ABC transporter C family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 120 - 378 | 1e-28 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 451 - 585 | 7.3e-20 | ABC transporter |
| ABC_membrane | PF00664 | 736 - 1000 | 4.7e-24 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1068 - 1216 | 3.2e-25 | ABC transporter |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1042, 3419 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 859, 2862 |
| AccII | CGCG | 2 cut(s) | 972, 1539 |
| AccIII | TCCGGA | 1 cut(s) | 1910 |
| AciI | CCGC | 4 cut(s) | 659, 1537, 1893, 2102 |
| AclWI | GGATC | 8 cut(s) | 892, 1186, 1411, 1647, 1742, 3218, 3434, 3447 |
| AcuI | CTGAAG | 7 cut(s) | 243, 480, 620, 1044, 2103, 2873, 2937 |
| AdeI | CACNNNGTG | 1 cut(s) | 2348 |
| AfaI | GTAC | 6 cut(s) | 7, 834, 1008, 2515, 2649, 3277 |
| AfeI | AGCGCT | 1 cut(s) | 3568 |
| AhlI | ACTAGT | 1 cut(s) | 3196 |
| AjnI | CCWGG | 4 cut(s) | 309, 778, 2110, 2855 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1039, 1071, 3818, 3850 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 929, 961 |
| Alw21I | GWGCWC | 3 cut(s) | 293, 775, 1099 |
| Alw26I | GTCTC | 6 cut(s) | 812, 1146, 1210, 1580, 1931, 2058 |
| AlwI | GGATC | 8 cut(s) | 892, 1186, 1411, 1647, 1742, 3218, 3434, 3447 |
| Aor13HI | TCCGGA | 1 cut(s) | 1910 |
| Aor51HI | AGCGCT | 1 cut(s) | 3568 |
| AoxI | GGCC | 7 cut(s) | 75, 115, 463, 1559, 3119, 3134, 3448 |
| ApeKI | GCWGC | 9 cut(s) | 595, 1133, 1778, 1954, 2255, 2381, 2735, 3157, 3513 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3753, 3785 |
| AseI | ATTAAT | 1 cut(s) | 156 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2886 |
| AspLEI | GCGC | 1 cut(s) | 3569 |
| AspS9I | GGNCC | 3 cut(s) | 76, 3769, 3861 |
| AsuC2I | CCSGG | 1 cut(s) | 2218 |
| AsuHPI | GGTGA | 6 cut(s) | 692, 1849, 2087, 2162, 2419, 3078 |
| AsuNHI | GCTAGC | 2 cut(s) | 1702, 2272 |
| AvaII | GGWCC | 2 cut(s) | 3769, 3861 |
| AxyI | CCTNAGG | 1 cut(s) | 2937 |
| BaeGI | GKGCMC | 1 cut(s) | 3422 |
| BamHI | GGATCC | 1 cut(s) | 3439 |
| BanI | GGYRCC | 2 cut(s) | 1042, 3419 |
| BanII | GRGCYC | 2 cut(s) | 293, 2970 |
| BauI | CACGAG | 1 cut(s) | 2493 |
| BbsI | GAAGAC | 2 cut(s) | 207, 1577 |
| Bbv12I | GWGCWC | 3 cut(s) | 293, 775, 1099 |
| BbvCI | CCTCAGC | 2 cut(s) | 996, 3383 |
| BbvI | GCAGC | 9 cut(s) | 607, 1145, 1765, 1966, 2242, 2393, 2747, 3144, 3525 |
| BccI | CCATC | 5 cut(s) | 1033, 3329, 3431, 3659, 3773 |
| BceAI | ACGGC | 1 cut(s) | 3492 |
| BciT130I | CCWGG | 4 cut(s) | 311, 780, 2112, 2857 |
| BciVI | GTATCC | 4 cut(s) | 1512, 2083, 2936, 3814 |
| BcnI | CCSGG | 1 cut(s) | 2218 |
| BcoDI | GTCTC | 6 cut(s) | 812, 1146, 1210, 1580, 1931, 2058 |
| BcuI | ACTAGT | 1 cut(s) | 3196 |
| BfmI | CTRYAG | 4 cut(s) | 836, 1717, 1773, 2379 |
| BfoI | RGCGCY | 1 cut(s) | 3570 |
| BfuI | GTATCC | 4 cut(s) | 1512, 2083, 2936, 3814 |
| BisI | GCNGC | 9 cut(s) | 596, 1134, 1779, 1955, 2256, 2382, 2736, 3158, 3514 |
| BlpI | GCTNAGC | 1 cut(s) | 131 |
| BlsI | GCNGC | 9 cut(s) | 597, 1135, 1780, 1956, 2257, 2383, 2737, 3159, 3515 |
| BmcAI | AGTACT | 1 cut(s) | 2515 |
| Bme1390I | CCNGG | 5 cut(s) | 311, 780, 2112, 2218, 2857 |
| Bme18I | GGWCC | 2 cut(s) | 3769, 3861 |
| BmgT120I | GGNCC | 3 cut(s) | 76, 3769, 3861 |
| BmiI | GGNNCC | 6 cut(s) | 698, 713, 1044, 1489, 3421, 3441 |
| BmrFI | CCNGG | 5 cut(s) | 311, 780, 2112, 2218, 2857 |
| BmrI | ACTGGG | 1 cut(s) | 15 |
| BmtI | GCTAGC | 2 cut(s) | 1706, 2276 |
| BmuI | ACTGGG | 1 cut(s) | 15 |
| BpiI | GAAGAC | 2 cut(s) | 207, 1577 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 275, 307, 1084, 1116, 3591, 3623 |
| BpmI | CTGGAG | 1 cut(s) | 3188 |
| Bpu10I | CCTNAGC | 2 cut(s) | 996, 3383 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 131 |
| BpuEI | CTTGAG | 8 cut(s) | 277, 362, 852, 1693, 3188, 3381, 3482, 3593 |
| BpuMI | CCSGG | 1 cut(s) | 2218 |
| BsaBI | GATNNNNATC | 1 cut(s) | 669 |
| BsaI | GGTCTC | 5 cut(s) | 812, 1146, 1210, 1580, 1931 |
| BsaJI | CCNNGG | 5 cut(s) | 2097, 2111, 2193, 2856, 3592 |
| BsaWI | WCCGGW | 1 cut(s) | 1910 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1143, 1173, 2701, 2731 |
| Bse118I | RCCGGY | 1 cut(s) | 2072 |
| Bse1I | ACTGG | 5 cut(s) | 21, 2304, 2917, 3580, 3864 |
| Bse21I | CCTNAGG | 1 cut(s) | 2937 |
| Bse3DI | GCAATG | 1 cut(s) | 1491 |
| Bse8I | GATNNNNATC | 1 cut(s) | 669 |
| BseAI | TCCGGA | 1 cut(s) | 1910 |
| BseBI | CCWGG | 4 cut(s) | 311, 780, 2112, 2857 |
| BseDI | CCNNGG | 5 cut(s) | 2097, 2111, 2193, 2856, 3592 |
| BseGI | GGATG | 6 cut(s) | 204, 670, 1044, 1082, 3390, 3423 |
| BseJI | GATNNNNATC | 1 cut(s) | 669 |
| BseMI | GCAATG | 1 cut(s) | 1491 |
| BseNI | ACTGG | 5 cut(s) | 21, 2304, 2917, 3580, 3864 |
| BseRI | GAGGAG | 1 cut(s) | 1089 |
| BseSI | GKGCMC | 1 cut(s) | 3422 |
| BseXI | GCAGC | 9 cut(s) | 607, 1145, 1765, 1966, 2242, 2393, 2747, 3144, 3525 |
| BseYI | CCCAGC | 2 cut(s) | 89, 3569 |
| BsgI | GTGCAG | 1 cut(s) | 1779 |
| Bsh1236I | CGCG | 2 cut(s) | 972, 1539 |
| BshFI | GGCC | 7 cut(s) | 77, 117, 465, 1561, 3121, 3136, 3450 |
| BshNI | GGYRCC | 2 cut(s) | 1042, 3419 |
| BsiHKAI | GWGCWC | 3 cut(s) | 293, 775, 1099 |
| BsiSI | CCGG | 3 cut(s) | 1911, 2073, 2217 |
| BslFI | GGGAC | 3 cut(s) | 835, 1543, 3247 |
| BsmAI | GTCTC | 6 cut(s) | 812, 1146, 1210, 1580, 1931, 2058 |
| BsmFI | GGGAC | 3 cut(s) | 835, 1543, 3247 |
| BsmI | GAATGC | 4 cut(s) | 371, 1969, 2106, 3713 |
| BsnI | GGCC | 7 cut(s) | 77, 117, 465, 1561, 3121, 3136, 3450 |
| Bso31I | GGTCTC | 5 cut(s) | 812, 1146, 1210, 1580, 1931 |
| Bsp1286I | GDGCHC | 5 cut(s) | 293, 775, 1099, 2970, 3422 |
| Bsp13I | TCCGGA | 1 cut(s) | 1910 |
| Bsp1407I | TGTACA | 1 cut(s) | 2647 |
| Bsp143I | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 131 |
| Bsp19I | CCATGG | 1 cut(s) | 2097 |
| Bsp68I | TCGCGA | 1 cut(s) | 972 |
| BspACI | CCGC | 4 cut(s) | 659, 1537, 1893, 2102 |
| BspANI | GGCC | 7 cut(s) | 77, 117, 465, 1561, 3121, 3136, 3450 |
| BspEI | TCCGGA | 1 cut(s) | 1910 |
| BspFNI | CGCG | 2 cut(s) | 972, 1539 |
| BspHI | TCATGA | 1 cut(s) | 1792 |
| BspLI | GGNNCC | 6 cut(s) | 698, 713, 1044, 1489, 3421, 3441 |
| BspMAI | CTGCAG | 1 cut(s) | 2383 |
| BspOI | GCTAGC | 2 cut(s) | 1706, 2276 |
| BspPI | GGATC | 8 cut(s) | 892, 1186, 1411, 1647, 1742, 3218, 3434, 3447 |
| BspQI | GCTCTTC | 2 cut(s) | 281, 1136 |
| BspT107I | GGYRCC | 2 cut(s) | 1042, 3419 |
| BspTNI | GGTCTC | 5 cut(s) | 812, 1146, 1210, 1580, 1931 |
| BsrDI | GCAATG | 1 cut(s) | 1491 |
| BsrFI | RCCGGY | 1 cut(s) | 2072 |
| BsrGI | TGTACA | 1 cut(s) | 2647 |
| BsrI | ACTGG | 5 cut(s) | 21, 2304, 2917, 3580, 3864 |
| BssAI | RCCGGY | 1 cut(s) | 2072 |
| BssECI | CCNNGG | 5 cut(s) | 2097, 2111, 2193, 2856, 3592 |
| BssMI | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| BssSI | CACGAG | 1 cut(s) | 2493 |
| BssT1I | CCWWGG | 3 cut(s) | 2097, 2193, 3592 |
| Bst2BI | CACGAG | 1 cut(s) | 2493 |
| Bst2UI | CCWGG | 4 cut(s) | 311, 780, 2112, 2857 |
| Bst6I | CTCTTC | 7 cut(s) | 281, 933, 1136, 1236, 2043, 2130, 3592 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 730, 1766, 2642, 3668 |
| BstAUI | TGTACA | 1 cut(s) | 2647 |
| BstC8I | GCNNGC | 5 cut(s) | 1437, 1704, 2104, 2274, 3518 |
| BstDSI | CCRYGG | 1 cut(s) | 2097 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2680 |
| BstF5I | GGATG | 6 cut(s) | 204, 670, 1044, 1082, 3390, 3423 |
| BstFNI | CGCG | 2 cut(s) | 972, 1539 |
| BstH2I | RGCGCY | 1 cut(s) | 3570 |
| BstHHI | GCGC | 1 cut(s) | 3569 |
| BstKTI | GATC | 9 cut(s) | 900, 1194, 1216, 1406, 1642, 1750, 2372, 3213, 3442 |
| BstMAI | GTCTC | 6 cut(s) | 812, 1146, 1210, 1580, 1931, 2058 |
| BstMBI | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| BstNI | CCWGG | 4 cut(s) | 311, 780, 2112, 2857 |
| BstSCI | CCNGG | 5 cut(s) | 309, 778, 2110, 2216, 2855 |
| BstSFI | CTRYAG | 4 cut(s) | 836, 1717, 1773, 2379 |
| BstSLI | GKGCMC | 1 cut(s) | 3422 |
| BstUI | CGCG | 2 cut(s) | 972, 1539 |
| BstV1I | GCAGC | 9 cut(s) | 607, 1145, 1765, 1966, 2242, 2393, 2747, 3144, 3525 |
| BstV2I | GAAGAC | 2 cut(s) | 207, 1577 |
| BstX2I | RGATCY | 3 cut(s) | 897, 1639, 3439 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3132 |
| BstYI | RGATCY | 3 cut(s) | 897, 1639, 3439 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2937 |
| BsuI | GTATCC | 4 cut(s) | 1512, 2083, 2936, 3814 |
| BsuRI | GGCC | 7 cut(s) | 77, 117, 465, 1561, 3121, 3136, 3450 |
| BtgI | CCRYGG | 1 cut(s) | 2097 |
| BtgZI | GCGATG | 1 cut(s) | 475 |
| BtsCI | GGATG | 6 cut(s) | 204, 670, 1044, 1082, 3390, 3423 |
| BtsI | GCAGTG | 2 cut(s) | 2328, 3322 |
| BtsIMutI | CAGTG | 9 cut(s) | 445, 2311, 2312, 2328, 2820, 2910, 3322, 3711, 3760 |
| BtuMI | TCGCGA | 1 cut(s) | 972 |
| Cac8I | GCNNGC | 5 cut(s) | 1437, 1704, 2104, 2274, 3518 |
| CciI | TCATGA | 1 cut(s) | 1792 |
| CfoI | GCGC | 1 cut(s) | 3569 |
| Cfr10I | RCCGGY | 1 cut(s) | 2072 |
| Cfr13I | GGNCC | 3 cut(s) | 76, 3769, 3861 |
| CseI | GACGC | 1 cut(s) | 833 |
| CsiI | ACCWGGT | 1 cut(s) | 309 |
| Csp6I | GTAC | 6 cut(s) | 6, 833, 1007, 2514, 2648, 3276 |
| CviQI | GTAC | 6 cut(s) | 6, 833, 1007, 2514, 2648, 3276 |
| DpnI | GATC | 9 cut(s) | 899, 1193, 1215, 1405, 1641, 1749, 2371, 3212, 3441 |
| DpnII | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| DraI | TTTAAA | 2 cut(s) | 2443, 2776 |
| DraIII | CACNNNGTG | 1 cut(s) | 2348 |
| Eam1104I | CTCTTC | 7 cut(s) | 281, 933, 1136, 1236, 2043, 2130, 3592 |
| EarI | CTCTTC | 7 cut(s) | 281, 933, 1136, 1236, 2043, 2130, 3592 |
| EciI | GGCGGA | 1 cut(s) | 1908 |
| Ecl136II | GAGCTC | 1 cut(s) | 291 |
| Eco130I | CCWWGG | 3 cut(s) | 2097, 2193, 3592 |
| Eco147I | AGGCCT | 2 cut(s) | 465, 3450 |
| Eco24I | GRGCYC | 2 cut(s) | 293, 2970 |
| Eco31I | GGTCTC | 5 cut(s) | 812, 1146, 1210, 1580, 1931 |
| Eco32I | GATATC | 1 cut(s) | 3346 |
| Eco47I | GGWCC | 2 cut(s) | 3769, 3861 |
| Eco47III | AGCGCT | 1 cut(s) | 3568 |
| Eco53kI | GAGCTC | 1 cut(s) | 291 |
| Eco57I | CTGAAG | 7 cut(s) | 243, 480, 620, 1044, 2103, 2873, 2937 |
| Eco81I | CCTNAGG | 1 cut(s) | 2937 |
| EcoICRI | GAGCTC | 1 cut(s) | 291 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2680 |
| EcoRI | GAATTC | 3 cut(s) | 1282, 3187, 3621 |
| EcoRII | CCWGG | 4 cut(s) | 309, 778, 2110, 2855 |
| EcoRV | GATATC | 1 cut(s) | 3346 |
| EcoT14I | CCWWGG | 3 cut(s) | 2097, 2193, 3592 |
| EcoT22I | ATGCAT | 2 cut(s) | 265, 1082 |
| EcoT38I | GRGCYC | 2 cut(s) | 293, 2970 |
| ErhI | CCWWGG | 3 cut(s) | 2097, 2193, 3592 |
| FaqI | GGGAC | 3 cut(s) | 835, 1543, 3247 |
| FauI | CCCGC | 1 cut(s) | 2095 |
| FauNDI | CATATG | 1 cut(s) | 2388 |
| Fnu4HI | GCNGC | 9 cut(s) | 596, 1134, 1779, 1955, 2256, 2382, 2736, 3158, 3514 |
| FokI | GGATG | 6 cut(s) | 191, 677, 1051, 1089, 3377, 3410 |
| FriOI | GRGCYC | 2 cut(s) | 293, 2970 |
| Fsp4HI | GCNGC | 9 cut(s) | 596, 1134, 1779, 1955, 2256, 2382, 2736, 3158, 3514 |
| GlaI | GCGC | 1 cut(s) | 3568 |
| GluI | GCNGC | 9 cut(s) | 596, 1134, 1779, 1955, 2256, 2382, 2736, 3158, 3514 |
| GsaI | CCCAGC | 2 cut(s) | 93, 3573 |
| GsuI | CTGGAG | 1 cut(s) | 3188 |
| HaeII | RGCGCY | 1 cut(s) | 3570 |
| HaeIII | GGCC | 7 cut(s) | 77, 117, 465, 1561, 3121, 3136, 3450 |
| HapII | CCGG | 3 cut(s) | 1911, 2073, 2217 |
| HgaI | GACGC | 1 cut(s) | 833 |
| HhaI | GCGC | 1 cut(s) | 3569 |
| Hin6I | GCGC | 1 cut(s) | 3567 |
| HinP1I | GCGC | 1 cut(s) | 3567 |
| HincII | GTYRAC | 2 cut(s) | 2785, 2818 |
| HindII | GTYRAC | 2 cut(s) | 2785, 2818 |
| HindIII | AAGCTT | 4 cut(s) | 602, 1596, 2400, 3842 |
| HpaII | CCGG | 3 cut(s) | 1911, 2073, 2217 |
| HphI | GGTGA | 6 cut(s) | 692, 1849, 2087, 2162, 2419, 3078 |
| Hpy166II | GTNNAC | 9 cut(s) | 6, 337, 649, 1009, 2326, 2550, 2785, 2818, 3278 |
| Hpy8I | GTNNAC | 9 cut(s) | 6, 337, 649, 1009, 2326, 2550, 2785, 2818, 3278 |
| HpyCH4IV | ACGT | 1 cut(s) | 2655 |
| HpySE526I | ACGT | 1 cut(s) | 2655 |
| HspAI | GCGC | 1 cut(s) | 3567 |
| Kpn2I | TCCGGA | 1 cut(s) | 1910 |
| Kzo9I | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| LguI | GCTCTTC | 2 cut(s) | 281, 1136 |
| LmnI | GCTCC | 5 cut(s) | 711, 1102, 2452, 2722, 3564 |
| Lsp1109I | GCAGC | 9 cut(s) | 607, 1145, 1765, 1966, 2242, 2393, 2747, 3144, 3525 |
| MabI | ACCWGGT | 1 cut(s) | 309 |
| MaeII | ACGT | 1 cut(s) | 2655 |
| MaeIII | GTNAC | 6 cut(s) | 23, 428, 1837, 1981, 2758, 3755 |
| MalI | GATC | 9 cut(s) | 899, 1193, 1215, 1405, 1641, 1749, 2371, 3212, 3441 |
| MboI | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| MflI | RGATCY | 3 cut(s) | 897, 1639, 3439 |
| MhlI | GDGCHC | 5 cut(s) | 293, 775, 1099, 2970, 3422 |
| MlyI | GAGTC | 6 cut(s) | 545, 1834, 2060, 2459, 3010, 3650 |
| MmeI | TCCRAC | 3 cut(s) | 2065, 3232, 3764 |
| Mph1103I | ATGCAT | 2 cut(s) | 265, 1082 |
| MroI | TCCGGA | 1 cut(s) | 1910 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2886 |
| MslI | CAYNNNNRTG | 5 cut(s) | 659, 1797, 1974, 2847, 3130 |
| MspA1I | CMGCKG | 7 cut(s) | 89, 598, 635, 1064, 1323, 1778, 2738 |
| MspI | CCGG | 3 cut(s) | 1911, 2073, 2217 |
| MspR9I | CCNGG | 5 cut(s) | 311, 780, 2112, 2218, 2857 |
| Mva1269I | GAATGC | 4 cut(s) | 371, 1969, 2106, 3713 |
| MvaI | CCWGG | 4 cut(s) | 311, 780, 2112, 2857 |
| MvnI | CGCG | 2 cut(s) | 972, 1539 |
| NciI | CCSGG | 1 cut(s) | 2218 |
| NcoI | CCATGG | 1 cut(s) | 2097 |
| NdeI | CATATG | 1 cut(s) | 2388 |
| NdeII | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| NheI | GCTAGC | 2 cut(s) | 1702, 2272 |
| NlaIV | GGNNCC | 6 cut(s) | 698, 713, 1044, 1489, 3421, 3441 |
| NmeAIII | GCCGAG | 1 cut(s) | 3336 |
| NmuCI | GTSAC | 3 cut(s) | 1837, 2758, 3755 |
| NruI | TCGCGA | 1 cut(s) | 972 |
| NsiI | ATGCAT | 2 cut(s) | 265, 1082 |
| PagI | TCATGA | 1 cut(s) | 1792 |
| PceI | AGGCCT | 2 cut(s) | 465, 3450 |
| PciSI | GCTCTTC | 2 cut(s) | 281, 1136 |
| PctI | GAATGC | 4 cut(s) | 371, 1969, 2106, 3713 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2886 |
| PflFI | GACNNNGTC | 1 cut(s) | 1157 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 859, 2862 |
| PfoI | TCCNGGA | 1 cut(s) | 2216 |
| PkrI | GCNGC | 9 cut(s) | 597, 1135, 1780, 1956, 2257, 2383, 2737, 3159, 3515 |
| PleI | GAGTC | 6 cut(s) | 544, 1834, 2059, 2459, 3010, 3650 |
| PpsI | GAGTC | 6 cut(s) | 544, 1834, 2059, 2459, 3010, 3650 |
| PshBI | ATTAAT | 1 cut(s) | 156 |
| Psp124BI | GAGCTC | 1 cut(s) | 293 |
| Psp6I | CCWGG | 4 cut(s) | 309, 778, 2110, 2855 |
| PspFI | CCCAGC | 2 cut(s) | 89, 3569 |
| PspGI | CCWGG | 4 cut(s) | 309, 778, 2110, 2855 |
| PspN4I | GGNNCC | 6 cut(s) | 698, 713, 1044, 1489, 3421, 3441 |
| PspPI | GGNCC | 3 cut(s) | 76, 3769, 3861 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2640, 2672 |
| PstI | CTGCAG | 1 cut(s) | 2383 |
| PsuI | RGATCY | 3 cut(s) | 897, 1639, 3439 |
| PsyI | GACNNNGTC | 1 cut(s) | 1157 |
| PvuII | CAGCTG | 7 cut(s) | 89, 598, 635, 1064, 1323, 1778, 2738 |
| RruI | TCGCGA | 1 cut(s) | 972 |
| RsaI | GTAC | 6 cut(s) | 7, 834, 1008, 2515, 2649, 3277 |
| RsaNI | GTAC | 6 cut(s) | 6, 833, 1007, 2514, 2648, 3276 |
| RseI | CAYNNNNRTG | 5 cut(s) | 659, 1797, 1974, 2847, 3130 |
| SacI | GAGCTC | 1 cut(s) | 293 |
| SapI | GCTCTTC | 2 cut(s) | 281, 1136 |
| SatI | GCNGC | 9 cut(s) | 596, 1134, 1779, 1955, 2256, 2382, 2736, 3158, 3514 |
| Sau3AI | GATC | 9 cut(s) | 897, 1191, 1213, 1403, 1639, 1747, 2369, 3210, 3439 |
| Sau96I | GGNCC | 3 cut(s) | 76, 3769, 3861 |
| ScaI | AGTACT | 1 cut(s) | 2515 |
| SchI | GAGTC | 6 cut(s) | 545, 1834, 2060, 2459, 3010, 3650 |
| ScrFI | CCNGG | 5 cut(s) | 311, 780, 2112, 2218, 2857 |
| SduI | GDGCHC | 5 cut(s) | 293, 775, 1099, 2970, 3422 |
| SexAI | ACCWGGT | 1 cut(s) | 309 |
| SfcI | CTRYAG | 4 cut(s) | 836, 1717, 1773, 2379 |
| SinI | GGWCC | 2 cut(s) | 3769, 3861 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 659, 1797, 1974, 2847, 3130 |
| SmlI | CTYRAG | 8 cut(s) | 292, 377, 867, 1672, 3203, 3396, 3497, 3608 |
| SmoI | CTYRAG | 8 cut(s) | 292, 377, 867, 1672, 3203, 3396, 3497, 3608 |
| SpeI | ACTAGT | 1 cut(s) | 3196 |
| SseBI | AGGCCT | 2 cut(s) | 465, 3450 |
| SsiI | CCGC | 4 cut(s) | 659, 1537, 1893, 2102 |
| SspI | AATATT | 2 cut(s) | 2871, 3857 |
| SstI | GAGCTC | 1 cut(s) | 293 |
| StuI | AGGCCT | 2 cut(s) | 465, 3450 |
| StyD4I | CCNGG | 5 cut(s) | 309, 778, 2110, 2216, 2855 |
| StyI | CCWWGG | 3 cut(s) | 2097, 2193, 3592 |
| TaiI | ACGT | 1 cut(s) | 2658 |
| TaqI | TCGA | 6 cut(s) | 33, 539, 589, 673, 956, 3654 |
| TatI | WGTACW | 5 cut(s) | 5, 1006, 2513, 2647, 3275 |
| TscAI | CASTG | 9 cut(s) | 445, 2311, 2319, 2335, 2827, 2917, 3322, 3718, 3760 |
| TseFI | GTSAC | 3 cut(s) | 1837, 2758, 3755 |
| TseI | GCWGC | 9 cut(s) | 595, 1133, 1778, 1954, 2255, 2381, 2735, 3157, 3513 |
| Tsp45I | GTSAC | 3 cut(s) | 1837, 2758, 3755 |
| TspGWI | ACGGA | 1 cut(s) | 2590 |
| TspRI | CASTG | 9 cut(s) | 445, 2311, 2319, 2335, 2827, 2917, 3322, 3718, 3760 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1157 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 859, 2862 |
| VpaK11BI | GGWCC | 2 cut(s) | 3769, 3861 |
| VspI | ATTAAT | 1 cut(s) | 156 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2680 |
| XbaI | TCTAGA | 4 cut(s) | 196, 2405, 2518, 3631 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 86, 3129 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2886 |
| ZrmI | AGTACT | 1 cut(s) | 2515 |
| Zsp2I | ATGCAT | 2 cut(s) | 265, 1082 |