Rh2DG447100

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
64890484 .. 64891930
1447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG447100.1

Sequence Viewer

Length: 270 bp
ATGCAGATTTCACCGGAGCCTCCAGCAATTGTGGAGGACAAGAGGCCCCCATATTCATGGCCTCAAAAGGGTAGAATAGAGCTTTTTTCACTGAAGGCTCTAGAGAAGTGTCAATTACAGGCAACAGTCAATAGCCTACCCAATTTACTAGATTCATCTGGAAAGCTGGTGGAGTATGAAGAACCTTCAAAGCTCTTGGATACCAACTCCTACTTCTCCAAACTTGTAGCTGAATATTGGTCAAGCTGCAATACAAAGTTACAAAACTGA

Protein Analysis

89

Amino Acids

10.13

Weight (kDa)

5.36

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 113
AfiI CCNNNNNNNGG 1 cut(s) 68
AgsI TTSAA 1 cut(s) 189
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AluBI AGCT 5 cut(s) 82, 166, 193, 230, 246
AluI AGCT 5 cut(s) 82, 166, 193, 230, 246
AoxI GGCC 2 cut(s) 44, 59
ApeKI GCWGC 1 cut(s) 246
AspS9I GGNCC 1 cut(s) 45
AsuHPI GGTGA 1 cut(s) 3
BbvI GCAGC 1 cut(s) 233
BciVI GTATCC 1 cut(s) 193
BfaI CTAG 2 cut(s) 101, 149
BfuI GTATCC 1 cut(s) 193
BisI GCNGC 1 cut(s) 247
BlsI GCNGC 1 cut(s) 248
BmgT120I GGNCC 1 cut(s) 45
BmiI GGNNCC 2 cut(s) 18, 47
BpmI CTGGAG 1 cut(s) 6
BsaWI WCCGGW 1 cut(s) 13
Bsc4I CCNNNNNNNGG 1 cut(s) 68
BseLI CCNNNNNNNGG 1 cut(s) 68
BseXI GCAGC 1 cut(s) 233
BshFI GGCC 2 cut(s) 46, 61
BsiSI CCGG 1 cut(s) 14
BslI CCNNNNNNNGG 1 cut(s) 68
BsnI GGCC 2 cut(s) 46, 61
BspANI GGCC 2 cut(s) 46, 61
BspLI GGNNCC 2 cut(s) 18, 47
Bst4CI ACNGT 1 cut(s) 127
BstV1I GCAGC 1 cut(s) 233
BstXI CCANNNNNNTGG 1 cut(s) 57
BsuI GTATCC 1 cut(s) 193
BsuRI GGCC 2 cut(s) 46, 61
BtsIMutI CAGTG 1 cut(s) 89
Cfr13I GGNCC 1 cut(s) 45
CviAII CATG 1 cut(s) 57
Eco57I CTGAAG 1 cut(s) 113
EcoO109I RGGNCCY 1 cut(s) 45
FaeI CATG 1 cut(s) 60
FaiI YATR 3 cut(s) 52, 58, 177
FatI CATG 1 cut(s) 56
Fnu4HI GCNGC 1 cut(s) 247
Fsp4HI GCNGC 1 cut(s) 247
FspBI CTAG 2 cut(s) 101, 149
GluI GCNGC 1 cut(s) 247
GsuI CTGGAG 1 cut(s) 6
HaeIII GGCC 2 cut(s) 46, 61
HapII CCGG 1 cut(s) 14
Hin1II CATG 1 cut(s) 60
HinfI GANTC 1 cut(s) 152
HpaII CCGG 1 cut(s) 14
HphI GGTGA 1 cut(s) 3
Hpy188III TCNNGA 2 cut(s) 101, 159
HpyAV CCTTC 2 cut(s) 88, 195
HpyCH4III ACNGT 1 cut(s) 127
HpyCH4V TGCA 2 cut(s) 4, 249
Hsp92II CATG 1 cut(s) 60
LmnI GCTCC 1 cut(s) 16
LpnPI CCDG 5 cut(s) 27, 36, 104, 144, 152
Lsp1109I GCAGC 1 cut(s) 233
MaeI CTAG 2 cut(s) 101, 149
MaeIII GTNAC 1 cut(s) 258
MboII GAAGA 1 cut(s) 191
MfeI CAATTG 1 cut(s) 27
MluCI AATT 3 cut(s) 27, 113, 142
MnlI CCTC 4 cut(s) 28, 30, 36, 72
MslI CAYNNNNRTG 1 cut(s) 55
MspI CCGG 1 cut(s) 14
MunI CAATTG 1 cut(s) 27
NlaIII CATG 1 cut(s) 60
NlaIV GGNNCC 2 cut(s) 18, 47
PfeI GAWTC 1 cut(s) 152
PkrI GCNGC 1 cut(s) 248
PspN4I GGNNCC 2 cut(s) 18, 47
PspPI GGNCC 1 cut(s) 45
RseI CAYNNNNRTG 1 cut(s) 55
SatI GCNGC 1 cut(s) 247
Sau96I GGNCC 1 cut(s) 45
SetI ASST 6 cut(s) 84, 168, 187, 195, 232, 248
SmiMI CAYNNNNRTG 1 cut(s) 55
Sse9I AATT 3 cut(s) 27, 113, 142
SspI AATATT 1 cut(s) 236
SspMI CTAG 2 cut(s) 101, 149
TaaI ACNGT 1 cut(s) 127
TasI AATT 3 cut(s) 27, 113, 142
TfiI GAWTC 1 cut(s) 152
TscAI CASTG 1 cut(s) 96
TseI GCWGC 1 cut(s) 246
TspDTI ATGAA 3 cut(s) 45, 144, 192
TspRI CASTG 1 cut(s) 96
XbaI TCTAGA 1 cut(s) 100
XspI CTAG 2 cut(s) 101, 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.