Rh2DG446800

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
64860339 .. 64864466
4128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG446800.1

Sequence Viewer

Length: 1599 bp
ATGGGAGACCCTGTCCGAGTTATACCAGAAGCTCTTTCTGTAATGATCCAAGTCAAGGATTGTGTCAAGGTTGCTTTAGCAAAGAAAACTGTGATTCTGGTGACTCATCAAGTTGAATTTCTCTCAGAAGTTGATAACATCTTGGTAATGGAGGGCGGAAGAATTACTCAATCCGGAAGCTATGACGGTCTCTTGACAAAAGGAACTGCATTTGAGCAGCTTGTGAATGCTCATAGAGATGCAGTAACAACATTGGACAGCCCAAACTACCAAACCCAAGAATCTGAGAAGGAAGATATGATCCAACCAGAAGAGTCTCAAAGGACTAATCTTGCCGGTGAAACTGAAGGGGATACTTCCATGGCGGGCATTCCTGGGGTTCAGCTAACAGAAGAAGAAGAGAAAGAGATTGGTGATGTTAGCTGGAAGTCCTGTTGGGATTATATTTTTGTTTCCAAGGGAACACTTCTTCTATTCTCCGGGATATTATCACAGTTTTGTTTTTCTATTTTTCTGGCTGCTTCAACTTATTGGCTAGCTCTAGGCATTAAGATTCCTAATATAACCAGTGCTACACTGATTGGAGTTTACACTGCAATTTCTTCACTCTGTGCTGTCTCTGTATTTCTAAGATCATATTCTGCAGCCCATATGGGATTAAAAGCTTCTAGAGCCTTTTTTGAAGGTTTCACCGATGCTATATTTAAAGCTCCCATGTTGTTCTTTGACTCAACCCCTGTTGGGAGGATTTTAACACGAGCTTCATCAGATTTAAGTACTCTAGATTTTGAGATACCCTTCTCCATTATGTTTACTGTTTCGGCTGTTATTCAACTGCTGACAACTATTGCAGTTCTGGCTTCCGTGATATGGGAAGTTCTCATTGTAGCTATTCTCGCAACTGTTGCTGTACAATACGTTCAGAGATATTGTCAAGCCTCTGCAAGGGAACTAACAAGAATCAATGGAACAACCAAAGCTCCTGTTATGAATTACGCAGCTGAAACATCACATGGAGTGGTCACTATAAGGGCTTTTAAAATGGTCAACAGGTTCTTCGACGACTACCTAAAGCTAGTTGACACTGATGCCAGACTGTTCTTTCATTCTAATGCAACCAGGGAGTGGTTAATATTAAGGACAGAAGCACTTCAGAATTTGACCCTTTACGCCACTGGTTTTCTCCTTGTTTTACTTCCTAAGGGATACATTTCTTCAGGTCTTGTGGGGCTCTCTCTTTCTTACGCCTTAACACTCACAACAACACAAATTTATCTGACTCAATGGTATTGCAACTTAGCAAACAACATAATATCAGTTGAAAGGATAAAACAATTCATGCAGATTTCACCAGAGCCTCCTGCAATTTTGGAGGACAAGAGGCCACCATTTTCATGGCCTCAAAAGGGTAGAATAGAGCTGCATTGTCTGGAGGCTTTAGAAAAGTGTCAGCTCAAGGCAACAGTCAGCAGCCTGCCTAATCTGCTAGGCTCATCTGGGAAGCTGGTGGAGTATGAAGAACCTTCAAAGCTATTGGATACCAACTCCTACTTCTCCAAGCTTGTAGCTGAATATTGGTCCAGTAGCAAGACAAACTGA

Protein Analysis

532

Amino Acids

58.97

Weight (kDa)

5.32

Isoelectric Point (pI)

33.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 157 - 421 3.4e-24 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1125
AccIII TCCGGA 1 cut(s) 173
AciI CCGC 2 cut(s) 156, 365
AclWI GGATC 2 cut(s) 40, 295
AcsI RAATTY 3 cut(s) 116, 1156, 1269
AcuI CTGAAG 3 cut(s) 366, 1136, 1200
AdeI CACNNNGTG 1 cut(s) 611
AfaI GTAC 2 cut(s) 778, 912
AfiI CCNNNNNNNGG 6 cut(s) 55, 741, 870, 945, 1125, 1406
AgsI TTSAA 6 cut(s) 116, 525, 683, 833, 1322, 1527
AjnI CCWGG 2 cut(s) 373, 1118
AjuI GAANNNNNNNTTGG 2 cut(s) 1535, 1567
Alw26I GTCTC 3 cut(s) 194, 321, 622
AlwI GGATC 2 cut(s) 40, 295
Aor13HI TCCGGA 1 cut(s) 173
AoxI GGCC 2 cut(s) 1382, 1397
ApeKI GCWGC 6 cut(s) 217, 518, 644, 998, 1420, 1470
ApoI RAATTY 3 cut(s) 116, 1156, 1269
Asp700I GAANNNNTTC 1 cut(s) 1149
AspS9I GGNCC 1 cut(s) 1578
AsuC2I CCSGG 1 cut(s) 481
AsuHPI GGTGA 5 cut(s) 112, 350, 425, 682, 1341
AsuNHI GCTAGC 1 cut(s) 535
AvaII GGWCC 1 cut(s) 1578
AxyI CCTNAGG 1 cut(s) 1200
BanII GRGCYC 1 cut(s) 1233
BauI CACGAG 1 cut(s) 756
BbvI GCAGC 6 cut(s) 229, 505, 656, 1010, 1407, 1482
BciT130I CCWGG 2 cut(s) 375, 1120
BciVI GTATCC 3 cut(s) 346, 1199, 1531
BcnI CCSGG 1 cut(s) 481
BcoDI GTCTC 3 cut(s) 194, 321, 622
BfaI CTAG 6 cut(s) 536, 542, 669, 782, 1076, 1487
BfmI CTRYAG 1 cut(s) 642
BfuI GTATCC 3 cut(s) 346, 1199, 1531
BisI GCNGC 6 cut(s) 218, 519, 645, 999, 1421, 1471
BlsI GCNGC 6 cut(s) 219, 520, 646, 1000, 1422, 1472
BmcAI AGTACT 1 cut(s) 778
Bme1390I CCNGG 3 cut(s) 375, 481, 1120
Bme18I GGWCC 1 cut(s) 1578
BmgT120I GGNCC 1 cut(s) 1578
BmrFI CCNGG 3 cut(s) 375, 481, 1120
BmsI GCATC 3 cut(s) 229, 685, 1078
BmtI GCTAGC 1 cut(s) 539
BpmI CTGGAG 1 cut(s) 1451
BpuEI CTTGAG 1 cut(s) 1439
BpuMI CCSGG 1 cut(s) 481
BsaI GGTCTC 1 cut(s) 194
BsaJI CCNNGG 4 cut(s) 360, 374, 456, 1119
BsaWI WCCGGW 1 cut(s) 173
BsaXI ACNNNNNCTCC 3 cut(s) 27, 964, 994
Bsc4I CCNNNNNNNGG 6 cut(s) 55, 741, 870, 945, 1125, 1406
Bse118I RCCGGY 1 cut(s) 335
Bse1I ACTGG 3 cut(s) 567, 1180, 1581
Bse21I CCTNAGG 1 cut(s) 1200
BseAI TCCGGA 1 cut(s) 173
BseBI CCWGG 2 cut(s) 375, 1120
BseDI CCNNGG 4 cut(s) 360, 374, 456, 1119
BseLI CCNNNNNNNGG 6 cut(s) 55, 741, 870, 945, 1125, 1406
BseMII CTCAG 2 cut(s) 138, 276
BseNI ACTGG 3 cut(s) 567, 1180, 1581
BseXI GCAGC 6 cut(s) 229, 505, 656, 1010, 1407, 1482
BshFI GGCC 2 cut(s) 1384, 1399
BsiSI CCGG 3 cut(s) 174, 336, 480
BslI CCNNNNNNNGG 6 cut(s) 55, 741, 870, 945, 1125, 1406
BsmAI GTCTC 3 cut(s) 194, 321, 622
BsmI GAATGC 2 cut(s) 232, 369
BsnI GGCC 2 cut(s) 1384, 1399
Bso31I GGTCTC 1 cut(s) 194
Bsp1286I GDGCHC 1 cut(s) 1233
Bsp13I TCCGGA 1 cut(s) 173
Bsp1407I TGTACA 1 cut(s) 910
Bsp143I GATC 3 cut(s) 45, 300, 632
Bsp19I CCATGG 1 cut(s) 360
BspACI CCGC 2 cut(s) 156, 365
BspANI GGCC 2 cut(s) 1384, 1399
BspCNI CTCAG 2 cut(s) 137, 277
BspEI TCCGGA 1 cut(s) 173
BspMAI CTGCAG 1 cut(s) 646
BspOI GCTAGC 1 cut(s) 539
BspPI GGATC 2 cut(s) 40, 295
BspTNI GGTCTC 1 cut(s) 194
BsrFI RCCGGY 1 cut(s) 335
BsrGI TGTACA 1 cut(s) 910
BsrI ACTGG 3 cut(s) 567, 1180, 1581
BssAI RCCGGY 1 cut(s) 335
BssECI CCNNGG 4 cut(s) 360, 374, 456, 1119
BssMI GATC 3 cut(s) 45, 300, 632
BssSI CACGAG 1 cut(s) 756
BssT1I CCWWGG 2 cut(s) 360, 456
Bst2BI CACGAG 1 cut(s) 756
Bst2UI CCWGG 2 cut(s) 375, 1120
Bst4CI ACNGT 7 cut(s) 91, 188, 495, 817, 904, 1098, 1465
Bst6I CTCTTC 2 cut(s) 306, 393
BstAPI GCANNNNNTGC 1 cut(s) 905
BstAUI TGTACA 1 cut(s) 910
BstC8I GCNNGC 3 cut(s) 367, 537, 1475
BstDEI CTNAG 5 cut(s) 124, 285, 629, 1200, 1297
BstDSI CCRYGG 1 cut(s) 360
BstENI CCTNNNNNAGG 1 cut(s) 943
BstKTI GATC 3 cut(s) 48, 303, 635
BstMAI GTCTC 3 cut(s) 194, 321, 622
BstMBI GATC 3 cut(s) 45, 300, 632
BstMWI GCNNNNNNNGC 5 cut(s) 671, 857, 896, 905, 1483
BstNI CCWGG 2 cut(s) 375, 1120
BstSCI CCNGG 3 cut(s) 373, 479, 1118
BstSFI CTRYAG 1 cut(s) 642
BstV1I GCAGC 6 cut(s) 229, 505, 656, 1010, 1407, 1482
BstXI CCANNNNNNTGG 1 cut(s) 1395
Bsu36I CCTNAGG 1 cut(s) 1200
BsuI GTATCC 3 cut(s) 346, 1199, 1531
BsuRI GGCC 2 cut(s) 1384, 1399
BtgI CCRYGG 1 cut(s) 360
BtsI GCAGTG 1 cut(s) 591
BtsIMutI CAGTG 5 cut(s) 574, 575, 591, 1083, 1173
Cac8I GCNNGC 3 cut(s) 367, 537, 1475
Cfr10I RCCGGY 1 cut(s) 335
Cfr13I GGNCC 1 cut(s) 1578
Csp6I GTAC 2 cut(s) 777, 911
CviAII CATG 5 cut(s) 361, 715, 1013, 1339, 1395
CviQI GTAC 2 cut(s) 777, 911
DdeI CTNAG 5 cut(s) 124, 285, 629, 1200, 1297
DpnI GATC 3 cut(s) 47, 302, 634
DpnII GATC 3 cut(s) 45, 300, 632
DraI TTTAAA 2 cut(s) 706, 1039
DraIII CACNNNGTG 1 cut(s) 611
Eam1104I CTCTTC 2 cut(s) 306, 393
EarI CTCTTC 2 cut(s) 306, 393
EciI GGCGGA 1 cut(s) 171
Eco130I CCWWGG 2 cut(s) 360, 456
Eco24I GRGCYC 1 cut(s) 1233
Eco31I GGTCTC 1 cut(s) 194
Eco47I GGWCC 1 cut(s) 1578
Eco57I CTGAAG 3 cut(s) 366, 1136, 1200
Eco81I CCTNAGG 1 cut(s) 1200
EcoNI CCTNNNNNAGG 1 cut(s) 943
EcoRII CCWGG 2 cut(s) 373, 1118
EcoT14I CCWWGG 2 cut(s) 360, 456
EcoT38I GRGCYC 1 cut(s) 1233
ErhI CCWWGG 2 cut(s) 360, 456
FaeI CATG 5 cut(s) 364, 718, 1016, 1342, 1398
FatI CATG 5 cut(s) 360, 714, 1012, 1338, 1394
FauI CCCGC 1 cut(s) 358
FauNDI CATATG 1 cut(s) 651
Fnu4HI GCNGC 6 cut(s) 218, 519, 645, 999, 1421, 1471
FriOI GRGCYC 1 cut(s) 1233
Fsp4HI GCNGC 6 cut(s) 218, 519, 645, 999, 1421, 1471
FspBI CTAG 6 cut(s) 536, 542, 669, 782, 1076, 1487
GluI GCNGC 6 cut(s) 218, 519, 645, 999, 1421, 1471
GsuI CTGGAG 1 cut(s) 1451
HaeIII GGCC 2 cut(s) 1384, 1399
HapII CCGG 3 cut(s) 174, 336, 480
Hin1II CATG 5 cut(s) 364, 718, 1016, 1342, 1398
HincII GTYRAC 2 cut(s) 1048, 1081
HindII GTYRAC 2 cut(s) 1048, 1081
HindIII AAGCTT 2 cut(s) 663, 1559
HinfI GANTC 8 cut(s) 94, 103, 281, 314, 553, 728, 960, 1279
HpaII CCGG 3 cut(s) 174, 336, 480
HphI GGTGA 5 cut(s) 112, 350, 425, 682, 1341
Hpy166II GTNNAC 4 cut(s) 589, 813, 1048, 1081
Hpy188I TCNGA 7 cut(s) 17, 127, 286, 769, 924, 1155, 1278
Hpy188III TCNNGA 5 cut(s) 174, 193, 669, 782, 1430
Hpy8I GTNNAC 4 cut(s) 589, 813, 1048, 1081
Hpy99I CGWCG 1 cut(s) 1064
HpyAV CCTTC 5 cut(s) 283, 341, 677, 808, 1533
HpyCH4III ACNGT 7 cut(s) 91, 188, 495, 817, 904, 1098, 1465
HpyCH4IV ACGT 1 cut(s) 918
HpyF10VI GCNNNNNNNGC 5 cut(s) 671, 857, 896, 905, 1483
HpyF3I CTNAG 5 cut(s) 124, 285, 629, 1200, 1297
HpySE526I ACGT 1 cut(s) 918
Hsp92II CATG 5 cut(s) 364, 718, 1016, 1342, 1398
Kpn2I TCCGGA 1 cut(s) 173
Kzo9I GATC 3 cut(s) 45, 300, 632
LmnI GCTCC 2 cut(s) 715, 985
Lsp1109I GCAGC 6 cut(s) 229, 505, 656, 1010, 1407, 1482
LweI GCATC 3 cut(s) 229, 685, 1078
MaeI CTAG 6 cut(s) 536, 542, 669, 782, 1076, 1487
MaeII ACGT 1 cut(s) 918
MaeIII GTNAC 3 cut(s) 100, 244, 1021
MalI GATC 3 cut(s) 47, 302, 634
MboI GATC 3 cut(s) 45, 300, 632
MhlI GDGCHC 1 cut(s) 1233
MluCI AATT 8 cut(s) 116, 162, 597, 991, 1156, 1269, 1334, 1365
MlyI GAGTC 4 cut(s) 97, 323, 722, 1273
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 8 cut(s) 145, 738, 949, 1366, 1368, 1374, 1410, 1426
MroI TCCGGA 1 cut(s) 173
MroXI GAANNNNTTC 1 cut(s) 1149
MseI TTAA 9 cut(s) 549, 659, 705, 752, 773, 1038, 1130, 1136, 1250
MslI CAYNNNNRTG 3 cut(s) 237, 1110, 1393
MspA1I CMGCKG 1 cut(s) 1001
MspI CCGG 3 cut(s) 174, 336, 480
MspR9I CCNGG 3 cut(s) 375, 481, 1120
Mva1269I GAATGC 2 cut(s) 232, 369
MvaI CCWGG 2 cut(s) 375, 1120
MwoI GCNNNNNNNGC 5 cut(s) 671, 857, 896, 905, 1483
NciI CCSGG 1 cut(s) 481
NcoI CCATGG 1 cut(s) 360
NdeI CATATG 1 cut(s) 651
NdeII GATC 3 cut(s) 45, 300, 632
NheI GCTAGC 1 cut(s) 535
NlaIII CATG 5 cut(s) 364, 718, 1016, 1342, 1398
NmuCI GTSAC 2 cut(s) 100, 1021
PctI GAATGC 2 cut(s) 232, 369
PdmI GAANNNNTTC 1 cut(s) 1149
PfeI GAWTC 4 cut(s) 94, 281, 553, 960
PflFI GACNNNGTC 1 cut(s) 11
PflMI CCANNNNNTGG 1 cut(s) 1125
PfoI TCCNGGA 1 cut(s) 479
PkrI GCNGC 6 cut(s) 219, 520, 646, 1000, 1422, 1472
PleI GAGTC 4 cut(s) 97, 322, 722, 1273
PpsI GAGTC 4 cut(s) 97, 322, 722, 1273
Psp6I CCWGG 2 cut(s) 373, 1118
PspGI CCWGG 2 cut(s) 373, 1118
PspPI GGNCC 1 cut(s) 1578
PsrI GAACNNNNNNTAC 2 cut(s) 903, 935
PstI CTGCAG 1 cut(s) 646
PsyI GACNNNGTC 1 cut(s) 11
PvuII CAGCTG 1 cut(s) 1001
RsaI GTAC 2 cut(s) 778, 912
RsaNI GTAC 2 cut(s) 777, 911
RseI CAYNNNNRTG 3 cut(s) 237, 1110, 1393
SaqAI TTAA 9 cut(s) 549, 659, 705, 752, 773, 1038, 1130, 1136, 1250
SatI GCNGC 6 cut(s) 218, 519, 645, 999, 1421, 1471
Sau3AI GATC 3 cut(s) 45, 300, 632
Sau96I GGNCC 1 cut(s) 1578
ScaI AGTACT 1 cut(s) 778
SchI GAGTC 4 cut(s) 97, 323, 722, 1273
ScrFI CCNGG 3 cut(s) 375, 481, 1120
SduI GDGCHC 1 cut(s) 1233
SfaNI GCATC 3 cut(s) 229, 685, 1078
SfcI CTRYAG 1 cut(s) 642
SinI GGWCC 1 cut(s) 1578
SmiMI CAYNNNNRTG 3 cut(s) 237, 1110, 1393
SmlI CTYRAG 1 cut(s) 1454
SmoI CTYRAG 1 cut(s) 1454
Sse9I AATT 8 cut(s) 116, 162, 597, 991, 1156, 1269, 1334, 1365
SsiI CCGC 2 cut(s) 156, 365
SspI AATATT 2 cut(s) 1134, 1574
SspMI CTAG 6 cut(s) 536, 542, 669, 782, 1076, 1487
StyD4I CCNGG 3 cut(s) 373, 479, 1118
StyI CCWWGG 2 cut(s) 360, 456
TaaI ACNGT 7 cut(s) 91, 188, 495, 817, 904, 1098, 1465
TaiI ACGT 1 cut(s) 921
TaqI TCGA 1 cut(s) 1059
TasI AATT 8 cut(s) 116, 162, 597, 991, 1156, 1269, 1334, 1365
TatI WGTACW 2 cut(s) 776, 910
TfiI GAWTC 4 cut(s) 94, 281, 553, 960
Tru1I TTAA 9 cut(s) 549, 659, 705, 752, 773, 1038, 1130, 1136, 1250
Tru9I TTAA 9 cut(s) 549, 659, 705, 752, 773, 1038, 1130, 1136, 1250
TscAI CASTG 5 cut(s) 574, 582, 598, 1090, 1180
TseFI GTSAC 2 cut(s) 100, 1021
TseI GCWGC 6 cut(s) 217, 518, 644, 998, 1420, 1470
Tsp45I GTSAC 2 cut(s) 100, 1021
TspDTI ATGAA 6 cut(s) 753, 1004, 1094, 1327, 1383, 1530
TspGWI ACGGA 1 cut(s) 853
TspRI CASTG 5 cut(s) 574, 582, 598, 1090, 1180
Tth111I GACNNNGTC 1 cut(s) 11
Van91I CCANNNNNTGG 1 cut(s) 1125
VpaK11BI GGWCC 1 cut(s) 1578
XagI CCTNNNNNAGG 1 cut(s) 943
XapI RAATTY 3 cut(s) 116, 1156, 1269
XbaI TCTAGA 2 cut(s) 668, 781
XcmI CCANNNNNNNNNTGG 1 cut(s) 1392
XmnI GAANNNNTTC 1 cut(s) 1149
XspI CTAG 6 cut(s) 536, 542, 669, 782, 1076, 1487
ZrmI AGTACT 1 cut(s) 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.