Rh2DG498700

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
71879592 .. 71881044
1453 bp
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UTR
Exon/CDS
Intron
Rh2DG498700.1

Sequence Viewer

Length: 228 bp
ATGCAGATTTCACCTGAGCCTCCGGAAATTGTGGAGGACAATAGGCCACCTTCTTCATGGCCTATGAAGGGTAGGATAGAGCTGTATTCTCTGAATGTTCTAGAGAAGTGTCAGCTCAAGGCAACAGTCAGTAGCCTACCTAATTTTCTGGACTCGTCTGGGAAGCTGGTGGAGTATGAAGAACCCTCAAAGCTCTTGGATACCAATTCCTATCCTCCAAACTTGTAG

Protein Analysis

75

Amino Acids

8.46

Weight (kDa)

4.61

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 22
AfiI CCNNNNNNNGG 1 cut(s) 68
AluBI AGCT 4 cut(s) 82, 115, 166, 193
AluI AGCT 4 cut(s) 82, 115, 166, 193
Aor13HI TCCGGA 1 cut(s) 22
AoxI GGCC 2 cut(s) 44, 59
AsuHPI GGTGA 1 cut(s) 3
BciVI GTATCC 1 cut(s) 193
BfaI CTAG 1 cut(s) 101
BfuI GTATCC 1 cut(s) 193
Bpu10I CCTNAGC 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 101
BsaWI WCCGGW 1 cut(s) 22
Bsc4I CCNNNNNNNGG 1 cut(s) 68
BseAI TCCGGA 1 cut(s) 22
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 6
BshFI GGCC 2 cut(s) 46, 61
BsiSI CCGG 1 cut(s) 23
BslI CCNNNNNNNGG 1 cut(s) 68
BsnI GGCC 2 cut(s) 46, 61
Bsp13I TCCGGA 1 cut(s) 22
BspANI GGCC 2 cut(s) 46, 61
BspCNI CTCAG 1 cut(s) 7
BspEI TCCGGA 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 127
BstDEI CTNAG 1 cut(s) 15
BsuI GTATCC 1 cut(s) 193
BsuRI GGCC 2 cut(s) 46, 61
CviAII CATG 1 cut(s) 57
CviJI RGCY 8 cut(s) 19, 46, 61, 82, 115, 135, 166, 193
CviKI_1 RGCY 8 cut(s) 19, 46, 61, 82, 115, 135, 166, 193
DdeI CTNAG 1 cut(s) 15
FaeI CATG 1 cut(s) 60
FaiI YATR 3 cut(s) 58, 65, 177
FatI CATG 1 cut(s) 56
FspBI CTAG 1 cut(s) 101
HaeIII GGCC 2 cut(s) 46, 61
HapII CCGG 1 cut(s) 23
Hin1II CATG 1 cut(s) 60
HinfI GANTC 1 cut(s) 152
HpaII CCGG 1 cut(s) 23
HphI GGTGA 1 cut(s) 3
Hpy188I TCNGA 1 cut(s) 93
Hpy188III TCNNGA 3 cut(s) 23, 101, 149
HpyAV CCTTC 2 cut(s) 60, 61
HpyCH4III ACNGT 1 cut(s) 127
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 1 cut(s) 15
Hsp92II CATG 1 cut(s) 60
Kpn2I TCCGGA 1 cut(s) 22
LpnPI CCDG 5 cut(s) 27, 36, 134, 144, 152
MaeI CTAG 1 cut(s) 101
MboII GAAGA 2 cut(s) 45, 191
MluCI AATT 3 cut(s) 27, 142, 205
MlyI GAGTC 1 cut(s) 146
MnlI CCTC 4 cut(s) 28, 30, 196, 225
MroI TCCGGA 1 cut(s) 22
MspI CCGG 1 cut(s) 23
NlaIII CATG 1 cut(s) 60
PleI GAGTC 1 cut(s) 146
PpsI GAGTC 1 cut(s) 146
SchI GAGTC 1 cut(s) 146
SetI ASST 7 cut(s) 16, 52, 84, 117, 142, 168, 195
SmlI CTYRAG 1 cut(s) 116
SmoI CTYRAG 1 cut(s) 116
Sse9I AATT 3 cut(s) 27, 142, 205
SspMI CTAG 1 cut(s) 101
TaaI ACNGT 1 cut(s) 127
TasI AATT 3 cut(s) 27, 142, 205
TspDTI ATGAA 3 cut(s) 45, 80, 192
XbaI TCTAGA 1 cut(s) 100
XcmI CCANNNNNNNNNTGG 1 cut(s) 54
XspI CTAG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.