FvH4_6g33070

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
26130480 .. 26137621
7142 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g33070.t2

Sequence Viewer

Length: 4404 bp
ATGGCTTCCTTGAAGAGCTCTGTACTTGGGATCACAGCTCGGATTTGTGATGGGGAATTTTATCTGAGTTCTTACTGCACTCAAAGGACTCTAGTTAATGCAGTAAATCTTCTCTTCCTCTTCCTTTTTAGCTTATTTACACTTGTAGCTTCTGTAAGGAAGCATCATACTAGAAGTCCATCCAGAAGGAACAGATTCGCTGTAGTGGTTTCAGTCTGTTGTGCTCTTACTGGCATTGCCTACTTTGGTGCTGGACTGTGGATTCTGATGGCCAAAACTGATGATCTATCAAATTATTTCGAAAGCTGGTTGGATTACCTTATTAGAGGACTAGTTTGGATTTCCTTCACAATTTCCTTGCTTGTTCAAAGGTCTAAATGGATTAAAATTCTGAATTCTGTTTGGTGGGTGTCCTCCTTTTCCTTGGTCTCGGCTGTAAACACAGAAATACTTGTAAGAAGCCATAACATTCATATTTTCGATGTGTTGACATGGCCAGTGAGCTTCTTACTTGTACTGTGTGCTGTTAGAAACTTTAGCCACTTTGTTTATGATCAAAGCCAAGATAACAGCATATCAGAGCCTCTATTAGCCAATAAGTCTGCTGATAAGAGCCAGAAAACGCAACTAGGCAATGCCGGTTTCCTTAGCAAATTGACATTTGCTTGGATCAATCCTCTACTCACTTTAGGCTACTCAAAAACATTAGCTACTGAAGACATACCATCTCTGGTTTCAGAAGATGAAGCTGATTTAGCCTACCAAAAATTTGCTCAAGCATGGGAATCCCTGGCAAGGGAGAAGAGCTCAAGCAGTACCGGAAACCTGGTTATGAGAGCAATAGCGAAAGTTTACTTGAAAGAAAATATATGGATTGCCTTTTGTGCATTCCTCAGGACAATTGCAGTTGTAGTTTCTCCTCTTATACTCTATGCATTTGTAAATCATTCCAATGCCGAGGAGGAAAATTTGTCCCAAGGCCTCATCATAGTGGGGTGTCTGGTTATCACCAAAGTTGTCGAGTCTCTCACCCAGAGACATTGGTTTTTTGACTCAAGGAGGTCTGGAATGAGAATGAGGTCGGCTTTGATGGTCGCAGTTTATCAAAAGCAGCTGAAACTGTCTAGTGTTGGAAGGAGAAGGCACTCAGCTGGGGAGATAGTTAACTATATTGCAGTTGATGCTTACAGAATGGGAGAGTTCCCATGGTGGTTCCATTTAACTTGGACCTTTTCATTGCAATTAGTTCTAGCTATTGTAGTTCTTATTTGGGTGGTGGGTGTTGGTGCTCTACCGGGTTTAATTCCTCTCTTCATTTGTGGTCTCCTAAATGTGCCTTTTGCAAAGGTACTTCAGAAGTGTCAGTCCCAGTTCATGATAGCACAAGATGAGAGGCTTAGAGCCACTTCTGAGATCCTTAACAGTATGAAGATCATTAAGTTACAATCATGGGAAGAGAAGTTCAAAAACTCGGTTGTTTCCCTTCGAGAAAGGGAATTTAAATGGTTGTCTGAGGGACAGCTTAGAAAGGCTTATGGAACTTTACTCTACTGGATGTCACCAACAATTATCTCTTCAGTTGTTTTTCTGGGGTGTATCCTTTTCAAAAGTGTCCCTCTGAATGCAAGTACTATATTCACAGTTCTAGCTTCACTAAGGTCTATGGGAGAACCTGTGAGAATGATACCAGAATGCCTTTCAGCAATGATCCAAGTCAAGGTCTCATTTGATCGGCTGAAAGTATTTTTGCTTGATGATGAGTTGAAAGATGATGAGGTAAGAAACCTCCCATCACCGAATTCAGATGAGAGCTTAAGAATACAAAAAGGCATTTTCAGTTGGTACCCTGAATCAGCAATTCAAACTCTGAAAGAAGTGAATATAGAAGCCAAATGTGAGCAGAAAATTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCACTTTTATTTGCTATACTTGGAGAGATGCCTAAACTTTCAGGAACTGTTGATGTATTTGGAACCATAGCCTATGTTTCTCAGACTTCTTGGATACAAAGTGGGACAGTTCGTGATAACATACTCTATGGGAAGCCAATGGACAAGAACAAATATGAGAAGACTATAAAAGCTTGTGCTTTGGATAAGGACATAAATAGTTTTGATCATGGTGATCTTACTGAAATAGGCCAGAGGGGAATTAACATGAGTGGAGGTCAAAAGCAAAGGATTCAGCTGGCCCGAGCTGTCTATAGTGATGCTGATATCTACCTCCTAGATGATCCCTTCAGTGCAGTGGATGCGCACACTGGCGCGATTCTGTTTCACGATTGTGTCATGGATGCTCTAGCAAAGAAGACTGTGATTCTCGTGACTCATCAAGTTGAATTTCTGTCTGAAGTTGACAAAATTCTGGTAATGGAGGGTGGACAAATTACTCAATCCGGAAGCTATGAGAGTCTCTTGACTGCTGGAACAGCATTTGAGCAACTGGTGAATGCTCATAAGGATGCAGTAACTACTTTAGGTCCTTCAAATAATCAAAGCCAAGTAGAGGAAAATGGAGATATGATCCGGCAAGAGGAGCCTAATGTGACTAATCTCACTAAATACAGCAGTGAAGGGGATATTTGTGTGAATGCTGTACCCACAGTACAACTAACAGAAGATGAAGAAAAAACAATTGGTGATGTTGGATGGAAGCCCTTCTGGGATTACATTATTGTTTCCAAGGGAACACTTCTGCTAGCATTAGGCATAATGGGACAGGCTGGTTTTGTTTCTTTTCAGGCCGGTTCAACTTTTTGGCTGGCTCTCGCCATTCAAAATCCTTCTATAACTAGTCTTACCCTTGTCGGTGTCTATACTGCAATATCCACACTTAGTGCTGTGTTTGTCTATCTGAGGTCAACATTTGCAGCACATTTGGGACTGAGAGCTTCTAGAGCCTTTTTCGATGGTTTCACTGAGGCCATCTTTAAGGCTCCCATGTTATTCTTTGATTCAACTCCTGTTGGGAGGATTTTGACACGAGCTTCATCAGATTTAAGTATTGTGGATTTTGACATACCTTTCTCCATTATCTTTGTTGTGTCTGCTGGTATGGAATTGCTGACATGGATTGGAATAATGGCTTCTGTAACATGGCAAGTTCTAATTGTAGCCATTCTCACCATGGTTGCCTCAAAATATGTTCAGAGCTACTATCAAGCGTCTGCAAGGGAACTAATAAGAATCAATGGAACAACCAAAGCTCCTGTTATGAACTATGCAGCCGAGACATCACTTGGAGTGGTTACTATCAGAGCTTTTAAAATGGCTGACAGGTTCTTCCAAAACTACCTGGAGCTAGTTGACACAGATGCAAGACTGTTCTTTCATTCGAATGCAACAATGGAGTGGTTAATTATAAGAACAGAAGCACTTCAAAATCTGACTCTTTTTGTTGCTGCTTTTCTCCTTATTTCACTTCCTAAGGGTTATGTTCCTCCAGGGCTTGTAGGGCTGTCCCTTTCTTATGCATTGACACTAACAATGACACAAATATTTGTGATCCGGTGGTATTGTAACTTATCAAACTACATCATCTCAGTTGAAAGGATAAAACAGTTCATGCAGATTCCACCAGAGCCTCCGGCTATTATAGAGGACAAGAGACCACCATCATCATGGCCTACAAAGGGTAGGATAGAGCTGCATTCTCTCAAGATAAAATACCGTCCAAATGCTCCGCTAGTTTTGAAGGGAATTTCATGCACATTCAAAGAAGGGACTAGAGTAGGAGTTGTGGGAAGGACAGGAAGTGGAAAGACTACACTCATAAGTGCTTTGTTTCGTTTAGTAGAGCCTAACAGTGGTAAAATTATTATAGATGGACTTGACATCTGCTCTATGGGTCTAAAAGACTTGAGAATGAAGCTCAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGTAGCATCCGAACCAACTTGGATCCTCTCGGCCTTTACTCTGATGATGAAATATGGAGGGCTTTAGAGAAGTGTCAGCTGAAGGCAACAGTCAGGAACCTACCTAATCTGCTGGATTCAGCCGTTAGTGATGAAGGGGAAAATTGGAGCGCTGGGCAACGCCAGCTGTTTTGCCTTGGCCGAGTCCTTCTAAAGAGGAACAGAATTCTAGTTCTAGATGAGGCTACTGCTTCCATCGATTCTGCAACTGATGCCGTTCTACAAAGAACTATCAGGCAGGAATTTGCAGAATGCACAGTGATAACGGTTGCTCATAGAGTGCCAACTGTTATAGATAGTGACATGGTCATGGTCCTCTCCTACGGGAAGCTAGTGGAGTATGAAAAGCCTTCAAAGCTCTTGGATACCAACTCCTACTTCTCCAAGCTTGTAGCGGAATATTGGTCAAGCTGTAGAGGAGGAAACTGA

Protein Analysis

1468

Amino Acids

163.61

Weight (kDa)

8.3

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 21 - 179 7.6e-11 ABCC10 N-terminal domain
ABC_membrane PF00664 292 - 552 1.4e-23 ABC transporter transmembrane region
ABC_tran PF00005 623 - 757 2.2e-18 ABC transporter
ABC_membrane PF00664 937 - 1174 1.4e-24 ABC transporter transmembrane region
ABC_tran PF00005 1241 - 1389 2.6e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3392
Acc16I TGCGCA 1 cut(s) 2286
Acc65I GGTACC 1 cut(s) 1842
AccB1I GGYRCC 1 cut(s) 1842
AccII CGCG 1 cut(s) 2297
AccIII TCCGGA 1 cut(s) 2426
AciI CCGC 2 cut(s) 3713, 4370
AclWI GGATC 9 cut(s) 38, 677, 1408, 1702, 2258, 2548, 3529, 3953, 3966
AcoI YGGCCR 3 cut(s) 270, 494, 4114
AcuI CTGAAG 6 cut(s) 735, 1337, 1560, 2254, 2400, 4037
AdeI CACNNNGTG 1 cut(s) 2867
AfaI GTAC 8 cut(s) 24, 516, 817, 1350, 1630, 1844, 2628, 2637
AfeI AGCGCT 1 cut(s) 4087
AfiI CCNNNNNNNGG 7 cut(s) 795, 796, 1717, 2536, 2563, 3662, 3836
AflII CTTAAG 1 cut(s) 1813
AhlI ACTAGT 2 cut(s) 331, 2822
AjnI CCWGG 4 cut(s) 789, 825, 3324, 3472
AjuI GAANNNNNNNTTGG 4 cut(s) 2649, 2681, 4337, 4369
AleI CACNNNNGTG 1 cut(s) 2313
AloI GAACNNNNNNTCC 2 cut(s) 1445, 1477
Alw21I GWGCWC 4 cut(s) 20, 226, 809, 1291
Alw26I GTCTC 8 cut(s) 433, 1029, 1030, 1328, 1726, 2447, 3254, 3631
AlwI GGATC 9 cut(s) 38, 677, 1408, 1702, 2258, 2548, 3529, 3953, 3966
AlwNI CAGNNNCTG 1 cut(s) 1988
Ama87I CYCGRG 1 cut(s) 2223
Aor13HI TCCGGA 1 cut(s) 2426
Aor51HI AGCGCT 1 cut(s) 4087
ApeKI GCWGC 5 cut(s) 1111, 2900, 3254, 3431, 3676
Asp700I GAANNNNTTC 3 cut(s) 194, 2687, 3405
Asp718I GGTACC 1 cut(s) 1842
AspLEI GCGC 3 cut(s) 2287, 2297, 4088
AspS9I GGNCC 5 cut(s) 1227, 1919, 2221, 2510, 4288
AsuC2I CCSGG 1 cut(s) 1296
AsuHPI GGTGA 8 cut(s) 1000, 1021, 1551, 1785, 2165, 2488, 2681, 3145
AsuII TTCGAA 2 cut(s) 300, 3365
AsuNHI GCTAGC 1 cut(s) 2728
AvaI CYCGRG 1 cut(s) 2223
AvaII GGWCC 4 cut(s) 1227, 1919, 2510, 4288
AxyI CCTNAGG 2 cut(s) 893, 3456
BalI TGGCCA 2 cut(s) 272, 496
BamHI GGATCC 1 cut(s) 3958
BanI GGYRCC 1 cut(s) 1842
BanII GRGCYC 2 cut(s) 20, 809
BauI CACGAG 2 cut(s) 2351, 3012
BbsI GAAGAC 3 cut(s) 723, 2108, 2345
Bbv12I GWGCWC 4 cut(s) 20, 226, 809, 1291
BbvI GCAGC 5 cut(s) 1123, 2912, 3266, 3418, 3663
BceAI ACGGC 2 cut(s) 4043, 4175
BciT130I CCWGG 4 cut(s) 791, 827, 3326, 3474
BciVI GTATCC 3 cut(s) 1607, 2028, 4333
BclI TGATCA 2 cut(s) 553, 2146
BcnI CCSGG 1 cut(s) 1296
BcoDI GTCTC 8 cut(s) 433, 1029, 1030, 1328, 1726, 2447, 3254, 3631
BcuI ACTAGT 2 cut(s) 331, 2822
BfmI CTRYAG 3 cut(s) 201, 2233, 4387
BfoI RGCGCY 1 cut(s) 4089
BfrI CTTAAG 1 cut(s) 1813
BfuI GTATCC 3 cut(s) 1607, 2028, 4333
BisI GCNGC 5 cut(s) 1112, 2901, 3255, 3432, 3677
BlpI GCTNAGC 1 cut(s) 3902
BlsI GCNGC 5 cut(s) 1113, 2902, 3256, 3433, 3678
BmcAI AGTACT 1 cut(s) 1630
Bme1390I CCNGG 5 cut(s) 791, 827, 1296, 3326, 3474
Bme18I GGWCC 4 cut(s) 1227, 1919, 2510, 4288
BmeT110I CYCGRG 1 cut(s) 2223
BmgT120I GGNCC 5 cut(s) 1227, 1919, 2221, 2510, 4288
BmiI GGNNCC 7 cut(s) 1214, 1844, 2005, 2568, 2967, 3960, 4034
BmrFI CCNGG 5 cut(s) 791, 827, 1296, 3326, 3474
BmrI ACTGGG 1 cut(s) 1363
BmtI GCTAGC 1 cut(s) 2732
BmuI ACTGGG 1 cut(s) 1363
BpiI GAAGAC 3 cut(s) 723, 2108, 2345
BplI GAGNNNNNCTC 2 cut(s) 791, 823
BpmI CTGGAG 2 cut(s) 3347, 3456
Bpu10I CCTNAGC 1 cut(s) 647
Bpu1102I GCTNAGC 1 cut(s) 3902
Bpu14I TTCGAA 2 cut(s) 300, 3365
BpuEI CTTGAG 6 cut(s) 759, 793, 1039, 3671, 3900, 3910
BpuMI CCSGG 1 cut(s) 1296
Bsa29I ATCGAT 1 cut(s) 4173
BsaI GGTCTC 4 cut(s) 433, 1328, 1726, 3631
BsaJI CCNNGG 9 cut(s) 423, 789, 957, 976, 1205, 2712, 3156, 3473, 4111
BsaWI WCCGGW 3 cut(s) 818, 2426, 3537
BsaXI ACNNNNNCTCC 4 cut(s) 1659, 1689, 3220, 3250
Bsc4I CCNNNNNNNGG 7 cut(s) 795, 796, 1717, 2536, 2563, 3662, 3836
Bse118I RCCGGY 2 cut(s) 638, 2774
Bse1I ACTGG 7 cut(s) 235, 497, 1369, 1556, 1922, 2296, 2478
Bse21I CCTNAGG 2 cut(s) 893, 3456
Bse3DI GCAATG 4 cut(s) 234, 640, 1235, 1710
BseAI TCCGGA 1 cut(s) 2426
BseBI CCWGG 4 cut(s) 791, 827, 3326, 3474
BseCI ATCGAT 1 cut(s) 4173
BseDI CCNNGG 9 cut(s) 423, 789, 957, 976, 1205, 2712, 3156, 3473, 4111
BseGI GGATG 8 cut(s) 179, 1560, 2287, 2329, 2497, 2684, 3909, 3942
BseLI CCNNNNNNNGG 7 cut(s) 795, 796, 1717, 2536, 2563, 3662, 3836
BseMI GCAATG 4 cut(s) 234, 640, 1235, 1710
BseNI ACTGG 7 cut(s) 235, 497, 1369, 1556, 1922, 2296, 2478
BseRI GAGGAG 3 cut(s) 909, 974, 2579
BseXI GCAGC 5 cut(s) 1123, 2912, 3266, 3418, 3663
BseYI CCCAGC 2 cut(s) 1151, 4088
BsgI GTGCAG 2 cut(s) 61, 2295
Bsh1236I CGCG 1 cut(s) 2297
BshNI GGYRCC 1 cut(s) 1842
BshVI ATCGAT 1 cut(s) 4173
BsiHKAI GWGCWC 4 cut(s) 20, 226, 809, 1291
BsiHKCI CYCGRG 1 cut(s) 2223
BsiSI CCGG 8 cut(s) 639, 819, 1295, 2427, 2557, 2775, 3538, 3617
BslFI GGGAC 9 cut(s) 958, 1351, 1530, 1598, 2059, 2760, 2925, 3475, 3766
BslI CCNNNNNNNGG 7 cut(s) 795, 796, 1717, 2536, 2563, 3662, 3836
BsmAI GTCTC 8 cut(s) 433, 1029, 1030, 1328, 1726, 2447, 3254, 3631
BsmFI GGGAC 9 cut(s) 958, 1351, 1530, 1598, 2059, 2760, 2925, 3475, 3766
BsmI GAATGC 8 cut(s) 887, 1627, 1697, 2485, 2626, 3373, 3679, 4232
Bso31I GGTCTC 4 cut(s) 433, 1328, 1726, 3631
BsoBI CYCGRG 1 cut(s) 2223
Bsp119I TTCGAA 2 cut(s) 300, 3365
Bsp1286I GDGCHC 4 cut(s) 20, 226, 809, 1291
Bsp13I TCCGGA 1 cut(s) 2426
Bsp1720I GCTNAGC 1 cut(s) 3902
Bsp19I CCATGG 2 cut(s) 1205, 3156
BspACI CCGC 2 cut(s) 3713, 4370
BspDI ATCGAT 1 cut(s) 4173
BspEI TCCGGA 1 cut(s) 2426
BspFNI CGCG 1 cut(s) 2297
BspHI TCATGA 1 cut(s) 1374
BspLI GGNNCC 7 cut(s) 1214, 1844, 2005, 2568, 2967, 3960, 4034
BspOI GCTAGC 1 cut(s) 2732
BspPI GGATC 9 cut(s) 38, 677, 1408, 1702, 2258, 2548, 3529, 3953, 3966
BspQI GCTCTTC 2 cut(s) 8, 797
BspT104I TTCGAA 2 cut(s) 300, 3365
BspT107I GGYRCC 1 cut(s) 1842
BspTI CTTAAG 1 cut(s) 1813
BspTNI GGTCTC 4 cut(s) 433, 1328, 1726, 3631
BsrDI GCAATG 4 cut(s) 234, 640, 1235, 1710
BsrFI RCCGGY 2 cut(s) 638, 2774
BsrI ACTGG 7 cut(s) 235, 497, 1369, 1556, 1922, 2296, 2478
BssAI RCCGGY 2 cut(s) 638, 2774
BssECI CCNNGG 9 cut(s) 423, 789, 957, 976, 1205, 2712, 3156, 3473, 4111
BssSI CACGAG 2 cut(s) 2351, 3012
BssT1I CCWWGG 6 cut(s) 423, 976, 1205, 2712, 3156, 4111
Bst2BI CACGAG 2 cut(s) 2351, 3012
Bst2UI CCWGG 4 cut(s) 791, 827, 3326, 3474
Bst6I CTCTTC 7 cut(s) 8, 119, 125, 797, 1316, 1449, 1579
BstAFI CTTAAG 1 cut(s) 1813
BstAPI GCANNNNNTGC 3 cut(s) 1181, 2282, 4187
BstBI TTCGAA 2 cut(s) 300, 3365
BstC8I GCNNGC 4 cut(s) 2220, 2730, 2793, 4100
BstDSI CCRYGG 2 cut(s) 1205, 3156
BstF5I GGATG 8 cut(s) 179, 1560, 2287, 2329, 2497, 2684, 3909, 3942
BstFNI CGCG 1 cut(s) 2297
BstH2I RGCGCY 1 cut(s) 4089
BstHHI GCGC 3 cut(s) 2287, 2297, 4088
BstMAI GTCTC 8 cut(s) 433, 1029, 1030, 1328, 1726, 2447, 3254, 3631
BstNI CCWGG 4 cut(s) 791, 827, 3326, 3474
BstSCI CCNGG 5 cut(s) 789, 825, 1294, 3324, 3472
BstSFI CTRYAG 3 cut(s) 201, 2233, 4387
BstUI CGCG 1 cut(s) 2297
BstV1I GCAGC 5 cut(s) 1123, 2912, 3266, 3418, 3663
BstV2I GAAGAC 3 cut(s) 723, 2108, 2345
BstX2I RGATCY 2 cut(s) 1413, 3958
BstXI CCANNNNNNTGG 1 cut(s) 3651
BstYI RGATCY 2 cut(s) 1413, 3958
Bsu15I ATCGAT 1 cut(s) 4173
Bsu36I CCTNAGG 2 cut(s) 893, 3456
BsuI GTATCC 3 cut(s) 1607, 2028, 4333
BsuTUI ATCGAT 1 cut(s) 4173
BtgI CCRYGG 2 cut(s) 1205, 3156
BtsCI GGATG 8 cut(s) 179, 1560, 2287, 2329, 2497, 2684, 3909, 3942
BtsI GCAGTG 2 cut(s) 2283, 2605
BtsIMutI CAGTG 8 cut(s) 504, 2278, 2283, 2289, 2605, 2946, 3841, 4239
Cac8I GCNNGC 4 cut(s) 2220, 2730, 2793, 4100
CaiI CAGNNNCTG 1 cut(s) 1988
CciI TCATGA 1 cut(s) 1374
CfoI GCGC 3 cut(s) 2287, 2297, 4088
Cfr10I RCCGGY 2 cut(s) 638, 2774
Cfr13I GGNCC 5 cut(s) 1227, 1919, 2221, 2510, 4288
ClaI ATCGAT 1 cut(s) 4173
CseI GACGC 1 cut(s) 3183
CsiI ACCWGGT 1 cut(s) 825
Csp6I GTAC 8 cut(s) 23, 515, 816, 1349, 1629, 1843, 2627, 2636
CviQI GTAC 8 cut(s) 23, 515, 816, 1349, 1629, 1843, 2627, 2636
DraI TTTAAA 2 cut(s) 1501, 3295
DraIII CACNNNGTG 1 cut(s) 2867
EaeI YGGCCR 3 cut(s) 270, 494, 4114
Eam1104I CTCTTC 7 cut(s) 8, 119, 125, 797, 1316, 1449, 1579
EarI CTCTTC 7 cut(s) 8, 119, 125, 797, 1316, 1449, 1579
Ecl136II GAGCTC 2 cut(s) 18, 807
Eco130I CCWWGG 6 cut(s) 423, 976, 1205, 2712, 3156, 4111
Eco147I AGGCCT 1 cut(s) 981
Eco24I GRGCYC 2 cut(s) 20, 809
Eco31I GGTCTC 4 cut(s) 433, 1328, 1726, 3631
Eco32I GATATC 1 cut(s) 2248
Eco47I GGWCC 4 cut(s) 1227, 1919, 2510, 4288
Eco47III AGCGCT 1 cut(s) 4087
Eco53kI GAGCTC 2 cut(s) 18, 807
Eco57I CTGAAG 6 cut(s) 735, 1337, 1560, 2254, 2400, 4037
Eco81I CCTNAGG 2 cut(s) 893, 3456
Eco88I CYCGRG 1 cut(s) 2223
EcoICRI GAGCTC 2 cut(s) 18, 807
EcoO109I RGGNCCY 1 cut(s) 2510
EcoRI GAATTC 3 cut(s) 394, 1798, 4140
EcoRII CCWGG 4 cut(s) 789, 825, 3324, 3472
EcoRV GATATC 1 cut(s) 2248
EcoT14I CCWWGG 6 cut(s) 423, 976, 1205, 2712, 3156, 4111
EcoT22I ATGCAT 2 cut(s) 937, 3505
EcoT38I GRGCYC 2 cut(s) 20, 809
ErhI CCWWGG 6 cut(s) 423, 976, 1205, 2712, 3156, 4111
FaqI GGGAC 9 cut(s) 958, 1351, 1530, 1598, 2059, 2760, 2925, 3475, 3766
FbaI TGATCA 2 cut(s) 553, 2146
Fnu4HI GCNGC 5 cut(s) 1112, 2901, 3255, 3432, 3677
FokI GGATG 8 cut(s) 166, 1567, 2294, 2336, 2504, 2691, 3896, 3929
FriOI GRGCYC 2 cut(s) 20, 809
Fsp4HI GCNGC 5 cut(s) 1112, 2901, 3255, 3432, 3677
FspAI RTGCGCAY 1 cut(s) 2286
FspI TGCGCA 1 cut(s) 2286
GlaI GCGC 3 cut(s) 2286, 2296, 4087
GluI GCNGC 5 cut(s) 1112, 2901, 3255, 3432, 3677
GsaI CCCAGC 2 cut(s) 1155, 4092
GsuI CTGGAG 2 cut(s) 3347, 3456
HaeII RGCGCY 1 cut(s) 4089
HapII CCGG 8 cut(s) 639, 819, 1295, 2427, 2557, 2775, 3538, 3617
HgaI GACGC 1 cut(s) 3183
HhaI GCGC 3 cut(s) 2287, 2297, 4088
Hin6I GCGC 3 cut(s) 2285, 2295, 4086
HinP1I GCGC 3 cut(s) 2285, 2295, 4086
HincII GTYRAC 5 cut(s) 489, 1165, 2386, 2892, 3337
HindII GTYRAC 5 cut(s) 489, 1165, 2386, 2892, 3337
HindIII AAGCTT 2 cut(s) 2112, 4361
HpaI GTTAAC 1 cut(s) 1165
HpaII CCGG 8 cut(s) 639, 819, 1295, 2427, 2557, 2775, 3538, 3617
HphI GGTGA 8 cut(s) 1000, 1021, 1551, 1785, 2165, 2488, 2681, 3145
Hpy166II GTNNAC 9 cut(s) 439, 489, 853, 1165, 1919, 2386, 2411, 2892, 3337
Hpy8I GTNNAC 9 cut(s) 439, 489, 853, 1165, 1919, 2386, 2411, 2892, 3337
HspAI GCGC 3 cut(s) 2285, 2295, 4086
Kpn2I TCCGGA 1 cut(s) 2426
KpnI GGTACC 1 cut(s) 1846
Ksp22I TGATCA 2 cut(s) 553, 2146
KspAI GTTAAC 1 cut(s) 1165
LguI GCTCTTC 2 cut(s) 8, 797
LmnI GCTCC 7 cut(s) 1928, 2566, 2971, 3241, 3328, 3715, 4083
Lsp1109I GCAGC 5 cut(s) 1123, 2912, 3266, 3418, 3663
MabI ACCWGGT 1 cut(s) 825
MaeIII GTNAC 9 cut(s) 1440, 1557, 2353, 2497, 2575, 3121, 3277, 3548, 4274
MfeI CAATTG 2 cut(s) 900, 2664
MflI RGATCY 2 cut(s) 1413, 3958
MhlI GDGCHC 4 cut(s) 20, 226, 809, 1291
MlsI TGGCCA 2 cut(s) 272, 496
MluNI TGGCCA 2 cut(s) 272, 496
MlyI GAGTC 7 cut(s) 82, 1031, 1046, 2350, 2449, 3412, 4128
MmeI TCCRAC 4 cut(s) 291, 1111, 1906, 2656
Mox20I TGGCCA 2 cut(s) 272, 496
Mph1103I ATGCAT 2 cut(s) 937, 3505
MroI TCCGGA 1 cut(s) 2426
MroXI GAANNNNTTC 3 cut(s) 194, 2687, 3405
MscI TGGCCA 2 cut(s) 272, 496
MslI CAYNNNNRTG 7 cut(s) 951, 989, 2313, 2490, 3366, 3649, 4283
Msp20I TGGCCA 2 cut(s) 272, 496
MspA1I CMGCKG 5 cut(s) 1114, 1151, 2218, 4015, 4102
MspCI CTTAAG 1 cut(s) 1813
MspI CCGG 8 cut(s) 639, 819, 1295, 2427, 2557, 2775, 3538, 3617
MspR9I CCNGG 5 cut(s) 791, 827, 1296, 3326, 3474
MunI CAATTG 2 cut(s) 900, 2664
Mva1269I GAATGC 8 cut(s) 887, 1627, 1697, 2485, 2626, 3373, 3679, 4232
MvaI CCWGG 4 cut(s) 791, 827, 3326, 3474
MvnI CGCG 1 cut(s) 2297
NciI CCSGG 1 cut(s) 1296
NcoI CCATGG 2 cut(s) 1205, 3156
NheI GCTAGC 1 cut(s) 2728
NlaIV GGNNCC 7 cut(s) 1214, 1844, 2005, 2568, 2967, 3960, 4034
NmeAIII GCCGAG 5 cut(s) 410, 982, 3283, 3945, 4142
NmuCI GTSAC 4 cut(s) 1557, 2353, 2575, 4274
NsbI TGCGCA 1 cut(s) 2286
NsiI ATGCAT 2 cut(s) 937, 3505
NspV TTCGAA 2 cut(s) 300, 3365
OliI CACNNNNGTG 1 cut(s) 2313
PagI TCATGA 1 cut(s) 1374
PceI AGGCCT 1 cut(s) 981
PciSI GCTCTTC 2 cut(s) 8, 797
PctI GAATGC 8 cut(s) 887, 1627, 1697, 2485, 2626, 3373, 3679, 4232
PdmI GAANNNNTTC 3 cut(s) 194, 2687, 3405
PflFI GACNNNGTC 1 cut(s) 4280
PkrI GCNGC 5 cut(s) 1113, 2902, 3256, 3433, 3678
PleI GAGTC 7 cut(s) 82, 1030, 1046, 2350, 2448, 3412, 4127
PpsI GAGTC 7 cut(s) 82, 1030, 1046, 2350, 2448, 3412, 4127
PpuMI RGGWCCY 1 cut(s) 2510
PsiI TTATAA 1 cut(s) 3392
Psp124BI GAGCTC 2 cut(s) 20, 809
Psp5II RGGWCCY 1 cut(s) 2510
Psp6I CCWGG 4 cut(s) 789, 825, 3324, 3472
PspFI CCCAGC 2 cut(s) 1151, 4088
PspGI CCWGG 4 cut(s) 789, 825, 3324, 3472
PspN4I GGNNCC 7 cut(s) 1214, 1844, 2005, 2568, 2967, 3960, 4034
PspPI GGNCC 5 cut(s) 1227, 1919, 2221, 2510, 4288
PspPPI RGGWCCY 1 cut(s) 2510
PstNI CAGNNNCTG 1 cut(s) 1988
PsuI RGATCY 2 cut(s) 1413, 3958
PsyI GACNNNGTC 1 cut(s) 4280
PvuII CAGCTG 5 cut(s) 1114, 1151, 2218, 4015, 4102
RsaI GTAC 8 cut(s) 24, 516, 817, 1350, 1630, 1844, 2628, 2637
RsaNI GTAC 8 cut(s) 23, 515, 816, 1349, 1629, 1843, 2627, 2636
RseI CAYNNNNRTG 7 cut(s) 951, 989, 2313, 2490, 3366, 3649, 4283
SacI GAGCTC 2 cut(s) 20, 809
SapI GCTCTTC 2 cut(s) 8, 797
SatI GCNGC 5 cut(s) 1112, 2901, 3255, 3432, 3677
Sau96I GGNCC 5 cut(s) 1227, 1919, 2221, 2510, 4288
ScaI AGTACT 1 cut(s) 1630
SchI GAGTC 7 cut(s) 82, 1031, 1046, 2350, 2449, 3412, 4128
ScrFI CCNGG 5 cut(s) 791, 827, 1296, 3326, 3474
SduI GDGCHC 4 cut(s) 20, 226, 809, 1291
SexAI ACCWGGT 1 cut(s) 825
SfcI CTRYAG 3 cut(s) 201, 2233, 4387
SfuI TTCGAA 2 cut(s) 300, 3365
SinI GGWCC 4 cut(s) 1227, 1919, 2510, 4288
SmiI ATTTAAAT 1 cut(s) 1501
SmiMI CAYNNNNRTG 7 cut(s) 951, 989, 2313, 2490, 3366, 3649, 4283
SmlI CTYRAG 7 cut(s) 774, 808, 1054, 1813, 3686, 3889, 3915
SmoI CTYRAG 7 cut(s) 774, 808, 1054, 1813, 3686, 3889, 3915
SpeI ACTAGT 2 cut(s) 331, 2822
SseBI AGGCCT 1 cut(s) 981
SsiI CCGC 2 cut(s) 3713, 4370
SspI AATATT 2 cut(s) 3528, 4376
SstI GAGCTC 2 cut(s) 20, 809
StuI AGGCCT 1 cut(s) 981
StyD4I CCNGG 5 cut(s) 789, 825, 1294, 3324, 3472
StyI CCWWGG 6 cut(s) 423, 976, 1205, 2712, 3156, 4111
SwaI ATTTAAAT 1 cut(s) 1501
TaqI TCGA 7 cut(s) 300, 480, 1020, 1486, 2937, 3365, 4173
TatI WGTACW 4 cut(s) 22, 514, 1628, 2635
TscAI CASTG 8 cut(s) 504, 2278, 2283, 2296, 2605, 2953, 3841, 4239
TseFI GTSAC 4 cut(s) 1557, 2353, 2575, 4274
TseI GCWGC 5 cut(s) 1111, 2900, 3254, 3431, 3676
Tsp45I GTSAC 4 cut(s) 1557, 2353, 2575, 4274
TspRI CASTG 8 cut(s) 504, 2278, 2283, 2296, 2605, 2953, 3841, 4239
Tth111I GACNNNGTC 1 cut(s) 4280
Vha464I CTTAAG 1 cut(s) 1813
VpaK11BI GGWCC 4 cut(s) 1227, 1919, 2510, 4288
XbaI TCTAGA 2 cut(s) 2924, 4150
XcmI CCANNNNNNNNNTGG 2 cut(s) 3154, 3648
XmnI GAANNNNTTC 3 cut(s) 194, 2687, 3405
ZrmI AGTACT 1 cut(s) 1630
Zsp2I ATGCAT 2 cut(s) 937, 3505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.