Rroxscaffold_2G00102380

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
24513192 .. 24519332
6141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00102380.1

Sequence Viewer

Length: 3645 bp
ATGCATTACTACCAGGTCAGCCATAGAGATTTCTACGGCAGTCTGGCTTCCTTGGGAGTTGACTACTTGGTAAATAGTACATACACTACTAAATTTCTATGTGAATTGTTGATTGGAGAATACATTTGCTGCTATCTTACACTTGCAGTGAAGCAATATTCAGTATTCTGGGAGTACTTACCCCTCTGGATTTTTGATTCAGAACTTAGAAATCCCAGTAACTCTGTCGATAAACAAGGCATGGATAGCAGCCTATCTGAGCCTTTGTTGGCCCAAAATTCAGCTGGGAAAACCCAACAAACAGAACTAGGCCATGCGAGTTTCCTTAGTAAATTGATATTTTCTTGGATTAATCCTTTACTGAAATTGGGTTTCTCAAAAACTTTAGCTCCCGAAGACATACCTTCTCTGGTTTCTGAAGATAAAGCCAATGTAGCATACCAAAAGTTTGCTAATGCATTTGAATCCCTGTCAAGCGAGAAGTGCTCAAGCACTATGAAGAACCTGGTTCTCAGAGCCATAGCAAAAGTTTACATGAAAGAAAATATATGGATAGTATTTTGTGCATTCCTCAAGACTATTGCAGTGGTTGCTTCCCCTCTTATACTCTATGGTTTTGTAAGTTACTCAAACAGTGAGAAGGAAAGCCTCTCTGAAGGCCTCATGTTAGTAGGGTGTCTAATTATTGCCAAAGTAGTTGAATCTCTGAGCGAGAGATGCTGGTTCTTTGAGTCAAGAAGGTGTGGAATGAGAATAAGGTCAGCCTTAATGGTGGCAGTTTATCGAAAGCAGCTGAAGCTTTCTAGTTTGGGAAGGACAAGGCACTCAGCTGGAGAGATTGTGAACTACATAGCGGTGGATGCTTATCGAATGGGTGAGTTCCTGTGGTGGTTCCATTCAATGTGGAGCCTTTCGTTGCAACTATTGCTTTGCATTGTTGTTCTTTATGTGGTGGTAGGTGTTGGTGCTCTGCCTGGCTTAATTCCTCTAATTATTTGTGGTCTCCTCAATGTGCCATTTGCAAAGGTACTACAGAAGCGTCAGTCCCAAATCATGGTAGCTCAAGATGAGAGGCTTAGAGCCACTTCTGAGATCCTAAATAGTATAAAAATCATTAAGTTGCAATCATGGGAAGAGAAGTTCAAGAACTCGATTGATTCCCTTCGCAAAAGAGAGTTCAAACCATTGGCTGAGGCACAAGTACACAAGGCTTATGGAACTGTTTTGTTCTGGATGGCACCAACTATCATTTCTTCAGTTGTTTTTGTAGGATGCATTGTTTTCCAGAGTGCTCCTCTAAATGCAATTACCATATTTACTGTTCTAGCAGCCTTGAAGAGCATGGGAGACCCTGTCCGAGTTATACCAGAAGCTCTTTCAGTAATGATCCAAGTCAAGGTCTCATTTGATCGGCTTAATGCTTTTTTGATTGATGAAGAGATAATGGATAATGAAATAAGAGAACTCACATCACAGAATTCAGATGACATCTTAAAAGTAGAACAAGGTATGTTCAGCTGGAATCCTGAATCAAGAATCCCAAATCTGACAGATGTGAATTTAGAAGTACAATGGGAGCAAAAAGTTGCAGTTTGTGGATCAGTTGGTGCTGGAAAATCATCTCTTTTGCTTGCTATTCTTGGAGAAATTCCCAAAATCTCTGGAAATGTTGATGTATTTGGAACCATTGCCTATGTTTCTCAGACATCTTGGATACAAAGTGGGACAGTTCGCGATAACATACTTTATAGGAGGCCAATGGAGAAGACTAAATATCAGGAGACCATAAAAGCTTGTGCTTTGGATAAAGATATTGATAGCTTTCAGCACGGGGATCTTACTGAAATAGGGCAGAGGGGCATTAACTTGAGTGGAGGCCAGAAGCAAAGGATTCAGCTAGCAAGAGCTGTCTATAGTGATGCTGATATCTATCTACTTGATGATCCCTTTAGTGCAGTTGATGCAACTACAGCTGCAATTTTATTTCATGATTGTGTCAAGGTTGCTTTAGCAAAGAAAACTGTGATTCTGGTGACTCATCAAGTTGAATTTCTCTCAGAAGTTGATAACATCTTGGTAATGGAGAGCGGAAGAATTACTCAATCCGGAAGCTATGAGGGTCTCTTGACAAAAGGAACTGCATTTGAGCAGCTTCTGAATGCTCATAGAGATGCAGTAACAACATTGGACAGCCCAAACTACCAAACCCAAGAACAATCTGAGAAGGAAGATATGATCCAGCCAGAAGAGTCTCAAGGGACTAATCTTACTGGTGAAACTGAAGGGGATACTTCCATGGCGGGCATTCCTGGGGTTCAGCTAACAGAAGAAGAAGAGAAAGAGATTGGTGATGTTAGCTGGAAGTCCTGTTGGGATTATATTTTCGTTTCCAAGGGAACACTTCTTCTATTCTCAGGGATATTATCACAGTTTTGTTTTTCTATTTTTCTGGCTGCTTCAACTTATTGGCTAGCTCTAGGCATTAAGATTCCTAATATAACCAGTGCTACACTGATTGGAGTTTACACTGCAATTTCTTCACTCTGTGCTGTCTTTGTATTTCTAAGGTCATATTCTGCAGCCCATATGGGATTAAAAGCTTCTAGAGCCTTTTTTGAAGGTTTCACCGATGCTATATTTAAAGCTCCCATGTTGTTCTTTGACTCAACCCCTGTTGGGAGGATTTTAACACGAGCTTCATCAGATTTAAGTACTCTAGATTTTGAGATACCCTTCTCCATTATGTTTACTGTTTCGGCTGTTATTCAACTGCTGACAACTATTGCAGTTCTGGCTTCCGTGATATGGGAAGTTCTCATTGTAGCTATTCTCGCTACTGTTGCTGCACAATACGTTCAGAGATATTGTCAAGCCTCTGCAAGGGAACTAACAAGAATCAATGGAACAACCAAAGCTCCTGTTATGAATTTTGCAGCTGAAACATCACTCGGAGTGGTCACTATAAGGGCTTTTAAAATGGTCAACAGGTTCTTCGACGACTACCTAAAGCTAGTTGACACTGATGCCAGACTGTTCTTTCATTCTAATGCAACCAGGGAATGGTTAATATTAAGGACAGAAGCAATTCAGAATTTGACCCTTTACGCCACTGGTTTTCTCCTTGTTTTACTTCCTAAGGGATATATTTCTTCAGGGCTTGTGGGGCTCTCTCTTTCTTACGCCTTAACACTGACAACAACACAAATTTATCTGACTCAATGGTATTGCAACTTAGCAAACAACATAATATCAGTTGAAAGGATAAAACAATTCATGCAGATTTCACCAGAGCCTCCTGCAATAGTGGAGGACAAGAGGCCACCAATTTCATGGCCTCAAAAGGGTAGAATAGAGCTGCATAGTCTGGAGATAAAATATCGTCCGAATTCTCCACTAGTTCTCAAGGGGATCACTTGCACATTTCAAGAAGGGACTAGAATAGGAGTTGTTGGAAGGACAGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGTTTAGTAGAGCCGAGCAGTGGAAAAATTATTATAGATGGACTTGATATCTGCTCTGTTGGTCTAAAAGATTTGAGAATGAAGCTCAGCATCATCCCTCAAGAAACAACTCTTTTAGGGGCACCATCCGAACCAACTTGGATCCTCTAG

Protein Analysis

1214

Amino Acids

135.07

Weight (kDa)

6.05

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 185 - 443 6.7e-28 ABC transporter transmembrane region
ABC_tran PF00005 516 - 650 5e-19 ABC transporter
ABC_membrane PF00664 802 - 1066 1.6e-22 ABC transporter transmembrane region
ABC_tran PF00005 1134 - 1204 1.6e-12 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1237, 3616
AccB7I CCANNNNNTGG 2 cut(s) 1054, 3060
AccBSI CCGCTC 1 cut(s) 2088
AccII CGCG 1 cut(s) 1734
AccIII TCCGGA 1 cut(s) 2105
AciI CCGC 3 cut(s) 854, 2088, 2300
AclWI GGATC 9 cut(s) 1087, 1381, 1606, 1842, 1937, 2230, 3416, 3631, 3644
AcuI CTGAAG 6 cut(s) 438, 675, 815, 1239, 2301, 3135
AdeI CACNNNGTG 1 cut(s) 2546
AfaI GTAC 7 cut(s) 79, 176, 1029, 1203, 1569, 2713, 3475
AfiI CCNNNNNNNGG 8 cut(s) 1054, 1396, 2676, 2805, 2880, 3060, 3341, 3515
AhlI ACTAGT 1 cut(s) 3394
AjnI CCWGG 5 cut(s) 12, 504, 973, 2308, 3053
AjuI GAANNNNNNNTTGG 4 cut(s) 96, 128, 1234, 1266
AloI GAACNNNNNNTCC 2 cut(s) 1124, 1156
Alw21I GWGCWC 3 cut(s) 488, 970, 1294
Alw26I GTCTC 6 cut(s) 1007, 1341, 1405, 1775, 2126, 2256
AlwI GGATC 9 cut(s) 1087, 1381, 1606, 1842, 1937, 2230, 3416, 3631, 3644
AlwNI CAGNNNCTG 1 cut(s) 2155
Aor13HI TCCGGA 1 cut(s) 2105
AoxI GGCC 7 cut(s) 270, 310, 658, 1754, 1876, 3317, 3332
AseI ATTAAT 1 cut(s) 351
Asp700I GAANNNNTTC 1 cut(s) 3084
AspS9I GGNCC 1 cut(s) 271
AsuHPI GGTGA 6 cut(s) 887, 2044, 2285, 2360, 2617, 3276
AsuNHI GCTAGC 2 cut(s) 1897, 2470
AxyI CCTNAGG 1 cut(s) 3135
BaeGI GKGCMC 1 cut(s) 3619
BamHI GGATCC 1 cut(s) 3636
BanI GGYRCC 2 cut(s) 1237, 3616
BanII GRGCYC 1 cut(s) 3168
BauI CACGAG 1 cut(s) 2691
BbsI GAAGAC 2 cut(s) 402, 1772
Bbv12I GWGCWC 3 cut(s) 488, 970, 1294
BbvCI CCTCAGC 1 cut(s) 1191
BccI CCATC 3 cut(s) 1228, 3527, 3628
BceAI ACGGC 1 cut(s) 52
BciT130I CCWGG 5 cut(s) 14, 506, 975, 2310, 3055
BciVI GTATCC 2 cut(s) 1707, 2281
BcoDI GTCTC 6 cut(s) 1007, 1341, 1405, 1775, 2126, 2256
BcuI ACTAGT 1 cut(s) 3394
BfmI CTRYAG 4 cut(s) 1031, 1912, 1968, 2577
BfuI GTATCC 2 cut(s) 1707, 2281
BlpI GCTNAGC 1 cut(s) 3581
BmcAI AGTACT 2 cut(s) 176, 2713
Bme1390I CCNGG 5 cut(s) 14, 506, 975, 2310, 3055
BmgT120I GGNCC 1 cut(s) 271
BmiI GGNNCC 6 cut(s) 893, 908, 1239, 1684, 3618, 3638
BmrFI CCNGG 5 cut(s) 14, 506, 975, 2310, 3055
BmrI ACTGGG 1 cut(s) 210
BmsI GCATC 9 cut(s) 707, 850, 1262, 1909, 1951, 2161, 2620, 3013, 3594
BmtI GCTAGC 2 cut(s) 1901, 2474
BmuI ACTGGG 1 cut(s) 210
BpiI GAAGAC 2 cut(s) 402, 1772
BplI GAGNNNNNCTC 4 cut(s) 470, 502, 1279, 1311
BpmI CTGGAG 2 cut(s) 852, 3386
Bpu10I CCTNAGC 1 cut(s) 1191
Bpu1102I GCTNAGC 1 cut(s) 3581
BpuEI CTTGAG 7 cut(s) 472, 557, 1047, 1888, 2238, 3386, 3579
BsaBI GATNNNNATC 2 cut(s) 864, 1929
BsaI GGTCTC 5 cut(s) 1007, 1341, 1405, 1775, 2126
BsaJI CCNNGG 5 cut(s) 51, 2295, 2309, 2391, 3054
BsaWI WCCGGW 1 cut(s) 2105
BsaXI ACNNNNNCTCC 8 cut(s) 373, 403, 825, 855, 1338, 1368, 2899, 2929
Bsc4I CCNNNNNNNGG 8 cut(s) 1054, 1396, 2676, 2805, 2880, 3060, 3341, 3515
Bse1I ACTGG 4 cut(s) 216, 2275, 2502, 3115
Bse21I CCTNAGG 1 cut(s) 3135
Bse3DI GCAATG 1 cut(s) 1686
Bse8I GATNNNNATC 2 cut(s) 864, 1929
BseAI TCCGGA 1 cut(s) 2105
BseBI CCWGG 5 cut(s) 14, 506, 975, 2310, 3055
BseDI CCNNGG 5 cut(s) 51, 2295, 2309, 2391, 3054
BseGI GGATG 5 cut(s) 865, 1239, 1277, 3588, 3620
BseJI GATNNNNATC 2 cut(s) 864, 1929
BseLI CCNNNNNNNGG 8 cut(s) 1054, 1396, 2676, 2805, 2880, 3060, 3341, 3515
BseMI GCAATG 1 cut(s) 1686
BseNI ACTGG 4 cut(s) 216, 2275, 2502, 3115
BseRI GAGGAG 2 cut(s) 995, 1284
BseSI GKGCMC 1 cut(s) 3619
BseYI CCCAGC 1 cut(s) 284
BsgI GTGCAG 2 cut(s) 1974, 2829
Bsh1236I CGCG 1 cut(s) 1734
BshFI GGCC 7 cut(s) 272, 312, 660, 1756, 1878, 3319, 3334
BshNI GGYRCC 2 cut(s) 1237, 3616
BsiHKAI GWGCWC 3 cut(s) 488, 970, 1294
BsiSI CCGG 1 cut(s) 2106
BslFI GGGAC 4 cut(s) 1030, 1738, 2272, 3445
BslI CCNNNNNNNGG 8 cut(s) 1054, 1396, 2676, 2805, 2880, 3060, 3341, 3515
BsmAI GTCTC 6 cut(s) 1007, 1341, 1405, 1775, 2126, 2256
BsmFI GGGAC 4 cut(s) 1030, 1738, 2272, 3445
BsmI GAATGC 3 cut(s) 566, 2164, 2304
BsnI GGCC 7 cut(s) 272, 312, 660, 1756, 1878, 3319, 3334
Bso31I GGTCTC 5 cut(s) 1007, 1341, 1405, 1775, 2126
Bsp1286I GDGCHC 5 cut(s) 488, 970, 1294, 3168, 3619
Bsp13I TCCGGA 1 cut(s) 2105
Bsp143I GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
Bsp1720I GCTNAGC 1 cut(s) 3581
Bsp19I CCATGG 1 cut(s) 2295
Bsp68I TCGCGA 1 cut(s) 1734
BspACI CCGC 3 cut(s) 854, 2088, 2300
BspANI GGCC 7 cut(s) 272, 312, 660, 1756, 1878, 3319, 3334
BspEI TCCGGA 1 cut(s) 2105
BspFNI CGCG 1 cut(s) 1734
BspHI TCATGA 1 cut(s) 1987
BspLI GGNNCC 6 cut(s) 893, 908, 1239, 1684, 3618, 3638
BspMAI CTGCAG 1 cut(s) 2581
BspOI GCTAGC 2 cut(s) 1901, 2474
BspPI GGATC 9 cut(s) 1087, 1381, 1606, 1842, 1937, 2230, 3416, 3631, 3644
BspQI GCTCTTC 1 cut(s) 1331
BspT107I GGYRCC 2 cut(s) 1237, 3616
BspTNI GGTCTC 5 cut(s) 1007, 1341, 1405, 1775, 2126
BsrBI CCGCTC 1 cut(s) 2088
BsrDI GCAATG 1 cut(s) 1686
BsrI ACTGG 4 cut(s) 216, 2275, 2502, 3115
BssECI CCNNGG 5 cut(s) 51, 2295, 2309, 2391, 3054
BssMI GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
BssSI CACGAG 1 cut(s) 2691
BssT1I CCWWGG 3 cut(s) 51, 2295, 2391
Bst2BI CACGAG 1 cut(s) 2691
Bst2UI CCWGG 5 cut(s) 14, 506, 975, 2310, 3055
Bst4CI ACNGT 9 cut(s) 635, 1222, 1321, 1729, 2023, 2430, 2752, 2839, 3033
Bst6I CTCTTC 5 cut(s) 1128, 1331, 1431, 2241, 2328
BstAPI GCANNNNNTGC 3 cut(s) 590, 925, 1961
BstC8I GCNNGC 4 cut(s) 1632, 1899, 2302, 2472
BstDSI CCRYGG 1 cut(s) 2295
BstENI CCTNNNNNAGG 1 cut(s) 2878
BstF5I GGATG 5 cut(s) 865, 1239, 1277, 3588, 3620
BstFNI CGCG 1 cut(s) 1734
BstKTI GATC 9 cut(s) 1095, 1389, 1411, 1601, 1837, 1945, 2238, 3411, 3639
BstMAI GTCTC 6 cut(s) 1007, 1341, 1405, 1775, 2126, 2256
BstMBI GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
BstNI CCWGG 5 cut(s) 14, 506, 975, 2310, 3055
BstSCI CCNGG 5 cut(s) 12, 504, 973, 2308, 3053
BstSFI CTRYAG 4 cut(s) 1031, 1912, 1968, 2577
BstSLI GKGCMC 1 cut(s) 3619
BstUI CGCG 1 cut(s) 1734
BstV2I GAAGAC 2 cut(s) 402, 1772
BstX2I RGATCY 3 cut(s) 1092, 1834, 3636
BstXI CCANNNNNNTGG 1 cut(s) 3330
BstYI RGATCY 3 cut(s) 1092, 1834, 3636
Bsu36I CCTNAGG 1 cut(s) 3135
BsuI GTATCC 2 cut(s) 1707, 2281
BsuRI GGCC 7 cut(s) 272, 312, 660, 1756, 1878, 3319, 3334
BtgI CCRYGG 1 cut(s) 2295
BtsCI GGATG 5 cut(s) 865, 1239, 1277, 3588, 3620
BtsI GCAGTG 4 cut(s) 153, 591, 2526, 3520
BtuMI TCGCGA 1 cut(s) 1734
Cac8I GCNNGC 4 cut(s) 1632, 1899, 2302, 2472
CaiI CAGNNNCTG 1 cut(s) 2155
CciI TCATGA 1 cut(s) 1987
Cfr13I GGNCC 1 cut(s) 271
CseI GACGC 1 cut(s) 1028
CsiI ACCWGGT 2 cut(s) 12, 504
Csp6I GTAC 7 cut(s) 78, 175, 1028, 1202, 1568, 2712, 3474
CviQI GTAC 7 cut(s) 78, 175, 1028, 1202, 1568, 2712, 3474
DpnI GATC 9 cut(s) 1094, 1388, 1410, 1600, 1836, 1944, 2237, 3410, 3638
DpnII GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
DraI TTTAAA 2 cut(s) 2641, 2974
DraIII CACNNNGTG 1 cut(s) 2546
Eam1104I CTCTTC 5 cut(s) 1128, 1331, 1431, 2241, 2328
EarI CTCTTC 5 cut(s) 1128, 1331, 1431, 2241, 2328
Eco130I CCWWGG 3 cut(s) 51, 2295, 2391
Eco147I AGGCCT 1 cut(s) 660
Eco24I GRGCYC 1 cut(s) 3168
Eco31I GGTCTC 5 cut(s) 1007, 1341, 1405, 1775, 2126
Eco32I GATATC 2 cut(s) 1927, 3544
Eco57I CTGAAG 6 cut(s) 438, 675, 815, 1239, 2301, 3135
Eco81I CCTNAGG 1 cut(s) 3135
EcoNI CCTNNNNNAGG 1 cut(s) 2878
EcoRI GAATTC 2 cut(s) 1477, 3385
EcoRII CCWGG 5 cut(s) 12, 504, 973, 2308, 3053
EcoRV GATATC 2 cut(s) 1927, 3544
EcoT14I CCWWGG 3 cut(s) 51, 2295, 2391
EcoT22I ATGCAT 3 cut(s) 6, 460, 1277
EcoT38I GRGCYC 1 cut(s) 3168
ErhI CCWWGG 3 cut(s) 51, 2295, 2391
FaqI GGGAC 4 cut(s) 1030, 1738, 2272, 3445
FauI CCCGC 1 cut(s) 2293
FauNDI CATATG 1 cut(s) 2586
FokI GGATG 5 cut(s) 872, 1246, 1284, 3575, 3607
FriOI GRGCYC 1 cut(s) 3168
GsaI CCCAGC 1 cut(s) 288
GsuI CTGGAG 2 cut(s) 852, 3386
HaeIII GGCC 7 cut(s) 272, 312, 660, 1756, 1878, 3319, 3334
HapII CCGG 1 cut(s) 2106
HgaI GACGC 1 cut(s) 1028
HincII GTYRAC 3 cut(s) 61, 2983, 3016
HindII GTYRAC 3 cut(s) 61, 2983, 3016
HindIII AAGCTT 3 cut(s) 797, 1791, 2598
HpaII CCGG 1 cut(s) 2106
HphI GGTGA 6 cut(s) 887, 2044, 2285, 2360, 2617, 3276
Hpy166II GTNNAC 9 cut(s) 61, 532, 844, 1204, 2524, 2748, 2983, 3016, 3476
Hpy8I GTNNAC 9 cut(s) 61, 532, 844, 1204, 2524, 2748, 2983, 3016, 3476
Hpy99I CGWCG 1 cut(s) 2999
HpyCH4III ACNGT 9 cut(s) 635, 1222, 1321, 1729, 2023, 2430, 2752, 2839, 3033
HpyCH4IV ACGT 1 cut(s) 2853
HpySE526I ACGT 1 cut(s) 2853
Kpn2I TCCGGA 1 cut(s) 2105
Kzo9I GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
LguI GCTCTTC 1 cut(s) 1331
LmnI GCTCC 6 cut(s) 394, 906, 1297, 1576, 2650, 2920
LweI GCATC 9 cut(s) 707, 850, 1262, 1909, 1951, 2161, 2620, 3013, 3594
MabI ACCWGGT 2 cut(s) 12, 504
MaeII ACGT 1 cut(s) 2853
MaeIII GTNAC 5 cut(s) 218, 623, 2032, 2176, 2956
MalI GATC 9 cut(s) 1094, 1388, 1410, 1600, 1836, 1944, 2237, 3410, 3638
MbiI CCGCTC 1 cut(s) 2088
MboI GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
MflI RGATCY 3 cut(s) 1092, 1834, 3636
MhlI GDGCHC 5 cut(s) 488, 970, 1294, 3168, 3619
MlyI GAGTC 5 cut(s) 740, 2029, 2258, 2657, 3208
MmeI TCCRAC 1 cut(s) 3430
Mph1103I ATGCAT 3 cut(s) 6, 460, 1277
MroI TCCGGA 1 cut(s) 2105
MroXI GAANNNNTTC 1 cut(s) 3084
MslI CAYNNNNRTG 4 cut(s) 854, 1992, 2169, 3045
MspA1I CMGCKG 6 cut(s) 284, 793, 830, 1518, 1973, 2936
MspI CCGG 1 cut(s) 2106
MspR9I CCNGG 5 cut(s) 14, 506, 975, 2310, 3055
Mva1269I GAATGC 3 cut(s) 566, 2164, 2304
MvaI CCWGG 5 cut(s) 14, 506, 975, 2310, 3055
MvnI CGCG 1 cut(s) 1734
NcoI CCATGG 1 cut(s) 2295
NdeI CATATG 1 cut(s) 2586
NdeII GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
NheI GCTAGC 2 cut(s) 1897, 2470
NlaIV GGNNCC 6 cut(s) 893, 908, 1239, 1684, 3618, 3638
NmeAIII GCCGAG 1 cut(s) 3534
NmuCI GTSAC 2 cut(s) 2032, 2956
NruI TCGCGA 1 cut(s) 1734
NsiI ATGCAT 3 cut(s) 6, 460, 1277
PagI TCATGA 1 cut(s) 1987
PceI AGGCCT 1 cut(s) 660
PciSI GCTCTTC 1 cut(s) 1331
PctI GAATGC 3 cut(s) 566, 2164, 2304
PdmI GAANNNNTTC 1 cut(s) 3084
PflFI GACNNNGTC 1 cut(s) 1352
PflMI CCANNNNNTGG 2 cut(s) 1054, 3060
PleI GAGTC 5 cut(s) 739, 2029, 2257, 2657, 3208
PpsI GAGTC 5 cut(s) 739, 2029, 2257, 2657, 3208
PshBI ATTAAT 1 cut(s) 351
Psp6I CCWGG 5 cut(s) 12, 504, 973, 2308, 3053
PspFI CCCAGC 1 cut(s) 284
PspGI CCWGG 5 cut(s) 12, 504, 973, 2308, 3053
PspN4I GGNNCC 6 cut(s) 893, 908, 1239, 1684, 3618, 3638
PspPI GGNCC 1 cut(s) 271
PstI CTGCAG 1 cut(s) 2581
PstNI CAGNNNCTG 1 cut(s) 2155
PsuI RGATCY 3 cut(s) 1092, 1834, 3636
PsyI GACNNNGTC 1 cut(s) 1352
PvuII CAGCTG 6 cut(s) 284, 793, 830, 1518, 1973, 2936
RruI TCGCGA 1 cut(s) 1734
RsaI GTAC 7 cut(s) 79, 176, 1029, 1203, 1569, 2713, 3475
RsaNI GTAC 7 cut(s) 78, 175, 1028, 1202, 1568, 2712, 3474
RseI CAYNNNNRTG 4 cut(s) 854, 1992, 2169, 3045
SapI GCTCTTC 1 cut(s) 1331
Sau3AI GATC 9 cut(s) 1092, 1386, 1408, 1598, 1834, 1942, 2235, 3408, 3636
Sau96I GGNCC 1 cut(s) 271
ScaI AGTACT 2 cut(s) 176, 2713
SchI GAGTC 5 cut(s) 740, 2029, 2258, 2657, 3208
ScrFI CCNGG 5 cut(s) 14, 506, 975, 2310, 3055
SduI GDGCHC 5 cut(s) 488, 970, 1294, 3168, 3619
SexAI ACCWGGT 2 cut(s) 12, 504
SfaNI GCATC 9 cut(s) 707, 850, 1262, 1909, 1951, 2161, 2620, 3013, 3594
SfcI CTRYAG 4 cut(s) 1031, 1912, 1968, 2577
SmiMI CAYNNNNRTG 4 cut(s) 854, 1992, 2169, 3045
SmlI CTYRAG 7 cut(s) 487, 572, 1062, 1867, 2253, 3401, 3594
SmoI CTYRAG 7 cut(s) 487, 572, 1062, 1867, 2253, 3401, 3594
SpeI ACTAGT 1 cut(s) 3394
SseBI AGGCCT 1 cut(s) 660
SsiI CCGC 3 cut(s) 854, 2088, 2300
SspI AATATT 2 cut(s) 158, 3069
StuI AGGCCT 1 cut(s) 660
StyD4I CCNGG 5 cut(s) 12, 504, 973, 2308, 3053
StyI CCWWGG 3 cut(s) 51, 2295, 2391
TaaI ACNGT 9 cut(s) 635, 1222, 1321, 1729, 2023, 2430, 2752, 2839, 3033
TaiI ACGT 1 cut(s) 2856
TaqI TCGA 5 cut(s) 228, 784, 868, 1151, 2994
TatI WGTACW 6 cut(s) 77, 174, 1201, 1567, 2711, 3473
TseFI GTSAC 2 cut(s) 2032, 2956
Tsp45I GTSAC 2 cut(s) 2032, 2956
TspGWI ACGGA 1 cut(s) 2788
Tth111I GACNNNGTC 1 cut(s) 1352
Van91I CCANNNNNTGG 2 cut(s) 1054, 3060
VspI ATTAAT 1 cut(s) 351
XagI CCTNNNNNAGG 1 cut(s) 2878
XbaI TCTAGA 2 cut(s) 2603, 2716
XcmI CCANNNNNNNNNTGG 2 cut(s) 281, 3327
XmnI GAANNNNTTC 1 cut(s) 3084
ZrmI AGTACT 2 cut(s) 176, 2713
Zsp2I ATGCAT 3 cut(s) 6, 460, 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.