Rh2AG428000

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
63567282 .. 63575089
7808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG428000.1

Sequence Viewer

Length: 4398 bp
ATGCACTTGATTCATACAGCTGTGTACAGTATGATTGATTTAGATTTTTTCCCTTGCCATGGACCATATGCAGGGATCACTTCTCAGATTTGTGATGGAGAATTTGATCTTGGTTCTTACTGCACTCAAAGGACTATGATAAATGCAGTAAATCTTCTCTTCCTCTTTCTTTTTTGCTTATTTACTCTTATAGCTTCTATAAGGAAGCATTATAGTAGTAGTAGTCCATCCAGAAGGGATAGATTCTCAGTAGTGGTTTCAGTCTGTTGTGCTCTTACTGGTATTGCCTATTTTGGTGCTGGATTGTGGATTCTGATAGCCAATAATGATGATCTATCAAATTTTTTTGAAAGCTGGTTGGATTATCTTGTTAGAGGACTAGTTTGGATTTCCTTCACAATTTCCTTGCTTGTTCAAAGGTCTAAATGGATCAAAATTCTGAACTCTGTTTGGTGGGTGTCCTCCTTTTCATTGGTCTCGGCTGTAAACATAGAAATACTAACAAGAACCCATAGCATTCGTATTTTTGATGTGCTGACATGGCCAGTGAGCTTCTTACTTCTATTGTGTGCTGTTAGAAACCTCAGCCACTTTGTTCATGACCAAAGCCAAGAAAATAGCATATCAGAGCCTCTATTAGCCAAAAAGTCTGCTGAAAAGAGCCAGAAAACACAACTAGGCAATGCCGGTTTCCTTAGCAAATTGACATTTTCTTGGATCAATCCTTTACTCACTTTAGGCTACTCAAAAACATTAGCTCCTGAAGACATACCATATCTGGTTTCAGAAGATGAAGCAGATTTAGCATACCAAAAATTTGCTCAAGCATGGGAGTCCCTGTCAAGGGATAAGAGCTCAAGCAGTACCAGAAACCTGGTTATGAGAGCAATAGCAAAAGTTTACTTGAAAGAGAATATATGGATTGCCTTTTGTGCATTCCTCAGGACAATTGCAGTTGTAGTTTCTCCTCTTATACTCTATGCATTTGTAAATTATTCCAATGCCGAGGAGGAAAATTTTTCCCAAGGCCTCATCATAGTGGGGTGCCTAATTATCACCAAAGTAGTCGAGTCTTTCACCCAGAGACATTGGTTCTTTGACTCAAGGAGGTCTGGAATGAGAATGAGGTCGGCTTTGATGGTCGCAGTTTATCAAAAGCAGCTGAAACTCTCTAGTGTGGGAAGGAGAAGGCACTCAGCTGGGGAGATAGTTAACTATATAGCAGTTGATGCTTACAGAATGGGAGAGTTCCCATGGTGGTTCCATTCAACATGGAGCTTTGCATTGCAATTACTTCTTGCCATTGGAGTTCTTTTCAGGGTGGTGGGGGTTGGTGCTCTACCGGGTTTAATTCCTCTATTCATTTGTGGTCTTCTAAATGTGCCTTTTGCAAAGGCACTTCAGAAGTGTCAGTCCCAGTTCATGATAGCACAAGATGAGAGGCTTAGAGCCACTTCTGAGATCCTAAACAGTATGAAGATCATTAAGTTACAATCCTGGGAAGAGAAATTCAAAAACTCTGTCAATTCCCTTCGAGAAAGAGAATTCAAATGGTTGTCTGAGGGACAATTTAGAAAGGCTTATGGAACTTTACTCTACTGGATGTCACCAACCATTATCTCTTCTGTTGTTTTTCTAGGGTGTATCCTTTTCAAAAGTGTCCCTCTGAATGCAAGTACTATATTCACAGTTTTAGCTTCACTAAGGAGCATGGGAGAACCTGTGAGAATGATACCAGAGGCTCTTTCAGTAATGATCCAAGTCAAGGTCTCATTTGATCGGCTAAATGATTTTTTGCTTGATGATGAGTTGAAAGATGATGAGATAAGGAAGCTTCCATCACCAAATTCAGATGAGAGCTTGAGAATACAAAAAGGCATTTTCAGTTGGTATCCTGAATCAGCAATTCAAACTCTGAAAGAAATGAACCTAGAAGCAAAATGTGAGCAGAAAATTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCACTTTTATTTGCTATACTTGGAGAGATGCCCAAAATTTCAGGAACTGTCGATGTATTTGGAACCATAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCGTGATAACATACTCTATGGGAAGCCAATGGACAAGAACAAATATGAGAAGACTATAAAAGCTTGTGCTTTGGATAAGGACATAAATAGTTTTGATCATGGTGATCTTACTGAAATAGGCCAGAGGGGAATTAACATGAGTGGAGGGCAAAAGCAAAGGATTCAGCTGGCCCGAGCTGTCTATAGTGATGCTGATATCTACCTCCTAGATGACCCATTCAGTGCAGTAGATGCACACACTGCCGCAATTCTGTTTCACGATTGTGTCATGGATGCTCTAGCAAAGAAGACTGTGATTCTCGTGACTCATCAAGTCGAATTTCTGTCAGAAGTTGACAAAATTCTGGTAATGGAGCGAGGACAAGTTACTCAATCCGGAAGCTATGAGAGTCTCTTGACTGCTGGAACAGCATTTGAGCAACTGGTGAATGCTCATAGAGATGCAGTAACTACATTAGGTCCTTCGAATAATCAAAGCCAAGTAGAACCGGAAAAGACAGATATGATCCAGCATGAGGAGTCTGTAACTAATCTCACTAGATACAGCAGTGAAGGGGACACTTCTGTGAAGGCTTCACCCACAGTGCAACTAACAGAAGATGAAGAAAAAGAGATTGGTGATGTTGGATGGAAGCCCTTCTGGGATTACATTTTTGTTTCCAAGGGAACACTTCTGCTAGCAATAGGCATAATGGCACAGGCTGGTTTTGTTTGTTTTCAGGCTGGTTCAACTTATTGGCTGGCTCTCGCCATTCAAAATCCTAGTATAACTAGTCTTACACTTGTCGGTGTCTATACTGCAATCTCAACACTCAGTGCTGTATTTGTCTATCTGAGGTCAACCTTTGCAGTACATCTGGGACTAAGAGCTTCTAGAACATTTTTTGATGGTTTCACAGATGCCATCTTTAAGGCTCCCATGTTGTTCTTTGACTCAACTCCTGTTGGGAGGATTTTGACACGAGCTTCATCAGATTTAAGTATCTTGGATTTTGACATACCTTTCTCCATTATCTTTGTTGTGTCTGCTGGTATGGAATTGCTGACATGGATTGGAATAATGGCTTCTGTCACATGGCAAGTTCTCATTGTAGCCGTTCTCACCATGGTTGCTTCAAAATATGTTCAGAGCTACTATCAAGCGTCTGCAAGGGAACTAATAAGAATCAATGGAACAACCAAAGCTCCTGTTATGAATTATGCAGCCGAGACATCACTTGGAGTGGTCACTATCAGAGCTTTTAAAATGGCTGACACGTTCTTCCAAAAGTACCTAGAGCTAGTTGACACAGATGCAAGACTGTTCTTTCATTCGAATGCAACAATGGAGTGGTTAATTATAAGAACAGAAGCACTTCAAAATGTGACTCTTTTTGTTGCTGCTTTTCTCCTTATTTCACTTCCCAAGGGTTATGTTGCTCCAGGGCTTGTGGGGCTTTCTCTTTCTTATGCTTTGACACTAACAATGACACAAATTTTTGTGATCCGGTGGTATTGTAACTTATCAAACTACATCATCTCAGTTGAAAGGATAAAACAGTTCATGCAGATTCCACCAGAGCCTCTGGCTATTGTGGAGGACAAGAGACCACCATCTTCATGGCCTACAAAGGGTAGGATAGAGCTGCATTCTCTCAAGATAAAATATCGTCCAAATGCTCCACTGGTTCTCAAGGGAATTTCATGCACATTCAAAGAAGGGACTAGAGTAGGAGTTGTGGGAAGGACAGGAAGCGGAAAGACTACACTTATAAGTGCTTTGTTTCGGTTAGTAGAGCCAAACAGCGGTAAAATTATCATAGATGGACTTGACATCTGCTCTATGGGTCTAAAGGATTTAAGAATGAAGCTCAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGTAGCATCAGAACCAACTTGGATCCTCTTGGTCTTTACTCCGATGATGAAATATGGAGGGCTCTAGAGAAGTGTCAGCTGAAGGCAACAGTCAGCAGTCTACCTAATCTGCTAGATTCATCTGTTAGTGATGAAGGGGAAAATTGGAGTGCTGGGCAACGCCAGCTGTTTTGCCTTGGCAGAGTCCTTCTGAAGAGGAACAGAATCCTAGTGCTAGATGAGGCTACTGCTTCCATCGATTCTGCAACAGACGCCGTTCTACAAAGAATCATCAGGCAGGAATTTGCAGAATGCACAGTGATAACGGTTGCTCATAGGGTTCCAACAGTTATAGATAGTGACATGGTCATGGTCCTCTCCTATGGTATGATTCTACATTCCAGTTATATCTTTATCTTATTTCGATCAACTTAA

Protein Analysis

1465

Amino Acids

163.92

Weight (kDa)

7.69

Isoelectric Point (pI)

35.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 39 - 195 8.3e-12 ABCC10 N-terminal domain
ABC_membrane PF00664 308 - 568 6.5e-22 ABC transporter transmembrane region
ABC_tran PF00005 639 - 773 4.9e-19 ABC transporter
ABC_membrane PF00664 945 - 1190 1.6e-24 ABC transporter transmembrane region
ABC_tran PF00005 1257 - 1405 2.7e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3440, 3851
AccB1I GGYRCC 1 cut(s) 1044
AccI GTMKAC 1 cut(s) 4084
AccIII TCCGGA 1 cut(s) 2474
AciI CCGC 3 cut(s) 2343, 3834, 3885
AclWI GGATC 9 cut(s) 83, 437, 725, 1456, 1750, 2599, 3577, 4001, 4014
AcoI YGGCCR 1 cut(s) 542
AcuI CTGAAG 4 cut(s) 783, 1385, 4085, 4196
AcyI GRCGYC 1 cut(s) 4236
AdeI CACNNNGTG 1 cut(s) 2915
AfaI GTAC 5 cut(s) 26, 865, 1678, 2952, 3371
AfiI CCNNNNNNNGG 8 cut(s) 59, 71, 843, 844, 1765, 2614, 3710, 3884
AflIII ACRYGT 1 cut(s) 3354
AhlI ACTAGT 2 cut(s) 379, 2870
AjnI CCWGG 3 cut(s) 873, 1496, 3520
AjuI GAANNNNNNNTTGG 4 cut(s) 93, 125, 2697, 2729
AleI CACNNNNGTG 2 cut(s) 2361, 2663
Alw21I GWGCWC 3 cut(s) 274, 857, 1339
Alw26I GTCTC 6 cut(s) 481, 1078, 1774, 2495, 3302, 3679
AlwI GGATC 9 cut(s) 83, 437, 725, 1456, 1750, 2599, 3577, 4001, 4014
AlwNI CAGNNNCTG 1 cut(s) 2036
Ama87I CYCGRG 1 cut(s) 2271
Aor13HI TCCGGA 1 cut(s) 2474
AoxI GGCC 5 cut(s) 542, 1027, 2218, 2268, 3701
ApeKI GCWGC 4 cut(s) 1159, 3302, 3479, 3724
ArsI GACNNNNNNTTYG 2 cut(s) 1506, 1538
Asp700I GAANNNNTTC 2 cut(s) 2735, 3453
AspS9I GGNCC 5 cut(s) 62, 1967, 2269, 2558, 4336
AsuC2I CCSGG 1 cut(s) 1344
AsuHPI GGTGA 9 cut(s) 1048, 1069, 1599, 1833, 2213, 2536, 2667, 2729, 3193
AsuII TTCGAA 2 cut(s) 2564, 3413
AsuNHI GCTAGC 1 cut(s) 2776
AvaI CYCGRG 1 cut(s) 2271
AvaII GGWCC 4 cut(s) 62, 1967, 2558, 4336
AxyI CCTNAGG 1 cut(s) 941
BaeI ACNNNNGTAYC 2 cut(s) 2632, 2665
BalI TGGCCA 1 cut(s) 544
BamHI GGATCC 1 cut(s) 4006
BanI GGYRCC 1 cut(s) 1044
BanII GRGCYC 2 cut(s) 857, 4048
BauI CACGAG 2 cut(s) 2399, 3060
BbsI GAAGAC 4 cut(s) 771, 1364, 2156, 2393
Bbv12I GWGCWC 3 cut(s) 274, 857, 1339
BbvCI CCTCAGC 1 cut(s) 584
BbvI GCAGC 4 cut(s) 1171, 3314, 3466, 3711
BceAI ACGGC 2 cut(s) 3179, 4223
BciT130I CCWGG 3 cut(s) 875, 1498, 3522
BciVI GTATCC 3 cut(s) 1655, 1902, 2076
BclI TGATCA 1 cut(s) 2194
BcnI CCSGG 1 cut(s) 1344
BcoDI GTCTC 6 cut(s) 481, 1078, 1774, 2495, 3302, 3679
BcuI ACTAGT 2 cut(s) 379, 2870
BfmI CTRYAG 1 cut(s) 2281
BfuI GTATCC 3 cut(s) 1655, 1902, 2076
BisI GCNGC 5 cut(s) 1160, 2343, 3303, 3480, 3725
BlpI GCTNAGC 1 cut(s) 3950
BlsI GCNGC 5 cut(s) 1161, 2344, 3304, 3481, 3726
BmcAI AGTACT 1 cut(s) 1678
Bme1390I CCNGG 4 cut(s) 875, 1344, 1498, 3522
Bme18I GGWCC 4 cut(s) 62, 1967, 2558, 4336
BmeT110I CYCGRG 1 cut(s) 2271
BmgT120I GGNCC 5 cut(s) 62, 1967, 2269, 2558, 4336
BmiI GGNNCC 6 cut(s) 1046, 1262, 2053, 3015, 4008, 4305
BmrFI CCNGG 4 cut(s) 875, 1344, 1498, 3522
BmrI ACTGGG 1 cut(s) 1411
BmtI GCTAGC 1 cut(s) 2780
BmuI ACTGGG 1 cut(s) 1411
BpiI GAAGAC 4 cut(s) 771, 1364, 2156, 2393
BpmI CTGGAG 1 cut(s) 3504
Bpu10I CCTNAGC 2 cut(s) 584, 695
Bpu1102I GCTNAGC 1 cut(s) 3950
Bpu14I TTCGAA 2 cut(s) 2564, 3413
BpuEI CTTGAG 7 cut(s) 807, 841, 1087, 1882, 3719, 3755, 3948
BpuMI CCSGG 1 cut(s) 1344
Bsa29I ATCGAT 1 cut(s) 4221
BsaHI GRCGYC 1 cut(s) 4236
BsaI GGTCTC 3 cut(s) 481, 1774, 3679
BsaWI WCCGGW 3 cut(s) 2474, 2587, 3585
BsaXI ACNNNNNCTCC 8 cut(s) 742, 772, 824, 854, 1707, 1737, 3268, 3298
Bsc4I CCNNNNNNNGG 8 cut(s) 59, 71, 843, 844, 1765, 2614, 3710, 3884
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 8 cut(s) 283, 545, 1417, 1604, 1970, 2526, 3768, 4365
Bse21I CCTNAGG 1 cut(s) 941
Bse3DI GCAATG 2 cut(s) 688, 1283
BseAI TCCGGA 1 cut(s) 2474
BseBI CCWGG 3 cut(s) 875, 1498, 3522
BseCI ATCGAT 1 cut(s) 4221
BseGI GGATG 5 cut(s) 227, 1608, 2377, 2732, 3957
BseLI CCNNNNNNNGG 8 cut(s) 59, 71, 843, 844, 1765, 2614, 3710, 3884
BseMI GCAATG 2 cut(s) 688, 1283
BseNI ACTGG 8 cut(s) 283, 545, 1417, 1604, 1970, 2526, 3768, 4365
BseRI GAGGAG 3 cut(s) 957, 1022, 2630
BseXI GCAGC 4 cut(s) 1171, 3314, 3466, 3711
BseYI CCCAGC 2 cut(s) 1199, 4136
BsgI GTGCAG 2 cut(s) 106, 2343
BshFI GGCC 5 cut(s) 544, 1029, 2220, 2270, 3703
BshNI GGYRCC 1 cut(s) 1044
BshVI ATCGAT 1 cut(s) 4221
BsiHKAI GWGCWC 3 cut(s) 274, 857, 1339
BsiHKCI CYCGRG 1 cut(s) 2271
BsiSI CCGG 5 cut(s) 687, 1343, 2475, 2588, 3586
BslFI GGGAC 8 cut(s) 820, 1399, 1578, 1646, 2107, 2669, 2973, 3814
BslI CCNNNNNNNGG 8 cut(s) 59, 71, 843, 844, 1765, 2614, 3710, 3884
BsmAI GTCTC 6 cut(s) 481, 1078, 1774, 2495, 3302, 3679
BsmFI GGGAC 8 cut(s) 820, 1399, 1578, 1646, 2107, 2669, 2973, 3814
BsmI GAATGC 7 cut(s) 516, 935, 1675, 2533, 3421, 3727, 4280
BsnI GGCC 5 cut(s) 544, 1029, 2220, 2270, 3703
Bso31I GGTCTC 3 cut(s) 481, 1774, 3679
BsoBI CYCGRG 1 cut(s) 2271
Bsp119I TTCGAA 2 cut(s) 2564, 3413
Bsp1286I GDGCHC 4 cut(s) 274, 857, 1339, 4048
Bsp13I TCCGGA 1 cut(s) 2474
Bsp1407I TGTACA 1 cut(s) 24
Bsp1720I GCTNAGC 1 cut(s) 3950
Bsp19I CCATGG 3 cut(s) 58, 1253, 3204
BspACI CCGC 3 cut(s) 2343, 3834, 3885
BspANI GGCC 5 cut(s) 544, 1029, 2220, 2270, 3703
BspDI ATCGAT 1 cut(s) 4221
BspEI TCCGGA 1 cut(s) 2474
BspHI TCATGA 2 cut(s) 598, 1422
BspLI GGNNCC 6 cut(s) 1046, 1262, 2053, 3015, 4008, 4305
BspOI GCTAGC 1 cut(s) 2780
BspPI GGATC 9 cut(s) 83, 437, 725, 1456, 1750, 2599, 3577, 4001, 4014
BspT104I TTCGAA 2 cut(s) 2564, 3413
BspT107I GGYRCC 1 cut(s) 1044
BspTNI GGTCTC 3 cut(s) 481, 1774, 3679
BsrDI GCAATG 2 cut(s) 688, 1283
BsrFI RCCGGY 1 cut(s) 686
BsrGI TGTACA 1 cut(s) 24
BsrI ACTGG 8 cut(s) 283, 545, 1417, 1604, 1970, 2526, 3768, 4365
BssAI RCCGGY 1 cut(s) 686
BssNI GRCGYC 1 cut(s) 4236
BssSI CACGAG 2 cut(s) 2399, 3060
BssT1I CCWWGG 7 cut(s) 58, 1024, 1253, 2760, 3204, 3504, 4159
Bst2BI CACGAG 2 cut(s) 2399, 3060
Bst2UI CCWGG 3 cut(s) 875, 1498, 3522
Bst6I CTCTTC 4 cut(s) 164, 1497, 1627, 4172
BstACI GRCGYC 1 cut(s) 4236
BstAPI GCANNNNNTGC 3 cut(s) 1229, 2330, 2339
BstAUI TGTACA 1 cut(s) 24
BstBI TTCGAA 2 cut(s) 2564, 3413
BstC8I GCNNGC 4 cut(s) 2268, 2778, 2841, 4148
BstDSI CCRYGG 3 cut(s) 58, 1253, 3204
BstF5I GGATG 5 cut(s) 227, 1608, 2377, 2732, 3957
BstMAI GTCTC 6 cut(s) 481, 1078, 1774, 2495, 3302, 3679
BstNI CCWGG 3 cut(s) 875, 1498, 3522
BstSCI CCNGG 4 cut(s) 873, 1342, 1496, 3520
BstSFI CTRYAG 1 cut(s) 2281
BstV1I GCAGC 4 cut(s) 1171, 3314, 3466, 3711
BstV2I GAAGAC 4 cut(s) 771, 1364, 2156, 2393
BstX2I RGATCY 2 cut(s) 1461, 4006
BstXI CCANNNNNNTGG 2 cut(s) 874, 3699
BstYI RGATCY 2 cut(s) 1461, 4006
Bsu15I ATCGAT 1 cut(s) 4221
Bsu36I CCTNAGG 1 cut(s) 941
BsuI GTATCC 3 cut(s) 1655, 1902, 2076
BsuRI GGCC 5 cut(s) 544, 1029, 2220, 2270, 3703
BsuTUI ATCGAT 1 cut(s) 4221
BtgI CCRYGG 3 cut(s) 58, 1253, 3204
BtsCI GGATG 5 cut(s) 227, 1608, 2377, 2732, 3957
BtsI GCAGTG 2 cut(s) 2337, 2653
BtsIMutI CAGTG 8 cut(s) 552, 2326, 2337, 2653, 2688, 2920, 3761, 4287
Cac8I GCNNGC 4 cut(s) 2268, 2778, 2841, 4148
CaiI CAGNNNCTG 1 cut(s) 2036
CciI TCATGA 2 cut(s) 598, 1422
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 5 cut(s) 62, 1967, 2269, 2558, 4336
ClaI ATCGAT 1 cut(s) 4221
CseI GACGC 2 cut(s) 3231, 4244
CsiI ACCWGGT 1 cut(s) 873
Csp6I GTAC 5 cut(s) 25, 864, 1677, 2951, 3370
CviQI GTAC 5 cut(s) 25, 864, 1677, 2951, 3370
DraI TTTAAA 1 cut(s) 3343
DraIII CACNNNGTG 1 cut(s) 2915
EaeI YGGCCR 1 cut(s) 542
Eam1104I CTCTTC 4 cut(s) 164, 1497, 1627, 4172
EarI CTCTTC 4 cut(s) 164, 1497, 1627, 4172
Ecl136II GAGCTC 1 cut(s) 855
Eco130I CCWWGG 7 cut(s) 58, 1024, 1253, 2760, 3204, 3504, 4159
Eco147I AGGCCT 1 cut(s) 1029
Eco24I GRGCYC 2 cut(s) 857, 4048
Eco31I GGTCTC 3 cut(s) 481, 1774, 3679
Eco32I GATATC 1 cut(s) 2296
Eco47I GGWCC 4 cut(s) 62, 1967, 2558, 4336
Eco53kI GAGCTC 1 cut(s) 855
Eco57I CTGAAG 4 cut(s) 783, 1385, 4085, 4196
Eco81I CCTNAGG 1 cut(s) 941
Eco88I CYCGRG 1 cut(s) 2271
EcoICRI GAGCTC 1 cut(s) 855
EcoO109I RGGNCCY 1 cut(s) 2558
EcoRI GAATTC 1 cut(s) 1544
EcoRII CCWGG 3 cut(s) 873, 1496, 3520
EcoRV GATATC 1 cut(s) 2296
EcoT14I CCWWGG 7 cut(s) 58, 1024, 1253, 2760, 3204, 3504, 4159
EcoT22I ATGCAT 1 cut(s) 985
EcoT38I GRGCYC 2 cut(s) 857, 4048
ErhI CCWWGG 7 cut(s) 58, 1024, 1253, 2760, 3204, 3504, 4159
FaqI GGGAC 8 cut(s) 820, 1399, 1578, 1646, 2107, 2669, 2973, 3814
FauNDI CATATG 1 cut(s) 67
FbaI TGATCA 1 cut(s) 2194
FblI GTMKAC 1 cut(s) 4084
Fnu4HI GCNGC 5 cut(s) 1160, 2343, 3303, 3480, 3725
FokI GGATG 5 cut(s) 214, 1615, 2384, 2739, 3944
FriOI GRGCYC 2 cut(s) 857, 4048
Fsp4HI GCNGC 5 cut(s) 1160, 2343, 3303, 3480, 3725
GluI GCNGC 5 cut(s) 1160, 2343, 3303, 3480, 3725
GsaI CCCAGC 2 cut(s) 1203, 4140
GsuI CTGGAG 1 cut(s) 3504
HaeIII GGCC 5 cut(s) 544, 1029, 2220, 2270, 3703
HapII CCGG 5 cut(s) 687, 1343, 2475, 2588, 3586
HgaI GACGC 2 cut(s) 3231, 4244
Hin1I GRCGYC 1 cut(s) 4236
HincII GTYRAC 4 cut(s) 1213, 2434, 2940, 3385
HindII GTYRAC 4 cut(s) 1213, 2434, 2940, 3385
HindIII AAGCTT 2 cut(s) 1832, 2160
HpaI GTTAAC 1 cut(s) 1213
HpaII CCGG 5 cut(s) 687, 1343, 2475, 2588, 3586
HphI GGTGA 9 cut(s) 1048, 1069, 1599, 1833, 2213, 2536, 2667, 2729, 3193
Hpy166II GTNNAC 9 cut(s) 25, 487, 901, 1213, 1967, 2434, 2940, 3385, 4085
Hpy8I GTNNAC 9 cut(s) 25, 487, 901, 1213, 1967, 2434, 2940, 3385, 4085
HpyCH4IV ACGT 1 cut(s) 3356
HpySE526I ACGT 1 cut(s) 3356
Hsp92I GRCGYC 1 cut(s) 4236
Kpn2I TCCGGA 1 cut(s) 2474
Ksp22I TGATCA 1 cut(s) 2194
KspAI GTTAAC 1 cut(s) 1213
LmnI GCTCC 9 cut(s) 763, 1275, 1707, 1976, 2452, 3019, 3289, 3523, 3763
Lsp1109I GCAGC 4 cut(s) 1171, 3314, 3466, 3711
MabI ACCWGGT 1 cut(s) 873
MaeII ACGT 1 cut(s) 3356
MfeI CAATTG 1 cut(s) 948
MflI RGATCY 2 cut(s) 1461, 4006
MhlI GDGCHC 4 cut(s) 274, 857, 1339, 4048
MlsI TGGCCA 1 cut(s) 544
MluNI TGGCCA 1 cut(s) 544
MlyI GAGTC 9 cut(s) 842, 1079, 1094, 2398, 2497, 2627, 3026, 3460, 4176
MmeI TCCRAC 4 cut(s) 339, 1954, 2704, 4331
Mox20I TGGCCA 1 cut(s) 544
Mph1103I ATGCAT 1 cut(s) 985
MroI TCCGGA 1 cut(s) 2474
MroXI GAANNNNTTC 2 cut(s) 2735, 3453
MscI TGGCCA 1 cut(s) 544
MslI CAYNNNNRTG 7 cut(s) 1037, 2361, 2538, 2663, 3414, 3697, 4331
Msp20I TGGCCA 1 cut(s) 544
MspA1I CMGCKG 7 cut(s) 20, 1162, 1199, 2266, 3885, 4063, 4150
MspI CCGG 5 cut(s) 687, 1343, 2475, 2588, 3586
MspR9I CCNGG 4 cut(s) 875, 1344, 1498, 3522
MunI CAATTG 1 cut(s) 948
Mva1269I GAATGC 7 cut(s) 516, 935, 1675, 2533, 3421, 3727, 4280
MvaI CCWGG 3 cut(s) 875, 1498, 3522
NciI CCSGG 1 cut(s) 1344
NcoI CCATGG 3 cut(s) 58, 1253, 3204
NdeI CATATG 1 cut(s) 67
NheI GCTAGC 1 cut(s) 2776
NlaIV GGNNCC 6 cut(s) 1046, 1262, 2053, 3015, 4008, 4305
NmeAIII GCCGAG 3 cut(s) 458, 1030, 3331
NmuCI GTSAC 6 cut(s) 1605, 2401, 3169, 3325, 3463, 4322
NsiI ATGCAT 1 cut(s) 985
NspV TTCGAA 2 cut(s) 2564, 3413
OliI CACNNNNGTG 2 cut(s) 2361, 2663
PagI TCATGA 2 cut(s) 598, 1422
PceI AGGCCT 1 cut(s) 1029
PctI GAATGC 7 cut(s) 516, 935, 1675, 2533, 3421, 3727, 4280
PdmI GAANNNNTTC 2 cut(s) 2735, 3453
PflFI GACNNNGTC 1 cut(s) 4328
PkrI GCNGC 5 cut(s) 1161, 2344, 3304, 3481, 3726
PleI GAGTC 9 cut(s) 841, 1078, 1094, 2398, 2496, 2626, 3026, 3460, 4175
PpsI GAGTC 9 cut(s) 841, 1078, 1094, 2398, 2496, 2626, 3026, 3460, 4175
PpuMI RGGWCCY 1 cut(s) 2558
PsiI TTATAA 2 cut(s) 3440, 3851
Psp124BI GAGCTC 1 cut(s) 857
Psp5II RGGWCCY 1 cut(s) 2558
Psp6I CCWGG 3 cut(s) 873, 1496, 3520
PspFI CCCAGC 2 cut(s) 1199, 4136
PspGI CCWGG 3 cut(s) 873, 1496, 3520
PspN4I GGNNCC 6 cut(s) 1046, 1262, 2053, 3015, 4008, 4305
PspPI GGNCC 5 cut(s) 62, 1967, 2269, 2558, 4336
PspPPI RGGWCCY 1 cut(s) 2558
PstNI CAGNNNCTG 1 cut(s) 2036
PsuI RGATCY 2 cut(s) 1461, 4006
PsyI GACNNNGTC 1 cut(s) 4328
PvuII CAGCTG 6 cut(s) 20, 1162, 1199, 2266, 4063, 4150
RsaI GTAC 5 cut(s) 26, 865, 1678, 2952, 3371
RsaNI GTAC 5 cut(s) 25, 864, 1677, 2951, 3370
RseI CAYNNNNRTG 7 cut(s) 1037, 2361, 2538, 2663, 3414, 3697, 4331
SacI GAGCTC 1 cut(s) 857
SatI GCNGC 5 cut(s) 1160, 2343, 3303, 3480, 3725
Sau96I GGNCC 5 cut(s) 62, 1967, 2269, 2558, 4336
ScaI AGTACT 1 cut(s) 1678
SchI GAGTC 9 cut(s) 842, 1079, 1094, 2398, 2497, 2627, 3026, 3460, 4176
ScrFI CCNGG 4 cut(s) 875, 1344, 1498, 3522
SduI GDGCHC 4 cut(s) 274, 857, 1339, 4048
SexAI ACCWGGT 1 cut(s) 873
SfcI CTRYAG 1 cut(s) 2281
SfuI TTCGAA 2 cut(s) 2564, 3413
SinI GGWCC 4 cut(s) 62, 1967, 2558, 4336
SmiMI CAYNNNNRTG 7 cut(s) 1037, 2361, 2538, 2663, 3414, 3697, 4331
SmlI CTYRAG 7 cut(s) 822, 856, 1102, 1861, 3734, 3770, 3963
SmoI CTYRAG 7 cut(s) 822, 856, 1102, 1861, 3734, 3770, 3963
SpeI ACTAGT 2 cut(s) 379, 2870
SseBI AGGCCT 1 cut(s) 1029
SsiI CCGC 3 cut(s) 2343, 3834, 3885
SstI GAGCTC 1 cut(s) 857
StuI AGGCCT 1 cut(s) 1029
StyD4I CCNGG 4 cut(s) 873, 1342, 1496, 3520
StyI CCWWGG 7 cut(s) 58, 1024, 1253, 2760, 3204, 3504, 4159
TaiI ACGT 1 cut(s) 3359
TaqI TCGA 8 cut(s) 1068, 1534, 2040, 2415, 2564, 3413, 4221, 4387
TatI WGTACW 3 cut(s) 24, 1676, 2950
TauI GCSGC 1 cut(s) 2345
TscAI CASTG 8 cut(s) 552, 2326, 2344, 2653, 2688, 2920, 3768, 4287
TseFI GTSAC 6 cut(s) 1605, 2401, 3169, 3325, 3463, 4322
TseI GCWGC 4 cut(s) 1159, 3302, 3479, 3724
Tsp45I GTSAC 6 cut(s) 1605, 2401, 3169, 3325, 3463, 4322
TspRI CASTG 8 cut(s) 552, 2326, 2344, 2653, 2688, 2920, 3768, 4287
Tth111I GACNNNGTC 1 cut(s) 4328
VpaK11BI GGWCC 4 cut(s) 62, 1967, 2558, 4336
XbaI TCTAGA 2 cut(s) 2972, 4048
XcmI CCANNNNNNNNNTGG 1 cut(s) 3696
XmiI GTMKAC 1 cut(s) 4084
XmnI GAANNNNTTC 2 cut(s) 2735, 3453
ZrmI AGTACT 1 cut(s) 1678
Zsp2I ATGCAT 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.