GAWTC	8 cut(s)	553, 688, 878, 1560, 1653, 1945, 2495, 2523
Tru1I	TTAA	8 cut(s)	152, 525, 939, 1305, 1373, 1638, 1730, 1736
Tru9I	TTAA	8 cut(s)	152, 525, 939, 1305, 1373, 1638, 1730, 1736
TscAI	CASTG	7 cut(s)	589, 624, 949, 966, 1546, 2185, 2599
TseFI	GTSAC	5 cut(s)	578, 694, 757, 1465, 2594
TseI	GCWGC	4 cut(s)	547, 811, 1775, 2706
Tsp45I	GTSAC	5 cut(s)	578, 694, 757, 1465, 2594
TspRI	CASTG	7 cut(s)	589, 624, 949, 966, 1546, 2185, 2599
Tth111I	GACNNNGTC	1 cut(s)	2600
Van91I	CCANNNNNTGG	1 cut(s)	1725
Vha464I	CTTAAG	1 cut(s)	151
VpaK11BI	GGWCC	2 cut(s)	260, 2608
XapI	RAATTY	8 cut(s)	136, 220, 318, 710, 1756, 2187, 2460, 2537
XceI	RCATGY	4 cut(s)	758, 824, 1177, 2082
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1992
XmnI	GAANNNNTTC	1 cut(s)	1749
XspI	CTAG	8 cut(s)	671, 1136, 1142, 1535, 1676, 2060, 2100, 2309
Zsp2I	ATGCAT	2 cut(s)	659, 1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.